SEQ2FUN

FURNA
Download all results in tab-seperated text for 6 RNAs.
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  • Hover over Ligand to view the name of the ligand and the ligand-binding nucleotides on the RNA.

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    # PDB
    (Resolution)    		 Length EC number
    & GO term     		RNAcentral Rfam Taxon PubMed ATtRACT
    motif     		Ligand &
    binding nucleotides
    1 3cpw:0
    (2.7Å)
    		 2754 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E267 RF02540 Haloarcula
    marismortui
    2238    		 18494460 Assembly1
    ZLD:0:9500 2102,2486~2487,2538~2541
    2 3dll:X
    (3.5Å)
    		 2686 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DEF1 RF02541 Deinococcus
    radiodurans
    1299    		 18757750 Assembly1
    ZLD:X:2911 2044,2431,2482,2484,2564
    3 4wfa:X
    (3.392Å)
    		 2711 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001450D9 RF02541 Staphylococcus
    aureus
    subsp.
    aureus
    NCTC
    8325
    93061    		 26464510 Assembly1
    ZLD:X:3001 2088,2474,2478~2479,2528,2531~
    2533,2612
    4 7s1g:I
    (2.48Å)
    		 2898 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B0F34 RF02541 Escherichia
    coli
    562    		 35165456
    31588918
    29872003
    20383002
    32881101    		 Assembly1
    ZLD:I:3111 2061,2451~2452,2503~2506,2585
    5 7s1h:I
    (2.35Å)
    		 2898 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B0F34 RF02541 Escherichia
    coli
    562    		 35165456
    31588918
    29872003
    20383002
    32881101    		 Assembly1
    ZLD:I:3114 2061,2451~2452,2504~2506,2585
    6 9cn3:A
    (2.62Å)
    		 1527 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E357 RF02541 Homo
    sapiens
    9606    		 39907106
    591

    590

    M269_0.6

    1165

    1328

    1228

    M019_0.6

    175

    1199

    693

    M106_0.6

    156

    1191

    1075

    M161_0.6

    43

    M111_0.6

    1271

    1395

    M272_0.6

    M013_0.6

    M081_0.6

    994

    996

    M087_0.6

    1310

    1353

    1334

    M148_0.6

    1239

    M350_0.6

    s93

    74

    161

    M043_0.6

    800

    s25

    33

    M088_0.6

    1289

    s44

    1364

    s41

    1100

    1246

    1385

    687

    M016_0.6

    s60    		 Assembly1
    ZLD:A:3400 2724,2938~2939,2991~2993,3072
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    Reference:
  • Chengxin Zhang, Lydia Freddolino (2024) "FURNA: a database for function annotations of RNA structures," PLOS Biology 22(7): e3002476.