SEQ2FUN

FURNA
Download all results in tab-seperated text for 17863 RNAs.
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  • Hover over Ligand to view the name of the ligand and the ligand-binding nucleotides on the RNA.

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    # PDB
    (Resolution)    		 Length EC number
    & GO term     		RNAcentral Rfam Taxon PubMed ATtRACT
    motif     		Ligand &
    binding nucleotides
    3401 4v99:CD
    (2.9Å)
    		 17 N/A URS000080E112 N/A Panicum
    mosaic
    virus
    strain
    Kansas
    109S
    652599    		 23123270
    15681868    		 Assembly1
    protein:CA:54~238 7,9~13
    protein:DG:50~238 5~7,13
    3402 4v99:CI
    (2.9Å)
    		 17 N/A URS000080E112 N/A Panicum
    mosaic
    virus
    strain
    Kansas
    109S
    652599    		 23123270
    15681868    		 Assembly1
    protein:CF:54~238 7,9~13
    protein:Cz:50~238 5~7,13
    3403 4v99:CN
    (2.9Å)
    		 17 N/A URS000080E112 N/A Panicum
    mosaic
    virus
    strain
    Kansas
    109S
    652599    		 23123270
    15681868    		 Assembly1
    protein:CB:50~238 5~7,13
    protein:CK:54~238 7,9~13
    3404 4v99:CS
    (2.9Å)
    		 17 N/A URS000080E112 N/A Panicum
    mosaic
    virus
    strain
    Kansas
    109S
    652599    		 23123270
    15681868    		 Assembly1
    protein:CP:54~238 7,9~13
    protein:EG:50~238 5~7,13
    3405 4v99:CX
    (2.9Å)
    		 17 N/A URS000080E112 N/A Panicum
    mosaic
    virus
    strain
    Kansas
    109S
    652599    		 23123270
    15681868    		 Assembly1
    protein:BB:50~238 5~7,13
    protein:CU:54~238 7,9~13
    3406 4v99:Cc
    (2.9Å)
    		 17 N/A URS000080E112 N/A Panicum
    mosaic
    virus
    strain
    Kansas
    109S
    652599    		 23123270
    15681868    		 Assembly1
    protein:CZ:54~238 7,9~13
    protein:DQ:50~238 5~7,13
    3407 4v99:Ch
    (2.9Å)
    		 17 N/A URS000080E112 N/A Panicum
    mosaic
    virus
    strain
    Kansas
    109S
    652599    		 23123270
    15681868    		 Assembly1
    protein:Af:50~238 5~7,13
    protein:Ce:54~238 7,9~13
    3408 4v99:Cm
    (2.9Å)
    		 17 N/A URS000080E112 N/A Panicum
    mosaic
    virus
    strain
    Kansas
    109S
    652599    		 23123270
    15681868    		 Assembly1
    protein:Cj:54~238 7,9~13
    protein:EQ:50~238 5~7,13
    3409 4v99:Cr
    (2.9Å)
    		 17 N/A URS000080E112 N/A Panicum
    mosaic
    virus
    strain
    Kansas
    109S
    652599    		 23123270
    15681868    		 Assembly1
    protein:Co:54~238 7,9~13
    protein:Du:50~238 5~7,13
    3410 4v99:Cw
    (2.9Å)
    		 17 N/A URS000080E112 N/A Panicum
    mosaic
    virus
    strain
    Kansas
    109S
    652599    		 23123270
    15681868    		 Assembly1
    protein:CQ:50~238 5~7,13
    protein:Ct:54~238 7,9~13
    3411 4v99:D2
    (2.9Å)
    		 17 N/A URS000080E112 N/A Panicum
    mosaic
    virus
    strain
    Kansas
    109S
    652599    		 23123270
    15681868    		 Assembly1
    protein:CG:50~238 5~7,13
    protein:Dy:54~238 7,9~13
    3412 4v99:D7
    (2.9Å)
    		 17 N/A URS000080E112 N/A Panicum
    mosaic
    virus
    strain
    Kansas
    109S
    652599    		 23123270
    15681868    		 Assembly1
    protein:D4:54~238 7,9~13
    protein:EB:50~238 5~7,13
    3413 4v99:DD
    (2.9Å)
    		 17 N/A URS000080E112 N/A Panicum
    mosaic
    virus
    strain
    Kansas
    109S
    652599    		 23123270
    15681868    		 Assembly1
    protein:Bp:50~238 5~7,13
    protein:DA:54~238 7,9~13
    3414 4v99:DI
    (2.9Å)
    		 17 N/A URS000080E112 N/A Panicum
    mosaic
    virus
    strain
    Kansas
    109S
    652599    		 23123270
    15681868    		 Assembly1
    protein:AL:50~238 5~7,13
    protein:DF:54~238 7,9~13
    3415 4v99:DN
    (2.9Å)
    		 17 N/A URS000080E112 N/A Panicum
    mosaic
    virus
    strain
    Kansas
    109S
    652599    		 23123270
    15681868    		 Assembly1
    protein:Bz:50~238 5~7,13
    protein:DK:54~238 7,9~13
    3416 4v99:DS
    (2.9Å)
    		 17 N/A URS000080E112 N/A Panicum
    mosaic
    virus
    strain
    Kansas
    109S
    652599    		 23123270
    15681868    		 Assembly1
    protein:DP:54~238 7,9~13
    protein:Ep:50~238 5~7,13
    3417 4v99:DX
    (2.9Å)
    		 17 N/A URS000080E112 N/A Panicum
    mosaic
    virus
    strain
    Kansas
    109S
    652599    		 23123270
    15681868    		 Assembly1
    protein:DU:54~238 7,9~13
    protein:Dp:50~238 5~7,13
    3418 4v99:Dc
    (2.9Å)
    		 17 N/A URS000080E112 N/A Panicum
    mosaic
    virus
    strain
    Kansas
    109S
    652599    		 23123270
    15681868    		 Assembly1
    protein:CL:50~238 5~7,13
    protein:DZ:54~238 7,9~13
    3419 4v99:Dh
    (2.9Å)
    		 17 N/A URS000080E112 N/A Panicum
    mosaic
    virus
    strain
    Kansas
    109S
    652599    		 23123270
    15681868    		 Assembly1
    protein:Az:50~238 5~7,13
    protein:De:54~238 7,9~13
    3420 4v99:Dm
    (2.9Å)
    		 17 N/A URS000080E112 N/A Panicum
    mosaic
    virus
    strain
    Kansas
    109S
    652599    		 23123270
    15681868    		 Assembly1
    protein:Cf:50~238 5~7,13
    protein:Dj:54~238 7,9~13
    3421 4v99:Dr
    (2.9Å)
    		 17 N/A URS000080E112 N/A Panicum
    mosaic
    virus
    strain
    Kansas
    109S
    652599    		 23123270
    15681868    		 Assembly1
    protein:CV:50~238 5~7,13
    protein:Do:54~238 7,9~13
    3422 4v99:Dw
    (2.9Å)
    		 17 N/A URS000080E112 N/A Panicum
    mosaic
    virus
    strain
    Kansas
    109S
    652599    		 23123270
    15681868    		 Assembly1
    protein:Ap:50~238 5~7,13
    protein:Dt:54~238 7,9~13
    3423 4v99:E2
    (2.9Å)
    		 17 N/A URS000080E112 N/A Panicum
    mosaic
    virus
    strain
    Kansas
    109S
    652599    		 23123270
    15681868    		 Assembly1
    protein:Cu:50~238 5~7,13
    protein:Ey:54~238 7,9~13
    3424 4v99:E7
    (2.9Å)
    		 17 N/A URS000080E112 N/A Panicum
    mosaic
    virus
    strain
    Kansas
    109S
    652599    		 23123270
    15681868    		 Assembly1
    protein:Dk:50~238 5~7,13
    protein:E4:54~238 7,9~13
    3425 4v99:ED
    (2.9Å)
    		 17 N/A URS000080E112 N/A Panicum
    mosaic
    virus
    strain
    Kansas
    109S
    652599    		 23123270
    15681868    		 Assembly1
    protein:Bf:50~238 5~7,13
    protein:EA:54~238 7,9~13
    3426 4v99:EI
    (2.9Å)
    		 17 N/A URS000080E112 N/A Panicum
    mosaic
    virus
    strain
    Kansas
    109S
    652599    		 23123270
    15681868    		 Assembly1
    protein:Ak:50~238 5~7,13
    protein:EF:54~238 7,9~13
    3427 4v99:EN
    (2.9Å)
    		 17 N/A URS000080E112 N/A Panicum
    mosaic
    virus
    strain
    Kansas
    109S
    652599    		 23123270
    15681868    		 Assembly1
    protein:C5:50~238 5~7,13
    protein:EK:54~238 7,9~13
    3428 4v99:ES
    (2.9Å)
    		 17 N/A URS000080E112 N/A Panicum
    mosaic
    virus
    strain
    Kansas
    109S
    652599    		 23123270
    15681868    		 Assembly1
    protein:DB:50~238 5~7,13
    protein:EP:54~238 7,9~13
    3429 4v99:EX
    (2.9Å)
    		 17 N/A URS000080E112 N/A Panicum
    mosaic
    virus
    strain
    Kansas
    109S
    652599    		 23123270
    15681868    		 Assembly1
    protein:EU:54~238 7,9~13
    protein:Ea:50~238 5~7,13
    3430 4v99:Ec
    (2.9Å)
    		 17 N/A URS000080E112 N/A Panicum
    mosaic
    virus
    strain
    Kansas
    109S
    652599    		 23123270
    15681868    		 Assembly1
    protein:EZ:54~238 7,9~13
    protein:Ef:50~238 5~7,13
    3431 4v99:Eh
    (2.9Å)
    		 17 N/A URS000080E112 N/A Panicum
    mosaic
    virus
    strain
    Kansas
    109S
    652599    		 23123270
    15681868    		 Assembly1
    protein:Ee:54~238 7,9~13
    protein:Ek:50~238 5~7,13
    3432 4v99:Em
    (2.9Å)
    		 17 N/A URS000080E112 N/A Panicum
    mosaic
    virus
    strain
    Kansas
    109S
    652599    		 23123270
    15681868    		 Assembly1
    protein:AB:50~238 5~7,13
    protein:Ej:54~238 7,9~13
    3433 4v99:Er
    (2.9Å)
    		 17 N/A URS000080E112 N/A Panicum
    mosaic
    virus
    strain
    Kansas
    109S
    652599    		 23123270
    15681868    		 Assembly1
    protein:BV:50~238 5~7,13
    protein:Eo:54~238 7,9~13
    3434 4v99:Ew
    (2.9Å)
    		 17 N/A URS000080E112 N/A Panicum
    mosaic
    virus
    strain
    Kansas
    109S
    652599    		 23123270
    15681868    		 Assembly1
    protein:Aa:50~238 5~7,13
    protein:Et:54~238 7,9~13
    3435 4v99:F2
    (2.9Å)
    		 17 N/A URS000080E112 N/A Panicum
    mosaic
    virus
    strain
    Kansas
    109S
    652599    		 23123270
    15681868    		 Assembly2
    protein:Fy:54~238 7~13
    protein:JL:50~238 5~7,13
    3436 4v99:F7
    (2.9Å)
    		 17 N/A URS000080E112 N/A Panicum
    mosaic
    virus
    strain
    Kansas
    109S
    652599    		 23123270
    15681868    		 Assembly2
    protein:F4:54~238 7,9~13
    protein:GQ:50~238 5~7,13
    3437 4v99:FD
    (2.9Å)
    		 17 N/A URS000080E112 N/A Panicum
    mosaic
    virus
    strain
    Kansas
    109S
    652599    		 23123270
    15681868    		 Assembly2
    protein:FA:54~238 7,9~13
    protein:JV:50~238 5~7,13
    3438 4v99:FI
    (2.9Å)
    		 17 N/A URS000080E112 N/A Panicum
    mosaic
    virus
    strain
    Kansas
    109S
    652599    		 23123270
    15681868    		 Assembly2
    protein:FF:54~238 7,9~13
    protein:F5:50~238 5~7,13
    3439 4v99:FN
    (2.9Å)
    		 17 N/A URS000080E112 N/A Panicum
    mosaic
    virus
    strain
    Kansas
    109S
    652599    		 23123270
    15681868    		 Assembly2
    protein:FK:54~238 7,9~13
    protein:Ia:50~238 5~7,13
    3440 4v99:FS
    (2.9Å)
    		 17 N/A URS000080E112 N/A Panicum
    mosaic
    virus
    strain
    Kansas
    109S
    652599    		 23123270
    15681868    		 Assembly2
    protein:FP:54~238 7,9~13
    protein:Ga:50~238 5~7,13
    3441 4v99:FX
    (2.9Å)
    		 17 N/A URS000080E112 N/A Panicum
    mosaic
    virus
    strain
    Kansas
    109S
    652599    		 23123270
    15681868    		 Assembly2
    protein:FU:54~238 7,9~13
    protein:Ha:50~238 5~7,13
    3442 4v99:Fc
    (2.9Å)
    		 17 N/A URS000080E112 N/A Panicum
    mosaic
    virus
    strain
    Kansas
    109S
    652599    		 23123270
    15681868    		 Assembly2
    protein:FZ:54~238 7,9~13
    protein:Iz:50~238 5~7,13
    3443 4v99:Fh
    (2.9Å)
    		 17 N/A URS000080E112 N/A Panicum
    mosaic
    virus
    strain
    Kansas
    109S
    652599    		 23123270
    15681868    		 Assembly2
    protein:Fe:54~238 9~13
    protein:Gk:50~238 5~6,13
    3444 4v99:Fm
    (2.9Å)
    		 17 N/A URS000080E112 N/A Panicum
    mosaic
    virus
    strain
    Kansas
    109S
    652599    		 23123270
    15681868    		 Assembly2
    protein:Fj:54~238 7,9~13
    protein:Jz:50~238 5~7,13
    3445 4v99:Fr
    (2.9Å)
    		 17 N/A URS000080E112 N/A Panicum
    mosaic
    virus
    strain
    Kansas
    109S
    652599    		 23123270
    15681868    		 Assembly2
    protein:Fo:54~238 7,9~13
    protein:IL:50~238 5~7,13
    3446 4v99:Fw
    (2.9Å)
    		 17 N/A URS000080E112 N/A Panicum
    mosaic
    virus
    strain
    Kansas
    109S
    652599    		 23123270
    15681868    		 Assembly2
    protein:FG:50~238 5~7,13
    protein:Ft:54~238 7,9~13
    3447 4v99:G2
    (2.9Å)
    		 17 N/A URS000080E112 N/A Panicum
    mosaic
    virus
    strain
    Kansas
    109S
    652599    		 23123270
    15681868    		 Assembly2
    protein:Gy:54~238 7,9~13
    3448 4v99:G7
    (2.9Å)
    		 17 N/A URS000080E112 N/A Panicum
    mosaic
    virus
    strain
    Kansas
    109S
    652599    		 23123270
    15681868    		 Assembly2
    protein:G4:54~238 7,9~13
    protein:If:50~238 5~7,13
    3449 4v99:GD
    (2.9Å)
    		 17 N/A URS000080E112 N/A Panicum
    mosaic
    virus
    strain
    Kansas
    109S
    652599    		 23123270
    15681868    		 Assembly2
    protein:GA:54~238 7,9~13
    protein:Gu:50~238 5~7,13
    3450 4v99:GI
    (2.9Å)
    		 17 N/A URS000080E112 N/A Panicum
    mosaic
    virus
    strain
    Kansas
    109S
    652599    		 23123270
    15681868    		 Assembly2
    protein:Fu:50~238 5~7,13
    protein:GF:54~238 7~13
    3451 4v99:GN
    (2.9Å)
    		 17 N/A URS000080E112 N/A Panicum
    mosaic
    virus
    strain
    Kansas
    109S
    652599    		 23123270
    15681868    		 Assembly2
    protein:GK:54~238 7,9~13
    protein:Hk:50~238 5~6,13
    3452 4v99:GS
    (2.9Å)
    		 17 N/A URS000080E112 N/A Panicum
    mosaic
    virus
    strain
    Kansas
    109S
    652599    		 23123270
    15681868    		 Assembly2
    protein:GG:50~238 5~7,13
    protein:GP:54~238 7,9~13
    3453 4v99:GX
    (2.9Å)
    		 17 N/A URS000080E112 N/A Panicum
    mosaic
    virus
    strain
    Kansas
    109S
    652599    		 23123270
    15681868    		 Assembly2
    protein:FV:50~238 5~7,13
    protein:GU:54~238 9~13
    3454 4v99:Gc
    (2.9Å)
    		 17 N/A URS000080E112 N/A Panicum
    mosaic
    virus
    strain
    Kansas
    109S
    652599    		 23123270
    15681868    		 Assembly2
    protein:GZ:54~238 7,9~13
    protein:I5:50~238 5~7,13
    3455 4v99:Gh
    (2.9Å)
    		 17 N/A URS000080E112 N/A Panicum
    mosaic
    virus
    strain
    Kansas
    109S
    652599    		 23123270
    15681868    		 Assembly2
    protein:FQ:50~238 5~7,13
    protein:Ge:54~238 7,9~13
    3456 4v99:Gm
    (2.9Å)
    		 17 N/A URS000080E112 N/A Panicum
    mosaic
    virus
    strain
    Kansas
    109S
    652599    		 23123270
    15681868    		 Assembly2
    protein:Gj:54~238 7,9~13
    protein:J5:50~238 5~7,13
    3457 4v99:Gr
    (2.9Å)
    		 17 N/A URS000080E112 N/A Panicum
    mosaic
    virus
    strain
    Kansas
    109S
    652599    		 23123270
    15681868    		 Assembly2
    protein:GL:50~238 5~7,13
    protein:Go:54~238 7,9~13
    3458 4v99:Gw
    (2.9Å)
    		 17 N/A URS000080E112 N/A Panicum
    mosaic
    virus
    strain
    Kansas
    109S
    652599    		 23123270
    15681868    		 Assembly2
    protein:Gt:54~238 7,9~13
    protein:IV:50~238 5~7
    3459 4v99:H2
    (2.9Å)
    		 17 N/A URS000080E112 N/A Panicum
    mosaic
    virus
    strain
    Kansas
    109S
    652599    		 23123270
    15681868    		 Assembly2
    protein:Hy:54~238 7,9~13
    protein:Ju:50~238 5~7,13
    3460 4v99:H7
    (2.9Å)
    		 17 N/A URS000080E112 N/A Panicum
    mosaic
    virus
    strain
    Kansas
    109S
    652599    		 23123270
    15681868    		 Assembly2
    protein:G5:50~238 5~7,13
    protein:H4:54~238 7,9~13
    3461 4v99:HD
    (2.9Å)
    		 17 N/A URS000080E112 N/A Panicum
    mosaic
    virus
    strain
    Kansas
    109S
    652599    		 23123270
    15681868    		 Assembly2
    protein:HA:54~238 7,9~13
    protein:IG:50~238 5~7,13
    3462 4v99:HI
    (2.9Å)
    		 17 N/A URS000080E112 N/A Panicum
    mosaic
    virus
    strain
    Kansas
    109S
    652599    		 23123270
    15681868    		 Assembly2
    protein:HF:54~238 7,9~13
    protein:Hz:50~238 5~7,13
    3463 4v99:HN
    (2.9Å)
    		 17 N/A URS000080E112 N/A Panicum
    mosaic
    virus
    strain
    Kansas
    109S
    652599    		 23123270
    15681868    		 Assembly2
    protein:HB:50~238 5~7,13
    protein:HK:54~238 7~13
    3464 4v99:HS
    (2.9Å)
    		 17 N/A URS000080E112 N/A Panicum
    mosaic
    virus
    strain
    Kansas
    109S
    652599    		 23123270
    15681868    		 Assembly2
    protein:HP:54~238 7,9~13
    protein:JG:50~238 5~7,13
    3465 4v99:HX
    (2.9Å)
    		 17 N/A URS000080E112 N/A Panicum
    mosaic
    virus
    strain
    Kansas
    109S
    652599    		 23123270
    15681868    		 Assembly2
    protein:GB:50~238 5~7,13
    protein:HU:54~238 9~13
    3466 4v99:Hc
    (2.9Å)
    		 17 N/A URS000080E112 N/A Panicum
    mosaic
    virus
    strain
    Kansas
    109S
    652599    		 23123270
    15681868    		 Assembly2
    protein:HZ:54~238 7,9~13
    protein:IQ:50~238 5~6
    3467 4v99:Hh
    (2.9Å)
    		 17 N/A URS000080E112 N/A Panicum
    mosaic
    virus
    strain
    Kansas
    109S
    652599    		 23123270
    15681868    		 Assembly2
    protein:Ff:50~238 5~7
    protein:He:54~238 7,9~13
    3468 4v99:Hm
    (2.9Å)
    		 17 N/A URS000080E112 N/A Panicum
    mosaic
    virus
    strain
    Kansas
    109S
    652599    		 23123270
    15681868    		 Assembly2
    protein:Hj:54~238 9~13
    3469 4v99:Hr
    (2.9Å)
    		 17 N/A URS000080E112 N/A Panicum
    mosaic
    virus
    strain
    Kansas
    109S
    652599    		 23123270
    15681868    		 Assembly2
    protein:Ho:54~238 7,9~13
    protein:Iu:50~238 5~7,13
    3470 4v99:Hw
    (2.9Å)
    		 17 N/A URS000080E112 N/A Panicum
    mosaic
    virus
    strain
    Kansas
    109S
    652599    		 23123270
    15681868    		 Assembly2
    protein:HQ:50~238 5~7,13
    protein:Ht:54~238 7,9~13
    3471 4v99:I2
    (2.9Å)
    		 17 N/A URS000080E112 N/A Panicum
    mosaic
    virus
    strain
    Kansas
    109S
    652599    		 23123270
    15681868    		 Assembly2
    protein:HG:50~238 5~7,13
    protein:Iy:54~238 7,9~13
    3472 4v99:I7
    (2.9Å)
    		 17 N/A URS000080E112 N/A Panicum
    mosaic
    virus
    strain
    Kansas
    109S
    652599    		 23123270
    15681868    		 Assembly2
    protein:I4:54~238 7,9~13
    protein:JB:50~238 5~7,13
    3473 4v99:ID
    (2.9Å)
    		 17 N/A URS000080E112 N/A Panicum
    mosaic
    virus
    strain
    Kansas
    109S
    652599    		 23123270
    15681868    		 Assembly2
    protein:Gp:50~238 5~7,13
    protein:IA:54~238 7,9~13
    3474 4v99:II
    (2.9Å)
    		 17 N/A URS000080E112 N/A Panicum
    mosaic
    virus
    strain
    Kansas
    109S
    652599    		 23123270
    15681868    		 Assembly2
    protein:FL:50~238 5~7,13
    protein:IF:54~238 7,9~13
    3475 4v99:IN
    (2.9Å)
    		 17 N/A URS000080E112 N/A Panicum
    mosaic
    virus
    strain
    Kansas
    109S
    652599    		 23123270
    15681868    		 Assembly2
    protein:Gz:50~238 5~7,13
    protein:IK:54~238 7,9~13
    3476 4v99:IS
    (2.9Å)
    		 17 N/A URS000080E112 N/A Panicum
    mosaic
    virus
    strain
    Kansas
    109S
    652599    		 23123270
    15681868    		 Assembly2
    protein:IP:54~238 7,9~13
    protein:Jp:50~238 5~7,13
    3477 4v99:IX
    (2.9Å)
    		 17 N/A URS000080E112 N/A Panicum
    mosaic
    virus
    strain
    Kansas
    109S
    652599    		 23123270
    15681868    		 Assembly2
    protein:IU:54~238 9~13
    protein:Ip:50~238 5,13
    3478 4v99:Ic
    (2.9Å)
    		 17 N/A URS000080E112 N/A Panicum
    mosaic
    virus
    strain
    Kansas
    109S
    652599    		 23123270
    15681868    		 Assembly2
    protein:HL:50~238 5~7,13
    protein:IZ:54~238 7~13
    3479 4v99:Ih
    (2.9Å)
    		 17 N/A URS000080E112 N/A Panicum
    mosaic
    virus
    strain
    Kansas
    109S
    652599    		 23123270
    15681868    		 Assembly2
    protein:Fz:50~238 5~7,13
    protein:Ie:54~238 7,9~13
    3480 4v99:Im
    (2.9Å)
    		 17 N/A URS000080E112 N/A Panicum
    mosaic
    virus
    strain
    Kansas
    109S
    652599    		 23123270
    15681868    		 Assembly2
    protein:Hf:50~238 5~7,13
    protein:Ij:54~238 7,9~13
    3481 4v99:Ir
    (2.9Å)
    		 17 N/A URS000080E112 N/A Panicum
    mosaic
    virus
    strain
    Kansas
    109S
    652599    		 23123270
    15681868    		 Assembly2
    protein:HV:50~238 5~7,13
    protein:Io:54~238 7,9~12
    3482 4v99:Iw
    (2.9Å)
    		 17 N/A URS000080E112 N/A Panicum
    mosaic
    virus
    strain
    Kansas
    109S
    652599    		 23123270
    15681868    		 Assembly2
    protein:Fp:50~238 5~7,13
    protein:It:54~238 7,9~12
    3483 4v99:J2
    (2.9Å)
    		 17 N/A URS000080E112 N/A Panicum
    mosaic
    virus
    strain
    Kansas
    109S
    652599    		 23123270
    15681868    		 Assembly2
    protein:Hu:50~238 5~7,13
    protein:Jy:54~238 7~13
    3484 4v99:J7
    (2.9Å)
    		 17 N/A URS000080E112 N/A Panicum
    mosaic
    virus
    strain
    Kansas
    109S
    652599    		 23123270
    15681868    		 Assembly2
    protein:Ik:50~238 5~7,13
    protein:J4:54~238 7,9~13
    3485 4v99:JD
    (2.9Å)
    		 17 N/A URS000080E112 N/A Panicum
    mosaic
    virus
    strain
    Kansas
    109S
    652599    		 23123270
    15681868    		 Assembly2
    protein:Gf:50~238 5~7,13
    protein:JA:54~238 7,9~13
    3486 4v99:JI
    (2.9Å)
    		 17 N/A URS000080E112 N/A Panicum
    mosaic
    virus
    strain
    Kansas
    109S
    652599    		 23123270
    15681868    		 Assembly2
    protein:Fk:50~238 5~7,13
    protein:JF:54~238 7,9~13
    3487 4v99:JN
    (2.9Å)
    		 17 N/A URS000080E112 N/A Panicum
    mosaic
    virus
    strain
    Kansas
    109S
    652599    		 23123270
    15681868    		 Assembly2
    protein:H5:50~238 5~6,13
    protein:JK:54~238 7~13
    3488 4v99:JS
    (2.9Å)
    		 17 N/A URS000080E112 N/A Panicum
    mosaic
    virus
    strain
    Kansas
    109S
    652599    		 23123270
    15681868    		 Assembly2
    protein:IB:50~238 5~7,13
    protein:JP:54~238 9~12
    3489 4v99:JX
    (2.9Å)
    		 17 N/A URS000080E112 N/A Panicum
    mosaic
    virus
    strain
    Kansas
    109S
    652599    		 23123270
    15681868    		 Assembly2
    protein:JU:54~238 9~13
    protein:Ja:50~238 5~6,13
    3490 4v99:Jc
    (2.9Å)
    		 17 N/A URS000080E112 N/A Panicum
    mosaic
    virus
    strain
    Kansas
    109S
    652599    		 23123270
    15681868    		 Assembly2
    protein:JZ:54~238 9~13
    protein:Jf:50~238 5~7,13
    3491 4v99:Jh
    (2.9Å)
    		 17 N/A URS000080E112 N/A Panicum
    mosaic
    virus
    strain
    Kansas
    109S
    652599    		 23123270
    15681868    		 Assembly2
    protein:Je:54~238 7,9~13
    protein:Jk:50~238 5~7,13
    3492 4v99:Jm
    (2.9Å)
    		 17 N/A URS000080E112 N/A Panicum
    mosaic
    virus
    strain
    Kansas
    109S
    652599    		 23123270
    15681868    		 Assembly2
    protein:FB:50~238 5,13
    protein:Jj:54~238 7,9~13
    3493 4v99:Jr
    (2.9Å)
    		 17 N/A URS000080E112 N/A Panicum
    mosaic
    virus
    strain
    Kansas
    109S
    652599    		 23123270
    15681868    		 Assembly2
    protein:GV:50~238 5~7,13
    protein:Jo:54~238 7,9~13
    3494 4v99:Jw
    (2.9Å)
    		 17 N/A URS000080E112 N/A Panicum
    mosaic
    virus
    strain
    Kansas
    109S
    652599    		 23123270
    15681868    		 Assembly2
    protein:Fa:50~238 5~6,13
    protein:Jt:54~238 7,9~13
    3495 4v9a:AA
    (3.2999Å)
    		 1506 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DEDF RF00177 Thermus
    thermophilus
    HB8
    300852    		 23431179 Assembly1
    protein:AE:4~240 828,1073~1075,1099,1101~1102,1
    104~1105
    protein:AF:2~206 421,1055~1058,1060~1061,1106~1
    109,1111~1112,1189~1192,1196,1
    206,1256~1257
    protein:AG:2~209 8,401~410,412~413,425~430,436~
    439,495,508~512,541~547,614,61
    9~620
    protein:AH:5~155 6~9,15~16,18~19,559,921~923,10
    69~1071,1073~1074,1078~1081,13
    98
    protein:AI:1~101 673~674,710,737~739
    protein:AJ:2~156 932~933,935,939~940,1239~1240,
    1291~1292,1297~1298,1346,1350~
    1351,1372~1382
    protein:AK:1~138 564,586~587,589~591,598~600,64
    0,642~644,653,756,823~825,828,
    875~878
    protein:AL:2~128 943,966~967,970,1117~1119,1128
    ~1130,1147~1149,1177~1180,1186
    ~1188,1231~1233,1249~1251,1291
    ,1342~1344,1346~1350,1366~1369
    ,1371~1373
    protein:AM:3~101 963~964,969,972~973,975,1059~1
    061,1123~1125,1150~1153,1189,1
    198~1199,1252~1255,1279~1280,1
    366~1367
    protein:AN:11~129 675,677,683~686,688~692,694~69
    5,704,706~708,716,718,778~780,
    797,1523~1525
    protein:AO:5~129 33~37,303,362~363,500~503,519~
    523,525~529,537~539,552~553,56
    2~564,567~568,879~881,911~913
    protein:AP:2~117 946~954,1225~1229,1295~1297,13
    01~1302,1306~1310,1321,1328~13
    32
    protein:AQ:2~61 973~976,979~981,983,994~995,10
    15~1016,1047~1049,1059,1114~11
    15,1186~1187,1202~1203,1216~12
    19,1316~1317,1358~1360
    protein:AR:2~89 579~582,656~658,660,666~669,72
    8,730,739~742,750~754,764,808
    protein:AS:1~84 44,110,112,134~137,227~231,309
    ~310,375~377,390~393,449~450,4
    52~453,467~468,474~475,607~609
    ,624~627
    protein:AT:2~101 127~128,130,189,234~238,246~24
    7,253~256,264~267,275~280,564,
    584~586,635~636,760
    protein:AU:17~88 663~664,673~674,718~720,734~73
    6,834~836
    protein:AV:2~84 955~959,986~987,1013~1014,1219
    ~1221,1226~1227,1310,1312~1320
    protein:AW:8~106 103,107~108,132,176~177,185~18
    6,186A,186B,191F,191~193,195~1
    96,259~263,322~325,332~333,145
    3~1455,1459
    protein:AX:2~26 1235~1236,1243~1245,1268~1270,
    1286~1287,1304~1305,1325~1329,
    1364
    protein:BN:1~122 338~340,1422~1423
    protein:BR:1~137 346,1432,1443,1446,1465
    protein:B4:1~66 1311~1312
    3496 4v9a:AC
    (3.2999Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000057545F RF00005 Thermus
    thermophilus
    HB8
    300852    		 23431179 Assembly1
    protein:AL:2~128 33~35
    protein:BG:2~182 19,56~57
    3497 4v9a:BA
    (3.2999Å)
    		 2912 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E23D RF02541 Thermus
    thermophilus
    HB8
    300852    		 23431179 Assembly1
    protein:AP:2~117 887~888
    protein:AR:2~89 714~715
    protein:BD:2~273 690~692,694,705~706,727~730,76
    4,773~774,779~782,784,1354,149
    1,1500~1501,1565~1569,1693,169
    5,1788~1792,1795~1801,1803~180
    6,1811~1830,1842~1845,1901~190
    3,1971,2073,2075,2085~2086,220
    7~2208,2217~2219,2224,2227~222
    8,2239,2590~2591,2596,2599
    protein:BE:1~205 574,744~745,1130,1654~1658,167
    0,1673,1675,1993~1994,1997~199
    9,2024~2025,2032,2048,2050~205
    3,2511~2514,2571~2572,2574~257
    5,2578~2580,2618~2621,2633,263
    5~2638,2679~2683,2723,2729~273
    0,2733,2771~2773,2784~2788,281
    0~2811,2820~2823,2829~2831
    protein:BF:6~207 38~39,319~323,442~444,448~449,
    451~452,468~470,586,588~590,59
    8~601,606~608,614~619,659~661,
    671,673~675,797~798,801,1202,1
    205,1244~1248,1254~1258,2059~2
    061,2444
    protein:BG:2~182 2302~2307,2310~2316
    protein:BH:2~171 1035~1036,1049~1050,1092~1093,
    1112~1113,2530~2531,2653,2657~
    2659,2666~2668,2744~2751,2758,
    2761
    protein:BK:1~146 270L,270N,270O,270P,270Q,270R,
    2092~2094,2198~2199
    protein:BM:1~138 6~8,528,557~558,995,1005~1007,
    1009,1012,1021~1022,1131~1132,
    1138~1141,1143,2640~2642,2768,
    2780
    protein:BN:1~122 1664~1669,1952,1995~1996,2547,
    2561~2563,2565~2566,2673~2675,
    2683~2685,2727
    protein:BO:1~150 195~196,229,244~246,251~252,38
    5,389,411,566~567,587,598~599,
    603~604,622,624~627,631,636~63
    7,660~664,666,670~671,805~807,
    810~811,813,825~826,831~833,94
    2~943,1189~1191,1203,1242~1246
    ,1250,2392~2394,2404~2406,2414
    ~2417,2428~2429
    protein:BP:1~141 862~864,870~871,906~908,910~91
    2,952~960,1029~1030,2250~2251,
    2275~2277,2467~2470,2483~2486,
    2493~2496
    protein:B0:1~118 1275~1279,1287,1294~1295,1327~
    1328,1454,1649~1654,2000~2002,
    2690,2705~2710,2713,2721~2723,
    2817~2818,2820~2821,2838~2840,
    2850~2852,2869~2871,2873,2880~
    2882
    protein:BQ:2~112 2292~2296,2319,2334,2376~2379
    protein:BR:1~137 1753~1755,2682~2685,2717~2719,
    2845~2849,2863~2865,2867,2875~
    2876
    protein:B1:2~118 17~20,29~30,443~446,449,532~53
    6,559~561,563~564,580~584,992~
    998,1009~1012,1151~1153,1155~1
    156,1198~1199,1215~1217,1220,1
    228,1248~1252,2018~2021
    protein:B2:1~101 564~566,571~573,814~815,992~99
    4,1160~1163,1187~1188,1224~122
    7
    protein:BS:1~113 23~26,486~489,491,493~496,508,
    518~519,747~748,751,1261~1262,
    1266,1322~1323,1614~1615,2009~
    2014
    protein:BT:3~94 58~59,64~65,71,137A,138~139,14
    1A,142,456,1311~1312,1335~1342
    ,1394,1398~1399,1598~1601
    protein:BU:2~103 84~85,104,297~298,300,310,327~
    329,335~336,480~484,499
    protein:BV:1~175 875~876,896,904,1041
    protein:B3:10~85 855~858,921~923,2261~2262,2264
    ,2270~2272,2277,2279,2329~2332
    ,2334,2336,2352~2357,2363~2366
    ,2385~2387
    protein:BZ:2~98 153,189~190,205,270I,270J,270R
    ,270S,372,379~381,387~388,396~
    397,1363~1365,2079~2081,2090~2
    091,2205,2213,2230~2232,2395~2
    397,2414,2432
    protein:BW:4~69 61,72,74~78,94~96,98,102,111
    protein:BX:2~60 849~852,931~933,968~970,987~98
    9,1157~1158,1184
    protein:B5:2~60 14~17,516~517,747,1262~1264,12
    66,2015~2019,2021~2022,2045~20
    47,2054~2056,2577,2611,2614~26
    15,2623,2814~2816,2883~2884,28
    86
    protein:B6:9~53 2284~2287,2344~2348,2370~2372,
    2399~2401,2418~2419
    protein:B7:1~49 54,124~126,180,210,458~459,464
    ~469,682~688,752,770~771,788~7
    89,1309~1311,1367,1378,1600~16
    01,1612~1613,1619~1620
    protein:B8:2~62 242~243,245~247,249~251,253~25
    4,591~594,628~631,650~651,666,
    834,2349~2350,2361,2365,2382,2
    392~2393,2418~2422
    3498 4v9a:BB
    (3.2999Å)
    		 122 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00005AB4A7 RF00001 Thermus
    thermophilus
    HB8
    300852    		 23431179 Assembly1
    protein:BG:2~182 31,41~45,55~57
    protein:BP:1~141 90~91
    protein:BQ:2~112 6~9,27~30,37~38,48~52,112~114,
    116
    protein:BV:1~175 73~77,92,102~105
    protein:B3:10~85 11~12
    protein:BX:2~60 83~84
    protein:B4:1~66 40,42~44
    3499 4v9a:CA
    (3.2999Å)
    		 1506 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DEDF RF00177 Thermus
    thermophilus
    HB8
    300852    		 23431179 Assembly2
    protein:CE:4~240 1073~1076,1098~1102,1104~1105,
    1158
    protein:CF:2~207 421,532,1055~1057,1059~1060,11
    06~1109,1111~1112,1189~1192,12
    05~1206,1257
    protein:CG:2~209 5~6,8,400~401,403~411,413,425~
    430,436~438,489~490,495,498,50
    8~509,511~512,541~547,619~620
    protein:CH:5~155 5~10,15~16,18~19,559,864,921~9
    23,1069~1070,1072~1073,1078~10
    81,1194,1396,1398
    protein:CI:1~101 673~674,736~739
    protein:CJ:2~156 932~933,935,938~940,1092,1172~
    1173,1239~1241,1289~1291,1297~
    1298,1346,1350~1351,1372~1381
    protein:CK:1~138 564,586~587,589~591,598~600,64
    0~644,652~653,823,825~827,875~
    878
    protein:CL:2~128 942~943,967,1117~1119,1127~113
    1,1147~1149,1178~1180,1186~118
    7,1231~1233,1249~1251,1289,129
    1~1292,1342~1344,1346~1350,136
    6~1373
    protein:CM:3~101 963~964,972~973,975,1059~1061,
    1115,1123~1125,1150~1153,1189,
    1198~1199,1253~1255,1279~1281,
    1366~1368
    protein:CN:11~129 674~677,684~686,688~692,694~69
    5,704,706~708,715~716,718,778~
    779,798,1523~1525
    protein:CO:5~129 33~37,49,363,501~503,518~523,5
    26,528~529,537~539,550~553,562
    ~564,567~568,585,880~881,909~9
    10,1491
    protein:CP:2~118 946~954,1225~1228,1295~1297,13
    01~1302,1306~1310,1320~1321,13
    28~1332
    protein:CQ:2~61 973~977,979~983,994~995,1015~1
    016,1048~1049,1113~1115,1186~1
    188,1202~1204,1216~1219,1316~1
    318,1359~1360,1369
    protein:CR:2~89 579~582,656~659,666~668,728~73
    0,739~742,750~751,753~755,764
    protein:CS:1~84 110,134~137,227,229~230,310,37
    5~377,390~393,449~450,452~453,
    468,474~475,607~609,624~627
    protein:CT:2~101 127~130,189,234~238,247,253~25
    6,264~267,275~280,564,584~585,
    635~636,760
    protein:CU:17~88 663~664,673~674,718~721,734~73
    6,835~836
    protein:CV:7~84 955~958,979,986,1013~1015,1219
    ~1223,1225~1227,1313~1314,1316
    ,1318~1322
    protein:CW:8~106 103~104,107~108,132~133,176~17
    7,185~186,186A,186B,191F,191~1
    93,195~196,259,261~263,322~324
    ,332,1440,1453~1455,1459
    protein:CX:2~26 1235~1236,1243,1262,1266,1268~
    1270,1286,1288~1289,1304~1305,
    1325~1328,1352~1353
    protein:DD:2~273 712~713,773~774
    protein:DN:1~122 339,1422~1423
    protein:DR:1~137 345~346,1431~1432,1442~1443,14
    46,1464~1465
    3500 4v9a:CC
    (3.2999Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000057545F RF00005 Thermus
    thermophilus
    HB8
    300852    		 23431179 Assembly2
    protein:CL:2~128 32~33,35
    protein:DG:2~182 19,56~57
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    Reference:
  • Chengxin Zhang, Lydia Freddolino (2024) "FURNA: a database for function annotations of RNA structures," PLOS Biology 22(7): e3002476.