SEQ2FUN

FURNA
Download all results in tab-seperated text for 16611 RNAs.
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  • Hover over Ligand to view the name of the ligand and the ligand-binding nucleotides on the RNA.

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    # PDB
    (Resolution)    		 Length EC number
    & GO term     		RNAcentral Rfam Taxon PubMed ATtRACT
    motif     		Ligand &
    binding nucleotides
    10401 7syr:z
    (3.6Å)
    		 188 GO:0043022 (F) ribosome binding URS00023359E0 RF00061 Hepatitis
    C
    virus
    (isolate
    1)
    11104    		 35822879 Assembly1
    rna:2:1~1869 136,265~268,270~272,295~296,33
    9~340,342~344,348~349
    rna:i:1~75 342~344
    10402 7sys:2
    (3.5Å)
    		 1697 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00023359E5 RF01960 Oryctolagus
    cuniculus
    9986    		 35822879 Assembly1
    rna:z:120~356 626,961,1057,1112~1119,1207,13
    31,1489,1698,1701~1702,1830
    rna:i:1~75 1058,1248,1524~1525,1639~1641,
    1701
    10403 7sys:i
    (3.5Å)
    		 75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS0000326EAC RF00005 Oryctolagus
    cuniculus
    9986    		 35822879 Assembly1
    rna:2:1~1869 29~30,33,37~40
    rna:z:120~356 33~36
    10404 7sys:z
    (3.5Å)
    		 188 GO:0043022 (F) ribosome binding URS00023359E0 RF00061 Hepatitis
    C
    virus
    (isolate
    1)
    11104    		 35822879 Assembly1
    rna:2:1~1869 136,265~268,270~272,295~296,29
    8~299,338~340,342~344,348~349
    rna:i:1~75 342~344
    10405 7syt:2
    (4.4Å)
    		 1697 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00023359E5 RF01960 Oryctolagus
    cuniculus
    9986    		 35822879 Assembly1
    rna:i:1~75 1248,1524~1525,1639~1641,1701
    rna:z:120~356 626,961,1057,1113~1119,1207,13
    31,1698,1701~1702,1830
    10406 7syt:i
    (4.4Å)
    		 75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS0000326EAC RF00005 Oryctolagus
    cuniculus
    9986    		 35822879 Assembly1
    rna:2:1~1869 28~30,33,39~40
    rna:z:120~356 33~36
    10407 7syt:z
    (4.4Å)
    		 188 GO:0043022 (F) ribosome binding URS00023359E0 RF00061 Hepatitis
    C
    virus
    (isolate
    1)
    11104    		 35822879 Assembly1
    rna:2:1~1869 136,265~268,270~272,295~296,33
    7~344,347~348
    rna:i:1~75 342~344
    10408 7syu:2
    (4.6Å)
    		 1697 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00023359E5 RF01960 Oryctolagus
    cuniculus
    9986    		 35822879 Assembly1
    rna:z:120~356 626,961,1057,1113~1119,1207,13
    31,1489,1698,1701~1702,1830,18
    37
    rna:i:1~75 1058,1248,1639~1641,1701
    10409 7syu:i
    (4.6Å)
    		 75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS0000326EAC RF00005 Oryctolagus
    cuniculus
    9986    		 35822879 Assembly1
    rna:2:1~1869 29~30,33,37~38,40
    rna:z:120~356 33~36
    10410 7syu:z
    (4.6Å)
    		 188 GO:0043022 (F) ribosome binding URS00023359E0 RF00061 Hepatitis
    C
    virus
    (isolate
    1)
    11104    		 35822879 Assembly1
    rna:2:1~1869 136,264~268,270~272,295~296,33
    8~345,347~349
    rna:i:1~75 342~344
    10411 7syv:2
    (3.9Å)
    		 1680 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00023359E5 RF01960 Oryctolagus
    cuniculus
    9986    		 35822879 Assembly1
    rna:i:1~75 1058,1701
    rna:z:44~350 961,1056,1113~1119,1207,1698,1
    701~1702,1704,1830
    10412 7syv:i
    (3.9Å)
    		 75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS0000326EAC RF00005 Oryctolagus
    cuniculus
    9986    		 35822879 Assembly1
    rna:2:1~1869 33,37
    rna:z:44~350 33~36
    10413 7syv:z
    (3.9Å)
    		 258 GO:0043022 (F) ribosome binding URS00023359E0 RF00061 hepatitis
    C
    virus
    genotype
    1a
    2847144    		 35822879 Assembly1
    rna:2:1~1869 83,136,265~268,270~271,295~296
    ,298,339~344,347~348
    rna:i:1~75 342~344
    10414 7syw:2
    (3.7Å)
    		 1697 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00023359E5 RF01960 Oryctolagus
    cuniculus
    9986    		 35822879 Assembly1
    rna:i:1~75 1058,1248,1524~1525,1639~1641,
    1701
    rna:z:120~356 626,961,1113~1119,1207,1489,16
    98,1701~1702,1830
    10415 7syw:i
    (3.7Å)
    		 75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS0000326EAC RF00005 Oryctolagus
    cuniculus
    9986    		 35822879 Assembly1
    rna:2:1~1869 29~30,33,37,39~40
    rna:z:120~356 33~36
    10416 7syw:z
    (3.7Å)
    		 188 GO:0043022 (F) ribosome binding URS00023359E0 RF00061 Hepatitis
    C
    virus
    (isolate
    1)
    11104    		 35822879 Assembly1
    rna:2:1~1869 136,265~268,270~271,295~296,29
    8,339~340,342~344,347~349
    rna:i:1~75 342~344
    10417 7syx:2
    (3.7Å)
    		 1697 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00023359E5 RF01960 Oryctolagus
    cuniculus
    9986    		 35822879 Assembly1
    rna:i:1~75 1058,1248,1524~1525,1639~1641,
    1701
    rna:z:120~356 626,961,1057,1113~1119,1207,14
    89,1698,1701~1702,1830
    10418 7syx:i
    (3.7Å)
    		 75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS0000326EAC RF00005 Oryctolagus
    cuniculus
    9986    		 35822879 Assembly1
    rna:2:1~1869 29~30,33,37,39~40
    rna:z:120~356 33~36
    10419 7syx:z
    (3.7Å)
    		 188 GO:0043022 (F) ribosome binding URS00023359E0 RF00061 Hepatitis
    C
    virus
    (isolate
    1)
    11104    		 35822879 Assembly1
    rna:2:1~1869 136,265~268,270~271,295~296,33
    8~344,347~349
    rna:i:1~75 342~344
    10420 7tj2:G
    (3.2Å)
    		 31 N/A URS0000CBFF1E N/A synthetic
    construct
    32630    		 35801916
    35262076    		 Assembly1
    rna:H:17~47 6~23,25~36
    10421 7tj2:H
    (3.2Å)
    		 31 N/A URS0000CBFF4E N/A synthetic
    construct
    32630    		 35801916
    35262076    		 Assembly1
    rna:G:6~36 17~47
    10422 7tm3:K
    (3.25Å)
    		 3543 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000A7632C RF02543 Oryctolagus
    cuniculus
    9986    		 36261528 Assembly1
    rna:q:1~76 3769~3771,3910,4196~4198,4396~
    4397,4548
    rna:u:1~120 1736~1739,1741,1792,1794~1796,
    1894,1909,1936,1942
    rna:v:1~156 1~22,58,146~147,339,341~348,35
    0~353,355~357,360,362,379~380,
    415~430,1304~1305,1333~1334,13
    71,2308~2309,2313,2332~2334,23
    55,2444,2472,2508,2542,2544,27
    78~2779,3890
    10423 7tm3:q
    (3.25Å)
    		 76 GO:0030533 (F) triplet codon-amino aci... URS0002617744 RF00005 Oryctolagus
    cuniculus
    9986    		 36261528 Assembly1
    rna:K:1~5069 12~13,25,74~76
    10424 7tm3:u
    (3.25Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000002B0D5 RF00001 Oryctolagus
    cuniculus
    9986    		 36261528 Assembly1
    rna:K:1~5069 77~80,84,88,98,100~104
    10425 7tm3:v
    (3.25Å)
    		 156 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B2C76 RF00002 Oryctolagus
    cuniculus
    9986    		 36261528 Assembly1
    rna:K:1~5069 3~22,24~37,40~41,53~54,103,108
    ,111~113,115,126,128,136,138~1
    49,151~156
    10426 7tnx:B
    (3.54Å)
    		 12 N/A URS0002617748 N/A Homo
    sapiens
    9606    		 36272408 Assembly1
    rna:C:13~24 1~12
    10427 7tnx:C
    (3.54Å)
    		 12 N/A URS0002617750 N/A Homo
    sapiens
    9606    		 36272408 Assembly1
    rna:B:1~12 14~24
    10428 7tny:B
    (3.2Å)
    		 12 N/A URS0002617749 N/A Homo
    sapiens
    9606    		 36272408 Assembly1
    rna:C:13~24 1~12
    10429 7tny:C
    (3.2Å)
    		 12 N/A URS0002617749 N/A Homo
    sapiens
    9606    		 36272408 Assembly1
    rna:B:1~12 14~24
    10430 7tnz:B
    (3.54Å)
    		 12 N/A URS000261774F N/A Homo
    sapiens
    9606    		 36272408 Assembly1
    rna:C:13~24 1~12
    10431 7tnz:C
    (3.54Å)
    		 12 N/A URS000261774F N/A Homo
    sapiens
    9606    		 36272408 Assembly1
    rna:B:1~12 13~24
    10432 7to0:B
    (3.5Å)
    		 12 N/A URS0002617749 N/A Homo
    sapiens
    9606    		 36272408 Assembly1
    rna:C:13~24 1~9,11~12
    10433 7to0:C
    (3.5Å)
    		 12 N/A URS0002617749 N/A Homo
    sapiens
    9606    		 36272408 Assembly1
    rna:B:1~12 13~24
    10434 7too:A25S
    (2.7Å)
    		 3194 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000061F377 RF02543 Saccharomyces
    cerevisiae
    4932    		 35589706
    M107_0.6

    M080_0.6

    M299_0.6

    16    		 Assembly1
    rna:A58S:1~158 3~23,59,330~337,339~342,345~34
    6,349,351,368~369,404~419,656~
    657,691,1394~1395,1398~1399,14
    19~1420,1441,1530,1558,1584,16
    18~1619,1830~1832,2386,2585,29
    94~2995
    rna:A5S:1~121 996~998,1052,1054~1055,1171,11
    97,1203
    rna:APTN:1~76 2210~2211,2235~2236,2453~2454,
    2484,2764,2793~2794
    10435 7too:A58S
    (2.7Å)
    		 158 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001BF64E RF00002 Saccharomyces
    cerevisiae
    4932    		 35589706
    441    		 Assembly1
    rna:A25S:3~3396 1~22,24~33,35~37,40~41,53~54,1
    04,109,112~115,125~126,129,137
    ~157
    10436 7too:A5S
    (2.7Å)
    		 121 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000055688D RF00001 Saccharomyces
    cerevisiae
    4932    		 35589706 Assembly1
    rna:A25S:3~3396 79~81,86,90,100,102~103
    10437 7too:APTN
    (2.7Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    562    		 35589706 Assembly1
    rna:A25S:3~3396 3~4,18~19,56,70~71,76
    10438 7top:A25S
    (2.4Å)
    		 3194 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000061F377 RF02543 Saccharomyces
    cerevisiae
    4932    		 35589706
    M107_0.6

    M080_0.6

    M299_0.6

    16    		 Assembly1
    rna:A58S:1~158 3~23,59,143,330~337,339~342,34
    5~346,349,351,368~369,404~419,
    656~657,691,1394~1395,1398~139
    9,1418~1420,1441~1442,1530,155
    8,1584~1585,1618~1619,1830~183
    2,2386,2585,2994~2995
    rna:A5S:1~121 996~999,1052,1054~1056,1156,11
    71,1197,1203
    rna:APTN:1~76 2210~2211,2235~2236,2453~2454,
    2484,2764,2793~2794
    10439 7top:A58S
    (2.4Å)
    		 158 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001BF64E RF00002 Saccharomyces
    cerevisiae
    4932    		 35589706
    441    		 Assembly1
    rna:A25S:3~3396 1~22,24~33,35~37,40~41,53~54,1
    04,109,112~115,126,129,136~157
    10440 7top:A5S
    (2.4Å)
    		 121 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000055688D RF00001 Saccharomyces
    cerevisiae
    4932    		 35589706 Assembly1
    rna:A25S:3~3396 79~82,86,90,100,102~104
    10441 7top:APTN
    (2.4Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    562    		 35589706 Assembly1
    rna:A25S:3~3396 3~4,19,56,70~71,76
    10442 7toq:A18S
    (3.1Å)
    		 1690 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000EEACE6 RF01960 Oryctolagus
    cuniculus
    9986    		 35589706 Assembly1
    rna:A25S:1~5069 677,970,1028~1030,1708~1710,17
    19~1721,1731,1815~1816,1825~18
    28,1849
    rna:MRNA:2~11 961,1207,1698,1701,1704,1825,1
    830,1837
    rna:PTRN:1~76 1058,1248,1524~1525,1639~1642,
    1701
    10443 7toq:A25S
    (3.1Å)
    		 3649 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00023359A5 RF02543 Oryctolagus
    cuniculus
    9986    		 35589706 Assembly1
    rna:A18S:1~1869 1563~1565,2884,3629,3710,3759~
    3760,3762~3763,3766~3767,3794~
    3796,3806~3807
    rna:A58S:1~156 1~22,58,146,339,341~348,350~35
    3,356~357,360,362,379~380,415~
    430,1304~1305,1333~1334,1371,2
    308~2309,2312~2313,2333,2355,2
    444,2472,2487,2493,2508~2509,2
    542~2544,2778~2779
    rna:A5S:1~120 1736~1738,1741,1792~1796,1908~
    1909,1936,1942
    rna:PTRN:1~76 3714~3715,3738~3740,4046,4341~
    4342,4370~4371
    10444 7toq:A58S
    (3.1Å)
    		 156 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B2C76 RF00002 Oryctolagus
    cuniculus
    9986    		 35589706 Assembly1
    rna:A25S:1~5069 4~22,24~37,40~41,53~54,103,108
    ,110,112~113,115,125~128,136,1
    38~149,151~156
    10445 7toq:A5S
    (3.1Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000002B0D5 RF00001 Oryctolagus
    cuniculus
    9986    		 35589706 Assembly1
    rna:A25S:1~5069 77~80,84,88,98,100~101,103~104
    10446 7toq:MRNA
    (3.1Å)
    		 10 N/A URS00023359A7 N/A Saccharomyces
    cerevisiae
    4932    		 35589706 Assembly1
    rna:A18S:1~1869 2,4~7,9,11
    rna:PTRN:1~76 5,7
    10447 7toq:PTRN
    (3.1Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    K-12
    83333    		 35589706 Assembly1
    rna:A18S:1~1869 30~32,34,38,40~42
    rna:A25S:1~5069 3,56,70~72,75~76
    rna:MRNA:2~11 34~37
    10448 7tor:A18S
    (2.9Å)
    		 1691 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000EEACFB RF01960 Oryctolagus
    cuniculus
    9986    		 35589706 Assembly1
    rna:A28S:1~5069 677~678,970,1028~1030,1180,170
    8~1710,1721,1731,1815~1816,182
    6~1827,1849
    rna:MRNA:2~11 961,1207,1698,1701,1830
    rna:PTRN:1~73 1058,1248,1524,1639~1641,1701
    10449 7tor:A28S
    (2.9Å)
    		 3552 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00023359A6 RF02543 Oryctolagus
    cuniculus
    9986    		 35589706 Assembly1
    rna:A18S:1~1869 1563~1565,2884,3629,3709,3712,
    3759~3760,3763,3767,3794~3795,
    3806~3807
    rna:A58S:1~156 1~22,58,146~147,339,341~348,35
    0~353,355~357,360,362,379,415~
    430,1304~1305,1333~1334,1371,2
    308~2309,2312~2313,2333~2334,2
    444,2472,2486~2487,2508,2543~2
    544,2778~2779,3890
    rna:A5S:1~120 1736~1739,1741,1792~1795,1894,
    1908~1909,1936,1942
    rna:ETRN:1~76 3714~3715,3740,3958,4046,4341~
    4342,4370~4371
    rna:PTRN:1~73 3769~3770
    10450 7tor:A58S
    (2.9Å)
    		 151 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000D56C3A RF00002 Oryctolagus
    cuniculus
    9986    		 35589706 Assembly1
    rna:A28S:1~5069 3~22,24~37,40~41,53~54,103,108
    ,110,112~113,115,125~127,135,1
    38~149,151~156
    10451 7tor:A5S
    (2.9Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000002B0D5 RF00001 Oryctolagus
    cuniculus
    9986    		 35589706 Assembly1
    rna:A28S:1~5069 77~79,84,88,98,100~103
    10452 7tor:ETRN
    (2.9Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    K-12
    83333    		 35589706 Assembly1
    rna:A28S:1~5069 4,19,56,70~71,75~76
    10453 7tor:MRNA
    (2.9Å)
    		 10 N/A URS00023359A7 N/A Saccharomyces
    cerevisiae
    4932    		 35589706 Assembly1
    rna:A18S:1~1869 2,4~7,10~11
    rna:PTRN:1~73 5~7
    10454 7tor:PTRN
    (2.9Å)
    		 74 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    K-12
    83333    		 35589706 Assembly1
    rna:A18S:1~1869 30~32,34,38~41
    rna:A28S:1~5069 12,25
    rna:MRNA:2~11 34~37
    10455 7tos:16S
    (2.9Å)
    		 1532 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DDC0 RF00177 Escherichia
    coli
    562    		 35589706 Assembly1
    rna:23S:1~2903 702,784,899,1407~1409,1418,142
    8~1429,1473~1475,1483~1484,149
    2,1494~1496,1517
    10456 7tos:23S
    (2.9Å)
    		 2903 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000BC4674 RF02541 Escherichia
    coli
    562    		 35589706 Assembly1
    rna:16S:2~1533 1689,1700~1704,1831~1832,1837,
    1846,1848,1912~1916,1919~1920,
    1947~1948,1959~1961
    rna:5S:1~120 861~863,915~919,958~959
    10457 7tos:5S
    (2.9Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00008116C5 RF00001 Escherichia
    coli
    562    		 35589706 Assembly1
    rna:23S:1~2903 78~81,89~90,96~97,99~100
    10458 7tql:2
    (3.2Å)
    		 1656 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00023358E1 RF01960 Homo
    sapiens
    9606    		 35732735
    1303

    1263

    872

    1149

    1267

    764

    43

    692

    1079

    1075

    1072

    1073

    819

    346

    546

    1378

    930

    936

    935

    M296_0.6

    1314

    M141_0.6

    1068

    s72

    M147_0.6

    1060

    s102

    1386

    M016_0.6

    821

    926

    822

    1128

    1323

    988

    595

    1327

    707

    986

    796

    836

    762

    790

    838

    1124

    1017

    1393

    1392

    1390

    1236

    1335

    779

    M109_0.6

    1238

    M273_0.6

    s96

    s99

    1311

    902

    900

    s48

    788

    445

    924

    M074_0.6

    335

    60

    1167

    977

    976

    974

    970

    509

    1037

    1035

    1213

    756

    639

    M148_0.6

    786

    1355

    M065_0.6

    M070_0.6

    813

    M050_0.6

    1188

    1333

    1187

    815

    727

    722

    883

    604

    606

    884

    749

    608

    M037_0.6

    1055

    878

    1059

    952

    1195

    954

    870

    1380

    325

    758

    770

    610

    1274

    1042

    M127_0.6

    s24

    804    		 Assembly1
    rna:3:1~75 1058,1248,1524,1639~1642,1701
    10459 7tql:3
    (3.2Å)
    		 75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS0000326EAC RF00005 Homo
    sapiens
    9606    		 35732735
    M352_0.6

    1235

    s46

    1075    		 Assembly1
    rna:2:1~1869 29~31,33,37~40
    10460 7tqv:G
    (3.43Å)
    		 33 N/A URS0000CBFF1E N/A synthetic
    construct
    32630    		 35801916
    35262076    		 Assembly1
    rna:H:17~49 4~23,25~36
    10461 7tqv:H
    (3.43Å)
    		 33 N/A URS0000CBFF4E N/A synthetic
    construct
    32630    		 35801916
    35262076    		 Assembly1
    rna:G:4~36 17~28,30~49
    10462 7ttu:1
    (3.0Å)
    		 2684 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00000AF0B7 RF02541 Staphylococcus
    aureus
    1280    		 35736238 Assembly1
    rna:2:2~112 906~908,962~963
    10463 7ttu:2
    (3.0Å)
    		 111 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00023359D0 RF00001 Staphylococcus
    aureus
    1280    		 35736238 Assembly1
    rna:1:4~2920 76~79,92,95
    10464 7ttw:1
    (2.9Å)
    		 2690 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00000AF0B7 RF02541 Staphylococcus
    aureus
    1280    		 35736238 Assembly1
    rna:2:2~112 906~908,962~963
    10465 7ttw:2
    (2.9Å)
    		 111 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00023359D0 RF00001 Staphylococcus
    aureus
    1280    		 35736238 Assembly1
    rna:1:4~2920 76~78,92,95
    10466 7tut:K
    (3.88Å)
    		 3543 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000A7632C RF02543 Oryctolagus
    cuniculus
    9986    		 36261528 Assembly1
    rna:q:1~76 3770~3771,4196~4198,4396~4397,
    4548
    rna:u:1~120 1736~1738,1792,1794~1796,1894,
    1909,1936,1942
    rna:v:1~156 1~22,58,146~147,339,341~348,35
    0~353,356~357,360,362,379~380,
    415~430,1304~1305,1333~1334,13
    71,2308~2309,2313,2333,2355,24
    44,2472,2486,2508~2509,2544,27
    78~2779,4162
    10467 7tut:q
    (3.88Å)
    		 76 GO:0030533 (F) triplet codon-amino aci... URS0002617744 RF00005 Oryctolagus
    cuniculus
    9986    		 36261528 Assembly1
    rna:K:1~5069 12~13,74~76
    10468 7tut:u
    (3.88Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000002B0D5 RF00001 Oryctolagus
    cuniculus
    9986    		 36261528 Assembly1
    rna:K:1~5069 77~80,84,88,98,100~101
    10469 7tut:v
    (3.88Å)
    		 156 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B2C76 RF00002 Oryctolagus
    cuniculus
    9986    		 36261528 Assembly1
    rna:K:1~5069 3~22,24~37,40,53~54,103,108,11
    2~113,115,125~126,136,138~156
    10470 7tzr:X
    (2.7Å)
    		 80 GO:0030976 (F) thiamine pyrophosphate ... URS000080DDEB RF00059 Escherichia
    coli
    562    		 35561226 Assembly1
    rna:Y:10~89 29~31
    10471 7tzr:Y
    (2.7Å)
    		 80 GO:0030976 (F) thiamine pyrophosphate ... URS000080DDEB RF00059 Escherichia
    coli
    562    		 35561226 Assembly1
    rna:X:10~89 29~31
    10472 7tzs:X
    (2.21Å)
    		 80 GO:0030976 (F) thiamine pyrophosphate ... URS000080DDEB RF00059 Escherichia
    coli
    562    		 35561226 Assembly1
    rna:Y:10~89 29~31
    10473 7tzs:Y
    (2.21Å)
    		 80 GO:0030976 (F) thiamine pyrophosphate ... URS000080DDEB RF00059 Escherichia
    coli
    562    		 35561226 Assembly1
    rna:X:10~89 29~31
    10474 7u0h:1
    (2.76Å)
    		 2722 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000061F377 RF02543 Saccharomyces
    cerevisiae
    BY4741
    1247190    		 36482249 Assembly1
    rna:2:1~158 1,3~23,59,143,330~337,339~342,
    345~346,349,351,368~369,404~41
    9,656~657,691,1394~1395,1398~1
    399,1418~1420,1441,1530,1558,1
    618~1620,1830~1832,2386,2994~2
    995
    rna:6:1~232 1,3~4,1570
    10475 7u0h:2
    (2.76Å)
    		 158 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001BF64E RF00002 Saccharomyces
    cerevisiae
    BY4741
    1247190    		 36482249 Assembly1
    rna:1:1~3396 1~22,24~33,35~37,40~41,53,104,
    114~115,128~129,136~150,152~15
    7
    10476 7u0h:6
    (2.76Å)
    		 59 N/A URS000261775E N/A Saccharomyces
    cerevisiae
    BY4741
    1247190    		 36482249 Assembly1
    rna:1:1~3396 229,232
    rna:2:1~158 1,230
    10477 7u2h:1A
    (2.55Å)
    		 2871 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001698E8 RF02541 Thermus
    thermophilus
    HB8
    300852    		 35766409 Assembly1
    rna:1B:1~120 861~864,915,917~919,958
    rna:1a:4~1533 1689,1700~1704,1832,1836~1837,
    1846,1848,1912~1913,1915~1916,
    1919~1920,1947~1948,1959~1961,
    2863~2864
    rna:1w:1~76 882,896~897,1913,1942,2482~248
    3,2506~2507,2553~2555,2583~258
    5,2602
    rna:1x:1~76 1907~1909,1922~1924,2251~2253,
    2439,2450~2451,2585,2601~2602
    rna:1y:1~76 1885,2112,2169,2394~2395,2421~
    2422,2432
    10478 7u2h:1B
    (2.55Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DEE8 RF00001 Thermus
    thermophilus
    HB8
    300852    		 35766409 Assembly1
    rna:1A:6~2897 78~81,90,98,100~102
    10479 7u2h:1a
    (2.55Å)
    		 1500 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DFED RF00177 Thermus
    thermophilus
    HB8
    300852    		 35766409 Assembly1
    rna:1A:6~2897 702,783~784,899,1407~1409,1418
    ,1429,1442A,1473~1475,1483~148
    4,1494~1496,1517
    rna:1v:12~24 530,926,1196,1397,1400~1401,14
    92~1493,1498,1503,1505,1507
    rna:1w:1~76 530,1054,1493
    rna:1x:1~76 790,966,1229~1230,1338~1340,14
    00
    10480 7u2h:1v
    (2.55Å)
    		 13 N/A N/A N/A Tequatrovirus
    T4
    10665    		 35766409 Assembly1
    rna:1a:4~1533 12~13,15~20,22~24
    rna:1w:1~76 19~21
    rna:1x:1~76 16~18
    10481 7u2h:1w
    (2.55Å)
    		 73 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00003845FE RF00005 Escherichia
    coli
    562    		 35766409 Assembly1
    rna:1A:6~2897 18,37~38,55~56,64,71,74~76
    rna:1a:4~1533 34~37
    rna:1v:12~24 34~37
    10482 7u2h:1x
    (2.55Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    562    		 35766409 Assembly1
    rna:1A:6~2897 11~13,24~25,74~76
    rna:1a:4~1533 29~32,34,38~41
    rna:1v:12~24 34~37
    10483 7u2h:1y
    (2.55Å)
    		 73 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00003845FE RF00005 Escherichia
    coli
    562    		 35766409 Assembly1
    rna:1A:6~2897 4,18,56,76
    10484 7u2h:2A
    (2.55Å)
    		 2800 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001698E8 RF02541 Thermus
    thermophilus
    HB8
    300852    		 35766409 Assembly2
    rna:2B:1~120 861~864,915,917~919,958
    rna:2a:4~1532 1689,1700,1702~1704,1832,1836~
    1837,1846,1848,1912~1916,1919~
    1920,1947~1949,1959~1960,2864
    rna:2w:1~76 882,896~897,1913,2482~2483,250
    6~2507,2553~2555,2583~2585,260
    2
    rna:2x:1~76 1907~1909,1922~1924,2251~2253,
    2439,2450~2451,2585,2601~2602
    rna:2y:1~76 1851,1885,2112,2169,2394~2395,
    2421~2422,2432
    10485 7u2h:2B
    (2.55Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DEE8 RF00001 Thermus
    thermophilus
    HB8
    300852    		 35766409 Assembly2
    rna:2A:6~2897 78~81,90,97~98,100~101
    10486 7u2h:2a
    (2.55Å)
    		 1503 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DFED RF00177 Thermus
    thermophilus
    HB8
    300852    		 35766409 Assembly2
    rna:2A:6~2897 702,783~784,899,1407~1410,1418
    ,1429~1430,1442A,1473~1475,148
    3~1484,1493~1496,1517
    rna:2v:12~24 530,926,1196,1397,1400~1402,14
    92~1493,1498,1503,1505~1507
    rna:2w:1~76 530,1054,1493
    rna:2x:1~76 790,966,1229~1230,1338~1340,14
    00
    10487 7u2h:2v
    (2.55Å)
    		 13 N/A N/A N/A Tequatrovirus
    T4
    10665    		 35766409 Assembly2
    rna:2a:4~1532 13,15~20,22~24
    rna:2w:1~76 19~21
    rna:2x:1~76 16~18
    10488 7u2h:2w
    (2.55Å)
    		 72 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00003845FE RF00005 Escherichia
    coli
    562    		 35766409 Assembly2
    rna:2A:6~2897 18,37~38,56,64,74~76
    rna:2a:4~1532 34~37
    rna:2v:12~24 34~37
    10489 7u2h:2x
    (2.55Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    562    		 35766409 Assembly2
    rna:2A:6~2897 11~13,24~25,74~76
    rna:2a:4~1532 30~32,34,38~41
    rna:2v:12~24 34~37
    10490 7u2h:2y
    (2.55Å)
    		 73 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00003845FE RF00005 Escherichia
    coli
    562    		 35766409 Assembly2
    rna:2A:6~2897 3,18,56,71~72,76
    rna:2a:4~1532 37~38
    rna:2x:1~76 35~36
    10491 7u2i:1A
    (2.55Å)
    		 2871 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001698E8 RF02541 Thermus
    thermophilus
    HB8
    300852    		 35766409 Assembly1
    rna:1B:1~120 861~864,915,917~919,958
    rna:1a:4~1533 1689,1700~1704,1832,1836~1837,
    1846,1848,1912~1916,1919~1920,
    1947~1949,1959~1961,2863~2864
    rna:1w:1~76 882~883,896~897,1913,1942,2482
    ~2483,2506~2507,2553~2555,2583
    ~2585,2602
    rna:1x:1~76 1907~1909,1922~1924,2251~2253,
    2439,2450~2451,2585,2601~2602
    rna:1y:1~76 1851,2112,2169,2394~2395,2421~
    2422,2432
    10492 7u2i:1B
    (2.55Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DEE8 RF00001 Thermus
    thermophilus
    HB8
    300852    		 35766409 Assembly1
    rna:1A:6~2897 78~81,90,98,100~102
    10493 7u2i:1a
    (2.55Å)
    		 1500 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DFED RF00177 Thermus
    thermophilus
    HB8
    300852    		 35766409 Assembly1
    rna:1A:6~2897 702,783~784,899~900,1407~1409,
    1418,1429,1442A,1473~1475,1483
    ~1484,1494~1496,1517
    rna:1v:12~24 530,926,1196,1397,1400~1402,14
    92~1493,1498,1503,1505,1507
    rna:1w:1~76 530,1054,1493
    rna:1x:1~76 790,966,1229~1230,1338~1341,14
    00
    10494 7u2i:1v
    (2.55Å)
    		 13 N/A N/A N/A Tequatrovirus
    T4
    10665    		 35766409 Assembly1
    rna:1a:4~1533 12~13,15~20,22~24
    rna:1w:1~76 19~21
    rna:1x:1~76 16~18
    10495 7u2i:1w
    (2.55Å)
    		 73 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00003845FE RF00005 Escherichia
    coli
    562    		 35766409 Assembly1
    rna:1A:6~2897 18,37~38,55~56,64,71,74~76
    rna:1a:4~1533 34~37
    rna:1v:12~24 34~37
    10496 7u2i:1x
    (2.55Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    562    		 35766409 Assembly1
    rna:1A:6~2897 11~13,24~25,74~76
    rna:1a:4~1533 30~32,34,38~41
    rna:1v:12~24 34~37
    10497 7u2i:1y
    (2.55Å)
    		 73 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00003845FE RF00005 Escherichia
    coli
    562    		 35766409 Assembly1
    rna:1A:6~2897 18,56,71,76
    10498 7u2i:2A
    (2.55Å)
    		 2800 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001698E8 RF02541 Thermus
    thermophilus
    HB8
    300852    		 35766409 Assembly2
    rna:2B:1~120 861~864,917~919,958
    rna:2a:4~1532 1700~1704,1832,1836~1837,1846,
    1848,1912~1916,1919~1920,1947~
    1948,1959~1960,2864
    rna:2w:1~76 882,897,1913,1942,2482,2506~25
    07,2553~2555,2583~2585,2602
    rna:2x:1~76 1907~1909,1922~1924,2251~2253,
    2439,2450~2451,2585,2601~2602
    rna:2y:1~76 1851,1885,2112,2169,2394~2395,
    2421~2422
    10499 7u2i:2B
    (2.55Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DEE8 RF00001 Thermus
    thermophilus
    HB8
    300852    		 35766409 Assembly2
    rna:2A:6~2897 78~81,90,97~98,100~102
    10500 7u2i:2a
    (2.55Å)
    		 1503 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DFED RF00177 Thermus
    thermophilus
    HB8
    300852    		 35766409 Assembly2
    rna:2A:6~2897 702,783~784,899,1407~1409,1418
    ,1429~1430,1442A,1473~1475,148
    3~1484,1493~1496,1517
    rna:2v:12~24 530,926,1196,1397,1400~1402,14
    92~1493,1498,1503,1505~1507
    rna:2w:1~76 530,1054,1493
    rna:2x:1~76 790,966,1229~1230,1338~1340,14
    00
    rna:2y:1~76 693,695
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    Reference:
  • Chengxin Zhang, Lydia Freddolino (2024) "FURNA: a database for function annotations of RNA structures," PLOS Biology 22(7): e3002476.