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FURNA
Download all results in tab-seperated text for 14210 RNAs.
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  • Hover over Ligand to view the name of the ligand and the ligand-binding nucleotides on the RNA.

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    # PDB
    (Resolution)    		 Length EC number
    & GO term     		RNAcentral Rfam Taxon PubMed ATtRACT
    motif     		Ligand &
    binding nucleotides
    9901 7pju:A
    (9.5Å)
    		 2903 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00021ED929 RF02540
    RF02541    		 Escherichia
    coli
    K-12
    83333    		 34635670 Assembly1
    rna:B:1~120 861~864,915~918,958~959,2339
    rna:a:1~1540 1701,1703,1846,1912~1913,1915,
    1920~1921,1947~1949,1959~1962
    rna:v:1~76 1850~1851,1891~1893,2112,2168,
    2394~2395,2421~2422,2432
    rna:w:1~76 1913,2251~2253,2309,2451,2585,
    2602
    9902 7pju:B
    (9.5Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000049E57 RF00001 Escherichia
    coli
    K-12
    83333    		 34635670 Assembly1
    rna:A:1~2903 41,78~80,89,96~97,99~100
    9903 7pju:a
    (9.5Å)
    		 1540 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00000ABFE9 RF00177
    RF01959
    RF01960    		 Escherichia
    coli
    K-12
    83333    		 34635670 Assembly1
    rna:A:1~2903 702,1407~1409,1418~1421,1429,1
    482~1485,1493~1496,1517
    rna:v:1~76 790,966,1229~1230,1338~1340,14
    00
    rna:w:1~76 530~531,1054,1493
    rna:z:-2~8 530,693,926,1054,1196,1400~140
    3,1492~1493,1498,1505
    9904 7pju:v
    (9.5Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00001BBAFC RF00005 Escherichia
    coli
    K-12
    83333    		 34635670 Assembly1
    rna:A:1~2903 3,19,56,70~72,75~76
    rna:a:1~1540 29~32,34,38~42
    rna:z:-2~8 34~37
    9905 7pju:w
    (9.5Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00021ED99D RF00005 Escherichia
    coli
    K-12
    83333    		 34635670 Assembly1
    rna:A:1~2903 38~39,56,74~76
    rna:a:1~1540 34~37
    rna:z:-2~8 34,36~38
    9906 7pju:z
    (9.5Å)
    		 11 N/A N/A N/A Escherichia
    coli
    K-12
    83333    		 34635670 Assembly1
    rna:a:1~1540 -2,0~5,7~8
    rna:v:1~76 0~3
    rna:w:1~76 4~5,7
    9907 7pjv:A
    (3.1Å)
    		 2903 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00021ED929 RF02540
    RF02541    		 Escherichia
    coli
    K-12
    83333    		 34635670 Assembly1
    rna:B:1~120 861~864,915~919,958,2339
    rna:a:1~1540 1689,1700~1701,1703,1846~1847,
    1912~1913,1919~1920,1947~1949,
    1959~1961
    rna:v:1~76 1850~1852,1891~1893,2112,2168,
    2394,2421~2422,2432
    rna:w:1~76 896,1913,2063,2251~2253,2450~2
    451,2585,2602
    9908 7pjv:B
    (3.1Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000049E57 RF00001 Escherichia
    coli
    K-12
    83333    		 34635670 Assembly1
    rna:A:1~2903 41,78~81,89,96~97,99~100
    9909 7pjv:a
    (3.1Å)
    		 1540 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00000ABFE9 RF00177
    RF01959
    RF01960    		 Escherichia
    coli
    K-12
    83333    		 34635670 Assembly1
    rna:A:1~2903 702,1407~1409,1418~1420,1428~1
    429,1474~1475,1483~1484,1494~1
    496,1517
    rna:v:1~76 790,966,1229~1230,1338~1340,14
    00
    rna:w:1~76 530~531,1054,1493
    rna:z:-2~8 518,530,693,788~789,926,1054,1
    196,1400~1402,1492~1493,1498,1
    505
    9910 7pjv:v
    (3.1Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00001BBAFC RF00005 Escherichia
    coli
    K-12
    83333    		 34635670 Assembly1
    rna:A:1~2903 2~3,19,56,70~72,75~76
    rna:a:1~1540 29~32,34,38,40~42
    rna:z:-2~8 34~37
    9911 7pjv:w
    (3.1Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00021ED99D RF00005 Escherichia
    coli
    K-12
    83333    		 34635670 Assembly1
    rna:A:1~2903 37~38,56,73~76
    rna:a:1~1540 34~37
    rna:z:-2~8 34~37
    9912 7pjv:z
    (3.1Å)
    		 11 N/A N/A N/A Escherichia
    coli
    K-12
    83333    		 34635670 Assembly1
    rna:a:1~1540 -2,0~8
    rna:v:1~76 0~3
    rna:w:1~76 4~7
    9913 7pjw:A
    (4.0Å)
    		 2903 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00021ED929 RF02540
    RF02541    		 Escherichia
    coli
    562    		 34635670 Assembly1
    rna:B:1~120 861~864,915~918,958
    rna:a:1~1540 1689,1701,1846,1912~1913,1915~
    1916,1919~1920,1947~1948,1959~
    1961
    rna:v:1~76 1850~1851,1891~1893,2112,2168,
    2394~2395,2421~2422,2432
    rna:w:1~76 878,1913,2063,2251~2253,2309,2
    450~2451,2602
    9914 7pjw:B
    (4.0Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000049E57 RF00001 Escherichia
    coli
    562    		 34635670 Assembly1
    rna:A:1~2903 78~81,89,96~97,99~101
    9915 7pjw:a
    (4.0Å)
    		 1540 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00000ABFE9 RF00177
    RF01959
    RF01960    		 Escherichia
    coli
    562    		 34635670 Assembly1
    rna:A:1~2903 702,1407~1409,1418~1419,1474~1
    475,1482~1484,1494~1496,1517
    rna:v:1~76 790,966,1229,1338~1340
    rna:w:1~76 530,1054,1493
    rna:z:-2~8 530,693,926,1054,1196,1400,140
    2~1403,1492~1493,1498
    9916 7pjw:v
    (4.0Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00001BBAFC RF00005 Escherichia
    coli
    562    		 34635670 Assembly1
    rna:A:1~2903 3,19,56,70~71,75~76
    rna:a:1~1540 30~31,34,38~40,42
    rna:z:-2~8 34~37
    9917 7pjw:w
    (4.0Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00021ED99D RF00005 Escherichia
    coli
    562    		 34635670 Assembly1
    rna:A:1~2903 19,37~38,56,74~76
    rna:a:1~1540 34~37
    rna:z:-2~8 34~37
    9918 7pjw:z
    (4.0Å)
    		 11 N/A N/A N/A Escherichia
    coli
    562    		 34635670 Assembly1
    rna:a:1~1540 -2,1~8
    rna:v:1~76 0~3
    rna:w:1~76 4~7
    9919 7pjx:A
    (6.5Å)
    		 2903 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00021ED929 RF02540
    RF02541    		 Escherichia
    coli
    562    		 34635670 Assembly1
    rna:B:1~120 861~864,915~919,958,2339
    rna:a:1~1540 1703,1846~1847,1912~1913,1919~
    1920,1947~1950,1959~1962
    rna:v:1~76 1850~1852,1891~1893,2112,2168,
    2394,2421~2422,2432
    rna:w:1~76 1913~1915,2063~2064,2251~2253,
    2482,2585,2602
    9920 7pjx:B
    (6.5Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000049E57 RF00001 Escherichia
    coli
    562    		 34635670 Assembly1
    rna:A:1~2903 41,78~81,89,96~97,99~100
    9921 7pjx:a
    (6.5Å)
    		 1540 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00000ABFE9 RF00177
    RF01959
    RF01960    		 Escherichia
    coli
    562    		 34635670 Assembly1
    rna:A:1~2903 702,1407~1409,1418~1421,1429,1
    482~1485,1494~1496,1517
    rna:v:1~76 790,966,1229~1230,1338~1340,14
    00
    rna:w:1~76 530~531,1054,1493
    rna:z:-2~8 518,530,693,788~789,926,1054,1
    196,1400~1402,1492~1493,1498,1
    505
    9922 7pjx:v
    (6.5Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00001BBAFC RF00005 Escherichia
    coli
    562    		 34635670 Assembly1
    rna:A:1~2903 2~3,19,56,70~72,75~76
    rna:a:1~1540 29~32,34,38,40~42
    rna:z:-2~8 34~37
    9923 7pjx:w
    (6.5Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00021ED99D RF00005 Escherichia
    coli
    562    		 34635670 Assembly1
    rna:A:1~2903 25~26,37~38,52,73~76
    rna:a:1~1540 34~37
    rna:z:-2~8 34~37
    9924 7pjx:z
    (6.5Å)
    		 11 N/A N/A N/A Escherichia
    coli
    562    		 34635670 Assembly1
    rna:a:1~1540 -2,0~8
    rna:v:1~76 0~3
    rna:w:1~76 4~7
    9925 7pjy:A
    (3.1Å)
    		 2903 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00021ED929 RF02540
    RF02541    		 Escherichia
    coli
    K-12
    83333    		 34635670 Assembly1
    rna:B:1~120 861~864,915,917~918,958~959,23
    39~2340
    rna:a:1~1540 1700~1701,1703,1837,1846,1848,
    1912~1916,1919~1920,1947~1948,
    1959~1961
    rna:v:1~76 1850~1851,1891~1893,2112~2113,
    2168~2169,2394~2395,2421~2422,
    2432
    rna:w:1~76 1909,2063,2251~2253,2255,2450~
    2451,2602
    9926 7pjy:B
    (3.1Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000049E57 RF00001 Escherichia
    coli
    K-12
    83333    		 34635670 Assembly1
    rna:A:1~2903 41,78~80,89~90,96~97,99~100
    9927 7pjy:a
    (3.1Å)
    		 1540 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00000ABFE9 RF00177
    RF01959
    RF01960    		 Escherichia
    coli
    K-12
    83333    		 34635670 Assembly1
    rna:A:1~2903 702,784,899,1407~1409,1418,142
    8~1429,1474~1475,1483~1484,149
    3~1496,1517
    rna:v:1~76 693,966,1229~1230,1338~1341
    rna:w:1~76 965,1054
    rna:z:0~9 693,926,1054,1196,1397,1505
    9928 7pjy:v
    (3.1Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00001BBAFC RF00005 Escherichia
    coli
    K-12
    83333    		 34635670 Assembly1
    rna:A:1~2903 2~4,19~20,56,70~71,75~76
    rna:a:1~1540 29~32,34,38,41~42
    rna:z:0~9 34~37
    9929 7pjy:w
    (3.1Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00021ED99D RF00005 Escherichia
    coli
    K-12
    83333    		 34635670 Assembly1
    rna:A:1~2903 2,12,74~76
    rna:a:1~1540 32,34
    rna:z:0~9 34~37
    9930 7pjy:z
    (3.1Å)
    		 10 N/A N/A N/A Escherichia
    coli
    K-12
    83333    		 34635670 Assembly1
    rna:a:1~1540 0,2~3,7~9
    rna:v:1~76 0~3
    rna:w:1~76 4~7
    9931 7pjz:A
    (6.0Å)
    		 2903 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00021ED929 RF02540
    RF02541    		 Escherichia
    coli
    562    		 34635670 Assembly1
    rna:B:1~120 861~862,915~919,958~959,2340
    rna:a:1~1540 1846~1848,1912~1916,1919~1920,
    1947~1948,1959
    rna:v:1~76 1850~1852,1891~1893,2112~2113,
    2168,2394~2395,2421~2422,2432
    rna:w:1~76 2063~2064,2251~2253,2450~2451,
    2602
    9932 7pjz:B
    (6.0Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000049E57 RF00001 Escherichia
    coli
    562    		 34635670 Assembly1
    rna:A:1~2903 41,78~81,89~90,97,99~100
    9933 7pjz:a
    (6.0Å)
    		 1540 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00000ABFE9 RF00177
    RF01959
    RF01960    		 Escherichia
    coli
    562    		 34635670 Assembly1
    rna:A:1~2903 702,1407~1410,1418,1483,1494~1
    495,1517
    rna:v:1~76 966,1338~1340
    rna:z:0~9 693,1054,1196,1397,1402,1505
    9934 7pjz:v
    (6.0Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00001BBAFC RF00005 Escherichia
    coli
    562    		 34635670 Assembly1
    rna:A:1~2903 2~4,19,56,70~72,75~76
    rna:a:1~1540 30~32,34,41
    rna:z:0~9 34~37
    9935 7pjz:w
    (6.0Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00021ED99D RF00005 Escherichia
    coli
    562    		 34635670 Assembly1
    rna:A:1~2903 74~76
    rna:z:0~9 34~37
    9936 7pjz:z
    (6.0Å)
    		 10 N/A N/A N/A Escherichia
    coli
    562    		 34635670 Assembly1
    rna:a:1~1540 0,2,5,7~9
    rna:v:1~76 0~3
    rna:w:1~76 4~7
    9937 7pkq:1
    (4.2Å)
    		 93 N/A URS0002681422 N/A Chlamydomonas
    reinhardtii
    3055    		 N/A Assembly1
    rna:2:5~217 5,26,30~31,38~46,48~61,63~65,7
    6,78,80~88,91~98
    rna:3:1~406 7~11,13~22,24~29,31~36
    9938 7pkq:2
    (4.2Å)
    		 213 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0002681423 RF00177 Chlamydomonas
    reinhardtii
    3055    		 N/A Assembly1
    rna:1:1~99 37~45,97~99,106,108,116~117,11
    9~124,133,135~136,138~139,160~
    169,171~174,176,186~188,193,19
    6~198,204~212
    rna:4:5~444 95~96,127~129,142~144
    rna:3:1~406 49,106,109~112,213~217
    9939 7pkq:3
    (4.2Å)
    		 393 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0002681420 RF00177
    RF01959
    RF02542
    RF01960    		 Chlamydomonas
    reinhardtii
    3055    		 N/A Assembly1
    rna:1:1~99 13,19,36,38,59~70,73,85,300,32
    7~328,330~335
    rna:4:5~444 219~220,233,243,245~247,265~26
    9,271,302~303,306,315,323~324,
    335~350,352~370,373~378,382,38
    5,389~393,396~406
    rna:2:5~217 1~5,67~69,77~78,307~308,320
    9940 7pkq:4
    (4.2Å)
    		 415 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0002681427 RF00177
    RF02542
    RF01960
    RF01959    		 Chlamydomonas
    reinhardtii
    3055    		 N/A Assembly1
    rna:2:5~217 344~346,380~381,389
    rna:3:1~406 8,21,86~87,89,99,101,103~114,1
    16~124,171,227,229~230,233,244
    ,248~256,268~269,271,273~274,2
    76~278,287,290,293~304,306~307
    ,309~310,324~326,400~401,409,4
    14,416~417,421~424,427~428,433
    ~435,437~438,440
    9941 7pkt:0
    (3.0Å)
    		 75 N/A URS00023359BF N/A Chlamydomonas
    reinhardtii
    3055    		 34887394 Assembly1
    rna:4:1~118 66~68,81,83~84
    9942 7pkt:1
    (3.0Å)
    		 162 N/A URS00023359C6 N/A Chlamydomonas
    reinhardtii
    3055    		 34887394 Assembly1
    rna:2:3~88 18,50~51,129
    rna:3:1~184 35~39
    rna:6:2~137 13,20,51~52,75~77,106,113,127~
    128
    9943 7pkt:2
    (3.0Å)
    		 86 N/A URS00023359B5 N/A Chlamydomonas
    reinhardtii
    3055    		 34887394 Assembly1
    rna:1:3~181 37~40
    rna:3:1~184 23,26,43~56
    rna:4:1~118 25~27,52
    rna:6:2~137 21,34~43
    rna:7:2~673 3~4,19~20,25,27~32,35~36
    rna:8:58~493 27,32~34
    9944 7pkt:3
    (3.0Å)
    		 184 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00023359B9 RF02541
    RF02540    		 Chlamydomonas
    reinhardtii
    3055    		 34887394 Assembly1
    rna:1:3~181 25~26,118,125~127
    rna:2:3~88 1~10,12~14,139~141,151
    rna:4:1~118 6,149~153,166~175,177,179~184
    rna:6:2~137 138~149,169
    rna:7:2~673 18~20,29~30,42,59~60,70,72~73,
    77,79~80,82~84,88~90,94,106,11
    1~113,116~117,122~123,134~135,
    154~155,158~159,164~165
    rna:8:58~493 17~18,76~77,114,122,136~137,15
    5~157,160
    9945 7pkt:4
    (3.0Å)
    		 118 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00023359BD RF02541 Chlamydomonas
    reinhardtii
    3055    		 34887394 Assembly1
    rna:2:3~88 41~42,48~50,75,86,98
    rna:0:25~99 9~11,19~20
    rna:3:1~184 2,26~29,31~32,35~39,41~47,49,7
    5~76
    rna:5:1~160 34,78~80,83,91~97,99~114,116
    rna:6:2~137 34,44~45,76~77,93~94
    rna:7:2~673 6~8,20,23,56~57,64~69,83~84
    rna:8:58~493 48,60,62~63,65
    9946 7pkt:5
    (3.0Å)
    		 149 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00023359BA RF02541 Chlamydomonas
    reinhardtii
    3055    		 34887394 Assembly1
    rna:4:1~118 106~109,117,120~133,136
    rna:6:2~137 133~140
    rna:7:2~673 101~102,104,107
    rna:8:58~493 44,96~98,100~101
    9947 7pkt:6
    (3.0Å)
    		 136 N/A URS00023359B4 N/A Chlamydomonas
    reinhardtii
    3055    		 34887394 Assembly1
    rna:1:3~181 23~24,27~29,31~32,52,55,67~69
    rna:2:3~88 58~59,61~69
    rna:3:1~184 8,10~19,42~43,57~58,60~61
    rna:4:1~118 6,8~14
    rna:5:1~160 2~8
    rna:7:2~673 62,69~79,81~83,94~109,111~113,
    126~129,133~135
    rna:8:58~493 62,75,95
    9948 7pkt:7
    (3.0Å)
    		 578 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00023359B8 RF02541
    RF02540    		 Chlamydomonas
    reinhardtii
    3055    		 34887394 Assembly1
    rna:2:3~88 367~371,379~381,383,385~386,40
    5
    rna:3:1~184 20,22~24,37,63,80,143~150,153,
    157~159,331,365,418~422,530,53
    5~537,626
    rna:4:1~118 377~378,380~381,386~388,539,55
    6~558,561~563
    rna:5:1~160 374~377,388~389
    rna:6:2~137 4~11,15~16,23,27~31,38~39,43~5
    0,52,353~354,360~367,410
    rna:8:58~493 34,41~43,54~57,66~68,73~74,123
    ~124,127~129,151~152,155~156,2
    88~289,302~306,316,348~351,356
    ~357,363,372,380~382,393~417,4
    19~425,427~428,532~535,539~540
    ,547~548,571,627~628,659~660,6
    63~672
    9949 7pkt:8
    (3.0Å)
    		 413 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00023359B7 RF02541
    RF02540    		 Chlamydomonas
    reinhardtii
    3055    		 34887394 Assembly1
    rna:2:3~88 143~147
    rna:3:1~184 73~75,85,87~90,93~94,233~234,2
    56,258
    rna:4:1~118 93,101~102,104,139~141
    rna:5:1~160 108~109,119,132~133,160~161,16
    3,214~215
    rna:6:2~137 147,258,397
    rna:7:2~673 58~66,69~75,78~83,86~91,94~96,
    99~100,141~145,147~149,194~197
    ,202,204~205,217,222~223,230,2
    32~238,241~243,249~254,256~271
    ,374~375,377,382~387,397~400,4
    02~405,410~412,414,444~447
    9950 7po2:5
    (3.09Å)
    		 71 N/A URS0000D77905 N/A Homo
    sapiens
    9606    		 35676484
    749

    996

    779

    M043_0.6

    1144    		 Assembly1
    rna:A:648~1602 30~32,34,38~41
    rna:6:-3~28 34~37
    9951 7po2:6
    (3.09Å)
    		 31 N/A N/A N/A Homo
    sapiens
    9606    		 35676484
    1148    		 Assembly1
    rna:A:648~1602 -3,-1,1~3,6
    rna:5:1~76 1~3
    9952 7po2:A
    (3.09Å)
    		 955 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0001A24B4C RF00177 Homo
    sapiens
    9606    		 35676484
    1321

    886

    1302

    156

    748

    749

    1207

    M027_0.6

    979

    M089_0.6

    82

    495

    175

    399

    492

    s44

    M043_0.6

    M033_0.6

    M329_0.6

    1194

    1197

    1196

    938

    M142_0.6

    509

    1290

    1031

    760

    994

    M164_0.6

    1312

    1273

    779

    778

    s14

    120

    121

    M047_0.6

    M169_0.6

    M274_0.6

    M325_0.6

    1354

    78

    800

    17

    1186

    M331_0.6

    1241

    M143_0.6

    1364

    M016_0.6

    33

    s61    		 Assembly1
    rna:5:1~76 1078,1220,1358~1359,1422~1424,
    1484
    rna:6:-3~28 993,1179,1481,1484~1485,1563
    9953 7pwg:1
    (2.75Å)
    		 2450 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00023358CC RF02543
    RF02540    		 Giardia
    lamblia
    ATCC
    50803
    184922    		 35100413 Assembly1
    rna:3:2~118 710~713,764,766~767,865,880,90
    1~902
    rna:4:1~139 4~22,58,122,279,282~287,289~29
    2,295~296,299,301~302,319~320,
    353~357,359~367,403~404,1082~1
    083,1106,1128,1213,1256,1464~1
    466,1873
    rna:w:1~76 1697~1698,1723,2187~2188,2215~
    2216
    rna:E:74~76 2042~2044,2241~2242,2391
    9954 7pwg:3
    (2.75Å)
    		 117 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000044BDD8 RF00001 Giardia
    lamblia
    ATCC
    50803
    184922    		 35100413 Assembly1
    rna:1:4~2694 78~80,85,89,98~99,101~103
    9955 7pwg:4
    (2.75Å)
    		 138 N/A URS00023358B4 N/A Giardia
    lamblia
    ATCC
    50803
    184922    		 35100413 Assembly1
    rna:1:4~2694 3,5~7,9~14,16~23,25~32,34,36~3
    8,41,53~55,104,108,112~113,123
    ~134,136~139
    9956 7pwg:w
    (2.75Å)
    		 14 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00023358BC RF00005 Giardia
    lamblia
    ATCC
    50803
    184922    		 35100413 Assembly1
    rna:1:4~2694 3,70~71,75~76
    9957 7pwo:1
    (2.75Å)
    		 2448 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00023358B7 RF02543
    RF02540    		 Giardia
    lamblia
    ATCC
    50803
    184922    		 35100413 Assembly1
    rna:3:2~118 710~713,764,766~767,865,880,90
    1~902
    rna:42:1~139 4~22,58,122,279,282~287,289~29
    2,295~296,299,301~302,319~320,
    353~357,359~367,403~404,1082~1
    083,1106~1107,1128,1213,1256,1
    464~1466,1873
    rna:w2:1~76 1697~1698,1722~1723,2187~2188,
    2215~2216
    rna:E:74~76 2042~2044,2241~2242,2391
    rna:2:2~1452 562~563,1566~1567,1613,1678,16
    82~1683,1694,1742,1746,1749~17
    50,1778~1779,1789~1790
    9958 7pwo:2
    (2.75Å)
    		 1355 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00023358C0 RF01960
    RF01959
    RF00177    		 Giardia
    lamblia
    ATCC
    50803
    184922    		 35100413 Assembly1
    rna:1:4~2694 509~510,665,723~724,746~747,86
    5,1330~1331,1341~1343,1353,139
    9~1400,1410~1411,1433
    9959 7pwo:3
    (2.75Å)
    		 117 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000044BDD8 RF00001 Giardia
    lamblia
    ATCC
    50803
    184922    		 35100413 Assembly1
    rna:1:4~2694 78~80,85,89,98~99,101~103
    9960 7pwo:42
    (2.75Å)
    		 138 N/A URS00023358B4 N/A Giardia
    lamblia
    ATCC
    50803
    184922    		 35100413 Assembly1
    rna:1:4~2694 3,5~14,16~23,25~32,34,36~38,41
    ,53~55,104,112~113,123~134,136
    ~139
    9961 7pwo:w2
    (2.75Å)
    		 14 GO:0030533 (F) triplet codon-amino aci... URS00023358D1 RF00005 Giardia
    lamblia
    ATCC
    50803
    184922    		 35100413 Assembly1
    rna:1:4~2694 3,70~71,75~76
    9962 7pzy:1
    (2.32Å)
    		 3209 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000C2FD9C RF02540
    RF02543    		 Candida
    albicans
    SC5314
    237561    		 35613268 Assembly1
    rna:3:1~121 992~995,1048,1050~1052,1152,11
    67,1193,1199
    rna:4:1~158 3~22,58,142,330~337,339~342,34
    4~346,349,351,368~369,404~419,
    654~655,689,1390~1391,1394,141
    4~1416,1437,1526,1554,1557,158
    0~1581,1614~1615,1826~1828,236
    4,2557,2966~2967
    rna:10:1~76 2188~2189,2213~2214,2736~2737,
    2765~2766
    rna:A:1~1785 842~843,1931~1932,2103,2169,21
    74,2185~2186,2233~2234,2237,22
    40~2241,2268~2270,2280~2281
    9963 7pzy:10
    (2.32Å)
    		 16 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS0002335908 RF00005 Candida
    albicans
    SC5314
    237561    		 35613268 Assembly1
    rna:1:3~3361 3~4,70~71,75~76
    9964 7pzy:3
    (2.32Å)
    		 121 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001B6144 RF00001 Candida
    albicans
    SC5314
    237561    		 35613268 Assembly1
    rna:1:3~3361 79~82,86,90,100,102~104
    9965 7pzy:4
    (2.32Å)
    		 158 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000082EA4 RF00002 Candida
    albicans
    SC5314
    237561    		 35613268 Assembly1
    rna:1:3~3361 1~22,24~33,35~37,40~41,53~54,1
    04,109,112~115,117,125~126,129
    ,136~155
    9966 7pzy:A
    (2.32Å)
    		 1692 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000059AE3B RF01960
    RF01959
    RF00177    		 Candida
    albicans
    SC5314
    237561    		 35613268 Assembly1
    rna:1:3~3361 626~627,898,956~957,980,1108,1
    631~1632,1642~1644,1654~1655,1
    733~1734,1742,1744~1746,1767
    9967 7q08:1
    (2.56Å)
    		 3209 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000C2FD9C RF02540
    RF02543    		 Candida
    albicans
    SC5314
    237561    		 35613268 Assembly1
    rna:3:1~121 992~994,1048,1050~1052,1152,11
    67,1193,1199
    rna:4:1~158 4~22,58,142,330~337,339~342,34
    5~346,349,351,368~369,404~419,
    654~655,689,1390~1391,1394,141
    5,1437,1526,1554,1557,1580,161
    4~1615,1826~1827,2364,2557,296
    6~2967
    rna:A:1~1785 842,844,1931~1932,2103,2169,21
    73~2174,2185~2186,2233~2234,22
    36~2237,2240~2241,2268~2270,22
    80~2282,2308
    9968 7q08:3
    (2.56Å)
    		 121 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001B6144 RF00001 Candida
    albicans
    SC5314
    237561    		 35613268 Assembly1
    rna:1:3~3361 79~82,86,90,100,102~103
    9969 7q08:4
    (2.56Å)
    		 158 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000082EA4 RF00002 Candida
    albicans
    SC5314
    237561    		 35613268 Assembly1
    rna:1:3~3361 1,3~22,24~33,35~37,40~41,53~54
    ,104,109,114~115,117,125~126,1
    29,137~152,154~155
    9970 7q08:A
    (2.56Å)
    		 1692 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000059AE3B RF01960
    RF01959
    RF00177    		 Candida
    albicans
    SC5314
    237561    		 35613268 Assembly1
    rna:1:3~3361 626~627,898,956~957,980,1108,1
    631~1633,1642~1644,1654~1655,1
    733~1734,1742,1744~1746,1767
    9971 7q0f:1
    (2.64Å)
    		 3209 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000C2FD9C RF02540
    RF02543    		 Candida
    albicans
    SC5314
    237561    		 35613268 Assembly1
    rna:3:1~121 992~995,1048,1050~1052,1152,11
    67,1193,1199
    rna:4:1~158 3~22,58,142,330~337,339~342,34
    5~346,349,351,368~369,404~419,
    654~655,689,1390~1391,1394,141
    5~1416,1437~1438,1526,1554,155
    7,1580,1614~1615,1826~1828,236
    4,2557,2966~2967
    rna:A:1~1785 842,1931~1932,2103,2169,2173~2
    174,2185~2186,2233~2234,2236~2
    237,2240~2241,2268~2269,2280~2
    282,2308
    9972 7q0f:3
    (2.64Å)
    		 121 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001B6144 RF00001 Candida
    albicans
    SC5314
    237561    		 35613268 Assembly1
    rna:1:3~3361 79~82,86,90,100,102~104
    9973 7q0f:4
    (2.64Å)
    		 158 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000082EA4 RF00002 Candida
    albicans
    SC5314
    237561    		 35613268 Assembly1
    rna:1:3~3361 1~22,24~33,35~37,40~41,53~54,1
    04,109,112~115,117,125~126,129
    ,136~156
    9974 7q0f:A
    (2.64Å)
    		 1692 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000059AE3B RF01960
    RF01959
    RF00177    		 Candida
    albicans
    SC5314
    237561    		 35613268 Assembly1
    rna:1:3~3361 626~627,898,956~957,980,1108,1
    631~1633,1642,1644,1654,1733~1
    734,1742,1744~1745,1767
    9975 7q0p:1
    (2.77Å)
    		 3209 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000C2FD9C RF02540
    RF02543    		 Candida
    albicans
    SC5314
    237561    		 35613268 Assembly1
    rna:3:1~121 992~995,1048,1050~1052,1152,11
    67,1193,1199
    rna:4:1~158 3~22,58,142,330~337,339~342,34
    4~346,349,351,368~369,404~419,
    654~655,689,1390~1391,1394,141
    4~1416,1437,1526,1554,1557,158
    0~1581,1614~1615,1826~1828,236
    4,2557,2966~2967
    rna:10:1~76 2188~2189,2213~2214,2736~2737,
    2765~2766
    rna:A:1~1785 842~843,1931~1932,2103,2169,21
    74,2185~2186,2233~2234,2237,22
    40~2241,2268~2270,2280~2281
    9976 7q0p:10
    (2.77Å)
    		 14 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS0000D22C51 RF00005 Candida
    albicans
    SC5314
    237561    		 35613268 Assembly1
    rna:1:3~3361 3~4,70~71,75~76
    9977 7q0p:3
    (2.77Å)
    		 121 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001B6144 RF00001 Candida
    albicans
    SC5314
    237561    		 35613268 Assembly1
    rna:1:3~3361 79~82,86,90,100,102~104
    9978 7q0p:4
    (2.77Å)
    		 158 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000082EA4 RF00002 Candida
    albicans
    SC5314
    237561    		 35613268 Assembly1
    rna:1:3~3361 1~22,24~33,35~37,40~41,53~54,1
    04,109,112~115,117,125~126,129
    ,136~155
    9979 7q0p:A
    (2.77Å)
    		 1692 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000059AE3B RF01960
    RF01959
    RF00177    		 Candida
    albicans
    SC5314
    237561    		 35613268 Assembly1
    rna:1:3~3361 626~627,898,956~957,980,1108,1
    631~1632,1642~1644,1654~1655,1
    733~1734,1742,1744~1746,1767
    9980 7q0r:1
    (2.67Å)
    		 3209 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000C2FD9C RF02540
    RF02543    		 Candida
    albicans
    SC5314
    237561    		 35613268 Assembly1
    rna:3:1~121 992~995,1048,1050~1052,1152,11
    67,1193,1199
    rna:4:1~158 3~22,58,142,330~337,339~342,34
    4~346,349,351,368~369,404~419,
    654~655,689,1390~1391,1394,141
    4~1416,1437,1526,1554,1557,158
    0~1581,1614~1615,1826~1828,236
    4,2557,2966~2967
    rna:10:1~76 2188~2189,2213~2214,2736~2737,
    2765~2766
    rna:A:1~1785 842~843,1931~1932,2103,2169,21
    74,2185~2186,2233~2234,2237,22
    40~2241,2268~2270,2280~2281
    9981 7q0r:10
    (2.67Å)
    		 14 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS0000D22C51 RF00005 Candida
    albicans
    SC5314
    237561    		 35613268 Assembly1
    rna:1:3~3361 3~4,70~71,75~76
    9982 7q0r:3
    (2.67Å)
    		 121 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001B6144 RF00001 Candida
    albicans
    SC5314
    237561    		 35613268 Assembly1
    rna:1:3~3361 79~82,86,90,100,102~104
    9983 7q0r:4
    (2.67Å)
    		 158 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000082EA4 RF00002 Candida
    albicans
    SC5314
    237561    		 35613268 Assembly1
    rna:1:3~3361 1~22,24~33,35~37,40~41,53~54,1
    04,109,112~115,117,125~126,129
    ,136~155
    9984 7q0r:A
    (2.67Å)
    		 1692 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000059AE3B RF01960
    RF01959
    RF00177    		 Candida
    albicans
    SC5314
    237561    		 35613268 Assembly1
    rna:1:3~3361 626~627,898,956~957,980,1108,1
    631~1632,1642~1644,1654~1655,1
    733~1734,1742,1744~1746,1767
    9985 7q4k:AA
    (3.0Å)
    		 1534 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000081169C RF00177
    RF01959
    RF02542
    RF01960    		 Escherichia
    coli
    562    		 37393329 Assembly1
    rna:BA:1~2903 702,784,899,1407~1409,1418~141
    9,1429,1473~1475,1483~1484,149
    2,1494~1496,1517
    rna:D2:1~76 790,966,1229,1338,1340,1400
    rna:D3:1~76 693~694,1382~1383
    rna:D4:1~9 693,926,1400~1402,1493,1498
    9986 7q4k:BA
    (3.0Å)
    		 2897 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E25C RF02541 Escherichia
    coli
    562    		 37393329 Assembly1
    rna:AA:1~1534 1700~1704,1832,1837,1848,1912~
    1913,1915~1916,1919~1920,1947~
    1949,1959~1961
    rna:BB:1~120 861~863,915,917~918,958,2340
    rna:D2:1~76 1907~1909,1923,2251~2253,2450~
    2451,2602
    rna:D3:1~76 1851,2112,2168,2180~2181,2394~
    2395,2421~2422,2432
    9987 7q4k:BB
    (3.0Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000049E57 RF00001 Escherichia
    coli
    562    		 37393329 Assembly1
    rna:BA:1~2903 41,78~80,89,97,99~100
    9988 7q4k:D2
    (3.0Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000261775C RF00005 Escherichia
    coli
    562    		 37393329 Assembly1
    rna:AA:1~1534 30~31,34,38~39,42
    rna:BA:1~2903 11~12,24,74~76
    rna:D4:1~9 34~37
    9989 7q4k:D3
    (3.0Å)
    		 75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    562    		 37393329 Assembly1
    rna:AA:1~1534 34,37~38
    rna:BA:1~2903 17,19,56,71~72,75~76
    rna:D4:1~9 34~37
    9990 7q4o:2
    (2.1Å)
    		 35 GO:0045131 (F) pre-mRNA branch point b...
    GO:0000348 (P) mRNA branch site recogn...
    GO:0005686 (C) U2 snRNP    		 URS00003EE995 RF00004 Homo
    sapiens
    9606    		 34822310 Assembly1
    rna:h:1~13 31~42
    9991 7q4o:h
    (2.1Å)
    		 13 N/A URS00023358E5 N/A synthetic
    construct
    32630    		 34822310 Assembly1
    rna:2:29~63 1~9,11~13
    9992 7q7x:A
    (2.8Å)
    		 14 N/A URS00023358DC N/A synthetic
    construct
    32630    		 35301481 Assembly1
    rna:B:1~24 7~14
    rna:C:25~48 2~8
    9993 7q7x:B
    (2.8Å)
    		 24 N/A URS00023358C9 N/A synthetic
    construct
    32630    		 35301481 Assembly1
    rna:A:1~14 2~10
    rna:C:25~48 9~11,13~15,17~24
    9994 7q7x:C
    (2.8Å)
    		 24 N/A URS00023358B5 N/A synthetic
    construct
    32630    		 35301481 Assembly1
    rna:A:1~14 34,37~38,44~48
    rna:B:1~24 25~31,33~35,38~39,41,43
    9995 7q7y:A
    (2.9Å)
    		 14 N/A URS00023358DF N/A synthetic
    construct
    32630    		 35301481 Assembly1
    rna:B:1~24 7~14
    rna:C:25~48 2~8
    9996 7q7y:B
    (2.9Å)
    		 24 N/A URS00023358C9 N/A synthetic
    construct
    32630    		 35301481 Assembly1
    rna:A:1~14 2~10,12
    rna:C:25~48 9~11,13~15,17~24
    9997 7q7y:C
    (2.9Å)
    		 24 N/A URS00023358B5 N/A synthetic
    construct
    32630    		 35301481 Assembly1
    rna:A:1~14 34,37~38,44~48
    rna:B:1~24 25~31,33~35,38~39,41,43
    9998 7q7z:A
    (3.26Å)
    		 14 N/A URS00023358DC N/A synthetic
    construct
    32630    		 35301481 Assembly1
    rna:B:1~24 7~14
    rna:C:25~48 2~8
    9999 7q7z:B
    (3.26Å)
    		 24 N/A URS00023358C9 N/A synthetic
    construct
    32630    		 35301481 Assembly1
    rna:A:1~14 2~12
    rna:C:25~48 9~11,13~15,19~23
    10000 7q7z:C
    (3.26Å)
    		 24 N/A URS00023358B5 N/A synthetic
    construct
    32630    		 35301481 Assembly1
    rna:A:1~14 34,37~38,44~48
    rna:B:1~24 25~30,33~35,38~41,43
    << < 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 > >>
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    Reference:
  • Chengxin Zhang, P. Lydia Freddolino (2023) FURNA: a database for function annotations of RNA structures, bioRxiv 2023.12.19.572314.

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