FURNA

Download all results in tab-seperated text for 29 RNAs.

Click the entry in the '#' column to view structure details of that RNA chain.

Hover over PDB to view the title of the structure.

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Hover over Ligand to view the name of the ligand and the ligand-binding nucleotides on the RNA.

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#	PDB (Resolution)	Length	EC number & GO term	RNAcentral	Rfam	Taxon	PubMed	ATtRACT motif	Ligand & binding nucleotides
1	4v9b:AA (3.1Å)	1506	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS000080DEDF	RF00177 RF01959 RF01960	Thermus thermophilus HB8 300852	23431179		Assembly1 T1C:AA:1837 1054,1195~1198
2	4v9b:CA (3.1Å)	1506	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS000080DEDF	RF00177 RF01959 RF01960	Thermus thermophilus HB8 300852	23431179		Assembly2 T1C:CA:1800 966,1054,1195,1197~1198
3	4yhh:A (3.417Å)	1507	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS00008116AF	RF00177 RF01959 RF01960	Thermus thermophilus HB8 300852	25753625		Assembly1 T1C:A:1601 965,1054,1195,1197~1198
4	5j8a:AA (3.1Å)	1534	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS0000A7637F	RF00177 RF01959 RF01960	Escherichia coli 562	27382179		Assembly1 T1C:AA:1680 1054,1195,1197~1198
5	5j8a:BA (3.1Å)	1533	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS0000A7637F	RF00177 RF01959 RF01960	Escherichia coli 562	27382179		Assembly2 T1C:BA:1643 1054,1195,1197~1198
6	5j91:AA (2.96Å)	1534	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS000081169C	RF00177 RF01959 RF01960	Escherichia coli 562	27382179		Assembly1 T1C:AA:1677 1054,1197~1198
7	5j91:BA (2.96Å)	1533	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS000081169C	RF00177 RF01959 RF01960	Escherichia coli 562	27382179		Assembly2 T1C:BA:1643 966,1054,1197~1198
8	6ysi:1 (2.5Å)	2672	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS0000211949	RF02540 RF02541	Acinetobacter baumannii ATCC 19606 = CIP 70.34 = JCM 6841 575584	32857965		Assembly1 T1C:1:3160 2307,2309,2322
9	6ysi:5 (2.5Å)	115	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS0000143D25	RF00001	Acinetobacter baumannii ATCC 19606 = CIP 70.34 = JCM 6841 575584	32857965		Assembly1 T1C:5:205 12,15~16
10	6ytf:3 (3.0Å)	453	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS00007DA5A6	RF00177 RF01959 RF01960	Acinetobacter baumannii ATCC 19606 = CIP 70.34 = JCM 6841 575584	32857965		Assembly1 T1C:3:1624 1051,1192,1194~1195
11	8k2a:L1 (2.9Å)	1500	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	N/A	RF02541	Homo sapiens 9606	38942792	591 590 M269_0.6 1165 1328 1228 M019_0.6 175 1199 693 M106_0.6 156 1191 1075 M161_0.6 43 M111_0.6 1271 1395 M272_0.6 M013_0.6 M081_0.6 994 996 M087_0.6 1310 1353 1334 M148_0.6 1239 M350_0.6 s93 74 161 104 M043_0.6 800 s25 33 1187 M088_0.6 1289 s44 1364 s41 1100 1246 1385 687 M016_0.6 s60	Assembly1 T1C:L1:1706 832,1055~1056,1402~1403,1426 T1C:L1:1707 934,957~958,1420
12	8k2a:S1 (2.9Å)	928	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS00021ED90F	RF00177	Homo sapiens 9606	38942792	590 1321 886 1302 156 1207 M027_0.6 979 M089_0.6 82 495 399 M164_0.6 s44 M106_0.6 M033_0.6 1194 1197 1196 938 M142_0.6 509 1290 1393 M329_0.6 994 1216 1312 1316 1273 s14 120 M047_0.6 M169_0.6 M274_0.6 93 1354 78 17 1186 M331_0.6 1241 M143_0.6 1364 800 33	Assembly1 T1C:S1:1034 612,680~681 T1C:S1:1035 10~11,834
13	8k2b:L1 (3.4Å)	1500	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	N/A	RF02541	Homo sapiens 9606	38942792	591 590 M269_0.6 1165 1328 1228 M019_0.6 175 1199 693 M106_0.6 156 1191 1075 M161_0.6 43 M111_0.6 1271 1395 M272_0.6 M013_0.6 M081_0.6 994 996 M087_0.6 1310 1353 1334 M148_0.6 1239 M350_0.6 s93 74 161 104 M043_0.6 800 s25 33 1187 M088_0.6 1289 s44 1364 s41 1100 1246 1385 687 M016_0.6 s60	Assembly1 T1C:L1:1692 832,1055,1323,1403
14	8k2c:L5 (2.4Å)	3771	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	N/A	RF02543	Homo sapiens 9606	38942792	M054_0.6 1306 769 706 1303 762 763 1148 1149 764 870 167 21 1079 930 1029 1075 1072 1073 M104_0.6 1071 819 1373 938 546 s52 s51 s50 931 813 936 s59 995 994 595 1314 991 1312 1311 1028 1150 673 123 124 125 1068 1017 1060 s100 s102 52 533 M227_0.6 1384 375 926 822 1128 988 1321 708 704 705 1328 707 1124 987 1126 703 M077_0.6 1237 83 1181 797 796 795 836 837 791 727 838 1334 s70 1016 s72 1393 610 1012 1013 1236 M290_0.6 1231 1232 1233 1335 s17 M109_0.6 1336 1331 1239 1333 589 M273_0.6 s99 1389 902 821 900 901 906 905 33 s48 853 M102_0.6 924 M044_0.6 1245 s62 s96 1227 883 M035_0.6 1223 M156_0.6 604 M320_0.6 1347 60 s81 M349_0.6 1083 175 100 42 s61 977 976 974 852 970 M154_0.6 884 s55 979 M153_0.6 183 1238 185 1375 1036 503 1034 1035 1212 1043 1211 1216 1042 986 467 M148_0.6 1354 M103_0.6 169 91 1127 162 M070_0.6 1026 M020_0.6 M050_0.6 1187 1182 815 1037 1107 M347_0.6 722 935 M086_0.6 1164 1165 1166 606 886 156 748 749 608 s77 M061_0.6 958 1055 878 879 1059 953 952 872 954 957 M272_0.6 1352 774 1215 776 1173 770 773 1183 1271 1272 1273 779 778 1178 M151_0.6 78 1285 M083_0.6 1041 1040 1045 1044 790 1288 354 688 1360 684 800 1368 804	Assembly1 T1C:L5:5312 3735,4069~4071 T1C:L5:5313 3711,3736 T1C:L5:5314 2504~2505,2507 T1C:L5:5315 188,245~246,1365~1366 T1C:L5:5316 181,254 T1C:L5:5317 180,182,255~256 T1C:L5:5318 252~254
15	8k2c:S2 (2.4Å)	1740	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS00021ED8E3	RF01960 RF02542 RF01959 RF00177	Homo sapiens 9606	38942792	1303 1263 872 1149 1267 764 954 957 692 1079 1075 1072 1073 819 346 546 1378 930 936 935 M296_0.6 1314 M141_0.6 1068 s72 M147_0.6 1060 s102 1384 1386 M016_0.6 s48 926 822 1128 1323 988 595 1327 707 986 796 836 762 790 838 1124 1017 1393 1392 1390 1236 1335 1334 M109_0.6 1238 M273_0.6 s14 445 s99 1311 105 902 900 905 821 788 1333 924 1244 s62 s96 M074_0.6 335 60 1167 977 976 974 852 970 509 1037 1035 1213 756 639 M148_0.6 786 1355 M065_0.6 93 167 M070_0.6 813 M050_0.6 1188 1022 1187 1029 815 727 722 883 604 606 884 749 779 608 996 M037_0.6 1055 878 1059 952 1195 43 870 1380 325 758 770 610 1274 1042 M127_0.6 s24 s61 804	Assembly1 T1C:S2:1930 1221~1222,1677
16	8k2d:C1 (3.2Å)	3188	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	N/A	RF02543	Saccharomyces cerevisiae 4932	38942792	M107_0.6 M080_0.6 M299_0.6 16	Assembly1 T1C:C1:3401 2207,2508 T1C:C1:3402 2508~2509 T1C:C1:3403 2205~2209 T1C:C1:3404 181~182,332~333 T1C:C1:3405 980~981,1064~1065,1093,1096 T1C:C1:3406 737~738,979~981
17	8k82:C1 (3.0Å)	3204	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	N/A	RF02543	Saccharomyces cerevisiae 4932	38942792	M107_0.6 M080_0.6 M299_0.6 16	Assembly1 T1C:C1:3402 2207,2231 T1C:C1:3403 181~182,332~333 T1C:C1:3404 980~981,1064~1065,1093,1096 T1C:C1:3405 738,979~981
18	8k82:C2 (3.0Å)	1771	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	N/A	RF01960 RF02542 RF01959 RF00177	Saccharomyces cerevisiae 4932	38942792	101 441 M080_0.6 386 M107_0.6 497 490	Assembly1 T1C:C2:1990 1274~1275,1427~1429
19	8xsx:L5 (2.4Å)	3771	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	N/A	RF02543	Homo sapiens 9606	38942792	M054_0.6 1306 769 706 1303 762 763 1148 1149 764 870 167 21 1079 930 1029 1075 1072 1073 M104_0.6 1071 819 1373 938 546 s52 s51 s50 931 813 936 s59 995 994 595 1314 991 1312 1311 1028 1150 673 123 124 125 1068 1017 1060 s100 s102 52 533 M227_0.6 1384 375 926 822 1128 988 1321 708 704 705 1328 707 1124 987 1126 703 M077_0.6 1237 83 1181 797 796 795 836 837 791 727 838 1334 s70 1016 s72 1393 610 1012 1013 1236 M290_0.6 1231 1232 1233 1335 s17 M109_0.6 1336 1331 1239 1333 589 M273_0.6 s99 1389 902 821 900 901 906 905 33 s48 853 M102_0.6 924 M044_0.6 1245 s62 s96 1227 883 M035_0.6 1223 M156_0.6 604 M320_0.6 1347 60 s81 M349_0.6 1083 175 100 42 s61 977 976 974 852 970 M154_0.6 884 s55 979 M153_0.6 183 1238 185 1375 1036 503 1034 1035 1212 1043 1211 1216 1042 986 467 M148_0.6 1354 M103_0.6 169 91 1127 162 M070_0.6 1026 M020_0.6 M050_0.6 1187 1182 815 1037 1107 M347_0.6 722 935 M086_0.6 1164 1165 1166 606 886 156 748 749 608 s77 M061_0.6 958 1055 878 879 1059 953 952 872 954 957 M272_0.6 1352 774 1215 776 1173 770 773 1183 1271 1272 1273 779 778 1178 M151_0.6 78 1285 M083_0.6 1041 1040 1045 1044 790 1288 354 688 1360 684 800 1368 804	Assembly1 T1C:L5:5313 2453,2504~2505,2507 T1C:L5:5314 186,188,245~246,1366 T1C:L5:5315 181,254 T1C:L5:5316 179~182,255~256 T1C:L5:5317 252~254
20	8xsy:L5 (3.0Å)	3771	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	N/A	RF02543	Homo sapiens 9606	38942792	M054_0.6 1306 769 706 1303 762 763 1148 1149 764 870 167 21 1079 930 1029 1075 1072 1073 M104_0.6 1071 819 1373 938 546 s52 s51 s50 931 813 936 s59 995 994 595 1314 991 1312 1311 1028 1150 673 123 124 125 1068 1017 1060 s100 s102 52 533 M227_0.6 1384 375 926 822 1128 988 1321 708 704 705 1328 707 1124 987 1126 703 M077_0.6 1237 83 1181 797 796 795 836 837 791 727 838 1334 s70 1016 s72 1393 610 1012 1013 1236 M290_0.6 1231 1232 1233 1335 s17 M109_0.6 1336 1331 1239 1333 589 M273_0.6 s99 1389 902 821 900 901 906 905 33 s48 853 M102_0.6 924 M044_0.6 1245 s62 s96 1227 883 M035_0.6 1223 M156_0.6 604 M320_0.6 1347 60 s81 M349_0.6 1083 175 100 42 s61 977 976 974 852 970 M154_0.6 884 s55 979 M153_0.6 183 1238 185 1375 1036 503 1034 1035 1212 1043 1211 1216 1042 986 467 M148_0.6 1354 M103_0.6 169 91 1127 162 M070_0.6 1026 M020_0.6 M050_0.6 1187 1182 815 1037 1107 M347_0.6 722 935 M086_0.6 1164 1165 1166 606 886 156 748 749 608 s77 M061_0.6 958 1055 878 879 1059 953 952 872 954 957 M272_0.6 1352 774 1215 776 1173 770 773 1183 1271 1272 1273 779 778 1178 M151_0.6 78 1285 M083_0.6 1041 1040 1045 1044 790 1288 354 688 1360 684 800 1368 804	Assembly1 T1C:L5:5311 3711,3735,4069~4071 T1C:L5:5312 3711,3736,4070 T1C:L5:5313 2504,2507 T1C:L5:5314 188,245~246,1366 T1C:L5:5315 179~182,254 T1C:L5:5316 180~182,255~256 T1C:L5:5317 253~254
21	8xsz:L5 (3.2Å)	3668	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	N/A	RF02543	Homo sapiens 9606	38942792	M054_0.6 1306 769 706 1303 762 42 1148 1149 764 870 167 21 1079 930 1029 1075 1072 1073 s77 1071 819 1373 938 546 s52 s51 s50 931 813 936 s59 995 994 595 1314 991 1312 1311 1028 1150 673 123 124 125 1068 s72 1060 s100 s102 52 533 M227_0.6 1384 375 926 822 1128 988 1321 708 704 705 1328 707 1124 987 1126 703 M077_0.6 1237 83 1181 797 796 795 836 837 791 790 838 1334 s70 1016 1017 1393 610 1012 1013 1236 M290_0.6 763 1231 1232 1233 1335 s17 M109_0.6 1336 1331 1239 1333 589 776 M273_0.6 s99 1389 902 821 900 901 906 905 33 s48 853 924 M044_0.6 1245 s62 s96 1227 883 M035_0.6 1223 M156_0.6 604 M320_0.6 1347 60 s81 M349_0.6 1083 175 1026 100 s61 977 976 974 852 970 M154_0.6 884 s55 979 M153_0.6 183 1238 185 1375 1036 503 1034 1035 1212 M102_0.6 1211 1216 1042 986 467 M148_0.6 1354 M103_0.6 169 91 1127 162 M070_0.6 M272_0.6 M020_0.6 M050_0.6 1187 1182 815 1037 727 M347_0.6 722 935 M086_0.6 1164 1165 1166 606 886 156 748 749 608 M061_0.6 958 1055 878 879 1059 953 952 872 954 957 1107 1352 774 1215 M104_0.6 1173 770 773 1183 1271 1272 1273 779 778 1178 M151_0.6 78 1285 M083_0.6 1041 1040 1043 1045 1044 1288 354 688 1360 684 800 1368	Assembly1 T1C:L5:5310 2504,2507 T1C:L5:5311 188,245~246,1366 T1C:L5:5313 180~182,255~256 T1C:L5:5314 252~254
22	8xt0:L1 (3.2Å)	1500	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	N/A	RF02541	Homo sapiens 9606	38942792	591 590 M269_0.6 1165 1328 1228 M019_0.6 175 1199 693 M106_0.6 156 1191 1075 M161_0.6 43 M111_0.6 1271 1395 M272_0.6 M013_0.6 M081_0.6 994 996 M087_0.6 1310 1353 1334 M148_0.6 1239 M350_0.6 s93 74 161 104 M043_0.6 800 s25 33 1187 M088_0.6 1289 s44 1364 s41 1100 1246 1385 687 M016_0.6 s60	Assembly1 T1C:L1:1707 832,1055,1323,1402~1403,1426 T1C:L1:1708 934,957~958
23	8xt0:S1 (3.2Å)	928	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS00021ED90F	RF00177	Homo sapiens 9606	38942792	590 1321 886 1302 156 1207 M027_0.6 979 M089_0.6 82 495 399 M164_0.6 s44 M106_0.6 M033_0.6 1194 1197 1196 938 M142_0.6 509 1290 1393 M329_0.6 994 1216 1312 1316 1273 s14 120 M047_0.6 M169_0.6 M274_0.6 93 1354 78 17 1186 M331_0.6 1241 M143_0.6 1364 800 33	Assembly1 T1C:S1:1034 612,680~681
24	8xt1:L1 (3.1Å)	1500	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	N/A	RF02541	Homo sapiens 9606	38942792	591 590 M269_0.6 1165 1328 1228 M019_0.6 175 1199 693 M106_0.6 156 1191 1075 M161_0.6 43 M111_0.6 1271 1395 M272_0.6 M013_0.6 M081_0.6 994 996 M087_0.6 1310 1353 1334 M148_0.6 1239 M350_0.6 s93 74 161 104 M043_0.6 800 s25 33 1187 M088_0.6 1289 s44 1364 s41 1100 1246 1385 687 M016_0.6 s60	Assembly1 T1C:L1:1690 832,1055,1323,1403,1426
25	8xt2:L1 (3.3Å)	1500	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	N/A	RF02541	Homo sapiens 9606	38942792	591 590 M269_0.6 1165 1328 1228 M019_0.6 175 1199 693 M106_0.6 156 1191 1075 M161_0.6 43 M111_0.6 1271 1395 M272_0.6 M013_0.6 M081_0.6 994 996 M087_0.6 1310 1353 1334 M148_0.6 1239 M350_0.6 s93 74 161 104 M043_0.6 800 s25 33 1187 M088_0.6 1289 s44 1364 s41 1100 1246 1385 687 M016_0.6 s60	Assembly1 T1C:L1:1705 1055~1056,1402~1403,1426 T1C:L1:1706 934,957~958,1420
26	8xt2:S1 (3.3Å)	928	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS00021ED90F	RF00177	Homo sapiens 9606	38942792	590 1321 886 1302 156 1207 M027_0.6 979 M089_0.6 82 495 399 M164_0.6 s44 M106_0.6 M033_0.6 1194 1197 1196 938 M142_0.6 509 1290 1393 M329_0.6 994 1216 1312 1316 1273 s14 120 M047_0.6 M169_0.6 M274_0.6 93 1354 78 17 1186 M331_0.6 1241 M143_0.6 1364 800 33	Assembly1 T1C:S1:1034 612,680
27	8xt3:L1 (3.1Å)	1500	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	N/A	RF02541	Homo sapiens 9606	38942792	591 590 M269_0.6 1165 1328 1228 M019_0.6 175 1199 693 M106_0.6 156 1191 1075 M161_0.6 43 M111_0.6 1271 1395 M272_0.6 M013_0.6 M081_0.6 994 996 M087_0.6 1310 1353 1334 M148_0.6 1239 M350_0.6 s93 74 161 104 M043_0.6 800 s25 33 1187 M088_0.6 1289 s44 1364 s41 1100 1246 1385 687 M016_0.6 s60	Assembly1 T1C:L1:1691 832,1055,1323,1403,1426
28	8yoo:L5 (2.0Å)	3670	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	N/A	RF02543	Homo sapiens 9606	38942792	M054_0.6 1306 769 706 1303 762 42 1148 1149 764 870 167 21 1079 930 1029 1075 1072 1073 s77 1071 819 1373 938 546 s52 s51 s50 931 813 936 s59 995 994 595 1314 991 1312 1311 1028 1150 673 123 124 125 1068 s72 1060 s100 s102 52 533 M227_0.6 1384 375 926 822 1128 988 1321 708 704 705 1328 707 1124 987 1126 703 M077_0.6 1237 83 1181 797 796 795 836 837 791 790 838 1334 s70 1016 1017 1393 610 1012 1013 1236 M290_0.6 763 1231 1232 1233 1335 s17 M109_0.6 1336 1331 1239 1333 589 776 M273_0.6 s99 1389 902 821 900 901 906 905 33 s48 853 924 M044_0.6 1245 s62 s96 1227 883 M035_0.6 1223 M156_0.6 604 M320_0.6 1347 60 s81 M349_0.6 1083 175 1026 100 s61 977 976 974 852 970 M154_0.6 884 s55 979 M153_0.6 183 1238 185 1375 1036 503 1034 1035 1212 M102_0.6 1211 1216 1042 986 467 M148_0.6 1354 M103_0.6 169 91 1127 162 M070_0.6 M272_0.6 M020_0.6 M050_0.6 1187 1182 815 1037 727 M347_0.6 722 935 M086_0.6 1164 1165 1166 606 886 156 748 749 608 M061_0.6 958 1055 878 879 1059 953 952 872 954 957 1107 1352 774 1215 M104_0.6 1173 770 773 1183 1271 1272 1273 779 778 1178 M151_0.6 78 1285 M083_0.6 1041 1040 1043 1045 1044 1288 354 688 1360 684 800 1368	Assembly1 T1C:L5:5309 3735,4069~4071 T1C:L5:5310 3711,3736 T1C:L5:5311 2504,2507~2508 T1C:L5:5312 188,245~246 T1C:L5:5313 3644,3908~3909,4452,4532,4555
29	8yoo:S2 (2.0Å)	1719	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	N/A	RF01960 RF02542 RF01959 RF00177	Homo sapiens 9606	38942792	1303 1263 872 1149 1267 764 954 692 1079 1075 1072 1073 819 346 546 1378 930 936 935 M296_0.6 1314 M141_0.6 1068 s72 M147_0.6 1060 s102 1386 M016_0.6 s48 926 822 1128 1323 988 595 1327 707 986 796 836 762 790 838 1124 1017 1393 1392 1390 1236 1335 1334 M109_0.6 1238 M273_0.6 s14 445 s99 1311 105 902 900 821 788 1333 924 1244 s62 s96 M074_0.6 335 60 1167 977 976 974 970 509 1037 1035 1213 756 639 M148_0.6 786 1355 M065_0.6 93 167 M070_0.6 813 M050_0.6 1188 1022 1187 1029 815 727 722 883 604 606 884 749 779 608 996 M037_0.6 1055 878 1059 952 1195 43 870 1380 325 758 770 610 1274 1042 M127_0.6 s24 s61 804	Assembly1 T1C:S2:1930 1331,1489~1491

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Reference:

Chengxin Zhang, Lydia Freddolino (2024) "FURNA: a database for function annotations of RNA structures," PLOS Biology 22(7): e3002476.