SEQ2FUN

FURNA
Download all results in tab-seperated text for 15266 RNAs.
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  • Hover over Ligand to view the name of the ligand and the ligand-binding nucleotides on the RNA.

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    # PDB
    (Resolution)    		 Length EC number
    & GO term     		RNAcentral Rfam Taxon PubMed ATtRACT
    motif     		Ligand &
    binding nucleotides
    601 2i91:F
    (2.65Å)
    		 15 N/A URS000080E00F N/A synthetic
    construct
    32630    		 17041599 Assembly2
    protein:B:5 5~15
    602 2ihx:B

    		 75 N/A URS000080DE1F N/A synthetic
    construct
    32630    		 17070546 Assembly1
    protein:A:15 168,196~199,216~218,220~221,22
    4
    603 2ix1:B
    (2.74Å)
    		 13 N/A URS000080E227 N/A Escherichia
    coli
    BL21(DE3)
    469008    		 16957732
    16820694
    16806266
    8497196    		 Assembly1
    protein:A:1~643 1~13
    604 2iy5:T
    (3.1Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080E078 RF00005 Thermus
    thermophilus
    HB8
    300852    		 16939209 Assembly1
    protein:A:15~350 19,28,42~45,56~57
    protein:B:1~780 1,11~12,24~26,33~37
    protein:A-2:15~350 69,76
    protein:B-2:1~780 10~11,67,73~75
    605 2iz8:R
    (3.3Å)
    		 16 N/A URS000080DF8F N/A Escherichia
    phage
    MS2
    12022    		 12060685 Assembly1
    protein:A:1~129 10~12
    protein:B:1~129 6,8~9
    606 2iz8:S
    (3.3Å)
    		 13 N/A URS000080DF8F N/A Escherichia
    phage
    MS2
    12022    		 12060685 Assembly1
    protein:C:1~129 10~12
    protein:C-6:1~129 6,8~9
    607 2iz9:R
    (2.85Å)
    		 15 N/A URS000080DDB6 N/A Escherichia
    phage
    MS2
    12022    		 11095669 Assembly1
    protein:A:1~129 10,12
    protein:B-8:1~129 3~6
    608 2iz9:S
    (2.85Å)
    		 15 N/A URS000080DDB6 N/A Escherichia
    phage
    MS2
    12022    		 11095669 Assembly1
    protein:C:1~129 10,12
    protein:C-6:1~129 6~9
    609 2izm:R
    (2.7Å)
    		 13 N/A URS000080E283 N/A Escherichia
    phage
    MS2
    12022    		 12060685 Assembly1
    protein:A:1~129 10~12
    protein:B:1~129 6,8~10
    610 2izm:S
    (2.7Å)
    		 13 N/A URS000080E283 N/A Escherichia
    phage
    MS2
    12022    		 12060685 Assembly1
    protein:C:1~129 10~12
    protein:C-6:1~129 6,8~10
    611 2izn:R
    (2.56Å)
    		 15 N/A URS000080E328 N/A Escherichia
    phage
    MS2
    12022    		 12060685 Assembly1
    protein:A:1~129 11~12
    protein:B:1~129 5~6,8~9
    612 2izn:S
    (2.56Å)
    		 11 N/A URS000080E328 N/A Escherichia
    phage
    MS2
    12022    		 12060685 Assembly1
    protein:C:1~129 11~12
    protein:C-6:1~129 6,8~9
    613 2j28:8
    (9.5Å)
    		 74 GO:0006617 (P) SRP-dependent cotransla...
    GO:0048501 (C) signal recognition part...    		 URS000080E293 RF00169 Escherichia
    coli
    562    		 17086193 Assembly1
    protein:9:2~431 39,47~49,62~63
    614 2j28:A
    (9.5Å)
    		 117 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DF7E RF00001 Escherichia
    coli
    562    		 17086193 Assembly1
    protein:F:1~178 41~43,45,54~57
    protein:O:1~117 7~9,28,30,38,46~51,112~116
    protein:V:1~94 74~78,94~95,98,103
    protein:Y:1~58 82~83
    615 2j28:B
    (9.5Å)
    		 2841 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B0F34 RF02540
    RF02541    		 Escherichia
    coli
    562    		 17086193 Assembly1
    protein:0:1~56 15~17,516~517,1262~1264,1266,2
    015~2017,2020~2022,2045~2046,2
    054,2056,2614~2615,2815~2816,2
    884~2887
    protein:1:1~54 2285~2286,2344,2346,2370~2371,
    2399~2400,2418~2419
    protein:2:1~46 66,118,125~126,179~180,458~459
    ,464~467,682~684,686~688,752~7
    53,770~771,789,1309~1310,1368,
    1612,1619~1620
    protein:3:1~64 242,247,249~250,253,592~593,62
    9,631,649,651,834,2348~2351,23
    59,2361~2363,2382~2383,2391~23
    94,2419~2422
    protein:4:1~38 1031~1033,2465~2468,2477,2525~
    2529,2538~2539,2741~2743,2750,
    2755~2756
    protein:9:2~431 484~488,490,1284,1317,1535
    protein:C:3~269 690~692,728~730,764,773~774,77
    9~782,784,1354,1490~1491,1500~
    1501,1566~1569,1694~1695,1774,
    1788~1792,1796~1805,1812~1814,
    1816~1821,1824~1826,1828,1842~
    1845,1902~1903,1971,2073,2085~
    2086,2204,2227~2228,2239,2591,
    2593,2595,2597~2600
    protein:D:1~209 574,743~744,1654~1658,1675,199
    4,1997,2024~2025,2032,2051~205
    3,2511~2514,2571~2572,2574,257
    8~2581,2618~2621,2632~2633,263
    5~2637,2677~2682,2724,2729~273
    1,2772~2774,2783~2784,2786~278
    7,2810~2811,2820~2823
    protein:E:1~201 37~38,320~321,323~324,333,442~
    444,448~449,451~452,583,586~59
    0,599~600,607,613,615~617,620,
    658~660,671~675,798,801,1205,1
    244~1245,1248,1254~1257,2059~2
    060,2443~2445
    protein:F:1~178 2302~2306,2310~2316
    protein:G:1~176 1049,1092~1093,1112~1114,2529~
    2531,2653,2667,2745,2747~2749,
    2751,2757~2758
    protein:H:1~149 2092~2095,2198
    protein:I:1~141 1059~1061,1063~1064,1080~1081,
    1088,1098~1100
    protein:J:1~140 6~8,529,536,549,557~558,995,10
    05~1007,1012,1022,1131~1133,11
    38~1141,1143,2039,2515,2639~26
    42,2780,2898~2899
    protein:K:2~122 1665~1667,1669,1952,1995~1996,
    2547~2548,2561~2563,2566,2674~
    2676,2683~2685,2727~2728
    protein:L:1~144 244~245,250~251,587~588,597~59
    8,623,625~627,630~637,661~663,
    665~667,805,810~811,813,833,94
    3,1189~1190,1202~1203,1243~124
    4,2360,2392~2395,2404~2405,241
    4~2416
    protein:M:1~136 863,870~873,905~907,909~910,95
    4~958,1030,1116~1117,2250,2275
    ~2278,2466~2469,2483~2485,2493
    ~2496
    protein:N:1~127 1275~1279,1287,1294~1295,1453~
    1454,1649~1655,2002,2009,2689~
    2690,2700~2701,2706,2722~2723,
    2820~2823,2838~2840,2850~2851,
    2873~2874,2880~2882
    protein:O:1~117 2293~2294,2334,2376~2380
    protein:P:1~114 1754,2682~2685,2717~2719,2845~
    2849,2867,2876~2877
    protein:Q:1~117 17~19,28,445~446,513,515~516,5
    32~536,561,563~564,578,580~585
    ,812,992~998,1009~1012,1151~11
    54,1156,1198~1199,1216~1217,12
    19,1227,1248~1252,2018~2021
    protein:R:1~103 548,565,814,975,992~993,996,11
    61~1163,1187~1188,1223~1226
    protein:S:1~110 24~26,485~488,491~496,517,519~
    520,747~748,751,1262,1266,1323
    ,1325,1614~1615,2010~2014
    protein:T:1~99 64~65,135~136,139,143~144,456,
    1312,1338~1342,1392,1599,1601
    protein:U:1~102 83~86,99~101,297~298,308,310,3
    29,336~337,480~481,483
    protein:V:1~94 1039,1118
    protein:W:1~84 855~857,922~923,2256~2257,2261
    ~2263,2270~2271,2276~2281,2330
    ~2331,2334,2352,2354~2356,2365
    ~2366,2386~2387
    protein:X:1~63 61,72,76~78,95~96
    protein:Y:1~58 850~851,927~930,968~969,988,99
    9,1155,1157,1184
    protein:Z:1~70 188~189,199~201,372,380,395~39
    8,1364~1365,1808,2079~2081,209
    0~2092,2199~2200,2217,2230~223
    1,2433
    616 2j37:A
    (8.7Å)
    		 128 GO:0006617 (P) SRP-dependent cotransla...
    GO:0005786 (C) signal recognition part...    		 URS000080DE1E RF00017
    RF01856    		 Canis
    sp.
    9616    		 17086193 Assembly1
    protein:B:14~120 141~143,147~151,195~198,203~20
    4
    protein:W:8~488 184~185,192~195,207~208
    617 2j37:Z
    (8.7Å)
    		 280 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E01F RF02540 Haloarcula
    marismortui
    2238    		 17086193 Assembly1
    protein:4:69~149 109~112,165~166,171~172
    protein:6:17~97 44~50,62~65
    protein:W:8~488 12~14,86
    618 2ja5:P
    (3.8Å)
    		 10 N/A URS000080E343 N/A synthetic
    construct
    32630    		 17290000 Assembly1
    protein:A:2~1455 1~2,10
    protein:B:18~1224 9~10
    619 2ja6:P
    (4.0Å)
    		 10 N/A URS000080E343 N/A synthetic
    construct
    32630    		 17290000 Assembly1
    protein:A:2~1455 0~1,9
    protein:B:18~1224 0,4,7~9
    620 2ja7:3
    (3.8Å)
    		 10 N/A URS000080E343 N/A synthetic
    construct
    32630    		 17290000 Assembly1
    protein:A:2~1455 1~3,10
    protein:B:18~1224 9~10
    621 2ja7:6
    (3.8Å)
    		 10 N/A URS000080E343 N/A synthetic
    construct
    32630    		 17290000 Assembly2
    protein:M:2~1455 1~3,10
    protein:N:18~1224 9~10
    622 2ja8:P
    (3.8Å)
    		 10 N/A URS000080E07F N/A synthetic
    construct
    32630    		 17290000 Assembly1
    protein:A:2~1455 1,9
    protein:B:18~1224 4,7~9
    623 2jpp:C

    		 20 N/A URS000080E040 N/A synthetic
    construct
    32630    		 17704818 Assembly1
    protein:A:1~53 8,10~14
    protein:B:1~53 4~6,8~11,13~15
    624 2jpp:D

    		 20 N/A URS000080E040 N/A synthetic
    construct
    32630    		 17704818 Assembly1
    protein:A:1~53 4~6,8~11,13~15
    protein:B:1~53 8,10~14
    625 2jq7:B

    		 58 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E044 RF02540
    RF02541    		 Escherichia
    coli
    562    		 17169991 Assembly1
    protein:A:8~141 1058~1065,1070,1076~1082,1096~
    1098
    protein:C:0~17 1067,1095
    626 2kdq:B

    		 29 N/A URS000080E14B N/A synthetic
    construct
    32630    		 19584251 Assembly1
    protein:A:1~14 21~24,27~28,32~35
    627 2km8:A

    		 13 N/A URS000080DEA5 N/A synthetic
    construct
    32630    		 20600122 Assembly1
    protein:B:22~105 8~11,13
    protein:C:156~322 2~9,12
    628 2kmj:A

    		 28 N/A URS000080DE85 N/A Human
    immunodeficiency
    virus
    2
    11709    		 19444830 Assembly1
    protein:B:1~3 22~23
    protein:C:1~3 39~42
    629 2kx5:A

    		 29 N/A URS000080E14B N/A synthetic
    construct
    32630    		 20724442 Assembly1
    protein:B:1~18 21~24,27~28,32~36
    630 2l2k:A

    		 42 N/A URS000080E153 N/A Homo
    sapiens
    9606    		 20946981
    872

    815

    926

    970    		 Assembly1
    protein:B:43~113 6~9,14~16,29~31,38~39
    631 2l3c:B

    		 34 N/A URS000080E0B6 N/A Rattus
    norvegicus
    10116    		 20946981 Assembly1
    protein:A:1~74 79~82,89,91,93,95~97,105
    632 2l3j:B

    		 71 GO:0035195 (P) miRNA-mediated post-tra...
    GO:0016442 (C) RISC complex    		 URS000080DF7D RF02095 Rattus
    norvegicus
    10116    		 20946981 Assembly1
    protein:A:1~236 245~248,255,258,260~261,268~26
    9,277~279,287~288,290~293,299~
    300
    633 2la5:A

    		 36 N/A URS000080DFC8 N/A synthetic
    construct
    32630    		 21642970 Assembly1
    protein:B:1~17 1~5,7,17,28~29,31,34~36
    634 2lbs:A

    		 32 N/A URS000080DE1D N/A synthetic
    construct
    32630    		 21742266 Assembly1
    protein:B:364~453 5~6,15,18~22
    635 2lup:A

    		 32 N/A URS000080DFC5 N/A synthetic
    construct
    32630    		 21742266
    15150409    		 Assembly1
    protein:B:364~453 5,17~18,20~21,30
    636 2mf0:G

    		 72 GO:0006109 (P) regulation of carbohydr...
    GO:0006401 (P) RNA catabolic process    		 URS000080DEDE RF00166 Pseudomonas
    fluorescens
    294    		 24828038 Assembly1
    protein:A:1~59 23,25,27~31,45,48~50,53
    protein:B:1~59 21~23,26~28,30~32,45~53
    protein:C:1~59 3~4,6,8~12,59~61,63~65,67~69
    protein:D:1~59 2~4,6~9,12,60~61,63~68
    protein:E:1~59 38~40,42~43
    protein:F:1~59 38~42
    637 2mf1:G

    		 72 GO:0006109 (P) regulation of carbohydr...
    GO:0006401 (P) RNA catabolic process    		 URS000080DEDE RF00166 Pseudomonas
    fluorescens
    294    		 24828038 Assembly1
    protein:A:1~59 18~20,25,27~31,44~46,48~50,52~
    54
    protein:B:1~59 21~23,26~32,46~53
    protein:C:1~59 3~4,6,8~12,59~61,63~65,67~69
    protein:D:1~59 2~9,12,60~61,63~68
    protein:E:1~59 38~40,42~43,57~58,72
    protein:F:1~59 38~43,72
    638 2mfc:B

    		 22 N/A URS000080E1AC N/A synthetic
    construct
    32630    		 24561806 Assembly1
    protein:A:1~59 3~4,6,9~12
    protein:C:1~59 2~4,6~9,12~13
    639 2mfc:D

    		 22 N/A URS000080E1AC N/A synthetic
    construct
    32630    		 24561806 Assembly1
    protein:A:1~59 2~4,6~9,11~12
    protein:C:1~59 3~4,6,8~12
    640 2mfe:B

    		 22 N/A URS000080E113 N/A synthetic
    construct
    32630    		 24561806 Assembly1
    protein:A:1~59 23,25,28~31
    protein:C:1~59 21~23,25~28,30~31
    641 2mfe:D

    		 22 N/A URS000080E113 N/A synthetic
    construct
    32630    		 24561806 Assembly1
    protein:A:1~59 20~23,25~28,30~32
    protein:C:1~59 22~23,25,27~31
    642 2mff:B

    		 21 N/A URS000080DD8A N/A synthetic
    construct
    32630    		 24561806 Assembly1
    protein:A:1~59 43,45,48~53
    protein:C:1~59 43~46,48~50,52,54
    643 2mff:D

    		 21 N/A URS000080DD8A N/A synthetic
    construct
    32630    		 24561806 Assembly1
    protein:A:1~59 44~46,48~50,52~54
    protein:C:1~59 46,48~53
    644 2mfg:B

    		 21 N/A URS000080E0C3 N/A synthetic
    construct
    32630    		 24561806 Assembly1
    protein:A:1~59 60~61,63~68
    protein:C:1~59 59,61,63~65,68
    645 2mfg:D

    		 21 N/A URS000080E0C3 N/A synthetic
    construct
    32630    		 24561806 Assembly1
    protein:A:1~59 59,64~65,68
    protein:C:1~59 60~61,63~68
    646 2mgz:C

    		 12 N/A URS000080E2FC N/A synthetic
    construct
    32630    		 25132178 Assembly1
    protein:A:96~189 1~8
    protein:B:19~123 7~12
    647 2mjh:B

    		 10 N/A URS000080E11A N/A synthetic
    construct
    32630    		 24838563 Assembly1
    protein:A:195~336 16~25
    648 2mkn:B

    		 19 N/A URS000080DE3E N/A synthetic
    construct
    32630    		 24521053 Assembly1
    protein:A:181~224 4~7,15
    649 2mkn:C

    		 19 N/A URS000080E320 N/A synthetic
    construct
    32630    		 24521053 Assembly1
    protein:A:181~224 23~28
    650 2mqv:B

    		 68 N/A URS000080DD93 N/A Murine
    leukemia
    virus
    11786    		 25209668 Assembly1
    protein:A:1~56 102~103,107~111,146~147
    651 2ms0:B

    		 71 GO:0030533 (F) triplet codon-amino aci... URS0000715533 RF00005 Murine
    leukemia
    virus
    11786    		 25209668 Assembly1
    protein:A:1~55 6~15,49,60,68
    protein:C:101~156 12,32,34~38
    652 2ms1:B

    		 71 GO:0030533 (F) triplet codon-amino aci... URS0000715533 RF00005 Murine
    leukemia
    virus
    11786    		 25209668 Assembly1
    protein:A:1~55 6~9,45
    653 2n3o:B

    		 23 N/A URS0000A7637D N/A synthetic
    construct
    32630    		 N/A Assembly1
    protein:A:41~163 9~14
    654 2n82:A

    		 23 N/A URS0000A7638D N/A synthetic
    construct
    32630    		 27001519 Assembly1
    protein:B:105~208 19,25~36,41
    655 2noq:A
    (7.3Å)
    		 190 GO:0043022 (F) ribosome binding URS000080E076 RF00458 Cricket
    paralysis
    virus
    12136    		 17115051 Assembly1
    protein:F:75~224 86~90
    protein:G:4~216 10~15,61
    656 2noq:E
    (7.3Å)
    		 53 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E06B RF02543 Saccharomyces
    cerevisiae
    4932    		 17115051 Assembly1
    protein:G:4~216 2153~2157,2169~2177,2183~2185
    657 2nqp:F
    (3.5Å)
    		 71 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00004EADCF RF00005 Escherichia
    coli
    562    		 17466622 Assembly1
    protein:C:7~270 16,19~20,56
    protein:D:8~270 16,22~25,40
    658 2nr0:E
    (3.9Å)
    		 81 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00004630EA RF00005 Escherichia
    coli
    562    		 17466622 Assembly1
    protein:A:7~270 16,23,25,31,39~40
    protein:B:7~270 19,56
    659 2nr0:F
    (3.9Å)
    		 72 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00004630EA RF00005 Escherichia
    coli
    562    		 17466622 Assembly1
    protein:A:7~270 19~20,56
    protein:B:7~270 16~17,23~25,33~34,36~41
    660 2nr0:G
    (3.9Å)
    		 67 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00004630EA RF00005 Escherichia
    coli
    562    		 17466622 Assembly2
    protein:C:7~270 16~17,23~25,30,32,35~36,39~42
    protein:D:7~270 16,19~20,56
    661 2nr0:H
    (3.9Å)
    		 65 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00004630EA RF00005 Escherichia
    coli
    562    		 17466622 Assembly2
    protein:C:7~270 16,19~20,56
    protein:D:7~270 16,23~25,31,39~40
    662 2nre:F
    (4.0Å)
    		 56 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00004630EA RF00005 Escherichia
    coli
    562    		 17466622 Assembly1
    protein:A:7~270 16,23,25
    663 2nue:C
    (2.9Å)
    		 46 N/A URS000080E013 N/A synthetic
    construct
    32630    		 18047582 Assembly1
    protein:A:2~221 6~8,17~18,31~34,42~44
    protein:B:1~220 29~30
    664 2nuf:C
    (2.5Å)
    		 28 N/A URS000080DD89 N/A synthetic
    construct
    32630    		 18047582 Assembly1
    protein:A:2~220 7~8,11,18~24
    protein:B:2~220 1~6,24~26
    665 2nuf:D
    (2.5Å)
    		 28 N/A URS000080DD89 N/A synthetic
    construct
    32630    		 18047582 Assembly1
    protein:A:2~220 1~6,23~26
    protein:B:2~220 7~8,11,18~23
    666 2nug:C
    (1.7Å)
    		 11 N/A URS000080DF34 N/A synthetic
    construct
    32630    		 18047582 Assembly1
    protein:A:3~218 2~7
    protein:B:3~220 7~12
    667 2nug:D
    (1.7Å)
    		 11 N/A URS000080DF34 N/A synthetic
    construct
    32630    		 18047582 Assembly1
    protein:A:3~218 8~12
    protein:B:3~220 2~7
    668 2nug:E
    (1.7Å)
    		 11 N/A URS000080DDD6 N/A synthetic
    construct
    32630    		 18047582 Assembly1
    protein:A:3~218 17,23~25
    protein:B:3~220 17~22
    669 2nug:F
    (1.7Å)
    		 11 N/A URS000080DDD6 N/A synthetic
    construct
    32630    		 18047582 Assembly1
    protein:A:3~218 17~21
    protein:B:3~220 17,23~25
    670 2nvq:R
    (2.9Å)
    		 10 N/A URS000080E03D N/A synthetic
    construct
    32630    		 17129781 Assembly1
    protein:A:3~1445 1,10
    protein:B:20~1224 5,9~10
    671 2nvt:R
    (3.36Å)
    		 10 N/A URS000080DEA1 N/A synthetic
    construct
    32630    		 17129781 Assembly1
    protein:A:3~1451 1,10
    protein:B:20~1224 1~2,6,9~10
    672 2nvx:R
    (3.6Å)
    		 10 N/A URS000080E03D N/A synthetic
    construct
    32630    		 17129781 Assembly1
    protein:A:3~1445 1,3,10
    protein:B:20~1222 2,6~10
    673 2nvz:R
    (4.3Å)
    		 10 N/A URS000080E03D N/A synthetic
    construct
    32630    		 17129781 Assembly1
    protein:A:2~1445 1,10
    protein:B:20~1223 2,8~10
    674 2nz4:P
    (2.498Å)
    		 141 GO:0003824 (F) catalytic activity
    GO:0010468 (P) regulation of gene expr...    		 URS000080E011 RF00234 Bacillus
    anthracis
    1392    		 17196404 Assembly1
    protein:A:7~96 14,16,17B,17C,17D,17E,17F,17G,
    17H,17K,17L
    675 2nz4:Q
    (2.498Å)
    		 141 GO:0003824 (F) catalytic activity
    GO:0010468 (P) regulation of gene expr...    		 URS000080E011 RF00234 Bacillus
    anthracis
    1392    		 17196404 Assembly2
    protein:B:5~98 13,17B,17C,17D,17E,17F,17G,17H
    ,17K,17L
    676 2nz4:R
    (2.498Å)
    		 141 GO:0003824 (F) catalytic activity
    GO:0010468 (P) regulation of gene expr...    		 URS000080E011 RF00234 Bacillus
    anthracis
    1392    		 17196404 Assembly3
    protein:C:8~97 12,14,17B,17C,17D,17E,17F,17G,
    17H,17K,17L
    677 2nz4:S
    (2.498Å)
    		 141 GO:0003824 (F) catalytic activity
    GO:0010468 (P) regulation of gene expr...    		 URS000080E011 RF00234 Bacillus
    anthracis
    1392    		 17196404 Assembly4
    protein:D:7~96 14,17B,17C,17D,17E,17F,17G,17H
    ,17K,17L
    678 2o5i:H
    (2.5Å)
    		 16 N/A URS000080DE62 N/A synthetic
    construct
    32630    		 17581590 Assembly1
    protein:C:1~1119 1,5~7,12~16
    protein:D:2~1505 2,4,10,16
    679 2o5i:Y
    (2.5Å)
    		 16 N/A URS000080DE62 N/A synthetic
    construct
    32630    		 17581590 Assembly2
    protein:M:1~1119 1,5~7,13~15
    protein:N:2~1505 2,4,9~10,16
    680 2o5j:H
    (3.0Å)
    		 16 N/A URS000080DE62 N/A synthetic
    construct
    32630    		 17581591 Assembly1
    protein:C:1~1119 1~2,5,11~14
    protein:D:2~1505 2,6~7,9~10,16
    681 2o5j:Y
    (3.0Å)
    		 16 N/A URS000080DE62 N/A synthetic
    construct
    32630    		 17581591 Assembly2
    protein:M:1~1119 1,4~8,11~14
    protein:N:2~1505 2,4,6~7,10,15~16
    682 2ogm:0
    (3.5Å)
    		 2766 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DEF1 RF02540
    RF02541    		 Deinococcus
    radiodurans
    1299    		 17360517 Assembly1
    protein:B:1~205 1672,2035~2036,2485,2490,2551,
    2553~2554,2557,2615,2659,2766,
    2796~2797
    683 2ogn:0
    (3.56Å)
    		 2766 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DEF1 RF02540
    RF02541    		 Deinococcus
    radiodurans
    1299    		 17360517 Assembly1
    protein:B:1~205 1672,2035~2036,2490~2491,2554,
    2557,2599,2659,2661,2766,2796~
    2797
    684 2ogo:0
    (3.66Å)
    		 2765 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DEF1 RF02540
    RF02541    		 Deinococcus
    radiodurans
    1299    		 17360517 Assembly1
    protein:B:1~205 2036,2557,2615,2659,2766,2796~
    2797
    685 2oih:B
    (2.4Å)
    		 73 EC:3.1.-.-
    GO:0004540 (F) RNA nuclease activity    		 URS000080E101 RF00094 synthetic
    construct
    32630    		 17355864 Assembly1
    protein:A:4~98 144,148~154,157~158
    686 2oj3:B
    (2.9Å)
    		 73 EC:3.1.-.-
    GO:0004540 (F) RNA nuclease activity    		 URS000080E101 RF00094 synthetic
    construct
    32630    		 17355864 Assembly1
    protein:A:4~98 144,148~154,157~158
    687 2om7:B
    (7.3Å)
    		 10 N/A URS000080DEFC N/A Thermus
    thermophilus
    274    		 17349960 Assembly1
    protein:L:6~688 368,394
    688 2om7:C
    (7.3Å)
    		 96 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DE2E RF00177 Thermus
    thermophilus
    274    		 17349960 Assembly1
    protein:E:5~128 1490,1492
    protein:L:6~688 1493~1494
    689 2om7:D
    (7.3Å)
    		 13 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E0A6 RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    274    		 17349960 Assembly1
    protein:L:6~688 55,358~359
    690 2om7:F
    (7.3Å)
    		 29 N/A URS000080E251 N/A Thermus
    thermophilus
    274    		 17349960 Assembly1
    protein:L:6~688 2656,2659~2662
    691 2om7:I
    (7.3Å)
    		 58 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DEBD RF02540
    RF02541    		 Thermus
    thermophilus
    274    		 17349960 Assembly1
    protein:L:6~688 1067,1095
    692 2om7:J
    (7.3Å)
    		 73 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E21E RF02541
    RF02540    		 Thermus
    thermophilus
    274    		 17349960 Assembly1
    protein:K:18~223 2123~2124,2128,2175~2178
    693 2om7:M
    (7.3Å)
    		 74 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080E2DD RF00005 Thermus
    thermophilus
    274    		 17349960 Assembly1
    protein:K:18~223 54,63~64
    694 2otj:0
    (2.9Å)
    		 2754 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DFCD RF02540
    RF00002    		 Haloarcula
    marismortui
    2238    		 17321546 Assembly1
    protein:A:1~237 781~784,820,857,866~867,870~87
    5,877,886,1652~1654,1844~1848,
    1850~1853,1855~1856,1860~1863,
    1868~1884,1898~1900,1939~1944,
    2114,2116,2123,2125,2248~2250,
    2270,2272~2273,2625,2630,2632~
    2634
    protein:B:1~337 835~836,1234,1732~1736,1751,17
    53~1754,2034~2036,2038~2039,20
    65~2066,2090~2094,2545~2549,25
    80~2583,2606~2607,2609~2610,26
    13~2616,2653~2658,2669~2674,26
    78~2679,2681~2682,2713~2719,27
    56~2757,2759~2760,2765~2768,28
    06~2810,2817~2822,2828,2837~28
    40,2842~2843,2846~2848,2851~28
    53,2861~2862,2897~2898
    protein:C:1~246 34~35,326~330,338~339,347,447~
    452,454~455,457~459,474~477,64
    1~643,645~647,656~658,663~664,
    670~672,674~678,749~751,762,76
    4~766,890,894,1305~1311,1342~1
    344,1348,1351~1352,1358~1363,2
    100~2101
    protein:D:10~174 2333,2336~2338,2345~2351
    protein:E:1~172 1140,2560~2561,2565~2567,2690,
    2694~2695,2703~2705,2778~2784,
    2792~2793,2796
    protein:F:1~119 243~246,261~264
    protein:G:12~73 1150~1151,1210~1211
    protein:H:1~171 964~969,1002~1008,1053~1056,11
    34~1135,2282~2283,2309~2311,24
    94~2495,2501~2504,2518~2522,25
    31
    protein:J:4~145 533,615,1102~1104,1109,1117~11
    19,1235~1236,1241~1244,1247,20
    65~2066,2081~2082,2676,2793,28
    03,2814~2815
    protein:K:1~132 1742~1745,1747,1992~1994,2036~
    2037,2546,2582~2583,2596~2598,
    2601,2686~2687,2708~2709,2711~
    2712,2721,2762~2764
    protein:L:1~150 165~166,196,215~216,220~223,41
    7,623~625,644~645,688,692~694,
    697~701,745,754~755,757~759,76
    2,897~905,918~920,924~927,1042
    ,1294~1300,1302,1353~1354,2430
    ~2432,2441~2444,2452~2454,2465
    ~2467
    protein:M:1~194 133~136,145,154~161,170~172,17
    5,181~183,188~191,193~195,206,
    227,241~244,251,259,261,263~26
    6,378~381,388~394,398~404,417,
    431~433,770~771,870,1467,1469~
    1472,1864,2121~2123,2131~2132,
    2244~2245,2263~2264,2266,2273~
    2275
    protein:N:1~186 962,1010,2353,2368~2369,2413~2
    417
    protein:O:1~115 654~657,659~660,700~701,708~71
    1,719,721~722,745~746,935~936,
    1276~1278
    protein:P:1~143 792~793,800~802,815~817,1387~1
    388,1396~1399,1500~1502,1540~1
    541,1548~1549,1565~1566,1593~1
    598,1704~1708,1715~1720,1760~1
    762,1784~1790,1793~1795,1798,1
    800~1802,1813,1817,2735~2739
    protein:Q:1~95 948~953,1018~1020,2295~2300,23
    04~2307,2353~2354,2363~2367,23
    70,2386~2390,2392~2395,2403~24
    04,2423~2424
    protein:R:1~150 11~12,19~22,492,499~501,510,52
    3~526,840~841,844,1369~1373,14
    28,1431,1689~1690,2048~2055,20
    87~2088,2658~2660,2832,2841~28
    43
    protein:S:1~81 67~68,1418,1444~1448,1501,1507
    ~1508,1673~1676
    protein:T:1~119 30~32,79~82,87,97,99~101,303,3
    06~309,315~318,332~336,342~344
    ,446~448,483~484,486~489
    protein:U:4~56 1810,2721,2755,2864~2866,2890
    protein:V:1~65 55,57,68~69,71~74,90~91,93,96
    protein:W:1~154 567~568,588,943~946,1024~1025,
    1067~1068,1084,1086~1087,1095~
    1099,1262~1264,1285~1288
    protein:X:7~88 1380~1386,1399~1401,1729~1731,
    2043~2044,2726~2727,2744,2834~
    2835,2855~2857,2895~2896,2904~
    2905
    protein:Y:95~236 320,521,537~541,551~554,556,59
    4~595,617~618,620~623,628~629,
    637~638,905~908,1071~1075,1089
    ~1090,1266~1269,1293,1311~1313
    ,1315~1318,1325~1331,1333~1335
    ,1343~1344,1356
    protein:Z:10~82 796~797,818~821,1601~1602,1604
    ,1651~1652,1654,1771~1773,1829
    ,1885~1887
    protein:1:1~56 51,111~113,119~121,148~149,178
    ~179,470~473,772~779,845,863~8
    64,881~882,890~892,894,1414~14
    15,1473,1687~1688,1694~1695,18
    36~1837
    protein:2:1~49 53~54,58~61,86~88,120~123,462,
    466,514,1414~1415,1417~1419,14
    39,1486,1675~1677,1684~1685,16
    91
    protein:3:1~92 169~170,218~220,389~390,395~39
    6,735,1922~1923,1925,2120~2121
    ,2317~2321,2378~2379,2381~2382
    ,2407~2409,2427~2428,2432~2438
    ,2450~2452,2457~2462,2468
    protein:I:71~140 1162~1164,1167~1168,1180~1181,
    1184~1186,1192
    695 2otj:9
    (2.9Å)
    		 122 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00003592C7 RF00001 Haloarcula
    marismortui
    2238    		 17321546 Assembly1
    protein:D:10~174 3029~3030,3040~3042,3044~3046,
    3053~3054,3056~3059
    protein:H:1~171 3092~3093
    protein:N:1~186 3004~3008,3010~3011,3013~3014,
    3026~3028,3034~3037,3046~3052,
    3068~3069,3114,3117~3120
    protein:Q:1~95 3008~3009,3011~3012
    protein:W:1~154 3084~3088,3097~3099
    696 2otl:0
    (2.7Å)
    		 2754 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DFCD RF02540
    RF00002    		 Haloarcula
    marismortui
    2238    		 17321546 Assembly1
    protein:A:1~237 781~784,820,857,866~867,870~87
    5,877,886,1460,1652~1654,1844~
    1848,1851~1856,1860~1863,1868~
    1884,1898~1900,1939~1944,2114,
    2116,2123,2125,2248~2250,2270~
    2273,2630,2632~2634
    protein:B:1~337 835~836,1234,1732~1736,1751,17
    53~1754,2034~2036,2038~2039,20
    65~2066,2090~2094,2545~2549,25
    80~2582,2606~2607,2609~2610,26
    13~2616,2653~2658,2669~2674,26
    78~2679,2681~2682,2713~2719,27
    56~2757,2759~2760,2765~2768,28
    06~2810,2818~2822,2837~2840,28
    42~2843,2846~2848,2851~2853,28
    61~2862,2897~2899
    protein:C:1~246 34~35,326~330,333,338~339,447~
    452,454~455,457~459,474~477,64
    1~642,645~647,656~657,663~664,
    671~672,674~678,749~751,762,76
    4~766,890,894,1305~1311,1342~1
    344,1351~1352,1358~1363,2100~2
    101
    protein:D:10~174 2333,2336~2338,2345~2351
    protein:E:1~172 1140,2561,2565~2567,2690,2694~
    2695,2703~2705,2778~2784,2792~
    2793,2796
    protein:F:1~119 243~246,261~264
    protein:G:12~73 1150~1151,1210~1211
    protein:H:1~171 964~967,1002~1008,1053~1056,11
    34~1135,2282~2283,2309~2311,24
    94~2495,2501~2504,2518~2522,25
    31
    protein:J:4~145 533,615,1102~1104,1109,1117~11
    19,1235~1236,1241~1244,1247,20
    65~2066,2081~2083,2676~2677,27
    93,2803,2814~2815
    protein:K:1~132 1742~1745,1747,1992~1994,2036~
    2037,2546,2582~2583,2596~2598,
    2686~2687,2708~2709,2711~2713,
    2720~2721,2762~2764
    protein:L:1~150 164~166,196~197,215~216,220~22
    3,417,623~625,644~645,688,692~
    694,697~700,745,754~755,757~75
    9,762,897~905,918~920,924~927,
    1041~1042,1294~1300,1302,1353~
    1354,2430~2432,2441~2444,2452~
    2454,2465~2467
    protein:M:1~194 133~136,145,154~158,160~161,17
    0~172,175,181~183,188~192,194~
    195,206,227,241~244,251,261,26
    3~266,378~381,388~394,398~404,
    417,431~433,770~771,869,1467,1
    469~1472,1864,2121~2123,2131~2
    132,2244~2246,2263~2264,2266,2
    273~2275
    protein:N:1~186 962,1010,2353,2368~2369,2413~2
    417
    protein:O:1~115 654~657,659~660,700~701,708~71
    1,719,721~722,745~746,936,1276
    ~1278
    protein:P:1~143 792~793,800~802,815~817,1387~1
    388,1396~1399,1500~1502,1540,1
    548~1549,1565~1566,1593~1598,1
    704~1708,1715~1720,1760~1762,1
    784~1790,1793~1795,1798,1800~1
    802,1813,1817,2735~2739
    protein:Q:1~95 949~953,1018~1019,2295~2300,23
    04~2307,2353,2363~2367,2370,23
    86~2390,2392~2395,2403~2404,24
    23~2424
    protein:R:1~150 11~12,19~22,492,499~501,510,52
    3~526,840~841,843~844,1369~137
    3,1428,1689~1690,2048~2055,208
    7~2088,2658~2660,2831~2832,284
    1~2843
    protein:S:1~81 67~68,1418,1444~1448,1501,1507
    ~1508,1673~1676
    protein:T:1~119 30~32,79~82,97,99~101,303,306~
    309,315~318,332~336,342~344,44
    7~448,483~484,486~489
    protein:U:4~56 1810,2720~2721,2755,2864~2866,
    2890
    protein:V:1~65 55~57,68~69,71~74,93~94,96
    protein:W:1~154 567~568,588,943~946,1024~1025,
    1066~1068,1084,1086~1087,1095~
    1099,1262~1264,1285~1288
    protein:X:7~88 1380~1385,1399~1401,1729~1731,
    2043~2044,2726~2727,2744,2834~
    2835,2855~2857,2895~2896,2904~
    2905
    protein:Y:95~236 320,521,537~541,551~554,556,59
    4~595,617~618,620~623,628~629,
    637~638,905~908,1071~1074,1089
    ~1090,1266~1269,1293,1311~1313
    ,1315~1318,1324~1331,1333~1335
    ,1343,1356
    protein:Z:10~82 796~797,818,820,1601~1602,1604
    ,1651~1652,1654,1771,1773,1829
    ~1830,1885~1887
    protein:1:1~56 51,111~113,119~121,148~149,178
    ~179,470~473,772~779,845,864,8
    81~882,890~892,894,1414~1415,1
    473,1687~1688,1694~1695,1836~1
    837
    protein:2:1~49 53~54,58~61,86~88,120~123,462,
    466,1414~1415,1417~1419,1439,1
    486,1675~1677,1684~1685,1691
    protein:3:1~92 169~170,218~220,389~390,395~39
    6,735,1922~1925,2120~2121,2317
    ~2320,2378~2382,2407~2409,2427
    ~2428,2432~2438,2451~2452,2457
    ~2462,2468
    protein:I:71~140 1162~1164,1167~1168,1180~1181,
    1183~1187,1192
    697 2otl:9
    (2.7Å)
    		 122 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00003592C7 RF00001 Haloarcula
    marismortui
    2238    		 17321546 Assembly1
    protein:D:10~174 3017,3029~3030,3040~3042,3044~
    3046,3053,3056~3059
    protein:N:1~186 3004~3008,3010~3011,3013~3014,
    3026~3028,3034~3037,3046~3052,
    3068~3069,3114,3117~3119
    protein:Q:1~95 3008~3009,3011~3012,3069
    protein:W:1~154 3084~3088,3097~3099
    698 2ozb:C
    (2.6Å)
    		 33 N/A URS000080DDB4 N/A synthetic
    construct
    32630    		 17412961 Assembly1
    protein:A:3~128 29~32,42~43
    protein:B:85~333 31~32,34~35,39~41
    699 2ozb:F
    (2.6Å)
    		 33 N/A URS000080DDB4 N/A synthetic
    construct
    32630    		 17412961 Assembly2
    protein:D:4~128 29~32,42~43
    protein:E:85 31~32,34~35,39~41
    700 2pjp:B
    (2.3Å)
    		 23 N/A URS000080DE74 N/A synthetic
    construct
    32630    		 17537456
    17565186    		 Assembly1
    protein:A:487~607 17~24
    << < 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 > >>
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    Reference:
  • Chengxin Zhang, Lydia Freddolino (2024) "FURNA: a database for function annotations of RNA structures," PLOS Biology 22(7): e3002476.