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FURNA
Download all results in tab-seperated text for 9 RNAs.
  • Click the entry in the '#' column to view structure details of that RNA chain.
  • Hover over PDB to view the title of the structure.
  • Hover over Rfam to view names of Rfam families.
  • Hover over PubMed to view title of the PubMed publications.
  • Hover over Ligand to view the name of the ligand and the ligand-binding nucleotides on the RNA.

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    # PDB
    (Resolution)    		 Length EC number
    & GO term     		RNAcentral Rfam Taxon PubMed ATtRACT
    motif     		Ligand &
    binding nucleotides
    1 1a34:B
    (1.81Å)
    		 10 N/A URS000080DEB3 N/A synthetic
    construct
    32630    		 9514737 Assembly1
    U:B:11 8~9
    2 1a34:C
    (1.81Å)
    		 10 N/A URS00002C5188 N/A synthetic
    construct
    32630    		 9514737 Assembly1
    U:B-6:11 8~9
    3 7pd3:A
    (3.4Å)
    		 1280 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0002311A1E RF02541
    RF02540    		 Homo
    sapiens
    9606    		 34609277
    591

    1165

    M269_0.6

    156

    M013_0.6

    1228

    M089_0.6

    1199

    693

    1191

    1075

    M111_0.6

    1271

    1395

    M272_0.6

    1328

    M081_0.6

    1310

    1353

    1334

    M148_0.6

    1239

    M350_0.6

    s14

    74

    161

    s25

    1289

    s44

    1100

    1246

    1385

    687

    800

    s60

    s61    		 Assembly1
    U:A:3315 3000~3001
    U:A:3322 2714,2997
    U:A:3345 1962,2502
    U:A:3347 1956,2720~2721
    U:A:3349 2312,2676~2677
    U:A:3353 2685~2686,2715~2716
    U:A:3355 2711~2712
    4 8evr:B5
    (2.87Å)
    		 1173 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0002681484 RF01960
    RF02542
    RF01959
    RF00177    		 Saccharomyces
    cerevisiae
    4932    		 37595043
    101

    441

    M080_0.6

    386

    M107_0.6

    497

    490    		 Assembly1
    U:BC:306 13,1086~1087
    U:BO:201 992,1006
    U:B5:1850 1167~1168
    U:B5:1851 1166~1167
    U:B5:1854 1158,1163
    U:B5:1860 1157,1160
    U:B5:1865 1152~1153
    U:B5:1866 1151~1152
    U:B5:1867 1149,1151
    U:B5:1917 1005~1006
    5 8evs:A1
    (2.62Å)
    		 3198 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0002681472 RF02543 Saccharomyces
    cerevisiae
    4932    		 37595043
    M107_0.6

    M080_0.6

    M299_0.6

    16    		 Assembly1
    U:A1:3407 2124~2125
    U:A1:3423 2255,2262
    6 8evs:B5
    (2.62Å)
    		 1173 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0002681484 RF01960
    RF02542
    RF01959
    RF00177    		 Saccharomyces
    cerevisiae
    4932    		 37595043
    101

    441

    M080_0.6

    386

    M107_0.6

    497

    490    		 Assembly1
    U:BO:201 992,1006
    U:BT:214 1171~1172
    U:B5:1821 13,1086~1087
    U:B5:1831 1188~1189
    U:B5:1852 1167~1168
    U:B5:1853 1166~1167
    U:B5:1856 1158,1163
    U:B5:1858 1164~1165
    U:B5:1867 1152~1153
    U:B5:1868 1151~1152
    U:B5:1869 1149,1151
    U:B5:1920 1005~1006
    U:An:111 978~979
    U:EC:7006 1001~1002
    7 8evs:EC
    (2.62Å)
    		 195 N/A URS000268147B N/A Saccharomyces
    cerevisiae
    4932    		 37595043 Assembly1
    U:EC:7006 6950~6951
    8 8evt:A1
    (2.2Å)
    		 3192 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0002681478 RF02543 Saccharomyces
    cerevisiae
    4932    		 37595043
    M107_0.6

    M080_0.6

    M299_0.6

    16    		 Assembly1
    U:A1:3405 2257~2258
    U:A1:3408 2124~2125
    9 8evt:B5
    (2.2Å)
    		 1173 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0002681484 RF01960
    RF02542
    RF01959
    RF00177    		 Saccharomyces
    cerevisiae
    4932    		 37595043
    101

    441

    M080_0.6

    386

    M107_0.6

    497

    490    		 Assembly1
    U:BC:305 1144~1145
    U:BT:212 1171~1172
    U:B5:1823 13,1086~1087
    U:B5:1856 1166~1167
    U:B5:1859 1158,1163
    U:B5:1865 1157,1160
    U:B5:1870 1152~1153
    U:B5:1871 1151~1152
    U:B5:1872 1149,1151
    U:B5:1925 1005~1006
    U:B5:1933 992,1006
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    Reference:
  • Chengxin Zhang, P. Lydia Freddolino (2023) FURNA: a database for function annotations of RNA structures, bioRxiv 2023.12.19.572314.

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