SEQ2FUN

FURNA
Download all results in tab-seperated text for 14210 RNAs.
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  • Hover over Ligand to view the name of the ligand and the ligand-binding nucleotides on the RNA.

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    # PDB
    (Resolution)    		 Length EC number
    & GO term     		RNAcentral Rfam Taxon PubMed ATtRACT
    motif     		Ligand &
    binding nucleotides
    10501 7u87:A
    (1.701Å)
    		 15 N/A N/A N/A synthetic
    construct
    32630    		 38579124 Assembly1
    rna:B:1~15 2~15
    10502 7u87:B
    (1.701Å)
    		 15 N/A N/A N/A synthetic
    construct
    32630    		 38579124 Assembly1
    rna:A:1~15 2~15
    10503 7u88:A
    (2.14Å)
    		 15 N/A N/A N/A synthetic
    construct
    32630    		 38579124 Assembly1
    rna:B:1~15 2~15
    10504 7u88:B
    (2.14Å)
    		 15 N/A N/A N/A synthetic
    construct
    32630    		 38579124 Assembly1
    rna:A:1~15 2~15
    10505 7u89:A
    (1.65Å)
    		 15 N/A N/A N/A synthetic
    construct
    32630    		 38579124 Assembly1
    rna:B:1~15 2~15
    10506 7u89:B
    (1.65Å)
    		 15 N/A N/A N/A synthetic
    construct
    32630    		 38579124 Assembly1
    rna:A:1~15 2~15
    10507 7u8a:A
    (2.1Å)
    		 15 N/A N/A N/A synthetic
    construct
    32630    		 38579124 Assembly1
    rna:B:1~15 2~15
    10508 7u8a:B
    (2.1Å)
    		 15 N/A N/A N/A synthetic
    construct
    32630    		 38579124 Assembly1
    rna:A:1~15 2~15
    10509 7u8b:A
    (1.73Å)
    		 15 N/A N/A N/A synthetic
    construct
    32630    		 N/A Assembly1
    rna:B:1~15 2~15
    10510 7u8b:B
    (1.73Å)
    		 15 N/A N/A N/A synthetic
    construct
    32630    		 N/A Assembly1
    rna:A:1~15 2~15
    10511 7ucj:2
    (3.1Å)
    		 72 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00023359AF RF00005 Oryctolagus
    cuniculus
    9986    		 35679869 Assembly1
    rna:1:43~48 34~37
    rna:5:1~5069 12~13,24~25,74~76
    rna:9:1~1869 30~32,34,38,40~41
    10512 7ucj:5
    (3.1Å)
    		 3499 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00023359B0 RF02540
    RF02543    		 Oryctolagus
    cuniculus
    9986    		 35679869 Assembly1
    rna:2:1~76 3769~3771,3909,4196~4198,4396~
    4397,4548
    rna:7:1~120 1736~1738,1741,1792,1794~1796,
    1894,1909,1936,1942
    rna:8:2~156 1~22,58,339,341~348,350~353,35
    5~357,360,362,379~380,415~430,
    1305,1333~1334,1371,2308~2309,
    2312~2313,2333,2444,2472,2487,
    2493,2508,2542~2544,2778~2779
    rna:9:1~1869 1563~1565,2884,3629,3711,3759~
    3761,3763,3766~3767,3794~3796,
    3806~3807
    10513 7ucj:7
    (3.1Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000002B0D5 RF00001 Oryctolagus
    cuniculus
    9986    		 35679869 Assembly1
    rna:5:1~5069 77~80,84,88,98,100~101,103
    10514 7ucj:8
    (3.1Å)
    		 150 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00023359AE RF00002 Oryctolagus
    cuniculus
    9986    		 35679869 Assembly1
    rna:5:1~5069 4~22,24~37,40~41,53~54,103,108
    ,110,112~113,115,126~128,138~1
    49,151~156
    10515 7ucj:9
    (3.1Å)
    		 1698 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000E60B90 RF01960
    RF01959
    RF00177    		 Oryctolagus
    cuniculus
    9986    		 35679869 Assembly1
    rna:2:1~76 1058,1248,1524~1525,1639~1641,
    1701
    rna:1:43~48 961,1207,1701~1702,1830
    rna:5:1~5069 677~678,970,1029~1030,1180,170
    8~1710,1719~1721,1731,1815~181
    6,1825~1827,1849
    10516 7uck:2
    (2.8Å)
    		 72 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00023359AF RF00005 Oryctolagus
    cuniculus
    9986    		 35679869 Assembly1
    rna:1:43~48 34~37
    rna:5:1~5069 12~13,24~25,74~76
    rna:9:1~1869 30~32,34,38,40~41
    10517 7uck:5
    (2.8Å)
    		 3546 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00023359AC RF02540
    RF02543    		 Oryctolagus
    cuniculus
    9986    		 35679869 Assembly1
    rna:2:1~76 3769~3771,3909,4196~4198,4396~
    4397,4548
    rna:7:1~120 1736~1738,1792,1794~1796,1894,
    1909,1936,1942
    rna:8:1~156 1~22,58,339,341~348,350~353,35
    6~357,360,362,379~380,415~430,
    1305,1333~1334,1371,2308~2309,
    2333~2334,2355,2444,2472,2487,
    2508,2542~2544,2778~2779
    rna:9:1~1869 1563~1564,2884~2885,3629,3711,
    3759~3761,3763,3766~3767,3794~
    3796,3806~3807
    10518 7uck:7
    (2.8Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000002B0D5 RF00001 Oryctolagus
    cuniculus
    9986    		 35679869 Assembly1
    rna:5:1~5069 77~80,84,88,98,100~101
    10519 7uck:8
    (2.8Å)
    		 151 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00023359AE RF00002 Oryctolagus
    cuniculus
    9986    		 35679869 Assembly1
    rna:5:1~5069 3~22,24~37,40~41,53~54,103,108
    ,110,112~113,115,124,126~128,1
    36,138~149,151~156
    10520 7uck:9
    (2.8Å)
    		 1698 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000E60B90 RF01960
    RF01959
    RF00177    		 Oryctolagus
    cuniculus
    9986    		 35679869 Assembly1
    rna:2:1~76 1058,1248,1524~1525,1639~1641,
    1701
    rna:1:43~48 961,1207,1701~1702,1830
    rna:5:1~5069 677~678,970,1028~1029,1180,170
    8~1710,1719~1721,1731,1815~181
    6,1825~1828,1849
    10521 7ug6:1
    (2.9Å)
    		 3058 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000061F377 RF02543 Saccharomyces
    cerevisiae
    S288C
    559292    		 36536102 Assembly1
    rna:2:1~158 1,3~23,59,143,330~337,339~342,
    345~346,349,351,368~369,404~41
    9,656~657,691,1394~1395,1399,1
    419~1420,1441,1530,1558,1585,1
    618,1620,1827,1830~1831,2386,2
    994~2995
    10522 7ug6:2
    (2.9Å)
    		 158 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001BF64E RF00002 Saccharomyces
    cerevisiae
    S288C
    559292    		 36536102 Assembly1
    rna:1:1~3396 1~22,24~33,35~37,40~41,53~54,1
    04,109,114~115,125,128~129,136
    ~150,152~156
    10523 7ug7:16
    (2.58Å)
    		 1514 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000081169C RF00177
    RF01959
    RF01960    		 Escherichia
    coli
    562    		 35500116 Assembly1
    rna:23:1~2903 702,783~784,899,1407~1409,1418
    ~1420,1428~1429,1473~1475,1483
    ~1484,1492,1494~1496,1517
    rna:Dt:1~77 966,1229~1230,1338~1341
    rna:Pt:1~76 790,1400
    rna:mR:36~45 530,693,1400,1402~1403,1493,14
    98
    10524 7ug7:23
    (2.58Å)
    		 2903 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B0F34 RF02540
    RF02541    		 Escherichia
    coli
    562    		 35500116 Assembly1
    rna:16:1~1533 1689,1700~1704,1832,1836~1837,
    1846,1848,1912~1913,1915~1916,
    1919~1920,1947~1950,1959~1961
    rna:5:1~120 861~863,915,917~918,958
    rna:Dt:1~77 1850~1852,1891~1893,2112,2168,
    2394~2395,2421~2422,2432
    rna:Pt:1~76 1908~1909,1922~1923,2063~2064,
    2251~2253,2450~2451,2585,2602
    10525 7ug7:5
    (2.58Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000049E57 RF00001 Escherichia
    coli
    562    		 35500116 Assembly1
    rna:23:1~2903 78~80,89~90,96~97,99~100
    10526 7ug7:Dt
    (2.58Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000057545F RF00005 Escherichia
    coli
    562    		 35500116 Assembly1
    rna:16:1~1533 31~33,35,41~42
    rna:23:1~2903 3~4,20,57,71~73,76~77
    rna:mR:36~45 35~38
    10527 7ug7:Pt
    (2.58Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    562    		 35500116 Assembly1
    rna:16:1~1533 34,38~39
    rna:23:1~2903 11~12,24~25,74~76
    rna:mR:36~45 34~37
    10528 7ug7:mR
    (2.58Å)
    		 10 N/A N/A N/A Escherichia
    coli
    562    		 35500116 Assembly1
    rna:16:1~1533 36~37,40~43,45
    rna:Dt:1~77 37~39
    rna:Pt:1~76 40~42
    10529 7unr:A
    (2.9Å)
    		 2884 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00003C2204 RF02540
    RF02541    		 Pseudomonas
    aeruginosa
    PAO1
    208964    		 N/A Assembly1
    rna:a:1~1527 1690~1693,1824,1833,1835,1882,
    1899~1903,1906~1907,1934~1935,
    1946~1948
    rna:v:2~76 1894~1896,1909~1911,2050,2238~
    2240,2437~2438,2589
    rna:B:2~118 850~852,904,906~907
    10530 7unr:B
    (2.9Å)
    		 117 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00005ACE34 RF00001 Pseudomonas
    aeruginosa
    PAO1
    208964    		 N/A Assembly1
    rna:A:1~2890 78~80,97,99~100
    10531 7unr:a
    (2.9Å)
    		 1522 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004149DE RF00177
    RF01959
    RF01960    		 Pseudomonas
    aeruginosa
    PAO1
    208964    		 N/A Assembly1
    rna:v:2~76 784,960,1223~1224,1332~1334,13
    94
    rna:w:13~18 687,920,1394,1396,1492
    rna:A:1~2890 696,778,1401~1403,1412,1423,14
    67~1469,1477~1478,1486,1488~14
    90,1511
    10532 7unr:v
    (2.9Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    562    		 N/A Assembly1
    rna:a:1~1527 30~32,34,38,40~41
    rna:w:13~18 34~37
    rna:A:1~2890 11~13,24~25,74~76
    10533 7unu:A
    (2.9Å)
    		 2884 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00003C2204 RF02540
    RF02541    		 Pseudomonas
    aeruginosa
    PAO1
    208964    		 N/A Assembly1
    rna:a:1~1527 1691,1693,1824,1835,1899~1900,
    1903,1906~1907,1934~1935,1946~
    1948
    rna:v:2~76 1894~1896,1910,2050,2238~2240,
    2437~2438,2589
    rna:B:2~118 850~852,904,906~907,948
    10534 7unu:B
    (2.9Å)
    		 117 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00005ACE34 RF00001 Pseudomonas
    aeruginosa
    PAO1
    208964    		 N/A Assembly1
    rna:A:1~2890 78~80,89,97,99~100
    10535 7unu:a
    (2.9Å)
    		 1522 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004149DE RF00177
    RF01959
    RF01960    		 Pseudomonas
    aeruginosa
    PAO1
    208964    		 N/A Assembly1
    rna:v:2~76 784,960,1223~1224,1332~1334,13
    94
    rna:w:13~18 687,920,1394~1396,1492
    rna:A:1~2890 696,778,1401~1402,1412,1423,14
    68,1477~1478,1486,1488~1490,15
    11
    10536 7unu:v
    (2.9Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    562    		 N/A Assembly1
    rna:a:1~1527 30~32,34,38,40~41
    rna:w:13~18 34~37
    rna:A:1~2890 11~12,24~25,74~76
    10537 7unv:A
    (2.7Å)
    		 2884 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00003C2204 RF02540
    RF02541    		 Pseudomonas
    aeruginosa
    PAO1
    208964    		 N/A Assembly1
    rna:a:1~1527 1690~1691,1693~1694,1833,1899~
    1903,1906~1907,1934~1936,1946~
    1948
    rna:B:2~118 850~852,904,906~907,948
    10538 7unv:B
    (2.7Å)
    		 117 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00005ACE34 RF00001 Pseudomonas
    aeruginosa
    PAO1
    208964    		 N/A Assembly1
    rna:A:1~2890 78~80,89,97,99~100
    10539 7unv:a
    (2.7Å)
    		 1522 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004149DE RF00177
    RF01959
    RF01960    		 Pseudomonas
    aeruginosa
    PAO1
    208964    		 N/A Assembly1
    rna:v:2~76 784,960,1223~1224,1332~1334,13
    94
    rna:w:13~18 920,1394,1396,1492
    rna:A:1~2890 696,1401~1403,1412~1413,1423~1
    424,1468~1469,1477~1478,1486,1
    488~1490,1511
    10540 7unv:v
    (2.7Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    562    		 N/A Assembly1
    rna:a:1~1527 30~32,34,38,40~42
    rna:w:13~18 34~37
    10541 7unw:A
    (2.6Å)
    		 2884 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00003C2204 RF02540
    RF02541    		 Pseudomonas
    aeruginosa
    PAO1
    208964    		 N/A Assembly1
    rna:a:1~1527 1690~1691,1693,1833,1835,1899~
    1900,1903,1906~1907,1934~1936,
    1946~1948
    rna:B:2~118 850~852,904,906~908,948
    10542 7unw:B
    (2.6Å)
    		 117 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00005ACE34 RF00001 Pseudomonas
    aeruginosa
    PAO1
    208964    		 N/A Assembly1
    rna:A:1~2890 78~81,89,97,99~100
    10543 7unw:a
    (2.6Å)
    		 1522 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004149DE RF00177
    RF01959
    RF01960    		 Pseudomonas
    aeruginosa
    PAO1
    208964    		 N/A Assembly1
    rna:v:2~76 784,960,1223,1332~1334,1394
    rna:w:13~18 920,1394~1395,1492
    rna:A:1~2890 696,1401~1403,1412~1413,1423,1
    468~1469,1477~1478,1486,1488~1
    490,1511
    10544 7unw:v
    (2.6Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    562    		 N/A Assembly1
    rna:a:1~1527 30~32,34,38,40~41
    rna:w:13~18 34~37
    10545 7uo0:B
    (3.4Å)
    		 373 EC:3.1.26.5 ribonuclease P
    GO:0004526 (F) ribonuclease P activity
    GO:0008033 (P) tRNA processing
    GO:0030680 (C) dimeric ribonuclease P ...    		 URS0000803A36 RF00010 Escherichia
    coli
    562    		 36045135 Assembly1
    rna:C:-4~77 67~70,181,246~248,250,292~293,
    331,333,360
    10546 7uo0:C
    (3.4Å)
    		 82 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000261771D RF00005 Escherichia
    coli
    562    		 36045135 Assembly1
    rna:B:1~373 -2~2,56,64~65,74~76
    10547 7uo1:B
    (3.2Å)
    		 373 EC:3.1.26.5 ribonuclease P
    GO:0004526 (F) ribonuclease P activity
    GO:0008033 (P) tRNA processing
    GO:0030680 (C) dimeric ribonuclease P ...    		 URS0000803A36 RF00010 Escherichia
    coli
    562    		 36045135 Assembly1
    rna:C:-4~77 67~70,118,129,181,231~234,246~
    248,258,292~294,330,332~333,35
    2
    10548 7uo1:C
    (3.2Å)
    		 82 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000261773C RF00005 Escherichia
    coli
    562    		 36045135 Assembly1
    rna:B:1~373 -2~3,19,54~55,57,63,65~66,73~7
    7
    10549 7uo4:P
    (3.38Å)
    		 34 N/A URS000261779E N/A synthetic
    construct
    32630    		 36725929 Assembly1
    rna:T:100~135 2~35
    10550 7uo4:T
    (3.38Å)
    		 36 N/A URS00026177A0 N/A synthetic
    construct
    32630    		 36725929 Assembly1
    rna:P:2~35 102~135
    10551 7uo7:P
    (3.09Å)
    		 32 N/A URS000261779E N/A synthetic
    construct
    32630    		 36725929 Assembly1
    rna:T:19~52 4~35
    10552 7uo7:T
    (3.09Å)
    		 34 N/A URS00026177A0 N/A synthetic
    construct
    32630    		 36725929 Assembly1
    rna:P:4~35 21~52
    10553 7uo9:P
    (3.13Å)
    		 32 N/A URS0002617797 N/A synthetic
    construct
    32630    		 36725929 Assembly1
    rna:T:100~134 4~35
    10554 7uo9:T
    (3.13Å)
    		 35 N/A URS00026177A3 N/A synthetic
    construct
    32630    		 36725929 Assembly1
    rna:P:4~35 103~134
    10555 7uob:P
    (2.68Å)
    		 33 N/A URS0002617797 N/A synthetic
    construct
    32630    		 36725929 Assembly1
    rna:T:100~135 2~34
    10556 7uob:T
    (2.68Å)
    		 36 N/A URS00026177A3 N/A synthetic
    construct
    32630    		 36725929 Assembly1
    rna:P:2~34 103~135
    10557 7uoe:P
    (2.67Å)
    		 33 N/A URS0002617797 N/A synthetic
    construct
    32630    		 36725929 Assembly1
    rna:T:99~135 3~8,10,13~14,17~20,22,24~34
    10558 7uoe:T
    (2.67Å)
    		 37 N/A URS000261779D N/A synthetic
    construct
    32630    		 36725929 Assembly1
    rna:P:2~34 103~113,115~120,123~124,128~13
    5
    10559 7uoo:1
    (2.34Å)
    		 2991 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000061F377 RF02543 Saccharomyces
    cerevisiae
    BY4741
    1247190    		 36864048 Assembly1
    rna:2:1~158 1,3~23,59,143,330~337,339~342,
    345~346,349,351,368~369,404~41
    9,656~657,691,1394~1395,1398~1
    399,1419~1420,1441,1530,1558,1
    584,1619~1620,1830~1831,2386,2
    994~2995
    rna:6:1~232 1,3,1570
    10560 7uoo:2
    (2.34Å)
    		 158 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001BF64E RF00002 Saccharomyces
    cerevisiae
    BY4741
    1247190    		 36864048 Assembly1
    rna:1:1~3396 1~22,24~33,35~37,40~41,53~54,1
    04,109,114~115,128,136~150,152
    ~157
    10561 7uoo:6
    (2.34Å)
    		 58 N/A URS000268138E N/A Saccharomyces
    cerevisiae
    BY4741
    1247190    		 36864048 Assembly1
    rna:1:1~3396 229,232
    rna:2:1~158 1,230
    10562 7uph:I
    (4.18Å)
    		 4438 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000234A4AC RF02541 Escherichia
    coli
    562    		 35836020
    31588918    		 Assembly1
    rna:J:1~118 2362~2364,2409~2412,2452~2453,
    3788~3789
    10563 7uph:J
    (4.18Å)
    		 118 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000366A67 RF00001 Escherichia
    coli
    562    		 35836020
    31588918    		 Assembly1
    rna:I:1~4438 45~46,78~79,88,98~100
    10564 7uqb:1
    (2.43Å)
    		 2991 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000061F377 RF02543 Saccharomyces
    cerevisiae
    BY4741
    1247190    		 36864048 Assembly1
    rna:2:1~158 1,3~23,59,143,330~337,339~342,
    345~346,349,351,368~369,404~41
    9,656~657,691,1394~1395,1399,1
    419~1420,1441,1530,1558,1584,1
    619~1620,1830~1832,2386,2994~2
    995
    rna:6:1~232 1,3,1570~1571
    10565 7uqb:2
    (2.43Å)
    		 158 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001BF64E RF00002 Saccharomyces
    cerevisiae
    BY4741
    1247190    		 36864048 Assembly1
    rna:1:1~3396 1~22,24~33,35~37,40~41,53~54,1
    04,106,109,113~115,128,136~150
    ,152~157
    10566 7uqb:6
    (2.43Å)
    		 58 N/A URS00026813B0 N/A Saccharomyces
    cerevisiae
    BY4741
    1247190    		 36864048 Assembly1
    rna:1:1~3396 229,232
    rna:2:1~158 1,230
    10567 7uqz:1
    (2.44Å)
    		 2986 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000061F377 RF02543 Saccharomyces
    cerevisiae
    BY4741
    1247190    		 36864048 Assembly1
    rna:2:1~158 1,3~23,59,143,330~337,339~342,
    345~346,349,351,368~369,404~41
    9,656~657,691,1394~1395,1399,1
    419~1420,1441,1530,1558,1584~1
    585,1619~1620,1830~1832,2386~2
    387,2994~2995
    rna:6:1~232 1,3,1570
    10568 7uqz:2
    (2.44Å)
    		 158 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001BF64E RF00002 Saccharomyces
    cerevisiae
    BY4741
    1247190    		 36864048 Assembly1
    rna:1:1~3396 1~22,24~33,35~37,40~41,53~54,1
    04,109,113~115,128,136~150,152
    ~157
    10569 7uqz:6
    (2.44Å)
    		 58 N/A URS00026813B0 N/A Saccharomyces
    cerevisiae
    BY4741
    1247190    		 36864048 Assembly1
    rna:1:1~3396 229,232
    rna:2:1~158 1,230
    10570 7uu3:C
    (3.099Å)
    		 11 N/A URS000268136E N/A synthetic
    construct
    32630    		 36470880 Assembly1
    rna:D:1~11 1~8
    10571 7uu3:D
    (3.099Å)
    		 11 N/A URS0002681380 N/A synthetic
    construct
    32630    		 36470880 Assembly1
    rna:C:1~11 1~8
    10572 7uu5:M
    (2.9Å)
    		 11 N/A URS0002681383 N/A synthetic
    construct
    32630    		 36470880 Assembly1
    rna:N:2~12 2,5~12
    10573 7uu5:N
    (2.9Å)
    		 11 N/A URS000268137C N/A synthetic
    construct
    32630    		 36470880 Assembly1
    rna:M:2~12 2,5~12
    10574 7uvv:A
    (2.5Å)
    		 2724 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000231197A RF02541 Acinetobacter
    baumannii
    AB0057
    480119    		 37192172 Assembly1
    rna:B:1~115 859~861,915~916,955
    rna:a:3~1530 1701,1842~1844,1908~1909,1915~
    1916,1944,1955~1956
    rna:v:1~77 1919,2059,2247~2249,2446~2447,
    2598
    10575 7uvv:B
    (2.5Å)
    		 115 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00002D8B10 RF00001 Acinetobacter
    baumannii
    AB0057
    480119    		 37192172 Assembly1
    rna:A:9~2898 76~78,86~87,94,96~97
    10576 7uvv:a
    (2.5Å)
    		 1528 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00023119FB RF00177
    RF01959
    RF02542
    RF01960    		 Acinetobacter
    baumannii
    AB0057
    480119    		 37192172 Assembly1
    rna:A:9~2898 699,1404~1405,1415,1426,1480~1
    481,1489,1491~1492,1514
    rna:v:1~77 963,1226~1227,1335~1337,1397
    rna:w:1~3 1397~1399,1495
    10577 7uvv:v
    (2.5Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00002D670D RF00005 Acinetobacter
    baumannii
    AB0057
    480119    		 37192172 Assembly1
    rna:A:9~2898 12,75~77
    rna:a:3~1530 31~33,35,41~42
    rna:w:1~3 35~38
    10578 7uvw:A
    (2.37Å)
    		 2719 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000231197A RF02541 Acinetobacter
    baumannii
    AB0057
    480119    		 37192172 Assembly1
    rna:B:1~115 859~861,915~916,955
    rna:a:3~1530 1701,1842~1843,1944,1955~1956
    rna:v:1~77 1847,2390~2391,2417~2418,2428
    10579 7uvw:B
    (2.37Å)
    		 115 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00002D8B10 RF00001 Acinetobacter
    baumannii
    AB0057
    480119    		 37192172 Assembly1
    rna:A:9~2898 76~78,86,94,96~97
    10580 7uvw:a
    (2.37Å)
    		 1528 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00023119FB RF00177
    RF01959
    RF02542
    RF01960    		 Acinetobacter
    baumannii
    AB0057
    480119    		 37192172 Assembly1
    rna:A:9~2898 699,1415,1426,1480~1481
    rna:v:1~77 963,1226,1335~1337
    10581 7uvw:v
    (2.37Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00002D670D RF00005 Acinetobacter
    baumannii
    AB0057
    480119    		 37192172 Assembly1
    rna:A:9~2898 3,72,76~77
    rna:a:3~1530 31~32,35,41~42
    rna:w:1~3 35~38
    10582 7uvx:A
    (2.35Å)
    		 2715 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000231197A RF02541 Acinetobacter
    baumannii
    AB0057
    480119    		 37192172 Assembly1
    rna:B:1~115 859~861,915~916,955
    rna:a:3~1530 1687,1701~1702,1842~1843,1944
    10583 7uvx:B
    (2.35Å)
    		 115 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00002D8B10 RF00001 Acinetobacter
    baumannii
    AB0057
    480119    		 37192172 Assembly1
    rna:A:9~2898 76~78,86,94,96~97
    10584 7uvx:a
    (2.35Å)
    		 1528 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00023119FB RF00177
    RF01959
    RF02542
    RF01960    		 Acinetobacter
    baumannii
    AB0057
    480119    		 37192172 Assembly1
    rna:A:9~2898 699,1415,1426,1472,1480
    10585 7uvy:A
    (2.39Å)
    		 2724 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000231197A RF02541 Acinetobacter
    baumannii
    AB0057
    480119    		 37192172 Assembly1
    rna:B:1~115 859~861,913,915~917,948,955
    rna:a:3~1530 1699,1701~1702,1842~1843,1908~
    1909,1915~1916,1943~1944,1955~
    1956
    rna:v:1~77 2060,2247~2249,2446~2447,2598
    10586 7uvy:B
    (2.39Å)
    		 115 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00002D8B10 RF00001 Acinetobacter
    baumannii
    AB0057
    480119    		 37192172 Assembly1
    rna:A:9~2898 76~79,85~87,94,96~97
    10587 7uvy:a
    (2.39Å)
    		 1528 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00023119FB RF00177
    RF01959
    RF02542
    RF01960    		 Acinetobacter
    baumannii
    AB0057
    480119    		 37192172 Assembly1
    rna:A:9~2898 699,1404~1405,1415,1426,1471~1
    472,1480~1481,1489,1491~1492,1
    514
    rna:v:1~77 963,1226~1227,1335~1337,1397
    rna:w:1~3 923,1397~1399,1495
    10588 7uvy:v
    (2.39Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00002D670D RF00005 Acinetobacter
    baumannii
    AB0057
    480119    		 37192172 Assembly1
    rna:A:9~2898 75~77
    rna:a:3~1530 31~33,35,42
    rna:w:1~3 35~37
    10589 7uvz:A
    (2.21Å)
    		 2730 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000231197A RF02541 Acinetobacter
    baumannii
    AB0057
    480119    		 37192172 Assembly1
    rna:B:1~115 859~861,913,915~917,955
    rna:a:3~1530 1701,1842~1843,1908~1909,1912,
    1915,1955
    rna:v:1~77 1847,1888,2390~2391,2417~2418,
    2428
    10590 7uvz:B
    (2.21Å)
    		 115 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00002D8B10 RF00001 Acinetobacter
    baumannii
    AB0057
    480119    		 37192172 Assembly1
    rna:A:9~2898 76~79,86,94,96~97
    10591 7uvz:a
    (2.21Å)
    		 1528 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00023119FB RF00177
    RF01959
    RF02542
    RF01960    		 Acinetobacter
    baumannii
    AB0057
    480119    		 37192172 Assembly1
    rna:A:9~2898 699,1404~1405,1426,1480,1489,1
    491~1492,1514
    rna:v:1~77 963,1226~1227,1335~1337
    10592 7uvz:v
    (2.21Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00002D670D RF00005 Acinetobacter
    baumannii
    AB0057
    480119    		 37192172 Assembly1
    rna:A:9~2898 3,71~72,76~77
    rna:a:3~1530 31~33,35,41~42
    rna:w:1~3 35~38
    10593 7uw1:A
    (2.21Å)
    		 2726 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000231197A RF02541 Acinetobacter
    baumannii
    AB0057
    480119    		 37192172 Assembly1
    rna:B:1~115 859~861,913,915~917,955
    rna:a:3~1530 1687,1701,1908~1911,1915
    10594 7uw1:B
    (2.21Å)
    		 115 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00002D8B10 RF00001 Acinetobacter
    baumannii
    AB0057
    480119    		 37192172 Assembly1
    rna:A:9~2898 76~79,86~87,94,96~97
    10595 7uw1:a
    (2.21Å)
    		 1528 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00023119FB RF00177
    RF01959
    RF02542
    RF01960    		 Acinetobacter
    baumannii
    AB0057
    480119    		 37192172 Assembly1
    rna:A:9~2898 1404~1406,1426,1472,1480,1489,
    1491~1492
    10596 7uzx:G
    (3.49Å)
    		 31 N/A URS00023359D7 N/A Staphylococcus
    epidermidis
    RP62A
    176279    		 35714601 Assembly1
    rna:L:7~11 21~25
    10597 7uzy:G
    (4.05Å)
    		 30 N/A URS00023359D7 N/A Staphylococcus
    epidermidis
    RP62A
    176279    		 35714601 Assembly1
    rna:L:7~21 16~19,21~25,27~30
    10598 7uzy:L
    (4.05Å)
    		 14 N/A URS00023359D8 N/A Staphylococcus
    epidermidis
    RP62A
    176279    		 35714601 Assembly1
    rna:G:1~30 7,9~10,13~16,18~21
    10599 7v01:G
    (3.67Å)
    		 30 N/A URS00023359D5 N/A Staphylococcus
    epidermidis
    RP62A
    176279    		 35714601 Assembly1
    rna:U:7~32 6~7,9~13,17~19,21~25,27~29
    10600 7v01:U
    (3.67Å)
    		 25 N/A URS00023359D4 N/A Staphylococcus
    epidermidis
    RP62A
    176279    		 35714601 Assembly1
    rna:G:1~30 7~10,13,15~16,18~21,24~31
    << < 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 > >>
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    Reference:
  • Chengxin Zhang, Lydia Freddolino (2024) "FURNA: a database for function annotations of RNA structures," PLOS Biology 22(7): e3002476.