SEQ2FUN

FURNA
Download all results in tab-seperated text for 10 RNAs.
  • Click the entry in the '#' column to view structure details of that RNA chain.
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  • Hover over Ligand to view the name of the ligand and the ligand-binding nucleotides on the RNA.
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    # PDB
    (Resolution)
    Length EC number
    & GO term
    RNAcentral Rfam Taxon PubMed ATtRACT
    motif
    Ligand &
    binding nucleotides
    1 1m1k:A
    (3.2Å)

    2754 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS000080DFCD RF02540
    RF00002
    Haloarcula
    marismortui

    2238
    12150912 Assembly1
    ZIT:A:8600 839,2099~2100,2540,2645~2646
    2 1nwy:0
    (3.3Å)

    2766 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS000080DEF1 RF02540
    RF02541
    Deinococcus
    radiodurans

    1299
    12623020 Assembly1
    ZIT:0:2881 2041~2042,2482,2484,2565,2588~
    2589

    ZIT:0:2882 764,803
    3 1yhq:0
    (2.4Å)

    2754 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS000080E07C RF02540
    RF00002
    Haloarcula
    marismortui

    2238
    15851032 Assembly1
    ZIT:0:9500 2099~2100,2103,2538,2540,2645~
    2646
    4 4v7y:BA
    (3.0Å)

    2725 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS000080E25D RF02540
    RF02541
    RF00002
    Thermus
    thermophilus
    HB8

    300852
    20876130 Assembly1
    ZIT:BA:3351 746,2058~2059,2503,2505,2610~2
    611
    5 4v7y:DA
    (3.0Å)

    2725 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS000080E25D RF02540
    RF02541
    RF00002
    Thermus
    thermophilus
    HB8

    300852
    20876130 Assembly2
    ZIT:DA:3311 746,2058~2059,2503,2505,2610~2
    611
    6 8e42:I
    (2.29Å)

    2898 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00004B0F34 RF02541 Escherichia
    coli

    562
    N/A Assembly1
    ZIT:I:3002 746~747,2058~2059,2062,2503,25
    05,2611
    7 8fc2:1A
    (2.5Å)

    2872 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00001698E8 RF02541 Thermus
    thermophilus
    HB8

    300852
    37452045 Assembly1
    ZIT:1A:4023 2058~2059,2062,2503,2505,2610~
    2611
    8 8fc2:2A
    (2.5Å)

    2867 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00001698E8 RF02541 Thermus
    thermophilus
    HB8

    300852
    37452045 Assembly2
    ZIT:2A:3731 746,2058~2059,2062,2503,2505,2
    611
    9 8fc5:1A
    (2.65Å)

    2872 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00001698E8 RF02541 Thermus
    thermophilus
    HB8

    300852
    37452045 Assembly1
    ZIT:1A:4033 2058~2059,2062,2503,2505,2611
    10 8fc5:2A
    (2.65Å)

    2867 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00001698E8 RF02541 Thermus
    thermophilus
    HB8

    300852
    37452045 Assembly2
    ZIT:2A:3713 746,2058~2059,2062,2503,2505,2
    611
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    Reference:
  • Chengxin Zhang, Lydia Freddolino (2024) "FURNA: a database for function annotations of RNA structures," PLOS Biology 22(7): e3002476.