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FURNA
Download all results in tab-seperated text for 15 RNAs.
  • Click the entry in the '#' column to view structure details of that RNA chain.
  • Hover over PDB to view the title of the structure.
  • Hover over Rfam to view names of Rfam families.
  • Hover over PubMed to view title of the PubMed publications.
  • Hover over Ligand to view the name of the ligand and the ligand-binding nucleotides on the RNA.

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    # PDB
    (Resolution)    		 Length EC number
    & GO term     		RNAcentral Rfam Taxon PubMed ATtRACT
    motif     		Ligand &
    binding nucleotides
    1 1hnw:A
    (3.4Å)
    		 1507 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E226 RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    274    		 11163189 Assembly1
    TAC:A:1632 965~966,1054,1197~1198
    TAC:A:1633 242,244,892~893,907
    2 1i97:A
    (4.5Å)
    		 1514 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E19C RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    274    		 11296217 Assembly1
    TAC:A:2001 1035~1036,1177~1179
    TAC:A:2003 1141,1143~1147,1152~1155,1163
    TAC:A:2004 918~920,1213~1214,1323~1324,13
    30~1332
    TAC:A:2005 239,241,871~873,882
    TAC:A:2006 911,1166~1167,1326~1327,1359
    3 4v9a:AA
    (3.2999Å)
    		 1506 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DEDF RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 23431179 Assembly1
    TAC:AA:1833 1054,1195~1198
    4 4v9a:CA
    (3.2999Å)
    		 1506 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DEDF RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 23431179 Assembly2
    TAC:CA:1805 1054,1195,1197~1198
    5 5j5b:AA
    (2.8Å)
    		 1534 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000081169C RF00177
    RF01959
    RF01960    		 Escherichia
    coli
    K-12
    83333    		 27382179 Assembly1
    TAC:AA:1678 1054,1195,1197~1198
    6 5j5b:BA
    (2.8Å)
    		 1533 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000081169C RF00177
    RF01959
    RF01960    		 Escherichia
    coli
    K-12
    83333    		 27382179 Assembly2
    TAC:BA:1602 1054,1197~1198
    7 5j7l:AA
    (3.0Å)
    		 1534 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000A7637F RF00177
    RF01959
    RF01960    		 Escherichia
    coli
    K-12
    83333    		 27382179 Assembly1
    TAC:AA:1680 1054,1195,1197~1198
    TAC:AA:1681 15~16,1396~1397
    8 5j7l:BA
    (3.0Å)
    		 1533 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000A7637F RF00177
    RF01959
    RF01960    		 Escherichia
    coli
    K-12
    83333    		 27382179 Assembly2
    TAC:BA:1643 1054,1197~1198
    TAC:BA:1644 15~16,1396~1397
    9 8cf1:A
    (1.82Å)
    		 485 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000268143B RF00177
    RF01959
    RF01960
    RF02542    		 Escherichia
    coli
    BW25113
    679895    		 37550453 Assembly1
    TAC:A:1601 1054,1195~1198
    10 8cgj:A
    (1.79Å)
    		 1130 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000268143B RF00177
    RF01959
    RF02542
    RF01960    		 Escherichia
    coli
    BW25113
    679895    		 37550453 Assembly1
    TAC:A:1604 244,893,906~908
    11 8syk:A
    (3.06Å)
    		 107 EC:3.1.-.-
    GO:0004540 (F) RNA nuclease activity    		 N/A RF00163 synthetic
    construct
    32630    		 N/A Assembly1
    TAC:A:202 60,66~67,97
    12 8syk:B
    (3.06Å)
    		 106 EC:3.1.-.-
    GO:0004540 (F) RNA nuclease activity    		 N/A RF00163 synthetic
    construct
    32630    		 N/A Assembly2
    TAC:B:202 60,66~67,97
    13 8syk:C
    (3.06Å)
    		 107 EC:3.1.-.-
    GO:0004540 (F) RNA nuclease activity    		 N/A RF00163 synthetic
    construct
    32630    		 N/A Assembly3
    TAC:C:202 60,63,66~67,97
    14 8syk:D
    (3.06Å)
    		 107 EC:3.1.-.-
    GO:0004540 (F) RNA nuclease activity    		 N/A RF00163 synthetic
    construct
    32630    		 N/A Assembly4
    TAC:D:202 60,62~63,66~67,97
    15 8t5o:A
    (2.98Å)
    		 111 EC:3.1.-.-
    GO:0004540 (F) RNA nuclease activity    		 N/A RF00163 synthetic
    construct
    32630    		 N/A Assembly1
    TAC:A:301 63,66~67,97~98
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    Reference:
  • Chengxin Zhang, P. Lydia Freddolino (2023) FURNA: a database for function annotations of RNA structures, bioRxiv 2023.12.19.572314.

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