SEQ2FUN

FURNA
Download all results in tab-seperated text for 18 RNAs.
  • Click the entry in the '#' column to view structure details of that RNA chain.
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  • Hover over Ligand to view the name of the ligand and the ligand-binding nucleotides on the RNA.

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    # PDB
    (Resolution)    		 Length EC number
    & GO term     		RNAcentral Rfam Taxon PubMed ATtRACT
    motif     		Ligand &
    binding nucleotides
    1 1p9x:0
    (3.4Å)
    		 2738 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DEF1 RF02541 Deinococcus
    radiodurans
    1299    		 12837804 Assembly1
    TEL:0:2881 803,2041,2484,2590
    2 1yij:0
    (2.6Å)
    		 2754 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E07C RF02540 Haloarcula
    marismortui
    2238    		 15851032 Assembly1
    TEL:0:9000 2099~2100,2103,2538,2540,2644,
    2646
    3 4v7s:BA
    (3.2547Å)
    		 2854 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E25C RF02541 Escherichia
    coli
    562    		 20876128 Assembly1
    TEL:BA:3135 748,752,2058~2059,2062,2503,25
    05,2609~2611
    4 4v7z:BA
    (3.1Å)
    		 2725 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E25D RF02541 Thermus
    thermophilus
    HB8
    300852    		 20876130 Assembly1
    TEL:BA:3362 745,752,2058,2503,2609,2611
    5 4v7z:DA
    (3.1Å)
    		 2725 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E25D RF02541 Thermus
    thermophilus
    HB8
    300852    		 20876130 Assembly2
    TEL:DA:3320 745,748,752,2058,2503,2609,261
    1
    6 4wf9:X
    (3.427Å)
    		 2712 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001450D9 RF02541 Staphylococcus
    aureus
    subsp.
    aureus
    NCTC
    8325
    93061    		 26464510 Assembly1
    TEL:X:3001 791,2085~2086,2532,2638
    7 6ha1:A
    (3.1Å)
    		 2887 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00005906D8 RF02541 Bacillus
    subtilis
    subsp.
    subtilis
    str.
    168
    224308    		 30126986 Assembly1
    TEL:A:3001 795,799,2087~2088,2532,2534,26
    38~2640
    8 6ha8:A
    (3.5Å)
    		 2887 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00005906D8 RF02541 Bacillus
    subtilis
    subsp.
    subtilis
    str.
    168
    224308    		 30126986 Assembly1
    TEL:A:3001 795,799,2087~2088,2091,2532,26
    38~2640
    9 6xhy:1A
    (2.6Å)
    		 2871 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001698E8 RF02541 Thermus
    thermophilus
    HB8
    300852    		 33462493 Assembly1
    TEL:1A:4076 745~746,752,2058~2059,2062,250
    3,2505,2609~2611
    10 6xhy:2A
    (2.6Å)
    		 2800 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001698E8 RF02541 Thermus
    thermophilus
    HB8
    300852    		 33462493 Assembly2
    TEL:2A:3845 745~746,752,2058~2059,2062,250
    3,2505,2609,2611
    11 7azy:E
    (2.877Å)
    		 3161 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00023119CC RF02543 Saccharomyces
    cerevisiae
    S288C
    559292    		 33990576 Assembly1
    TEL:E:3401 884,2400~2401,2872,2874,2978,2
    980
    12 7nsq:A
    (3.1Å)
    		 2903 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E25C RF02541 Escherichia
    coli
    562    		 34294725 Assembly1
    TEL:A:9000 748,752,2058~2059,2609,2611
    13 8fc3:1A
    (2.6Å)
    		 2872 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001698E8 RF02541 Thermus
    thermophilus
    HB8
    300852    		 37452045 Assembly1
    TEL:1A:4019 745~746,752,2058~2059,2062,250
    3,2505,2609,2611
    14 8fc3:2A
    (2.6Å)
    		 2867 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001698E8 RF02541 Thermus
    thermophilus
    HB8
    300852    		 37452045 Assembly2
    TEL:2A:3739 745~746,752,2058~2059,2062,250
    3,2609,2611
    15 8fc6:1A
    (2.35Å)
    		 2872 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001698E8 RF02541 Thermus
    thermophilus
    HB8
    300852    		 37452045 Assembly1
    TEL:1A:4021 745~746,752,2058~2059,2062,250
    3,2505,2609~2611
    16 8fc6:2A
    (2.35Å)
    		 2867 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001698E8 RF02541 Thermus
    thermophilus
    HB8
    300852    		 37452045 Assembly2
    TEL:2A:3744 746,752,2058~2059,2062,2503,25
    05,2609~2611
    17 9o3i:1A
    (2.8Å)
    		 2871 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02541 Thermus
    thermophilus
    HB8
    300852    		 40502108 Assembly1
    TEL:1A:4082 745~746,752,2058~2059,2062,250
    3,2505,2609,2611
    18 9o3i:2A
    (2.8Å)
    		 2800 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02541 Thermus
    thermophilus
    HB8
    300852    		 40502108 Assembly2
    TEL:2A:3826 745~746,752,2058~2059,2062,250
    3,2609,2611
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    Reference:
  • Chengxin Zhang, Lydia Freddolino (2024) "FURNA: a database for function annotations of RNA structures," PLOS Biology 22(7): e3002476.