SEQ2FUN

FURNA
Download all results in tab-seperated text for 15266 RNAs.
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  • Hover over Ligand to view the name of the ligand and the ligand-binding nucleotides on the RNA.

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    # PDB
    (Resolution)    		 Length EC number
    & GO term     		RNAcentral Rfam Taxon PubMed ATtRACT
    motif     		Ligand &
    binding nucleotides
    501 2bbv:N
    (2.8Å)
    		 10 N/A URS000080E1B1 N/A synthetic
    construct
    32630    		 8289282 Assembly1
    protein:C:20~363 8~10
    502 2bh2:C
    (2.15Å)
    		 30 N/A URS000080E351 N/A Escherichia
    coli
    562    		 15766524
    15016356    		 Assembly1
    protein:A:15~432 1932~1935,1937~1943,1946,1948,
    1951~1957
    503 2bh2:D
    (2.15Å)
    		 30 N/A URS000080E351 N/A Escherichia
    coli
    562    		 15766524
    15016356    		 Assembly2
    protein:B:16~431 1932~1935,1937~1943,1951~1958
    504 2bny:R
    (3.0Å)
    		 15 N/A URS000080DDB6 N/A Escherichia
    phage
    MS2
    12022    		 16531233 Assembly1
    protein:A:1~129 11~12
    protein:B:1~129 6,8~9
    505 2bny:S
    (3.0Å)
    		 13 N/A URS000080DDB6 N/A Escherichia
    phage
    MS2
    12022    		 16531233 Assembly1
    protein:C:1~129 11~12
    protein:C-6:1~129 6,8~9
    506 2bq5:R
    (2.91Å)
    		 19 N/A URS000080DDB6 RF02359 Escherichia
    phage
    MS2
    12022    		 16531233 Assembly1
    protein:A:1~129 11~12
    protein:B:1~129 6~9
    507 2bq5:S
    (2.91Å)
    		 17 N/A URS000080DDB6 N/A Escherichia
    phage
    MS2
    12022    		 16531233 Assembly1
    protein:C:1~129 2~3,11~12
    protein:C-6:1~129 5~9
    508 2bs0:R
    (2.45Å)
    		 12 N/A URS000080E387 N/A Escherichia
    phage
    MS2
    12022    		 16531233 Assembly1
    protein:A:1~129 11~12
    protein:B:1~129 7~9
    509 2bs1:R
    (2.8Å)
    		 12 N/A URS000080DDA5 N/A Escherichia
    phage
    MS2
    12022    		 16531233 Assembly1
    protein:A:1~129 11~12
    protein:B:1~129 7~9
    510 2bs1:S
    (2.8Å)
    		 11 N/A URS000080DDA5 N/A Escherichia
    phage
    MS2
    12022    		 16531233 Assembly1
    protein:C:1~129 10~12
    protein:C-6:1~129 7~9
    511 2bte:B
    (2.9Å)
    		 78 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080E1BC RF00005 Thermus
    thermophilus
    274    		 16155583 Assembly1
    protein:A:1~876 4,12~13,19~20,22~26,47E,56,70~
    76
    512 2bte:E
    (2.9Å)
    		 78 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080E1BC RF00005 Thermus
    thermophilus
    274    		 16155583 Assembly2
    protein:D:1~876 4,12~14,19~20,22~26,47E,56,70~
    76
    513 2bu1:R
    (2.2Å)
    		 17 N/A URS000080DDB6 N/A Escherichia
    phage
    MS2
    12022    		 11720290 Assembly1
    protein:A:1~129 3,11~12
    protein:B:1~129 6,8~9,11
    514 2bu1:S
    (2.2Å)
    		 17 N/A URS000080DDB6 N/A Escherichia
    phage
    MS2
    12022    		 11720290 Assembly1
    protein:C:1~129 3,11~12
    protein:C-6:1~129 6,8~9,11
    515 2bx2:R
    (2.85Å)
    		 14 N/A URS000080E356 N/A synthetic
    construct
    32630    		 16237448 Assembly1
    protein:L:-6~510 1~3
    516 2byt:B
    (3.3Å)
    		 78 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080E1BC RF00005 Thermus
    thermophilus
    274    		 16155583 Assembly1
    protein:A:1~876 12~13,19~20,22~26,56~57,74~76
    517 2byt:E
    (3.3Å)
    		 78 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080E1BC RF00005 Thermus
    thermophilus
    274    		 16155583 Assembly2
    protein:D:1~876 4,12~14,20,22~25,56,72,74~76
    518 2c0b:R
    (3.18Å)
    		 11 N/A URS000080DE0C N/A synthetic
    construct
    32630    		 16237448 Assembly1
    protein:L:-6~509 1~2,5~10
    519 2c4q:R
    (2.38Å)
    		 17 N/A URS000080DDB6 N/A Escherichia
    phage
    MS2
    12022    		 11720290 Assembly1
    protein:A:1~129 3,10~12
    protein:B:1~129 6,8~9
    520 2c4q:S
    (2.38Å)
    		 17 N/A URS000080DDB6 N/A Escherichia
    phage
    MS2
    12022    		 11720290 Assembly1
    protein:C:1~129 3,10~12
    protein:C-6:1~129 6,8~9
    521 2c4r:R
    (3.6Å)
    		 10 N/A URS000080DE84 N/A Escherichia
    coli
    562    		 16237448 Assembly1
    protein:L:-6~503 1~2,6~8,10
    522 2c4y:R
    (2.68Å)
    		 17 N/A URS000080DDB6 N/A Escherichia
    phage
    MS2
    12022    		 11720290 Assembly1
    protein:A:1~129 2~3,11~12
    protein:B:1~129 6,8~9
    523 2c4y:S
    (2.68Å)
    		 13 N/A URS000080DDB6 N/A Escherichia
    phage
    MS2
    12022    		 11720290 Assembly1
    protein:C:1~129 11~12
    protein:C-6:1~129 6,8~9
    524 2c4z:R
    (2.6Å)
    		 17 N/A URS000080DDB6 N/A Escherichia
    phage
    MS2
    12022    		 11720290 Assembly1
    protein:A:1~129 2,11~12
    protein:B:1~129 6,8~9
    525 2c4z:S
    (2.6Å)
    		 13 N/A URS000080DDB6 N/A Escherichia
    phage
    MS2
    12022    		 11720290 Assembly1
    protein:C:1~129 11~12
    protein:C-6:1~129 6,8~9
    526 2c50:R
    (2.65Å)
    		 14 N/A URS000080E1EC N/A Escherichia
    phage
    MS2
    12022    		 11720290 Assembly1
    protein:A:1~129 11~12
    protein:B:1~129 6,8~9
    527 2c50:S
    (2.65Å)
    		 13 N/A URS000080E1EC N/A Escherichia
    phage
    MS2
    12022    		 11720290 Assembly1
    protein:C:1~129 11~12
    protein:C-6:1~129 6,8~9
    528 2c51:R
    (2.8Å)
    		 15 N/A URS000080E255 N/A Escherichia
    phage
    MS2
    12022    		 11720290 Assembly1
    protein:A:1~129 11~12
    protein:B:1~129 6,8~9
    529 2c51:S
    (2.8Å)
    		 13 N/A URS000080E255 N/A Escherichia
    phage
    MS2
    12022    		 11720290 Assembly1
    protein:C:1~129 11~12
    protein:C-6:1~129 6,8~9
    530 2csx:C
    (2.7Å)
    		 75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080E079 RF00005 Aquifex
    aeolicus
    63363    		 16155581 Assembly1
    protein:A:1~497 32~36,38~41,70,72
    531 2csx:D
    (2.7Å)
    		 75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080E079 RF00005 Aquifex
    aeolicus
    63363    		 16155581 Assembly2
    protein:B:1~497 32~36,38~41,70~72
    532 2ct8:C
    (2.7Å)
    		 74 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000051626E RF00005 Aquifex
    aeolicus
    63363    		 16155581 Assembly1
    protein:A:1 34~36,38~40,70~71
    533 2ct8:D
    (2.7Å)
    		 74 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000051626E RF00005 Aquifex
    aeolicus
    63363    		 16155581 Assembly2
    protein:B:1 25,33~36,38~41,71~72
    534 2cv0:C
    (2.4Å)
    		 75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000052BB59 RF00005 Thermus
    thermophilus
    274    		 17161369 Assembly1
    protein:A:1~468 503,505,511~514,524~525,534~53
    8,569~571,574~576
    535 2cv0:D
    (2.4Å)
    		 75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000052BB59 RF00005 Thermus
    thermophilus
    274    		 17161369 Assembly2
    protein:B:1~468 503~506,511~513,524~526,534~53
    8,569~570,574~576
    536 2cv1:C
    (2.41Å)
    		 75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000052BB59 RF00005 Thermus
    thermophilus
    274    		 N/A Assembly1
    protein:A:1~468 503,505,511~514,524~525,534~53
    8,569~571,574~576
    537 2cv1:D
    (2.41Å)
    		 75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000052BB59 RF00005 Thermus
    thermophilus
    274    		 N/A Assembly2
    protein:B:1~468 502~506,511~513,524~525,534~53
    8,568~570,573~576
    538 2cv2:C
    (2.69Å)
    		 75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000052BB59 RF00005 Thermus
    thermophilus
    274    		 17161369 Assembly1
    protein:A:1~468 503~506,511~514,524~525,534~53
    9,569~571,573~576
    539 2cv2:D
    (2.69Å)
    		 75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000052BB59 RF00005 Thermus
    thermophilus
    274    		 17161369 Assembly2
    protein:B:1~468 503~506,511~515,524~525,534~53
    9,568~571,574~576
    540 2czj:B
    (3.01Å)
    		 62 GO:0006401 (P) RNA catabolic process URS000080DD57 RF00023 Thermus
    thermophilus
    HB8
    300852    		 17488812 Assembly1
    protein:A:2~123 7~8,14~20,47~49,67~68
    541 2czj:D
    (3.01Å)
    		 62 GO:0006401 (P) RNA catabolic process URS000080DD57 RF00023 Thermus
    thermophilus
    HB8
    300852    		 17488812 Assembly2
    protein:C:2~123 7~8,15~20,47~49
    542 2czj:F
    (3.01Å)
    		 62 GO:0006401 (P) RNA catabolic process URS000080DD57 RF00023 Thermus
    thermophilus
    HB8
    300852    		 17488812 Assembly3
    protein:E:2~123 7~8,14~20,47~49,67~68
    543 2czj:H
    (3.01Å)
    		 62 GO:0006401 (P) RNA catabolic process URS000080DD57 RF00023 Thermus
    thermophilus
    HB8
    300852    		 17488812 Assembly4
    protein:G:4~123 7,16~20,47~49,67
    544 2d3o:0
    (3.35Å)
    		 2802 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DEF1 RF02540
    RF02541    		 Deinococcus
    radiodurans
    1299    		 16271892 Assembly1
    protein:R:2~94 57,63~64,136,1325,1348~1350,13
    52,1354,1404~1405,1412,1613~16
    18
    protein:S:4~113 34,83~86,100,308~310,321,337~3
    39,347~349,490,492~494
    protein:W:1~66 59~60,71,73,75,93~95
    protein:1:10~109 1330,1405
    545 2d6f:E
    (3.15Å)
    		 72 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080E128 RF00005 Methanothermobacter
    thermautotrophicus
    145262    		 16809540 Assembly1
    protein:C:1~503 901,904,952~953,961~963
    546 2d6f:F
    (3.15Å)
    		 74 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080E128 RF00005 Methanothermobacter
    thermautotrophicus
    145262    		 16809540 Assembly1
    protein:D:1~538 901,904,953~954,961~963,973~97
    4
    547 2der:C
    (3.1Å)
    		 74 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000037E2FF RF00005 Escherichia
    coli
    562    		 16871210 Assembly1
    protein:A:5~368 11~12,24~27,33~39
    548 2der:D
    (3.1Å)
    		 71 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000037E2FF RF00005 Escherichia
    coli
    562    		 16871210 Assembly2
    protein:B:4 11~12,23~27,33~39
    549 2det:C
    (3.4Å)
    		 70 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000037E2FF RF00005 Escherichia
    coli
    562    		 16871210 Assembly1
    protein:A:4 11~12,24~27,33~39
    550 2deu:C
    (3.4Å)
    		 74 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000037E2FF RF00005 Escherichia
    coli
    562    		 16871210 Assembly1
    protein:A:5~368 11~12,24~27,33~39
    551 2deu:D
    (3.4Å)
    		 74 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000037E2FF RF00005 Escherichia
    coli
    562    		 16871210 Assembly2
    protein:B:5~368 11~12,24~27,33~39
    552 2dlc:Y
    (2.4Å)
    		 74 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080E110 RF00005 Saccharomyces
    cerevisiae
    4932    		 17576676 Assembly1
    protein:X:8~356 534~536,569
    protein:X-2:8~356 501,570~575
    553 2dr2:B
    (3.0Å)
    		 75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00002CF5C7 RF00005 Bos
    taurus
    9913    		 16798914 Assembly1
    protein:A:97~469 33~37,70
    protein:A-2:97~469 1,68,70,73~76
    554 2dr5:B
    (2.8Å)
    		 32 N/A URS000080E16A N/A synthetic
    construct
    32630    		 17051158 Assembly1
    protein:A:1 1~4,14~15,21~24,30~32
    555 2dr7:B
    (2.8Å)
    		 33 N/A URS000080E213 N/A synthetic
    construct
    32630    		 17051158 Assembly1
    protein:A:1 1~3,14~16,21~24,31~33
    556 2dr8:B
    (2.5Å)
    		 33 N/A URS000080E213 N/A synthetic
    construct
    32630    		 17051158 Assembly1
    protein:A:1 1~3,14~16,21~24,31~33
    557 2dr9:B
    (2.8Å)
    		 34 N/A URS000080E0BF N/A synthetic
    construct
    32630    		 17051158 Assembly1
    protein:A:1 1~3,14~15,21~24,31~34
    558 2dra:B
    (2.5Å)
    		 34 N/A URS000080E0BF N/A synthetic
    construct
    32630    		 17051158 Assembly1
    protein:A:1 1~3,14~16,21~24,31~34
    559 2drb:B
    (2.8Å)
    		 35 N/A URS000080DECC N/A synthetic
    construct
    32630    		 17051158 Assembly1
    protein:A:1~437 1~2,14~15,21~24,31~35
    560 2du3:D
    (2.6Å)
    		 71 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080E059 RF00005 Archaeoglobus
    fulgidus
    2234    		 17351629 Assembly1
    protein:A:1~534 933~937
    561 2du4:C
    (2.8Å)
    		 71 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080E059 RF00005 Archaeoglobus
    fulgidus
    2234    		 17351629 Assembly1
    protein:A:1~534 933~937
    562 2du5:D
    (3.2Å)
    		 71 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080E26B RF00005 Archaeoglobus
    fulgidus
    2234    		 17351629 Assembly1
    protein:A:1~534 933~937
    563 2du6:D
    (3.3Å)
    		 71 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080E16C RF00005 Archaeoglobus
    fulgidus
    2234    		 17351629 Assembly1
    protein:A:1~534 934~936
    564 2dvi:B
    (2.61Å)
    		 34 N/A URS000080E0BF N/A synthetic
    construct
    32630    		 17051158 Assembly1
    protein:A:3 1~3,15~16,21~24,31~34
    565 2dxi:C
    (2.2Å)
    		 75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000052BB59 RF00005 Thermus
    thermophilus
    274    		 17161369 Assembly1
    protein:A:1~468 503,505,511~514,524~525,534~53
    9,569~571,574~576
    566 2dxi:D
    (2.2Å)
    		 75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000052BB59 RF00005 Thermus
    thermophilus
    274    		 17161369 Assembly2
    protein:B:1~468 503~506,511~513,524~525,534~53
    8,569~570,574~576
    567 2e2h:R
    (3.95Å)
    		 10 N/A URS000080E03D N/A synthetic
    construct
    32630    		 17129781 Assembly1
    protein:A:2~1445 1,10
    protein:B:20~1223 2,8~10
    568 2e2i:R
    (3.41Å)
    		 10 N/A URS000080E03D N/A synthetic
    construct
    32630    		 17129781 Assembly1
    protein:A:3~1449 1~2,10
    protein:B:20~1224 6,8~10
    569 2e5l:A
    (3.3Å)
    		 1517 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E378 RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    274    		 17355865 Assembly1
    protein:B:7~228 829,1073~1075,1099~1104,1111
    protein:C:2~207 421,532,1055~1058,1060~1061,11
    07~1109,1111~1113,1189~1191,12
    05~1206,1256
    protein:D:2~209 8,400~413,426~430,436~438,489~
    490,499,508~509,511~512,541~54
    7,616,619~620
    protein:E:5~154 5~9,15~16,18~20,559,864,921~92
    2,1069~1070,1072~1074,1078~108
    1,1396~1398
    protein:F:1~101 670~671,673~674,710~711,736~73
    8
    protein:G:2~156 932~933,935,939~940,1092,1173,
    1239~1241,1290~1292,1297~1298,
    1346,1350~1351,1373~1380
    protein:H:1~138 4,564,586~587,590~591,597~600,
    632,640~643,653,755,823~828,86
    0~861,874~878
    protein:I:2~128 966~968,1117~1119,1127~1131,11
    47~1149,1178~1180,1186~1188,12
    31~1233,1248~1252,1291~1292,13
    42~1344,1346~1351,1366~1373
    protein:J:3~100 963~964,972~973,975,1059~1061,
    1123~1125,1150~1153,1189,1198~
    1199,1254~1255,1278~1280,1366~
    1368
    protein:K:11~125 675~677,683~692,694~695,704,70
    6~708,716,718,778~780,1523
    protein:L:5~128 24,33~37,49,241,362~363,501~50
    3,518~523,526,528~529,537~539,
    552~553,556,562,564,567~568,58
    5,880~881,909~913,1491
    protein:M:2~123 946~953,1225~1229,1295,1297,13
    02,1306~1310,1321,1328~1330
    protein:N:2~61 973~976,979~983,1047~1049,1060
    ,1114~1115,1186~1189,1202~1203
    ,1216~1219,1316~1317,1358~1359
    ,1368~1369
    protein:O:2~89 579,583,656~660,667~669,728,73
    9~741,750~755,764,807~808
    protein:P:1~83 43~44,110,112,134~137,228~230,
    309~311,375~377,389~393,449~45
    0,452,454,462~463,474,608,617,
    624~627
    protein:Q:2~105 127~130,190E,234~238,246~247,2
    53~256,264~267,275~280,564,584
    ,586,760,762
    protein:R:16~88 663~664,674,718~720,734~736,83
    5
    protein:S:2~81 957~958,986,1014,1219~1227,131
    0~1314,1318~1321
    protein:T:8~106 56,61,103~105,107~108,132,175~
    177,185~188,190L,191~195,222~2
    23,259~263,323~324,333,1436,14
    38~1439,1455,1459~1460
    protein:V:2~25 1235~1236,1242~1244,1267,1269,
    1286,1304~1305,1325~1329,1352
    570 2ese:B

    		 23 N/A URS000080E2B5 N/A synthetic
    construct
    32630    		 16429156 Assembly1
    protein:A:443~523 531,533~538
    571 2ez6:C
    (2.05Å)
    		 28 N/A URS000080DE20 N/A synthetic
    construct
    32630    		 16439209 Assembly1
    protein:A:3~220 7~8,11,18~24
    protein:B:3~220 1~6,24~26
    572 2ez6:D
    (2.05Å)
    		 28 N/A URS000080DE20 N/A synthetic
    construct
    32630    		 16439209 Assembly1
    protein:A:3~220 1~6,23~26
    protein:B:3~220 7~8,11,18~24
    573 2f4v:A
    (3.8Å)
    		 1507 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E34A RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    274    		 16492561 Assembly1
    protein:B:7~243 828,1073~1075,1101~1104,1159
    protein:C:2~207 421,1055~1061,1107~1109,1111~1
    113,1190~1191,1205~1206
    protein:D:2~209 8,401~413,426~430,436~438,509,
    511~512,541~547,613,619~620
    protein:E:5~154 6~10,15~16,18~19,559~560,921~9
    22,1069~1070,1074,1077~1081,11
    94,1397
    protein:F:1~101 673~674,737~738
    protein:G:2~156 932~933,935,938~940,1239~1241,
    1291~1292,1297~1298,1346,1351,
    1373~1380
    protein:H:1~138 586~587,590~591,598~600,640~64
    4,653,753,824~826,875~878
    protein:I:2~128 943,967,1117~1119,1127~1130,11
    47~1149,1177~1180,1186~1188,12
    31~1232,1248~1251,1291,1342~13
    50,1367~1369,1371~1373
    protein:J:3~100 963~964,969,972~973,975,1060~1
    061,1123~1125,1150~1153,1189,1
    255,1279~1280,1366,1368
    protein:K:11~129 675~676,684~686,688~692,694~69
    5,704,706~708,716,718,779~780,
    796~797,1523~1525
    protein:L:5~129 33~37,49,302~303,362~363,500~5
    03,520~523,525~526,528~529,537
    ~539,552~553,562~564,567~568,5
    85,880~881,910~912,1492
    protein:M:2~126 947~954,969~970,1225~1230,1295
    ,1297,1302,1307~1310,1320~1321
    ,1328~1330
    protein:N:2~61 973~976,980~981,983,1016,1047~
    1048,1060,1114~1115,1188~1189,
    1202~1203,1216~1219,1316~1317,
    1358~1359,1369
    protein:O:2~89 579~581,656~659,667~669,728~73
    0,739~742,750~755,764
    protein:P:1~83 44,110,134~136,228~230,310~311
    ,375~377,390~393,449~450,452,4
    63,474,608,623~626
    protein:Q:2~105 127~130,190E,234~238,247,253~2
    56,264~265,267,273,275~280,564
    ,582~584,586,760~761
    protein:R:16~88 663~664,673~674,718~720,734~73
    6,835~836
    protein:S:2~85 955,957~958,986~987,1014,1220~
    1224,1226~1227,1310~1315,1318~
    1322
    protein:T:8~106 103~108,133,175~177,185~188,19
    0L,191~195,223,259~261,322~325
    ,332~333,1439,1454~1455,1459
    574 2f8k:B
    (2.0Å)
    		 16 N/A URS000080E2F1 N/A synthetic
    construct
    32630    		 16429151 Assembly1
    protein:A:440~523 3~9
    575 2f8s:C
    (3.0Å)
    		 22 N/A URS000080DE2C N/A synthetic
    construct
    32630    		 17027504 Assembly1
    protein:A:3~706 20~22
    576 2f8t:C
    (3.1Å)
    		 26 N/A URS000080DF6A N/A synthetic
    construct
    32630    		 17027504 Assembly1
    protein:A:3~706 23~26
    577 2fk6:R
    (2.9Å)
    		 53 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080DE34 RF00005 Bacillus
    subtilis
    1423    		 16518398 Assembly1
    protein:A:1~307 3~4,19,56,61~62,73
    protein:A-2:1~307 1,72~73
    578 2fmt:C
    (2.8Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00001BBAFC RF00005 synthetic
    construct
    32630    		 9843487 Assembly1
    protein:A:1~314 2,11~13,24~25,69~76
    579 2fmt:D
    (2.8Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00001BBAFC RF00005 synthetic
    construct
    32630    		 9843487 Assembly2
    protein:B:1~314 2,11~14,24~25,69~76
    580 2ftc:R
    (12.1Å)
    		 1443 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E087 RF02541
    RF02540    		 Bos
    taurus
    9913    		 16510155 Assembly1
    protein:C:96~306 802,1341~1342
    protein:G:13~157 515~516
    581 2fy1:B

    		 21 N/A URS000080E02C N/A synthetic
    construct
    32630    		 17318228 Assembly1
    protein:A:1~108 110~112,118~124
    582 2gic:R
    (2.92Å)
    		 45 N/A URS000080E17E N/A synthetic
    construct
    32630    		 16778022 Assembly1
    protein:A:2~422 29~33,35~37
    protein:B:2~422 20~24,26,28
    protein:C:2~422 11~15,17,19
    protein:D:2~422 2~10
    protein:E:2~422 38~42,44~45
    583 2gje:R
    (3.37Å)
    		 13 N/A URS000080DE5E N/A synthetic
    construct
    32630    		 16923390 Assembly1
    protein:A:65~221 17~21
    protein:D:27~173 12~14
    584 2gjw:E
    (2.85Å)
    		 18 N/A URS000080E337 N/A synthetic
    construct
    32630    		 16690865 Assembly1
    protein:A:1~308 14~16
    protein:B:4~307 10~11,13~14,16
    585 2gjw:F
    (2.85Å)
    		 12 N/A URS000080E0F0 N/A synthetic
    construct
    32630    		 16690865 Assembly1
    protein:A:1~308 10~11,13
    586 2gjw:I
    (2.85Å)
    		 19 N/A URS000080E337 N/A synthetic
    construct
    32630    		 16690865 Assembly2
    protein:C:1~307 13~16
    protein:D:5~308 10~11,13
    587 2gjw:J
    (2.85Å)
    		 12 N/A URS000080E0F0 N/A synthetic
    construct
    32630    		 16690865 Assembly2
    protein:C:1~307 10~11,13
    588 2go5:9
    (7.4Å)
    		 90 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E04F RF02540 Triticum
    sp.
    4569    		 16675701 Assembly1
    protein:6:17~97 2854~2857,2895,2904~2906
    589 2go5:A
    (7.4Å)
    		 127 GO:0006617 (P) SRP-dependent cotransla...
    GO:0005786 (C) signal recognition part...    		 URS000080DFD3 RF00017
    RF01856    		 Canis
    sp.
    9616    		 16675701 Assembly1
    protein:B:14~120 141~143,147~151,195~198,203~20
    4
    protein:W:326~434 184~185,192~195,207~208
    protein:1:-1~130 231~235
    590 2gtt:W
    (3.49Å)
    		 99 N/A URS000080DE2F N/A synthetic
    construct
    32630    		 16778023 Assembly1
    protein:A:6~448 42~49
    protein:B:5~448 33~40
    protein:C:5~448 24~31
    protein:D:6~448 15~19,21~22
    protein:E:6~448 6~10,12~13
    protein:F:6~448 1~4,96~99
    protein:G:6~448 87~94
    protein:H:5~448 78~82,84~85
    protein:I:6~448 69~76
    protein:J:5~448 60~68
    protein:K:5~448 51~58
    591 2gtt:X
    (3.49Å)
    		 99 N/A URS000080E002 N/A synthetic
    construct
    32630    		 16778023 Assembly2
    protein:L:5~448 1~4,96~99
    protein:M:5~448 87~94
    protein:N:6~448 78~85
    protein:O:6~448 69~76
    protein:P:5~448 60~67
    protein:Q:6~448 51~55,57~58
    protein:R:5~448 42~49
    protein:S:5~448 33~40
    protein:T:5~448 24~31
    protein:U:5~448 15~19,21~22
    protein:V:5~448 7~10,12~13
    592 2hgh:B

    		 55 N/A URS000080DF63 N/A synthetic
    construct
    32630    		 16405997 Assembly1
    protein:A:104 1,4~9,18~26,40~41
    593 2hhh:A
    (3.35Å)
    		 1505 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E226 RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 16998488 Assembly1
    protein:B:7~240 812~814,1056~1059,1084,1086~10
    87
    protein:C:2~207 417,516,1038~1041,1043,1090~10
    92,1094~1096,1171~1174,1187~11
    88,1238
    protein:D:2~209 9,27,397~408,421~426,433~434,4
    74~475,492~493,495~496,525~531
    ,600,603~604
    protein:E:5~154 7~10,16~17,19~21,543,899~901,1
    052~1053,1055~1057,1060~1065,1
    176,1380~1381
    protein:F:1~101 657~658,694~695,720~723
    protein:G:2~156 910~911,913,917~918,1075,1221~
    1223,1272~1274,1279~1280,1328,
    1332~1333,1356~1363
    protein:H:1~138 570~571,574,581~584,624~627,63
    7,737,808~810,812,839,853~856
    protein:I:2~128 944~946,1100~1102,1110~1114,11
    30~1132,1160~1162,1169,1213~12
    15,1230~1233,1273~1274,1324~13
    25,1327~1333,1349~1356
    protein:J:3~100 941~942,950~951,953,1042~1044,
    1106~1108,1133~1136,1171,1181,
    1236~1237,1261~1262,1349~1351
    protein:K:11~129 659~661,667~670,672~676,678~67
    9,688~692,700~702,761~764,781,
    1501~1503
    protein:L:5~128 34~38,50,237,358~360,484~487,5
    02~507,510~513,521~523,535~537
    ,540,546~548,551~552,858~859,8
    88~891
    protein:M:2~126 925~931,943,947~948,1207~1213,
    1277,1279,1284,1288~1292,1303~
    1304,1310~1312
    protein:N:2~61 951~954,957~961,972~973,994~99
    5,1030~1032,1043,1097~1098,116
    8~1171,1184~1185,1198~1199,120
    1,1298~1299,1339~1341,1351~135
    2
    protein:O:2~89 563~566,640~644,651~653,712,72
    3~726,734,736,738~739,748,792
    protein:P:1~83 44~45,104,106,129~132,223~226,
    306~307,371~373,386~389,445,44
    7,457~459,591,601,608~610
    protein:Q:2~105 121~123,125,190,230~233,243,24
    9~252,260~263,271~276,548,566,
    569,744~745
    protein:R:16~88 647~648,658,702~705,718~720,81
    9~820
    protein:S:2~81 935~936,964~965,993,1201~1205,
    1207,1209,1292~1297,1300~1304
    protein:T:8~106 96~98,100~102,127~128,171~173,
    180~183,197~202,219,255~257,25
    9,318~321,328~329,1422,1435~14
    38
    protein:U:2~25 1217~1218,1224~1226,1249,1251,
    1268,1286~1287,1307~1310,1334~
    1335
    594 2hvy:E
    (2.3Å)
    		 61 N/A URS000080E071 N/A synthetic
    construct
    32630    		 16943774 Assembly1
    protein:A:11~337 3~5,18,41~43,45,55~61
    protein:C:3~55 19~20,33
    protein:D:4~124 21~25,30~33
    595 2hw8:B
    (2.1Å)
    		 36 N/A URS000080E2CF N/A synthetic
    construct
    32630    		 17139090 Assembly1
    protein:A:1~228 3,7~11,13~16,28~34
    596 2i82:E
    (2.05Å)
    		 21 N/A URS000080E189 N/A synthetic
    construct
    32630    		 17188032 Assembly1
    protein:A:3~219 1206~1213,1216~1218
    597 2i82:F
    (2.05Å)
    		 21 N/A URS000080E189 N/A synthetic
    construct
    32630    		 17188032 Assembly2
    protein:B:306~519 1306~1313,1316~1318
    598 2i82:G
    (2.05Å)
    		 21 N/A URS000080E189 N/A synthetic
    construct
    32630    		 17188032 Assembly3
    protein:C:605~819 1406~1413,1416~1418
    599 2i82:H
    (2.05Å)
    		 21 N/A URS000080E189 N/A synthetic
    construct
    32630    		 17188032 Assembly4
    protein:D:904~1119 1506~1512,1516~1518
    600 2i91:D
    (2.65Å)
    		 14 N/A URS000080E00F N/A synthetic
    construct
    32630    		 17041599 Assembly1
    protein:A:5 5~15
    << < 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 > >>
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    Reference:
  • Chengxin Zhang, Lydia Freddolino (2024) "FURNA: a database for function annotations of RNA structures," PLOS Biology 22(7): e3002476.