SEQ2FUN

FURNA
Download all results in tab-seperated text for 14210 RNAs.
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  • Hover over Ligand to view the name of the ligand and the ligand-binding nucleotides on the RNA.

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    # PDB
    (Resolution)    		 Length EC number
    & GO term     		RNAcentral Rfam Taxon PubMed ATtRACT
    motif     		Ligand &
    binding nucleotides
    10401 7syx:z
    (3.7Å)
    		 188 GO:0043022 (F) ribosome binding URS00023359E0 RF00061 Hepatitis
    C
    virus
    (isolate
    1)
    11104    		 35822879 Assembly1
    rna:2:1~1869 136,265~268,270~271,295~296,33
    8~344,347~349
    rna:i:1~75 342~344
    10402 7tj2:G
    (3.2Å)
    		 31 N/A URS0000CBFF1E N/A synthetic
    construct
    32630    		 35801916
    35262076    		 Assembly1
    rna:H:17~47 6~23,25~36
    10403 7tj2:H
    (3.2Å)
    		 31 N/A URS0000CBFF4E N/A synthetic
    construct
    32630    		 35801916
    35262076    		 Assembly1
    rna:G:6~36 17~47
    10404 7tm3:K
    (3.25Å)
    		 3543 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000A7632C RF02543 Oryctolagus
    cuniculus
    9986    		 36261528 Assembly1
    rna:q:1~76 3769~3771,3910,4196~4198,4396~
    4397,4548
    rna:u:1~120 1736~1739,1741,1792,1794~1796,
    1894,1909,1936,1942
    rna:v:1~156 1~22,58,146~147,339,341~348,35
    0~353,355~357,360,362,379~380,
    415~430,1304~1305,1333~1334,13
    71,2308~2309,2313,2332~2334,23
    55,2444,2472,2508,2542,2544,27
    78~2779,3890
    10405 7tm3:q
    (3.25Å)
    		 76 GO:0030533 (F) triplet codon-amino aci... URS0002617744 RF00005 Oryctolagus
    cuniculus
    9986    		 36261528 Assembly1
    rna:K:1~5069 12~13,25,74~76
    10406 7tm3:u
    (3.25Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000002B0D5 RF00001 Oryctolagus
    cuniculus
    9986    		 36261528 Assembly1
    rna:K:1~5069 77~80,84,88,98,100~104
    10407 7tm3:v
    (3.25Å)
    		 156 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B2C76 RF00002
    RF02540    		 Oryctolagus
    cuniculus
    9986    		 36261528 Assembly1
    rna:K:1~5069 3~22,24~37,40~41,53~54,103,108
    ,111~113,115,126,128,136,138~1
    49,151~156
    10408 7tnx:B
    (3.54Å)
    		 12 N/A URS0002617748 N/A Homo
    sapiens
    9606    		 36272408 Assembly1
    rna:C:13~24 1~12
    10409 7tnx:C
    (3.54Å)
    		 12 N/A URS0002617750 N/A Homo
    sapiens
    9606    		 36272408 Assembly1
    rna:B:1~12 14~24
    10410 7tny:B
    (3.2Å)
    		 12 N/A URS0002617749 N/A Homo
    sapiens
    9606    		 36272408 Assembly1
    rna:C:13~24 1~12
    10411 7tny:C
    (3.2Å)
    		 12 N/A URS0002617749 N/A Homo
    sapiens
    9606    		 36272408 Assembly1
    rna:B:1~12 14~24
    10412 7tnz:B
    (3.54Å)
    		 12 N/A URS000261774F N/A Homo
    sapiens
    9606    		 36272408 Assembly1
    rna:C:13~24 1~12
    10413 7tnz:C
    (3.54Å)
    		 12 N/A URS000261774F N/A Homo
    sapiens
    9606    		 36272408 Assembly1
    rna:B:1~12 13~24
    10414 7to0:B
    (3.5Å)
    		 12 N/A URS0002617749 N/A Homo
    sapiens
    9606    		 36272408 Assembly1
    rna:C:13~24 1~9,11~12
    10415 7to0:C
    (3.5Å)
    		 12 N/A URS0002617749 N/A Homo
    sapiens
    9606    		 36272408 Assembly1
    rna:B:1~12 13~24
    10416 7too:A25S
    (2.7Å)
    		 3194 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000061F377 RF02540
    RF02543    		 Saccharomyces
    cerevisiae
    4932    		 35589706
    M107_0.6

    M080_0.6

    M299_0.6

    16    		 Assembly1
    rna:A58S:1~158 3~23,59,330~337,339~342,345~34
    6,349,351,368~369,404~419,656~
    657,691,1394~1395,1398~1399,14
    19~1420,1441,1530,1558,1584,16
    18~1619,1830~1832,2386,2585,29
    94~2995
    rna:A5S:1~121 996~998,1052,1054~1055,1171,11
    97,1203
    rna:APTN:1~76 2210~2211,2235~2236,2453~2454,
    2484,2764,2793~2794
    10417 7too:A58S
    (2.7Å)
    		 158 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001BF64E RF00002 Saccharomyces
    cerevisiae
    4932    		 35589706
    441    		 Assembly1
    rna:A25S:3~3396 1~22,24~33,35~37,40~41,53~54,1
    04,109,112~115,125~126,129,137
    ~157
    10418 7too:A5S
    (2.7Å)
    		 121 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000055688D RF00001 Saccharomyces
    cerevisiae
    4932    		 35589706 Assembly1
    rna:A25S:3~3396 79~81,86,90,100,102~103
    10419 7too:APTN
    (2.7Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    562    		 35589706 Assembly1
    rna:A25S:3~3396 3~4,18~19,56,70~71,76
    10420 7top:A25S
    (2.4Å)
    		 3194 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000061F377 RF02540
    RF02543    		 Saccharomyces
    cerevisiae
    4932    		 35589706
    M107_0.6

    M080_0.6

    M299_0.6

    16    		 Assembly1
    rna:A58S:1~158 3~23,59,143,330~337,339~342,34
    5~346,349,351,368~369,404~419,
    656~657,691,1394~1395,1398~139
    9,1418~1420,1441~1442,1530,155
    8,1584~1585,1618~1619,1830~183
    2,2386,2585,2994~2995
    rna:A5S:1~121 996~999,1052,1054~1056,1156,11
    71,1197,1203
    rna:APTN:1~76 2210~2211,2235~2236,2453~2454,
    2484,2764,2793~2794
    10421 7top:A58S
    (2.4Å)
    		 158 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001BF64E RF00002 Saccharomyces
    cerevisiae
    4932    		 35589706
    441    		 Assembly1
    rna:A25S:3~3396 1~22,24~33,35~37,40~41,53~54,1
    04,109,112~115,126,129,136~157
    10422 7top:A5S
    (2.4Å)
    		 121 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000055688D RF00001 Saccharomyces
    cerevisiae
    4932    		 35589706 Assembly1
    rna:A25S:3~3396 79~82,86,90,100,102~104
    10423 7top:APTN
    (2.4Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    562    		 35589706 Assembly1
    rna:A25S:3~3396 3~4,19,56,70~71,76
    10424 7toq:A18S
    (3.1Å)
    		 1690 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000EEACE6 RF01960
    RF01959
    RF00177    		 Oryctolagus
    cuniculus
    9986    		 35589706 Assembly1
    rna:A25S:1~5069 677,970,1028~1030,1708~1710,17
    19~1721,1731,1815~1816,1825~18
    28,1849
    rna:MRNA:2~11 961,1207,1698,1701,1704,1825,1
    830,1837
    rna:PTRN:1~76 1058,1248,1524~1525,1639~1642,
    1701
    10425 7toq:A25S
    (3.1Å)
    		 3649 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00023359A5 RF02540
    RF02543    		 Oryctolagus
    cuniculus
    9986    		 35589706 Assembly1
    rna:A18S:1~1869 1563~1565,2884,3629,3710,3759~
    3760,3762~3763,3766~3767,3794~
    3796,3806~3807
    rna:A58S:1~156 1~22,58,146,339,341~348,350~35
    3,356~357,360,362,379~380,415~
    430,1304~1305,1333~1334,1371,2
    308~2309,2312~2313,2333,2355,2
    444,2472,2487,2493,2508~2509,2
    542~2544,2778~2779
    rna:A5S:1~120 1736~1738,1741,1792~1796,1908~
    1909,1936,1942
    rna:PTRN:1~76 3714~3715,3738~3740,4046,4341~
    4342,4370~4371
    10426 7toq:A58S
    (3.1Å)
    		 156 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B2C76 RF00002 Oryctolagus
    cuniculus
    9986    		 35589706 Assembly1
    rna:A25S:1~5069 4~22,24~37,40~41,53~54,103,108
    ,110,112~113,115,125~128,136,1
    38~149,151~156
    10427 7toq:A5S
    (3.1Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000002B0D5 RF00001 Oryctolagus
    cuniculus
    9986    		 35589706 Assembly1
    rna:A25S:1~5069 77~80,84,88,98,100~101,103~104
    10428 7toq:MRNA
    (3.1Å)
    		 10 N/A URS00023359A7 N/A Saccharomyces
    cerevisiae
    4932    		 35589706 Assembly1
    rna:A18S:1~1869 2,4~7,9,11
    rna:PTRN:1~76 5,7
    10429 7toq:PTRN
    (3.1Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    K-12
    83333    		 35589706 Assembly1
    rna:A18S:1~1869 30~32,34,38,40~42
    rna:A25S:1~5069 3,56,70~72,75~76
    rna:MRNA:2~11 34~37
    10430 7tor:A18S
    (2.9Å)
    		 1691 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000EEACFB RF01960
    RF01959
    RF00177    		 Oryctolagus
    cuniculus
    9986    		 35589706 Assembly1
    rna:A28S:1~5069 677~678,970,1028~1030,1180,170
    8~1710,1721,1731,1815~1816,182
    6~1827,1849
    rna:MRNA:2~11 961,1207,1698,1701,1830
    rna:PTRN:1~73 1058,1248,1524,1639~1641,1701
    10431 7tor:A28S
    (2.9Å)
    		 3552 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00023359A6 RF02540
    RF02543    		 Oryctolagus
    cuniculus
    9986    		 35589706 Assembly1
    rna:A18S:1~1869 1563~1565,2884,3629,3709,3712,
    3759~3760,3763,3767,3794~3795,
    3806~3807
    rna:A58S:1~156 1~22,58,146~147,339,341~348,35
    0~353,355~357,360,362,379,415~
    430,1304~1305,1333~1334,1371,2
    308~2309,2312~2313,2333~2334,2
    444,2472,2486~2487,2508,2543~2
    544,2778~2779,3890
    rna:A5S:1~120 1736~1739,1741,1792~1795,1894,
    1908~1909,1936,1942
    rna:ETRN:1~76 3714~3715,3740,3958,4046,4341~
    4342,4370~4371
    rna:PTRN:1~73 3769~3770
    10432 7tor:A58S
    (2.9Å)
    		 151 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000D56C3A RF00002 Oryctolagus
    cuniculus
    9986    		 35589706 Assembly1
    rna:A28S:1~5069 3~22,24~37,40~41,53~54,103,108
    ,110,112~113,115,125~127,135,1
    38~149,151~156
    10433 7tor:A5S
    (2.9Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000002B0D5 RF00001 Oryctolagus
    cuniculus
    9986    		 35589706 Assembly1
    rna:A28S:1~5069 77~79,84,88,98,100~103
    10434 7tor:ETRN
    (2.9Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    K-12
    83333    		 35589706 Assembly1
    rna:A28S:1~5069 4,19,56,70~71,75~76
    10435 7tor:MRNA
    (2.9Å)
    		 10 N/A URS00023359A7 N/A Saccharomyces
    cerevisiae
    4932    		 35589706 Assembly1
    rna:A18S:1~1869 2,4~7,10~11
    rna:PTRN:1~73 5~7
    10436 7tor:PTRN
    (2.9Å)
    		 74 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    K-12
    83333    		 35589706 Assembly1
    rna:A18S:1~1869 30~32,34,38~41
    rna:A28S:1~5069 12,25
    rna:MRNA:2~11 34~37
    10437 7tos:16S
    (2.9Å)
    		 1532 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DDC0 RF00177
    RF01959
    RF01960    		 Escherichia
    coli
    562    		 35589706 Assembly1
    rna:23S:1~2903 702,784,899,1407~1409,1418,142
    8~1429,1473~1475,1483~1484,149
    2,1494~1496,1517
    10438 7tos:23S
    (2.9Å)
    		 2903 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000BC4674 RF02540
    RF02541    		 Escherichia
    coli
    562    		 35589706 Assembly1
    rna:16S:2~1533 1689,1700~1704,1831~1832,1837,
    1846,1848,1912~1916,1919~1920,
    1947~1948,1959~1961
    rna:5S:1~120 861~863,915~919,958~959
    10439 7tos:5S
    (2.9Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00008116C5 RF00001 Escherichia
    coli
    562    		 35589706 Assembly1
    rna:23S:1~2903 78~81,89~90,96~97,99~100
    10440 7tql:2
    (3.2Å)
    		 1656 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00023358E1 RF01960
    RF01959
    RF00177    		 Homo
    sapiens
    9606    		 35732735
    1303

    1263

    872

    1149

    1267

    764

    43

    692

    1079

    1075

    1072

    1073

    819

    346

    546

    1378

    930

    936

    935

    M296_0.6

    1314

    M141_0.6

    1068

    s72

    M147_0.6

    1060

    s102

    1386

    M016_0.6

    s48

    926

    822

    1128

    1323

    988

    595

    1327

    707

    986

    796

    836

    762

    790

    838

    1124

    1017

    1393

    1392

    1390

    1236

    1335

    779

    M109_0.6

    1238

    M273_0.6

    445

    s99

    1311

    902

    900

    821

    788

    1333

    924

    s96

    M074_0.6

    335

    60

    1167

    977

    976

    974

    970

    509

    1037

    1035

    1213

    756

    639

    M148_0.6

    786

    1355

    M065_0.6

    M070_0.6

    813

    M050_0.6

    1188

    1187

    815

    727

    722

    883

    604

    606

    884

    749

    608

    M037_0.6

    1055

    878

    1059

    952

    1195

    954

    870

    1380

    325

    758

    770

    610

    1274

    1042

    M127_0.6

    s24

    804    		 Assembly1
    rna:3:1~75 1058,1248,1524,1639~1642,1701
    10441 7tql:3
    (3.2Å)
    		 75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS0000326EAC RF00005 Homo
    sapiens
    9606    		 35732735
    M352_0.6

    1235

    s46

    1075    		 Assembly1
    rna:2:1~1869 29~31,33,37~40
    10442 7tqv:G
    (3.43Å)
    		 33 N/A URS0000CBFF1E N/A synthetic
    construct
    32630    		 35801916
    35262076    		 Assembly1
    rna:H:17~49 4~23,25~36
    10443 7tqv:H
    (3.43Å)
    		 33 N/A URS0000CBFF4E N/A synthetic
    construct
    32630    		 35801916
    35262076    		 Assembly1
    rna:G:4~36 17~28,30~49
    10444 7ttu:1
    (3.0Å)
    		 2684 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00000AF0B7 RF02540
    RF02541
    RF00002    		 Staphylococcus
    aureus
    1280    		 35736238 Assembly1
    rna:2:2~112 906~908,962~963
    10445 7ttu:2
    (3.0Å)
    		 111 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00023359D0 RF00001 Staphylococcus
    aureus
    1280    		 35736238 Assembly1
    rna:1:4~2920 76~79,92,95
    10446 7ttw:1
    (2.9Å)
    		 2690 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00000AF0B7 RF02540
    RF02541
    RF00002    		 Staphylococcus
    aureus
    1280    		 35736238 Assembly1
    rna:2:2~112 906~908,962~963
    10447 7ttw:2
    (2.9Å)
    		 111 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00023359D0 RF00001 Staphylococcus
    aureus
    1280    		 35736238 Assembly1
    rna:1:4~2920 76~78,92,95
    10448 7tut:K
    (3.88Å)
    		 3543 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000A7632C RF02543 Oryctolagus
    cuniculus
    9986    		 36261528 Assembly1
    rna:q:1~76 3770~3771,4196~4198,4396~4397,
    4548
    rna:u:1~120 1736~1738,1792,1794~1796,1894,
    1909,1936,1942
    rna:v:1~156 1~22,58,146~147,339,341~348,35
    0~353,356~357,360,362,379~380,
    415~430,1304~1305,1333~1334,13
    71,2308~2309,2313,2333,2355,24
    44,2472,2486,2508~2509,2544,27
    78~2779,4162
    10449 7tut:q
    (3.88Å)
    		 76 GO:0030533 (F) triplet codon-amino aci... URS0002617744 RF00005 Oryctolagus
    cuniculus
    9986    		 36261528 Assembly1
    rna:K:1~5069 12~13,74~76
    10450 7tut:u
    (3.88Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000002B0D5 RF00001 Oryctolagus
    cuniculus
    9986    		 36261528 Assembly1
    rna:K:1~5069 77~80,84,88,98,100~101
    10451 7tut:v
    (3.88Å)
    		 156 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B2C76 RF00002
    RF02540    		 Oryctolagus
    cuniculus
    9986    		 36261528 Assembly1
    rna:K:1~5069 3~22,24~37,40,53~54,103,108,11
    2~113,115,125~126,136,138~156
    10452 7tzr:X
    (2.7Å)
    		 80 GO:0030976 (F) thiamine pyrophosphate ... URS000080DDEB RF00059 Escherichia
    coli
    562    		 35561226 Assembly1
    rna:Y:10~89 29~31
    10453 7tzr:Y
    (2.7Å)
    		 80 GO:0030976 (F) thiamine pyrophosphate ... URS000080DDEB RF00059 Escherichia
    coli
    562    		 35561226 Assembly1
    rna:X:10~89 29~31
    10454 7tzs:X
    (2.21Å)
    		 80 GO:0030976 (F) thiamine pyrophosphate ... URS000080DDEB RF00059 Escherichia
    coli
    562    		 35561226 Assembly1
    rna:Y:10~89 29~31
    10455 7tzs:Y
    (2.21Å)
    		 80 GO:0030976 (F) thiamine pyrophosphate ... URS000080DDEB RF00059 Escherichia
    coli
    562    		 35561226 Assembly1
    rna:X:10~89 29~31
    10456 7u0h:1
    (2.76Å)
    		 2722 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000061F377 RF02543 Saccharomyces
    cerevisiae
    BY4741
    1247190    		 36482249 Assembly1
    rna:2:1~158 1,3~23,59,143,330~337,339~342,
    345~346,349,351,368~369,404~41
    9,656~657,691,1394~1395,1398~1
    399,1418~1420,1441,1530,1558,1
    618~1620,1830~1832,2386,2994~2
    995
    rna:6:1~232 1,3~4,1570
    10457 7u0h:2
    (2.76Å)
    		 158 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001BF64E RF00002 Saccharomyces
    cerevisiae
    BY4741
    1247190    		 36482249 Assembly1
    rna:1:1~3396 1~22,24~33,35~37,40~41,53,104,
    114~115,128~129,136~150,152~15
    7
    10458 7u0h:6
    (2.76Å)
    		 59 N/A URS000261775E N/A Saccharomyces
    cerevisiae
    BY4741
    1247190    		 36482249 Assembly1
    rna:1:1~3396 229,232
    rna:2:1~158 1,230
    10459 7u2h:1A
    (2.55Å)
    		 2871 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001698E8 RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    HB8
    300852    		 35766409 Assembly1
    rna:1B:1~120 861~864,915,917~919,958
    rna:1a:4~1533 1689,1700~1704,1832,1836~1837,
    1846,1848,1912~1913,1915~1916,
    1919~1920,1947~1948,1959~1961,
    2863~2864
    rna:1w:1~76 882,896~897,1913,1942,2482~248
    3,2506~2507,2553~2555,2583~258
    5,2602
    rna:1x:1~76 1907~1909,1922~1924,2251~2253,
    2439,2450~2451,2585,2601~2602
    rna:1y:1~76 1885,2112,2169,2394~2395,2421~
    2422,2432
    10460 7u2h:1B
    (2.55Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DEE8 RF00001 Thermus
    thermophilus
    HB8
    300852    		 35766409 Assembly1
    rna:1A:6~2897 78~81,90,98,100~102
    10461 7u2h:1a
    (2.55Å)
    		 1500 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DFED RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 35766409 Assembly1
    rna:1A:6~2897 702,783~784,899,1407~1409,1418
    ,1429,1442A,1473~1475,1483~148
    4,1494~1496,1517
    rna:1v:12~24 530,926,1196,1397,1400~1401,14
    92~1493,1498,1503,1505,1507
    rna:1w:1~76 530,1054,1493
    rna:1x:1~76 790,966,1229~1230,1338~1340,14
    00
    10462 7u2h:1v
    (2.55Å)
    		 13 N/A N/A N/A Tequatrovirus
    T4
    10665    		 35766409 Assembly1
    rna:1a:4~1533 12~13,15~20,22~24
    rna:1w:1~76 19~21
    rna:1x:1~76 16~18
    10463 7u2h:1w
    (2.55Å)
    		 73 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00003845FE RF00005 Escherichia
    coli
    562    		 35766409 Assembly1
    rna:1A:6~2897 18,37~38,55~56,64,71,74~76
    rna:1a:4~1533 34~37
    rna:1v:12~24 34~37
    10464 7u2h:1x
    (2.55Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    562    		 35766409 Assembly1
    rna:1A:6~2897 11~13,24~25,74~76
    rna:1a:4~1533 29~32,34,38~41
    rna:1v:12~24 34~37
    10465 7u2h:1y
    (2.55Å)
    		 73 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00003845FE RF00005 Escherichia
    coli
    562    		 35766409 Assembly1
    rna:1A:6~2897 4,18,56,76
    10466 7u2h:2A
    (2.55Å)
    		 2800 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001698E8 RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    HB8
    300852    		 35766409 Assembly2
    rna:2B:1~120 861~864,915,917~919,958
    rna:2a:4~1532 1689,1700,1702~1704,1832,1836~
    1837,1846,1848,1912~1916,1919~
    1920,1947~1949,1959~1960,2864
    rna:2w:1~76 882,896~897,1913,2482~2483,250
    6~2507,2553~2555,2583~2585,260
    2
    rna:2x:1~76 1907~1909,1922~1924,2251~2253,
    2439,2450~2451,2585,2601~2602
    rna:2y:1~76 1851,1885,2112,2169,2394~2395,
    2421~2422,2432
    10467 7u2h:2B
    (2.55Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DEE8 RF00001 Thermus
    thermophilus
    HB8
    300852    		 35766409 Assembly2
    rna:2A:6~2897 78~81,90,97~98,100~101
    10468 7u2h:2a
    (2.55Å)
    		 1503 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DFED RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 35766409 Assembly2
    rna:2A:6~2897 702,783~784,899,1407~1410,1418
    ,1429~1430,1442A,1473~1475,148
    3~1484,1493~1496,1517
    rna:2v:12~24 530,926,1196,1397,1400~1402,14
    92~1493,1498,1503,1505~1507
    rna:2w:1~76 530,1054,1493
    rna:2x:1~76 790,966,1229~1230,1338~1340,14
    00
    10469 7u2h:2v
    (2.55Å)
    		 13 N/A N/A N/A Tequatrovirus
    T4
    10665    		 35766409 Assembly2
    rna:2a:4~1532 13,15~20,22~24
    rna:2w:1~76 19~21
    rna:2x:1~76 16~18
    10470 7u2h:2w
    (2.55Å)
    		 72 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00003845FE RF00005 Escherichia
    coli
    562    		 35766409 Assembly2
    rna:2A:6~2897 18,37~38,56,64,74~76
    rna:2a:4~1532 34~37
    rna:2v:12~24 34~37
    10471 7u2h:2x
    (2.55Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    562    		 35766409 Assembly2
    rna:2A:6~2897 11~13,24~25,74~76
    rna:2a:4~1532 30~32,34,38~41
    rna:2v:12~24 34~37
    10472 7u2h:2y
    (2.55Å)
    		 73 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00003845FE RF00005 Escherichia
    coli
    562    		 35766409 Assembly2
    rna:2A:6~2897 3,18,56,71~72,76
    rna:2a:4~1532 37~38
    rna:2x:1~76 35~36
    10473 7u2i:1A
    (2.55Å)
    		 2871 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001698E8 RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    HB8
    300852    		 35766409 Assembly1
    rna:1B:1~120 861~864,915,917~919,958
    rna:1a:4~1533 1689,1700~1704,1832,1836~1837,
    1846,1848,1912~1916,1919~1920,
    1947~1949,1959~1961,2863~2864
    rna:1w:1~76 882~883,896~897,1913,1942,2482
    ~2483,2506~2507,2553~2555,2583
    ~2585,2602
    rna:1x:1~76 1907~1909,1922~1924,2251~2253,
    2439,2450~2451,2585,2601~2602
    rna:1y:1~76 1851,2112,2169,2394~2395,2421~
    2422,2432
    10474 7u2i:1B
    (2.55Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DEE8 RF00001 Thermus
    thermophilus
    HB8
    300852    		 35766409 Assembly1
    rna:1A:6~2897 78~81,90,98,100~102
    10475 7u2i:1a
    (2.55Å)
    		 1500 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DFED RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 35766409 Assembly1
    rna:1A:6~2897 702,783~784,899~900,1407~1409,
    1418,1429,1442A,1473~1475,1483
    ~1484,1494~1496,1517
    rna:1v:12~24 530,926,1196,1397,1400~1402,14
    92~1493,1498,1503,1505,1507
    rna:1w:1~76 530,1054,1493
    rna:1x:1~76 790,966,1229~1230,1338~1341,14
    00
    10476 7u2i:1v
    (2.55Å)
    		 13 N/A N/A N/A Tequatrovirus
    T4
    10665    		 35766409 Assembly1
    rna:1a:4~1533 12~13,15~20,22~24
    rna:1w:1~76 19~21
    rna:1x:1~76 16~18
    10477 7u2i:1w
    (2.55Å)
    		 73 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00003845FE RF00005 Escherichia
    coli
    562    		 35766409 Assembly1
    rna:1A:6~2897 18,37~38,55~56,64,71,74~76
    rna:1a:4~1533 34~37
    rna:1v:12~24 34~37
    10478 7u2i:1x
    (2.55Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    562    		 35766409 Assembly1
    rna:1A:6~2897 11~13,24~25,74~76
    rna:1a:4~1533 30~32,34,38~41
    rna:1v:12~24 34~37
    10479 7u2i:1y
    (2.55Å)
    		 73 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00003845FE RF00005 Escherichia
    coli
    562    		 35766409 Assembly1
    rna:1A:6~2897 18,56,71,76
    10480 7u2i:2A
    (2.55Å)
    		 2800 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001698E8 RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    HB8
    300852    		 35766409 Assembly2
    rna:2B:1~120 861~864,917~919,958
    rna:2a:4~1532 1700~1704,1832,1836~1837,1846,
    1848,1912~1916,1919~1920,1947~
    1948,1959~1960,2864
    rna:2w:1~76 882,897,1913,1942,2482,2506~25
    07,2553~2555,2583~2585,2602
    rna:2x:1~76 1907~1909,1922~1924,2251~2253,
    2439,2450~2451,2585,2601~2602
    rna:2y:1~76 1851,1885,2112,2169,2394~2395,
    2421~2422
    10481 7u2i:2B
    (2.55Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DEE8 RF00001 Thermus
    thermophilus
    HB8
    300852    		 35766409 Assembly2
    rna:2A:6~2897 78~81,90,97~98,100~102
    10482 7u2i:2a
    (2.55Å)
    		 1503 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DFED RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 35766409 Assembly2
    rna:2A:6~2897 702,783~784,899,1407~1409,1418
    ,1429~1430,1442A,1473~1475,148
    3~1484,1493~1496,1517
    rna:2v:12~24 530,926,1196,1397,1400~1402,14
    92~1493,1498,1503,1505~1507
    rna:2w:1~76 530,1054,1493
    rna:2x:1~76 790,966,1229~1230,1338~1340,14
    00
    rna:2y:1~76 693,695
    10483 7u2i:2v
    (2.55Å)
    		 13 N/A N/A N/A Tequatrovirus
    T4
    10665    		 35766409 Assembly2
    rna:2a:4~1532 13,15~20,22~24
    rna:2w:1~76 19~21
    rna:2x:1~76 16~18
    10484 7u2i:2w
    (2.55Å)
    		 72 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00003845FE RF00005 Escherichia
    coli
    562    		 35766409 Assembly2
    rna:2A:6~2897 18,37~38,56,64,72,74~76
    rna:2a:4~1532 34~37
    rna:2v:12~24 34~37
    10485 7u2i:2x
    (2.55Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    562    		 35766409 Assembly2
    rna:2A:6~2897 11~13,24~25,74~76
    rna:2a:4~1532 30~31,34,38~41
    rna:2v:12~24 34~37
    10486 7u2i:2y
    (2.55Å)
    		 73 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00003845FE RF00005 Escherichia
    coli
    562    		 35766409 Assembly2
    rna:2A:6~2897 3,18,56,71~72,76
    rna:2a:4~1532 37~38
    rna:2x:1~76 35~36
    10487 7u2j:1A
    (2.55Å)
    		 2871 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001698E8 RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    HB8
    300852    		 35766409 Assembly1
    rna:1B:1~120 861~863,915,917~919,958
    rna:1a:4~1533 1689,1700~1704,1832,1836~1837,
    1846,1848,1912~1916,1919~1920,
    1947~1949,1959~1961,2863~2864
    rna:1w:1~76 882,896~897,1913,1942,2482~248
    3,2506~2507,2553~2555,2583~258
    5,2602
    rna:1x:1~76 1907~1909,1922~1924,2251~2253,
    2439,2450~2451,2601~2602
    rna:1y:1~76 1885,2112,2169,2394~2395,2421~
    2422
    10488 7u2j:1B
    (2.55Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DEE8 RF00001 Thermus
    thermophilus
    HB8
    300852    		 35766409 Assembly1
    rna:1A:6~2897 78~81,90,97~98,100~101
    10489 7u2j:1a
    (2.55Å)
    		 1500 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DFED RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 35766409 Assembly1
    rna:1A:6~2897 702,783~784,899~900,1407~1409,
    1418,1429,1442A,1473~1475,1483
    ~1484,1494~1496,1517
    rna:1v:12~24 530,926,1196,1397,1400~1402,14
    92~1493,1498,1503,1505~1507
    rna:1w:1~76 530,1054,1493
    rna:1x:1~76 790,966,1229~1230,1338~1340,14
    00
    rna:1y:1~76 694,1340
    10490 7u2j:1v
    (2.55Å)
    		 13 N/A N/A N/A Tequatrovirus
    T4
    10665    		 35766409 Assembly1
    rna:1a:4~1533 12~13,15~24
    rna:1w:1~76 19~21
    rna:1x:1~76 16~18
    10491 7u2j:1w
    (2.55Å)
    		 73 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00003845FE RF00005 Escherichia
    coli
    562    		 35766409 Assembly1
    rna:1A:6~2897 18,37~38,55~56,64,74~76
    rna:1a:4~1533 34~37
    rna:1v:12~24 34~37
    10492 7u2j:1x
    (2.55Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    562    		 35766409 Assembly1
    rna:1A:6~2897 11~13,24~25,74~76
    rna:1a:4~1533 29~32,34,38~41
    rna:1v:12~24 34~37
    10493 7u2j:1y
    (2.55Å)
    		 73 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00003845FE RF00005 Escherichia
    coli
    562    		 35766409 Assembly1
    rna:1A:6~2897 3~4,18,56,76
    rna:1a:4~1533 35,38
    10494 7u2j:2A
    (2.55Å)
    		 2800 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001698E8 RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    HB8
    300852    		 35766409 Assembly2
    rna:2B:1~120 861~864,915,917~919,958
    rna:2a:4~1532 1689,1700~1704,1832,1836~1837,
    1846,1848,1912~1916,1919~1920,
    1947~1949,1959~1961,2863~2864
    rna:2w:1~76 896~897,1913,2482,2506~2507,25
    53~2555,2583~2585,2602
    rna:2x:1~76 1907~1909,1922~1924,2251~2253,
    2439,2450~2451,2601~2602
    rna:2y:1~76 1851,1885,2112,2169,2394~2395,
    2421~2422,2432
    10495 7u2j:2B
    (2.55Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DEE8 RF00001 Thermus
    thermophilus
    HB8
    300852    		 35766409 Assembly2
    rna:2A:6~2897 78~81,90,97~98,100~101
    10496 7u2j:2a
    (2.55Å)
    		 1503 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DFED RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 35766409 Assembly2
    rna:2A:6~2897 702,783~784,899~900,1407~1409,
    1418,1429~1430,1442A,1473~1475
    ,1483~1484,1493~1496,1517
    rna:2v:12~24 530,926,1196,1397,1400~1402,14
    92~1493,1498,1503,1505~1507
    rna:2w:1~76 530,1054,1493
    rna:2x:1~76 790,966,1229~1230,1338~1340,14
    00
    rna:2y:1~76 694~695
    10497 7u2j:2v
    (2.55Å)
    		 13 N/A N/A N/A Tequatrovirus
    T4
    10665    		 35766409 Assembly2
    rna:2a:4~1532 12~13,15~20,22~24
    rna:2w:1~76 19~21
    rna:2x:1~76 16~18
    10498 7u2j:2w
    (2.55Å)
    		 72 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00003845FE RF00005 Escherichia
    coli
    562    		 35766409 Assembly2
    rna:2A:6~2897 37~38,55~56,64,74~76
    rna:2a:4~1532 34~37
    rna:2v:12~24 34~37
    10499 7u2j:2x
    (2.55Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    562    		 35766409 Assembly2
    rna:2A:6~2897 11~13,24~25,74~76
    rna:2a:4~1532 30~32,34,38~41
    rna:2v:12~24 34~37
    10500 7u2j:2y
    (2.55Å)
    		 73 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00003845FE RF00005 Escherichia
    coli
    562    		 35766409 Assembly2
    rna:2A:6~2897 3,18,56,71,76
    rna:2a:4~1532 37~38
    rna:2x:1~76 35~36
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    Reference:
  • Chengxin Zhang, Lydia Freddolino (2024) "FURNA: a database for function annotations of RNA structures," PLOS Biology 22(7): e3002476.