SEQ2FUN

FURNA
Download all results in tab-seperated text for 14210 RNAs.
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  • Hover over Ligand to view the name of the ligand and the ligand-binding nucleotides on the RNA.

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    # PDB
    (Resolution)    		 Length EC number
    & GO term     		RNAcentral Rfam Taxon PubMed ATtRACT
    motif     		Ligand &
    binding nucleotides
    10201 7rq8:2x
    (2.5Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    562    		 34707295 Assembly2
    rna:2A:6~2897 11~13,24~25,74~76
    rna:2a:4~1532 30~32,34,38~41
    rna:2v:12~24 34~37
    rna:2y:1~76 39~40
    10202 7rq8:2y
    (2.5Å)
    		 73 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    562    		 34707295 Assembly2
    rna:2A:6~2897 19,56,71~72,76
    rna:2x:2~76 35~36
    10203 7rq9:1A
    (2.6Å)
    		 2871 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001698E8 RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    HB8
    300852    		 34707295 Assembly1
    rna:1B:1~120 861~864,915,917~919,958
    rna:1a:4~1533 1689,1701~1704,1832,1836~1837,
    1846,1848,1912~1913,1915~1916,
    1919~1920,1947~1949,1959~1961,
    2863~2864
    rna:1w:1~74 882~883,896~897,1913,2482~2483
    ,2554~2555
    rna:1x:2~76 1907~1909,1922~1924,2061,2063~
    2064,2251~2253,2255,2439,2450~
    2451,2585~2586,2601~2602
    rna:1y:1~76 1851,2112,2169,2394~2395,2421~
    2422,2432
    10204 7rq9:1B
    (2.6Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DEE8 RF00001 Thermus
    thermophilus
    HB8
    300852    		 34707295 Assembly1
    rna:1A:6~2897 78~81,90,97~98,100~102
    10205 7rq9:1a
    (2.6Å)
    		 1500 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DFED RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 34707295 Assembly1
    rna:1A:6~2897 702,783~784,899~900,1407~1409,
    1418,1429,1442A,1473~1475,1483
    ~1484,1494~1496,1517
    rna:1v:12~24 926,1196,1397,1400~1401,1492~1
    493,1498,1503,1505
    rna:1w:1~74 530,1054,1493
    rna:1x:2~76 790,966,1229~1230,1338~1341,14
    00
    10206 7rq9:1v
    (2.6Å)
    		 13 N/A N/A N/A Tequatrovirus
    T4
    10665    		 34707295 Assembly1
    rna:1a:4~1533 12~13,15~20,22~24
    rna:1w:1~74 19~21
    rna:1x:2~76 16~18
    10207 7rq9:1w
    (2.6Å)
    		 72 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    562    		 34707295 Assembly1
    rna:1A:6~2897 19,37~38,56,64,74
    rna:1a:4~1533 34~37
    rna:1v:12~24 34~37
    10208 7rq9:1x
    (2.6Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    562    		 34707295 Assembly1
    rna:1A:6~2897 3,11~13,24~25,74~76
    rna:1a:4~1533 29~32,34,38,40~41
    rna:1v:12~24 34~37
    10209 7rq9:1y
    (2.6Å)
    		 74 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    562    		 34707295 Assembly1
    rna:1A:6~2897 19,56,71~72,76
    10210 7rq9:2A
    (2.6Å)
    		 2800 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001698E8 RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    HB8
    300852    		 34707295 Assembly2
    rna:2B:1~120 861~864,915~918,958
    rna:2a:4~1532 1689,1700~1704,1832,1836~1837,
    1846,1848,1912~1916,1919~1920,
    1947~1948,1959~1961,2864
    rna:2w:2~74 881~882,896~897,1913,2482,2507
    ,2554~2555
    rna:2x:2~76 1907~1909,1922~1924,2063~2064,
    2251~2253,2255,2439,2450~2451,
    2585~2586,2601~2602
    rna:2y:1~76 1851,2112,2169,2394~2395,2421~
    2422
    10211 7rq9:2B
    (2.6Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DEE8 RF00001 Thermus
    thermophilus
    HB8
    300852    		 34707295 Assembly2
    rna:2A:6~2897 78~81,90,97~98,100~102
    10212 7rq9:2a
    (2.6Å)
    		 1503 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DFED RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 34707295 Assembly2
    rna:2A:6~2897 702,783~784,899~900,1407~1409,
    1418,1429,1442A,1473~1475,1483
    ~1484,1493~1496,1517
    rna:2v:12~24 530,926,1196,1397,1400~1402,14
    92~1493,1498,1503,1505,1507
    rna:2w:2~74 530,1054,1493
    rna:2x:2~76 790,966,1229~1230,1338~1340,14
    00
    10213 7rq9:2v
    (2.6Å)
    		 13 N/A N/A N/A Tequatrovirus
    T4
    10665    		 34707295 Assembly2
    rna:2a:4~1532 12~13,15~24
    rna:2w:2~74 19~21
    rna:2x:2~76 16~18
    10214 7rq9:2w
    (2.6Å)
    		 70 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    562    		 34707295 Assembly2
    rna:2A:6~2897 19,37~38,55~56,64,74
    rna:2a:4~1532 34~37
    rna:2v:12~24 34~37
    10215 7rq9:2x
    (2.6Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    562    		 34707295 Assembly2
    rna:2A:6~2897 11~13,24~25,74~76
    rna:2a:4~1532 30~32,34,38~41
    rna:2v:12~24 34~37
    rna:2y:1~76 39~40
    10216 7rq9:2y
    (2.6Å)
    		 73 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    562    		 34707295 Assembly2
    rna:2A:6~2897 19,56,71~72,76
    rna:2x:2~76 35~36
    10217 7rqa:1A
    (2.4Å)
    		 2872 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001698E8 RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    HB8
    300852    		 35165455 Assembly1
    rna:1B:1~120 861~864,915,917~919,958
    rna:1a:4~1533 1700~1701,1703~1704,1832,1837,
    1846,1848,1895,1912~1916,1919~
    1920,1947~1948,1959~1961,2863~
    2864
    rna:1w:73~76 2451~2452,2504,2506~2507,2553~
    2555,2583~2585,2602
    rna:1x:73~76 2251~2253,2439,2450~2451,2601~
    2602
    10218 7rqa:1B
    (2.4Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DEE8 RF00001 Thermus
    thermophilus
    HB8
    300852    		 35165455 Assembly1
    rna:1A:6~2897 78~81,90,97~98,100~102
    10219 7rqa:1a
    (2.4Å)
    		 1500 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DFED RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 35165455 Assembly1
    rna:1A:6~2897 702,784,899,1407~1409,1418,142
    9,1442A,1474~1475,1483~1484,14
    91~1496,1517
    10220 7rqa:2A
    (2.4Å)
    		 2867 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001698E8 RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    HB8
    300852    		 35165455 Assembly2
    rna:2B:1~120 861~864,915,917~919,958
    rna:2a:4~1533 1689,1700~1701,1703~1704,1832,
    1836~1837,1846,1848,1912~1916,
    1919~1920,1947~1948,1950,1959~
    1961,2863~2864
    rna:2w:73~76 2451~2452,2504,2506~2507,2553~
    2555,2583~2585,2602
    rna:2x:73~76 2251~2253,2439,2450~2451,2601~
    2602
    10221 7rqa:2B
    (2.4Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DEE8 RF00001 Thermus
    thermophilus
    HB8
    300852    		 35165455 Assembly2
    rna:2A:6~2897 78~81,90,97~98,100~102
    10222 7rqa:2a
    (2.4Å)
    		 1504 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DFED RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 35165455 Assembly2
    rna:2A:6~2897 702,783~784,899~900,1407~1409,
    1418,1420,1429~1430,1442A,1474
    ~1475,1483~1484,1491~1496,1517
    10223 7rqb:1A
    (2.45Å)
    		 2872 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001698E8 RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    HB8
    300852    		 35165455 Assembly1
    rna:1B:1~120 861~864,915,917~919,958
    rna:1a:4~1533 1700~1704,1832,1836~1837,1846,
    1848,1912~1913,1915~1916,1919~
    1920,1947~1949,1959~1961,2863~
    2864
    rna:1w:73~76 2451~2452,2504,2506~2507,2553~
    2555,2583~2585,2602
    rna:1x:73~76 2251~2253,2439,2450~2451,2585,
    2601~2602
    10224 7rqb:1B
    (2.45Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DEE8 RF00001 Thermus
    thermophilus
    HB8
    300852    		 35165455 Assembly1
    rna:1A:6~2897 78~81,90,97~98,100~101
    10225 7rqb:1a
    (2.45Å)
    		 1500 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DFED RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 35165455 Assembly1
    rna:1A:6~2897 702,784,899~900,1407~1409,1418
    ,1429,1442A,1473~1475,1483~148
    4,1491~1496,1517
    10226 7rqb:2A
    (2.45Å)
    		 2867 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001698E8 RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    HB8
    300852    		 35165455 Assembly2
    rna:2B:1~120 861~864,915~919,958
    rna:2a:4~1533 1689,1700~1704,1832,1836~1837,
    1846,1848,1912~1916,1919~1920,
    1947~1948,1950,1959~1961,2863~
    2864
    rna:2w:73~76 2451~2452,2504,2506~2507,2553~
    2555,2583~2585,2602
    rna:2x:73~76 2251~2253,2439,2450~2451,2601~
    2602
    10227 7rqb:2B
    (2.45Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DEE8 RF00001 Thermus
    thermophilus
    HB8
    300852    		 35165455 Assembly2
    rna:2A:6~2897 78~81,90,97~98,100~102
    10228 7rqb:2a
    (2.45Å)
    		 1504 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DFED RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 35165455 Assembly2
    rna:2A:6~2897 702,783~784,899~900,1407~1409,
    1418,1420,1429~1430,1442A,1473
    ~1475,1483~1484,1491,1493~1496
    ,1517
    10229 7rqc:1A
    (2.5Å)
    		 2872 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001698E8 RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    HB8
    300852    		 35165455 Assembly1
    rna:1B:1~120 861~863,915,917~919,958
    rna:1a:4~1533 1689,1701~1704,1832,1836~1837,
    1846,1848,1912~1913,1916,1919~
    1920,1947~1948,1959~1961,2863~
    2864
    rna:1w:73~76 2451~2452,2504,2506~2507,2553~
    2555,2583~2585,2602
    rna:1x:73~76 2063,2251~2252,2439,2450~2451,
    2601~2602
    10230 7rqc:1B
    (2.5Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DEE8 RF00001 Thermus
    thermophilus
    HB8
    300852    		 35165455 Assembly1
    rna:1A:6~2897 78~81,90,97~98,100~101
    10231 7rqc:1a
    (2.5Å)
    		 1500 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DFED RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 35165455 Assembly1
    rna:1A:6~2897 702,784,899~900,1407~1409,1418
    ,1429,1442A,1473~1475,1483~148
    4,1491~1496,1517
    10232 7rqc:2A
    (2.5Å)
    		 2867 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001698E8 RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    HB8
    300852    		 35165455 Assembly2
    rna:2B:1~120 861~864,915,917~919,958
    rna:2a:4~1533 1689,1700~1704,1832,1836~1837,
    1846,1848,1912~1916,1919~1920,
    1947~1948,1950,1959~1961,2863~
    2864
    rna:2w:73~76 2451~2452,2504,2506~2507,2553~
    2555,2583~2585,2602
    rna:2x:73~76 2251~2253,2439,2450~2451,2601~
    2602
    10233 7rqc:2B
    (2.5Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DEE8 RF00001 Thermus
    thermophilus
    HB8
    300852    		 35165455 Assembly2
    rna:2A:6~2897 78~81,90,97~102
    10234 7rqc:2a
    (2.5Å)
    		 1504 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DFED RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 35165455 Assembly2
    rna:2A:6~2897 702,783~784,899,1407~1409,1418
    ,1420,1429,1442A,1473~1475,148
    3~1484,1491~1496,1517
    10235 7rqd:1A
    (2.5Å)
    		 2872 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001698E8 RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    HB8
    300852    		 35165455 Assembly1
    rna:1B:1~120 861~863,915,917~919,958
    rna:1a:4~1533 1689,1701~1704,1832,1836~1837,
    1846,1848,1895,1912~1914,1916,
    1919~1920,1947~1948,1959~1961,
    2863~2864
    rna:1w:73~76 2506~2507,2553~2555,2583~2585,
    2602
    rna:1x:73~76 2063~2064,2251~2252,2439,2450~
    2451,2601~2602
    10236 7rqd:1B
    (2.5Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DEE8 RF00001 Thermus
    thermophilus
    HB8
    300852    		 35165455 Assembly1
    rna:1A:6~2897 78~81,90,97~98,100~101
    10237 7rqd:1a
    (2.5Å)
    		 1500 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DFED RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 35165455 Assembly1
    rna:1A:6~2897 702,783~784,899~900,1407~1409,
    1418,1429,1442A,1473~1475,1483
    ~1484,1491~1496,1517
    10238 7rqd:2A
    (2.5Å)
    		 2867 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001698E8 RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    HB8
    300852    		 35165455 Assembly2
    rna:2B:1~120 861~864,915,917~919,958
    rna:2a:4~1533 1689,1700~1704,1832,1836~1837,
    1846,1848,1912~1916,1919~1920,
    1947~1950,1959~1961,2863
    rna:2w:73~76 2506~2507,2553~2555,2583~2585,
    2602
    rna:2x:73~76 2064,2251~2253,2439,2450~2451,
    2601~2602
    10239 7rqd:2B
    (2.5Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DEE8 RF00001 Thermus
    thermophilus
    HB8
    300852    		 35165455 Assembly2
    rna:2A:6~2897 78~81,90,97~102
    10240 7rqd:2a
    (2.5Å)
    		 1504 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DFED RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 35165455 Assembly2
    rna:2A:6~2897 702,783~784,899,1407~1409,1418
    ~1420,1429~1430,1442A,1473~147
    5,1483~1484,1491,1493~1496,151
    7
    10241 7rqe:1A
    (2.4Å)
    		 2872 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001698E8 RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    HB8
    300852    		 35165455 Assembly1
    rna:1B:1~120 861~864,915~919,958
    rna:1a:4~1533 1689,1700~1701,1703~1704,1832,
    1836~1837,1846,1848,1895,1912~
    1914,1916,1919~1920,1947~1948,
    1959~1961,2863~2864
    rna:1w:73~76 2506~2507,2553~2555,2583~2585,
    2602
    rna:1x:73~76 2064,2251~2253,2439,2450~2451,
    2601~2602
    10242 7rqe:1B
    (2.4Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DEE8 RF00001 Thermus
    thermophilus
    HB8
    300852    		 35165455 Assembly1
    rna:1A:6~2897 78~81,90,97~98,100~101
    10243 7rqe:1a
    (2.4Å)
    		 1500 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DFED RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 35165455 Assembly1
    rna:1A:6~2897 702,784,899,1407~1409,1418,142
    9,1442A,1474~1475,1483~1484,14
    91~1496,1517
    10244 7rqe:2A
    (2.4Å)
    		 2867 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001698E8 RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    HB8
    300852    		 35165455 Assembly2
    rna:2B:1~120 861~864,915,917~919,958
    rna:2a:4~1533 1689,1700~1704,1832,1836~1837,
    1846,1848,1912~1916,1919~1920,
    1947~1948,1950,1959~1961,2863~
    2864
    rna:2w:73~76 2506~2507,2553~2555,2583~2585,
    2602
    rna:2x:73~76 2063~2064,2251~2253,2439,2450~
    2451,2601~2602
    10245 7rqe:2B
    (2.4Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DEE8 RF00001 Thermus
    thermophilus
    HB8
    300852    		 35165455 Assembly2
    rna:2A:6~2897 78~81,90,97~98,100~102
    10246 7rqe:2a
    (2.4Å)
    		 1504 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DFED RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 35165455 Assembly2
    rna:2A:6~2897 702,783~784,899~900,1407~1409,
    1418,1420,1429,1442A,1473~1475
    ,1483~1484,1491,1493~1496,1517
    10247 7rr5:A
    (3.23Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS0002311986 RF00005 Saccharomyces
    cerevisiae
    4932    		 34706231 Assembly1
    rna:C1:3~3396 37~38,64,74~76
    rna:C2:1~1799 34~37
    rna:m:37~52 34,36~37
    10248 7rr5:C1
    (3.23Å)
    		 3221 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000061F377 RF02540
    RF02543    		 Saccharomyces
    cerevisiae
    4932    		 34706231
    M107_0.6

    M080_0.6

    M299_0.6

    16    		 Assembly1
    rna:C4:1~121 996~998,1054~1056,1171,1197,12
    03
    rna:C3:1~158 3~23,59,143,330~337,339~342,34
    5~346,349,351,368~369,404~419,
    656~657,691,1394~1395,1398~139
    9,1419,1441,1530,1558,1617~161
    9,1830~1832,2386,2585,2994~299
    5
    rna:C2:1~1799 846~848,1935,2125,2207,2255~22
    59,2262~2263,2290~2292,2302~23
    03
    rna:A:1~76 2256,2839,2851,2876,2922,2924,
    2952~2954,2971
    rna:P:1~76 2252,2266,2621,2819~2820,2954,
    2971
    10249 7rr5:C2
    (3.23Å)
    		 1771 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00005F2C2D RF01960
    RF01959
    RF00177    		 Saccharomyces
    cerevisiae
    4932    		 34706231
    101

    441

    M080_0.6

    386

    M107_0.6

    497

    490    		 Assembly1
    rna:C1:3~3396 628,913,971~973,1644~1646,1655
    ~1657,1667,1746~1747,1756~1758
    ,1780
    rna:A:1~76 577,1274,1756
    rna:P:1~76 1001,1191,1462,1575~1577,1637
    rna:m:37~52 577,904,1150,1637~1638,1755,17
    61
    10250 7rr5:C3
    (3.23Å)
    		 158 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001BF64E RF00002 Saccharomyces
    cerevisiae
    4932    		 34706231
    441    		 Assembly1
    rna:C1:3~3396 1~22,24~37,40,53~54,104,109,11
    3~115,125~126,129,136,138~152,
    154~157
    10251 7rr5:C4
    (3.23Å)
    		 121 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000055688D RF00001 Saccharomyces
    cerevisiae
    4932    		 34706231 Assembly1
    rna:C1:3~3396 79~82,86,90,100,102~103
    10252 7rr5:P
    (3.23Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00023119BF RF00005 Saccharomyces
    cerevisiae
    4932    		 34706231 Assembly1
    rna:C1:3~3396 11~12,24,74~76
    rna:C2:1~1799 30~32,34,38~41
    rna:m:37~52 34~37
    10253 7rr5:m
    (3.23Å)
    		 16 N/A N/A N/A Saccharomyces
    cerevisiae
    4932    		 34706231 Assembly1
    rna:C2:1~1799 42~43,45~48,50~51
    rna:A:1~76 49,51
    rna:P:1~76 46~48
    10254 7ryf:A
    (2.65Å)
    		 2685 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000231197A RF02540
    RF02541    		 Acinetobacter
    baumannii
    AB0057
    480119    		 35100868 Assembly1
    rna:B:1~115 859~861,913,915~916,948,955
    rna:a:3~1530 1701,1842,1955
    rna:v:1~77 2247~2249,2446~2447
    10255 7ryf:B
    (2.65Å)
    		 115 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00002D8B10 RF00001 Acinetobacter
    baumannii
    AB0057
    480119    		 35100868 Assembly1
    rna:A:9~2898 76~78,94,96~97
    10256 7ryf:a
    (2.65Å)
    		 1528 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00023119FB RF00177
    RF01959
    RF01960    		 Acinetobacter
    baumannii
    AB0057
    480119    		 35100868 Assembly1
    rna:A:9~2898 699,1415,1426,1480
    rna:v:1~77 963,1226~1227,1335~1337
    10257 7ryf:v
    (2.65Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00002D670D RF00005 Acinetobacter
    baumannii
    AB0057
    480119    		 35100868 Assembly1
    rna:A:9~2898 74~77
    rna:a:3~1530 31~33,35,41~42
    rna:w:1~3 35~38
    10258 7ryg:A
    (2.38Å)
    		 2685 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000231197A RF02540
    RF02541    		 Acinetobacter
    baumannii
    AB0057
    480119    		 35100868 Assembly1
    rna:B:1~115 859~861,913,915~916,955
    rna:a:3~1530 1701,1842,1955
    rna:v:1~77 1847,1887~1889,2390~2391,2417~
    2418,2428
    10259 7ryg:B
    (2.38Å)
    		 115 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00002D8B10 RF00001 Acinetobacter
    baumannii
    AB0057
    480119    		 35100868 Assembly1
    rna:A:9~2898 76~78,86,94,96~97
    10260 7ryg:a
    (2.38Å)
    		 1528 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00023119FB RF00177
    RF01959
    RF01960    		 Acinetobacter
    baumannii
    AB0057
    480119    		 35100868 Assembly1
    rna:A:9~2898 699,1426,1480
    rna:v:1~77 963,1226~1227,1335~1337
    10261 7ryg:v
    (2.38Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00002D670D RF00005 Acinetobacter
    baumannii
    AB0057
    480119    		 35100868 Assembly1
    rna:A:9~2898 3,71~73,76~77
    rna:a:3~1530 30~32,35,41~43
    rna:w:1~3 35~38
    10262 7ryh:A
    (2.43Å)
    		 2685 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000231197A RF02540
    RF02541    		 Acinetobacter
    baumannii
    AB0057
    480119    		 35100868 Assembly1
    rna:B:1~115 859~861,915~916,955
    10263 7ryh:B
    (2.43Å)
    		 115 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00002D8B10 RF00001 Acinetobacter
    baumannii
    AB0057
    480119    		 35100868 Assembly1
    rna:A:9~2898 76~78,86,94,96~97
    10264 7s0s:C
    (3.05Å)
    		 3119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000BC467B RF02540
    RF02541    		 Mycolicibacterium
    smegmatis
    1772    		 35357969 Assembly1
    rna:i:1~118 976~978,1030~1033
    10265 7s0s:i
    (3.05Å)
    		 118 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00000ACC0A RF00001 Mycolicibacterium
    smegmatis
    1772    		 35357969 Assembly1
    rna:C:2~3120 79~81,95,97~98
    10266 7s1g:A
    (2.48Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000044E875 RF00005 Escherichia
    coli
    562    		 35165456
    31588918
    29872003
    20383002
    32881101    		 Assembly1
    rna:4:10~15 34~37
    rna:C:1~1540 29~32,34,38~41
    rna:I:1~2904 11~13,24~25,74~76
    10267 7s1g:C
    (2.48Å)
    		 1540 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000D56C37 RF00177
    RF01959
    RF01960    		 Escherichia
    coli
    562    		 35165456
    31588918
    29872003
    20383002
    32881101    		 Assembly1
    rna:4:10~15 693,789,926,1400~1401,1498
    rna:A:1~76 790,966,1229,1338~1341,1400
    rna:I:1~2904 702,784,899,1407~1409,1418,142
    9,1474~1475,1483~1484,1492,149
    4~1496,1517
    10268 7s1g:I
    (2.48Å)
    		 2898 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B0F34 RF02540
    RF02541    		 Escherichia
    coli
    562    		 35165456
    31588918
    29872003
    20383002
    32881101    		 Assembly1
    rna:A:1~76 1907~1909,1922~1923,2064,2251~
    2253,2450~2451,2602
    rna:C:1~1540 1700~1701,1703,1832,1837,1846,
    1848,1912~1916,1919~1920,1947~
    1948,1959~1961
    rna:J:2~119 861~864,915,917~919,958,2340
    10269 7s1g:J
    (2.48Å)
    		 118 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000049E57 RF00001 Escherichia
    coli
    562    		 35165456
    31588918
    29872003
    20383002
    32881101    		 Assembly1
    rna:I:1~2904 41,78~81,89,96~97,99~100
    10270 7s1h:C
    (2.35Å)
    		 1540 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000D56C37 RF00177
    RF01959
    RF01960    		 Escherichia
    coli
    562    		 35165456
    31588918
    29872003
    20383002
    32881101    		 Assembly1
    rna:I:1~2904 702,784,899,1407~1409,1418,142
    9,1474~1475,1483~1484,1492,149
    4~1496,1517
    10271 7s1h:I
    (2.35Å)
    		 2898 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B0F34 RF02540
    RF02541    		 Escherichia
    coli
    562    		 35165456
    31588918
    29872003
    20383002
    32881101    		 Assembly1
    rna:C:1~1540 1700~1701,1703~1704,1832,1837,
    1846,1848,1912~1916,1919~1920,
    1947~1948,1959~1961
    rna:J:2~119 861~864,915,917~919,958,2339~2
    340
    10272 7s1h:J
    (2.35Å)
    		 118 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000049E57 RF00001 Escherichia
    coli
    562    		 35165456
    31588918
    29872003
    20383002
    32881101    		 Assembly1
    rna:I:1~2904 41,78~81,89,96~97,99~100
    10273 7s1i:A
    (2.48Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000044E875 RF00005 Escherichia
    coli
    562    		 35165456 Assembly1
    rna:4:10~15 34~37
    rna:C:1~1540 29~32,34,38~41
    rna:I:1~2904 11~13,24~25,74~76
    10274 7s1i:C
    (2.48Å)
    		 1540 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000D56C37 RF00177
    RF01959
    RF01960    		 Escherichia
    coli
    562    		 35165456 Assembly1
    rna:4:10~15 693,789,926,1400~1401,1498
    rna:A:1~76 790,966,1229,1338~1340,1400
    rna:I:1~2904 702,784,899,1407~1409,1418,142
    9,1474~1475,1483~1484,1492~149
    6,1517
    10275 7s1i:I
    (2.48Å)
    		 2898 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B0F34 RF02540
    RF02541    		 Escherichia
    coli
    562    		 35165456 Assembly1
    rna:A:1~76 1907~1909,1922~1923,2064,2251~
    2253,2439,2450~2451,2602
    rna:C:1~1540 1700~1701,1703~1704,1832,1836~
    1837,1846,1848,1912~1916,1919~
    1920,1947~1948,1959~1961
    rna:J:2~119 861~864,915,917~919,958,2340
    10276 7s1i:J
    (2.48Å)
    		 118 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000049E57 RF00001 Escherichia
    coli
    562    		 35165456 Assembly1
    rna:I:1~2904 41,78~81,89,96~97,99~100
    10277 7s1j:C
    (2.47Å)
    		 1540 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000D56C37 RF00177
    RF01959
    RF01960    		 Escherichia
    coli
    562    		 35165456 Assembly1
    rna:I:1~2904 702,784,899,1407~1409,1418~141
    9,1428~1429,1474~1475,1483~148
    4,1492~1496,1517
    10278 7s1j:I
    (2.47Å)
    		 2898 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B0F34 RF02540
    RF02541    		 Escherichia
    coli
    562    		 35165456 Assembly1
    rna:C:1~1540 1700~1701,1703~1704,1832,1837,
    1846~1848,1912~1916,1919~1920,
    1947~1948,1959~1960
    rna:J:2~119 861~864,915,917~919,958,2340
    10279 7s1j:J
    (2.47Å)
    		 118 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000049E57 RF00001 Escherichia
    coli
    562    		 35165456 Assembly1
    rna:I:1~2904 41,78~81,89,96~97,99~100
    10280 7s1k:A
    (2.42Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000044E875 RF00005 Escherichia
    coli
    562    		 35165456 Assembly1
    rna:4:10~15 34~37
    rna:C:1~1540 29~32,34,38~42
    rna:I:1~2904 12,24~25,74~76
    10281 7s1k:C
    (2.42Å)
    		 1540 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000D56C37 RF00177
    RF01959
    RF01960    		 Escherichia
    coli
    562    		 35165456 Assembly1
    rna:4:10~15 693,789,926,1400~1401,1498
    rna:A:1~76 790,966,1229~1230,1338~1340,14
    00
    rna:I:1~2904 702,784,899,1407~1409,1418~141
    9,1428~1429,1474~1475,1483~148
    4,1492~1496,1517
    10282 7s1k:I
    (2.42Å)
    		 2898 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B0F34 RF02540
    RF02541    		 Escherichia
    coli
    562    		 35165456 Assembly1
    rna:A:1~76 1907~1908,1922~1923,2063~2064,
    2251~2253,2450~2451,2602
    rna:C:1~1540 1700~1701,1703~1704,1832,1836~
    1837,1846,1848,1912~1916,1919~
    1920,1947~1948,1959~1961
    rna:J:2~119 861~864,915,917~919,958,2339~2
    340
    10283 7s1k:J
    (2.42Å)
    		 118 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000049E57 RF00001 Escherichia
    coli
    562    		 35165456 Assembly1
    rna:I:1~2904 41,78~81,89,96~97,99~100
    10284 7s7c:D
    (3.62Å)
    		 27 N/A URS00023359C8 N/A synthetic
    construct
    32630    		 35688134 Assembly1
    rna:L:1~10 1~11
    10285 7s7c:L
    (3.62Å)
    		 10 N/A URS00023359C8 N/A synthetic
    construct
    32630    		 35688134 Assembly1
    rna:D:1~30 1~10
    10286 7sa4:1
    (2.55Å)
    		 2903 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00021ED9BC RF02541 Escherichia
    coli
    562    		 35858322 Assembly1
    rna:2:1~1534 1689,1700~1704,1832,1836~1837,
    1846,1848,1912~1913,1915~1916,
    1919~1920,1947~1948,1950,1959~
    1961
    rna:4:1~120 861~863,915,917~919,958,2339~2
    340
    rna:5:0~76 1907~1909,1922~1924,2251~2253,
    2255,2450~2451,2602
    rna:6:1~77 1851~1852,2394~2395,2421~2422,
    2432
    10287 7sa4:2
    (2.55Å)
    		 1534 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000081169C RF00177
    RF01959
    RF02542
    RF01960    		 Escherichia
    coli
    562    		 35858322 Assembly1
    rna:1:1~2903 702,783~784,899,1407~1409,1418
    ,1420,1429,1473~1475,1483~1484
    ,1492,1494~1496,1517
    rna:5:0~76 790,966,1229,1338~1340,1400
    rna:6:1~77 693~694
    rna:7:13~25 693,789,926,1196,1397,1400,140
    2~1403,1498
    10288 7sa4:4
    (2.55Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000049E57 RF00001 Escherichia
    coli
    562    		 35858322 Assembly1
    rna:1:1~2903 41,78~81,96~97,99~100
    10289 7sa4:5
    (2.55Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    562    		 35858322 Assembly1
    rna:1:1~2903 10~12,24~25,74~76
    rna:2:1~1534 29~32,34,38~41
    rna:7:13~25 34~37
    10290 7sa4:6
    (2.55Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    562    		 35858322 Assembly1
    rna:1:1~2903 72,77
    rna:7:13~25 35~36
    10291 7sa4:7
    (2.55Å)
    		 13 N/A N/A N/A Escherichia
    coli
    562    		 35858322 Assembly1
    rna:2:1~1534 13~19,21~23
    rna:5:0~76 16~18
    10292 7sbb:X
    (3.1Å)
    		 33 N/A URS00023359B1 N/A synthetic
    construct
    32630    		 35595728 Assembly1
    rna:Z:1~43 1~5,7~11,13~17,19~23,25~27,29,
    31~33
    10293 7sbb:Z
    (3.1Å)
    		 43 N/A URS00023359B2 N/A Synechocystis
    sp.
    PCC
    6803
    1148    		 35595728 Assembly1
    rna:X:1~33 12~13,15~19,21~25,27~31,33~37,
    39~43
    10294 7sfr:A
    (2.6Å)
    		 3118 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00005E0FC6 RF02541 Mycobacterium
    tuberculosis
    1773    		 36827973 Assembly1
    rna:B:1~115 990~992,1044,1046~1047
    rna:a:8~1526 1938~1939,2071,2080,2082,2150~
    2152,2154,2157~2158,2185~2188,
    2197~2199
    10295 7sfr:B
    (2.6Å)
    		 115 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00005330B1 RF00001 Mycobacterium
    tuberculosis
    1773    		 36827973 Assembly1
    rna:A:5~3132 77~79,93,95~96
    10296 7sfr:a
    (2.6Å)
    		 1519 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00002C0A67 RF00177
    RF01959
    RF02542
    RF01960    		 Mycobacterium
    tuberculosis
    1773    		 36827973 Assembly1
    rna:A:5~3132 693,775,1400~1402,1411~1413,14
    22,1467,1476~1477,1485,1487~14
    89,1510
    10297 7ss9:1
    (3.9Å)
    		 2903 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000BC4674 RF02540
    RF02541    		 Escherichia
    coli
    K-12
    83333    		 34903725 Assembly1
    rna:3:2~1540 1701~1703,1836~1837,1846,1848,
    1894,1912~1914,1919~1920,1948,
    1959,1961
    rna:2:1~120 861~864,915~919,958
    rna:6:1~76 1850~1851,1891~1892,2112,2168,
    2180,2394,2421~2422,2432
    rna:5:1~76 1908~1909,2063~2064,2252,2255,
    2451,2602
    10298 7ss9:2
    (3.9Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00008116C5 RF00001 Escherichia
    coli
    K-12
    83333    		 34903725 Assembly1
    rna:1:1~2903 78~81,89,97,99~101
    10299 7ss9:3
    (3.9Å)
    		 1539 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DDC0 RF00177
    RF01959
    RF01960    		 Escherichia
    coli
    K-12
    83333    		 34903725 Assembly1
    rna:1:1~2903 702,783~784,899,1407~1409,1418
    ,1429,1473~1474,1483~1485,1491
    ~1492,1494,1496,1517
    rna:6:1~76 966,1229,1338~1341
    rna:4:5~24 1397,1401~1402,1498,1539
    rna:5:1~76 790,966,1400
    10300 7ss9:4
    (3.9Å)
    		 20 N/A N/A N/A Escherichia
    coli
    K-12
    83333    		 34903725 Assembly1
    rna:3:2~1540 7,19~21,24
    rna:6:1~76 16~18
    rna:5:1~76 19~21
    << < 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 > >>
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    Reference:
  • Chengxin Zhang, Lydia Freddolino (2024) "FURNA: a database for function annotations of RNA structures," PLOS Biology 22(7): e3002476.