SEQ2FUN

FURNA
Download all results in tab-seperated text for 13 RNAs.
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    # PDB
    (Resolution)
    Length EC number
    & GO term
    RNAcentral Rfam Taxon PubMed ATtRACT
    motif
    Ligand &
    binding nucleotides
    1 2cky:A
    (2.9Å)

    77 GO:0030976 (F) thiamine pyrophosphate ... URS000080DE9F RF00059 Arabidopsis
    thaliana

    3702
    16675665 Assembly1
    TPP:A:1084 11,28,30~31,45,60~61
    2 2cky:B
    (2.9Å)

    77 GO:0030976 (F) thiamine pyrophosphate ... URS000080DE9F RF00059 Arabidopsis
    thaliana

    3702
    16675665 Assembly2
    TPP:B:1082 11,28,30~31,45,60,63~64
    3 2gdi:X
    (2.05Å)

    80 GO:0030976 (F) thiamine pyrophosphate ... URS000080DDEB RF00059 Escherichia
    coli

    562
    16728979 Assembly1
    TPP:X:100 19,40,42~43,58,72,77~78
    4 2gdi:Y
    (2.05Å)

    80 GO:0030976 (F) thiamine pyrophosphate ... URS000080DDEB RF00059 Escherichia
    coli

    562
    16728979 Assembly2
    TPP:Y:100 19,40,42~43,58,72~73,77~78
    5 2hoj:A
    (2.5Å)

    79 GO:0030976 (F) thiamine pyrophosphate ... URS000080E068 RF00059 Escherichia
    coli

    562
    16962976 Assembly1
    TPP:A:114 19,40,42~43,57~58,72,78
    6 2hok:A
    (3.2Å)

    78 GO:0030976 (F) thiamine pyrophosphate ... URS000080E068 RF00059 Escherichia
    coli

    562
    16962976 Assembly1
    TPP:A:93 19,40,42~43,57~58,72,77~78
    7 2hol:A
    (2.9Å)

    79 GO:0030976 (F) thiamine pyrophosphate ... URS000080E068 RF00059 Escherichia
    coli

    562
    16962976 Assembly1
    TPP:A:105 19,40,42~43,58,72,77~78
    8 3d2g:A
    (2.25Å)

    77 GO:0030976 (F) thiamine pyrophosphate ... URS000080DE9F RF00059 Arabidopsis
    thaliana

    3702
    18533652 Assembly1
    TPP:A:83 11,28,30~31,45,60~61,65~66
    9 3d2g:B
    (2.25Å)

    77 GO:0030976 (F) thiamine pyrophosphate ... URS000080DE9F RF00059 Arabidopsis
    thaliana

    3702
    18533652 Assembly2
    TPP:B:83 11~12,28,30~31,45,60,65~66
    10 3k0j:E
    (3.1Å)

    87 GO:0030976 (F) thiamine pyrophosphate ... URS000080E23F RF00059 Escherichia
    coli

    562
    19948769 Assembly1
    TPP:E:601 14~15,42~43,72,76~78
    11 3k0j:F
    (3.1Å)

    87 GO:0030976 (F) thiamine pyrophosphate ... URS000080E23F RF00059 Escherichia
    coli

    562
    19948769 Assembly2
    TPP:F:602 114,142~143,158,172,176~177
    12 7tda:A
    (2.25Å)

    80 GO:0030976 (F) thiamine pyrophosphate ... URS000080E068 RF00059 Escherichia
    coli

    562
    35060698 Assembly1
    TPP:A:201 19~20,40,42~43,58,72,77~78
    13 9c6k:X
    (2.94Å)

    80 GO:0030976 (F) thiamine pyrophosphate ... N/A RF00059 Escherichia
    coli

    562
    39837824 Assembly1
    TPP:X:203 19,40,42~43,58,72,77~78
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    Reference:
  • Chengxin Zhang, Lydia Freddolino (2024) "FURNA: a database for function annotations of RNA structures," PLOS Biology 22(7): e3002476.