SEQ2FUN

FURNA
Download all results in tab-seperated text for 8 RNAs.
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  • Hover over Ligand to view the name of the ligand and the ligand-binding nucleotides on the RNA.

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    # PDB
    (Resolution)    		 Length EC number
    & GO term     		RNAcentral Rfam Taxon PubMed ATtRACT
    motif     		Ligand &
    binding nucleotides
    1 6xqd:1a
    (2.8Å)
    		 1500 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DFED RF00177 Thermus
    thermophilus
    HB8
    300852    		 32817463 Assembly1
    V7A:1a:1835 965~966,1054,1195~1198
    2 6xqd:2a
    (2.8Å)
    		 1503 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DFED RF00177 Thermus
    thermophilus
    HB8
    300852    		 32817463 Assembly2
    V7A:2a:3210 965,1054,1197~1198
    3 6xqe:1a
    (3.0Å)
    		 1500 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DFED RF00177 Thermus
    thermophilus
    HB8
    300852    		 32817463 Assembly1
    V7A:1a:3213 965~966,1054,1195,1197~1198
    4 6xqe:2a
    (3.0Å)
    		 1503 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DFED RF00177 Thermus
    thermophilus
    HB8
    300852    		 32817463 Assembly2
    V7A:2a:1817 965~966,1054,1196~1197
    5 8crx:A
    (2.78Å)
    		 1505 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000A1FB0E RF00177 Cutibacterium
    acnes
    1747    		 36864821 Assembly1
    V7A:A:1601 949~950,1039,1183~1184
    6 8crx:a
    (2.78Å)
    		 2903 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000268139D RF02541 Cutibacterium
    acnes
    1747    		 36864821 Assembly1
    V7A:a:3101 1965,2245,2623~2624,2767~2768,
    2791
    7 8cvm:a
    (2.66Å)
    		 2903 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000268139D RF02541 Cutibacterium
    acnes
    1747    		 36864821 Assembly1
    V7A:a:3101 1965,2245,2623~2624,2767~2768,
    2791
    8 8cvo:A
    (2.95Å)
    		 471 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000A1FB0E RF00177 Cutibacterium
    acnes
    1747    		 36864821 Assembly1
    V7A:A:1601 949~950,1039,1183~1184
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    Reference:
  • Chengxin Zhang, Lydia Freddolino (2024) "FURNA: a database for function annotations of RNA structures," PLOS Biology 22(7): e3002476.