SEQ2FUN

FURNA
Download all results in tab-seperated text for 14210 RNAs.
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  • Hover over Ligand to view the name of the ligand and the ligand-binding nucleotides on the RNA.

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    # PDB
    (Resolution)    		 Length EC number
    & GO term     		RNAcentral Rfam Taxon PubMed ATtRACT
    motif     		Ligand &
    binding nucleotides
    11101 8bhj:4
    (2.81Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    K-12
    83333    		 37553384 Assembly1
    rna:0:1~2903 11~12,24~25,74~76
    rna:2:1~1534 30~32,34,38~41
    rna:3:13~22 35~37
    11102 8bhj:5
    (2.81Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000042DDAB RF00005 Escherichia
    coli
    K-12
    83333    		 37553384 Assembly1
    rna:0:1~2903 19,56,63,74~76
    rna:2:1~1534 34~37
    rna:3:13~22 34~37
    11103 8bhl:0
    (2.21Å)
    		 2758 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B0F34 RF02541 Escherichia
    coli
    K-12
    83333    		 37553384 Assembly1
    rna:1:1~120 861~863,918
    rna:2:1~1534 1703~1704,1832,1837,1846,1848,
    1912~1913,1915~1916,1919~1920,
    1947~1948,1959~1960
    rna:4:0 1909,1922~1923,2063,2251~2253,
    2450~2451,2602
    11104 8bhl:1
    (2.21Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000049E57 RF00001 Escherichia
    coli
    K-12
    83333    		 37553384 Assembly1
    rna:0:1~2903 78~80,97,99~100
    11105 8bhl:2
    (2.21Å)
    		 1534 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00000ABFE9 RF00177
    RF01959
    RF02542
    RF01960    		 Escherichia
    coli
    K-12
    83333    		 37553384 Assembly1
    rna:0:1~2903 702,784,899,1407~1409,1418,142
    9,1483~1484,1492,1494~1495,151
    7
    rna:3:13~22 693,788,1397,1400,1498,1505~15
    06
    rna:4:0 790,966,1338~1341,1400
    11106 8bhl:3
    (2.21Å)
    		 10 N/A N/A N/A synthetic
    construct
    32630    		 37553384 Assembly1
    rna:2:1~1534 13,15~18,22
    rna:4:0 16~18
    11107 8bhl:4
    (2.21Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    K-12
    83333    		 37553384 Assembly1
    rna:0:1~2903 11,24~25,74~76
    rna:2:1~1534 31~32,34,38,40~41
    rna:3:13~22 34~37
    11108 8bhn:0
    (2.85Å)
    		 2758 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B0F34 RF02541 Escherichia
    coli
    K-12
    83333    		 37553384 Assembly1
    rna:1:1~120 861~863,917~918
    rna:2:1~1534 1703,1837,1846,1848,1912,1916,
    1919~1920,1947~1948,1959~1960
    rna:4:0~76 1909,1923,2063,2251~2252,2255,
    2450,2602
    rna:5:1~76 896,2482,2507,2555,2583~2584
    11109 8bhn:1
    (2.85Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000049E57 RF00001 Escherichia
    coli
    K-12
    83333    		 37553384 Assembly1
    rna:0:1~2903 78~80,97,99~100
    11110 8bhn:2
    (2.85Å)
    		 1534 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00000ABFE9 RF00177
    RF01959
    RF02542
    RF01960    		 Escherichia
    coli
    K-12
    83333    		 37553384 Assembly1
    rna:0:1~2903 702,784,1407~1408,1418,1429,14
    83~1484,1494~1495,1517
    rna:3:13~22 693,788,1400,1492~1493,1498,15
    06
    rna:4:0~76 790,966,1229,1338~1340,1400
    rna:5:1~76 530,1054,1493
    11111 8bhn:3
    (2.85Å)
    		 10 N/A N/A N/A synthetic
    construct
    32630    		 37553384 Assembly1
    rna:2:1~1534 13,15~20
    rna:4:0~76 16,18
    rna:5:1~76 19~21
    11112 8bhn:4
    (2.85Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    K-12
    83333    		 37553384 Assembly1
    rna:0:1~2903 1,11~12,24,74~76
    rna:2:1~1534 30~32,34,38,40~41
    rna:3:13~22 34~35,37
    11113 8bhn:5
    (2.85Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000042DDAB RF00005 Escherichia
    coli
    K-12
    83333    		 37553384 Assembly1
    rna:0:1~2903 56,63,74~76
    rna:2:1~1534 34~35,37
    rna:3:13~22 34,36~37
    11114 8bhp:0
    (2.37Å)
    		 2758 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B0F34 RF02541 Escherichia
    coli
    K-12
    83333    		 37553384 Assembly1
    rna:1:1~120 861~863,918
    rna:2:1~1534 1703,1832,1837,1846,1848,1912~
    1913,1919~1920,1947~1948,1959~
    1960
    rna:4:0 1908~1909,1922~1923,2063,2251~
    2253,2450~2451,2602
    11115 8bhp:1
    (2.37Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000049E57 RF00001 Escherichia
    coli
    K-12
    83333    		 37553384 Assembly1
    rna:0:1~2903 78~80,97,99~100
    11116 8bhp:2
    (2.37Å)
    		 1534 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00000ABFE9 RF00177
    RF01959
    RF02542
    RF01960    		 Escherichia
    coli
    K-12
    83333    		 37553384 Assembly1
    rna:0:1~2903 702,784,899,1407~1408,1418,142
    9,1483~1484,1492,1494~1495,151
    7
    rna:3:13~22 693,788,1397,1400,1498,1505~15
    06
    rna:4:0 790,966,1229,1338~1340,1400
    11117 8bhp:3
    (2.37Å)
    		 10 N/A N/A N/A synthetic
    construct
    32630    		 37553384 Assembly1
    rna:2:1~1534 13,15,17~18,22
    rna:4:0 16,18
    11118 8bhp:4
    (2.37Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    K-12
    83333    		 37553384 Assembly1
    rna:0:1~2903 11,24~25,74~76
    rna:2:1~1534 30~32,34,38,40~41
    rna:3:13~22 34~37
    11119 8bil:0
    (2.04Å)
    		 2758 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B0F34 RF02541 Escherichia
    coli
    K-12
    83333    		 37553384 Assembly1
    rna:1:1~120 861~863,917~918
    rna:2:1~1534 1702~1703,1837,1848,1912~1913,
    1915~1916,1919~1920,1947~1948,
    1959~1960
    rna:4:0 1908~1909,1922~1923,2063,2251~
    2253,2450~2451,2602
    11120 8bil:1
    (2.04Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000049E57 RF00001 Escherichia
    coli
    K-12
    83333    		 37553384 Assembly1
    rna:0:1~2903 78~80,97,99~100
    11121 8bil:2
    (2.04Å)
    		 1534 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00000ABFE9 RF00177
    RF01959
    RF02542
    RF01960    		 Escherichia
    coli
    K-12
    83333    		 37553384 Assembly1
    rna:0:1~2903 702,784,1407~1409,1418,1429,14
    83~1484,1492,1494~1495,1517
    rna:3:13~22 693,788,1397,1400~1401,1493,14
    98,1505
    rna:4:0 790,966,1229,1338~1340,1400
    11122 8bil:3
    (2.04Å)
    		 10 N/A N/A N/A synthetic
    construct
    32630    		 37553384 Assembly1
    rna:2:1~1534 13,15~19,22
    rna:4:0 16~18
    11123 8bil:4
    (2.04Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    K-12
    83333    		 37553384 Assembly1
    rna:0:1~2903 11,24~25,74~76
    rna:2:1~1534 30~32,34,38,40~41
    rna:3:13~22 34~37
    11124 8bim:0
    (2.04Å)
    		 2758 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B0F34 RF02541 Escherichia
    coli
    K-12
    83333    		 37553384 Assembly1
    rna:1:1~120 861~863,918
    rna:2:1~1534 1702~1703,1837,1848,1912~1913,
    1915~1916,1919~1920,1947~1948,
    1959~1960
    rna:4:0 1908~1909,1922~1923,2063,2251~
    2253,2450~2451,2602
    11125 8bim:1
    (2.04Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000049E57 RF00001 Escherichia
    coli
    K-12
    83333    		 37553384 Assembly1
    rna:0:1~2903 78~80,97,99~100
    11126 8bim:2
    (2.04Å)
    		 1534 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00000ABFE9 RF00177
    RF01959
    RF02542
    RF01960    		 Escherichia
    coli
    K-12
    83333    		 37553384 Assembly1
    rna:0:1~2903 702,784,1407~1409,1418,1429,14
    83~1484,1492,1494~1495,1517
    rna:3:13~22 693,788,1400~1401,1493,1498,15
    05~1506
    rna:4:0 790,966,1229,1338~1340,1400
    11127 8bim:3
    (2.04Å)
    		 10 N/A N/A N/A synthetic
    construct
    32630    		 37553384 Assembly1
    rna:2:1~1534 13,15~19
    rna:4:0 16~18
    11128 8bim:4
    (2.04Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    K-12
    83333    		 37553384 Assembly1
    rna:0:1~2903 11,24~25,74~76
    rna:2:1~1534 30~32,34,38,40~41
    rna:3:13~22 34~37
    11129 8bip:1
    (3.1Å)
    		 3301 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00026813B8 RF02543 Saccharomyces
    cerevisiae
    4932    		 37079644
    M107_0.6

    M080_0.6

    M299_0.6

    16    		 Assembly1
    rna:C4:1~121 996~999,1052,1054~1056,1156,11
    71,1197,1203
    rna:C3:1~158 3~23,59,143,330~337,339~342,34
    5~346,349,351,368~369,404~419,
    656~657,691,1394~1395,1398~139
    9,1419~1420,1441,1530,1558,158
    4,1618~1619,1830~1832,2386,258
    5,2994~2995
    11130 8bip:C3
    (3.1Å)
    		 158 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001BF64E RF00002 Saccharomyces
    cerevisiae
    4932    		 37079644
    441    		 Assembly1
    rna:1:3~3396 1,3~22,24~37,40,53~54,104,109,
    112~115,125,129,136~152,154~15
    7
    11131 8bip:C4
    (3.1Å)
    		 121 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000055688D RF00001 Saccharomyces
    cerevisiae
    4932    		 37079644 Assembly1
    rna:1:3~3396 79~82,86,90,100,102~104
    11132 8bjq:1
    (3.8Å)
    		 3301 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00026813B8 RF02543 Saccharomyces
    cerevisiae
    4932    		 37079644
    M107_0.6

    M080_0.6

    M299_0.6

    16    		 Assembly1
    rna:C4:1~121 996~999,1052,1054~1056,1156,11
    71,1197,1203
    rna:C3:1~158 3~23,59,143,330~337,339~342,34
    5~346,349,351,368~369,404~419,
    656~657,691,1394~1395,1398~139
    9,1419~1420,1441,1530,1558,161
    8,1830~1832,2386,2585,2994~299
    5
    11133 8bjq:C3
    (3.8Å)
    		 158 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001BF64E RF00002 Saccharomyces
    cerevisiae
    4932    		 37079644
    441    		 Assembly1
    rna:1:3~3396 1~22,24~37,40,53~54,104,109,11
    3~115,129,136~152,154~157
    11134 8bjq:C4
    (3.8Å)
    		 121 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000055688D RF00001 Saccharomyces
    cerevisiae
    4932    		 37079644 Assembly1
    rna:1:3~3396 79~82,86,90,100,102~104
    11135 8bn3:1
    (2.4Å)
    		 3143 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00029156E2 RF02543 Saccharomyces
    cerevisiae
    4932    		 38324474
    M107_0.6

    M080_0.6

    M299_0.6

    16    		 Assembly1
    rna:3:1~121 996~998,1052,1054~1056,1156,11
    71,1197,1203
    rna:4:1~158 3~23,59,143,330~337,339~342,34
    5~346,349,351,368~369,404~419,
    656~657,691,1394~1395,1398~139
    9,1418~1420,1441,1530,1558,157
    1~1572,1584~1585,1618~1619,183
    0~1832,2386,2585,2994~2995
    rna:2:1~1785 846~848,1935~1936,2125,2205,22
    55~2256,2258~2259,2262~2263,22
    90~2292,2302~2304
    11136 8bn3:2
    (2.4Å)
    		 1737 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000291567B RF01960
    RF02542
    RF01959
    RF00177    		 Saccharomyces
    cerevisiae
    4932    		 38324474
    101

    441

    M080_0.6

    386

    M107_0.6

    497

    490    		 Assembly1
    rna:1:3~3396 628~629,913,971~973,1631~1633,
    1642~1644,1654,1733~1734,1744~
    1746,1767
    11137 8bn3:3
    (2.4Å)
    		 121 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000055688D RF00001 Saccharomyces
    cerevisiae
    4932    		 38324474 Assembly1
    rna:1:3~3396 79~82,86,90,100,102~103
    11138 8bn3:4
    (2.4Å)
    		 158 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001BF64E RF00002 Saccharomyces
    cerevisiae
    4932    		 38324474
    441    		 Assembly1
    rna:1:3~3396 1~22,24~33,35~37,40~41,53~54,1
    04,106,109~110,113~115,119,126
    ~127,129,136~157
    11139 8bpo:A1
    (2.8Å)
    		 3543 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000268142E RF02543 Oryctolagus
    cuniculus
    9986    		 37295431 Assembly1
    rna:B1:1~120 1736~1739,1741,1792~1796,1894,
    1909,1936,1942
    rna:C1:1~156 2~22,58,146~147,339,341~348,35
    0~353,356~357,360,362,379~380,
    415~430,1304~1305,1333~1334,13
    71,2308~2309,2312~2313,2333~23
    34,2355,2444,2472,2486,2508,25
    42,2544,2778~2779,3890,4162
    11140 8bpo:B1
    (2.8Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000002B0D5 RF00001 Oryctolagus
    cuniculus
    9986    		 37295431 Assembly1
    rna:A1:1~5069 77~80,84,88,98,100~103
    11141 8bpo:C1
    (2.8Å)
    		 151 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B2C76 RF00002
    RF02540    		 Oryctolagus
    cuniculus
    9986    		 37295431 Assembly1
    rna:A1:1~5069 3~22,24~37,40~41,53~54,103,108
    ,110~113,115,124~126,128,136,1
    38~156
    11142 8bqd:2
    (3.9Å)
    		 1771 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0001A16A88 RF01960
    RF02542
    RF01959
    RF00177    		 Saccharomyces
    cerevisiae
    4932    		 37079644
    101

    441

    M080_0.6

    386

    M107_0.6

    497

    490    		 Assembly1
    rna:BQ:3~3396 628,913,971~972,1644~1646,1655
    ~1657,1667,1746~1747,1757~1759
    ,1780
    11143 8bqd:BQ
    (3.9Å)
    		 3299 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00026813B8 RF02543 Saccharomyces
    cerevisiae
    4932    		 37079644
    M107_0.6

    M080_0.6

    M299_0.6

    16    		 Assembly1
    rna:2:1~1799 846~847,1935,2124~2125,2207,22
    55~2259,2262~2263,2290~2292,23
    02~2303,2330
    rna:BR:1~121 996~999,1052~1055,1171,1197,12
    03
    rna:BS:1~158 3~23,59,143,330~337,339~342,34
    5~346,349,351,368~369,404~419,
    656,691,1394~1395,1398~1399,14
    18~1420,1441,1530,1558,1618,18
    30~1832,2386~2387,2585,2994~29
    95
    11144 8bqd:BR
    (3.9Å)
    		 121 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000055688D RF00001 Saccharomyces
    cerevisiae
    4932    		 37079644 Assembly1
    rna:BQ:3~3396 79~81,86,90,100,102~104
    11145 8bqd:BS
    (3.9Å)
    		 158 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001BF64E RF00002 Saccharomyces
    cerevisiae
    4932    		 37079644
    441    		 Assembly1
    rna:BQ:3~3396 1~22,24~37,40,53~54,104,109,11
    3~115,126,129,136,138~157
    11146 8bqx:2
    (3.8Å)
    		 1771 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0001A16A88 RF01960
    RF02542
    RF01959
    RF00177    		 Saccharomyces
    cerevisiae
    4932    		 37079644
    101

    441

    M080_0.6

    386

    M107_0.6

    497

    490    		 Assembly1
    rna:BQ:3~3396 628,913,971~972,1644~1646,1655
    ~1657,1667,1746~1747,1757~1759
    ,1780
    11147 8bqx:BQ
    (3.8Å)
    		 3301 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00026813C4 RF02543 Saccharomyces
    cerevisiae
    4932    		 37079644
    M107_0.6

    M080_0.6

    M299_0.6

    16    		 Assembly1
    rna:2:1~1799 846~847,1935,2124~2125,2207,22
    55~2259,2262~2263,2290~2292,23
    02~2303,2330
    rna:BR:1~121 996~999,1052~1055,1171,1197,12
    03
    rna:BS:1~158 3~23,59,143,330~337,339~342,34
    5~346,349,351,368~369,404~419,
    656,691,1394~1395,1398~1399,14
    18~1420,1441,1530,1558,1618,18
    30~1832,2386~2387,2585,2994~29
    95
    11148 8bqx:BR
    (3.8Å)
    		 121 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000055688D RF00001 Saccharomyces
    cerevisiae
    4932    		 37079644 Assembly1
    rna:BQ:3~3396 79~81,86,90,100,102~104
    11149 8bqx:BS
    (3.8Å)
    		 158 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001BF64E RF00002 Saccharomyces
    cerevisiae
    4932    		 37079644
    441    		 Assembly1
    rna:BQ:3~3396 1~22,24~37,40,53~54,104,109,11
    3~115,126,129,136,138~157
    11150 8br8:LD
    (3.35Å)
    		 142 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000268138A RF00002 Giardia
    lamblia
    ATCC
    50803
    184922    		 36912103 Assembly1
    rna:Lt:1~2691 1~7,9~23,25~32,34~38,41~42,53~
    55,76,104,107~108,112~113,123~
    134,136~142
    11151 8br8:LE
    (3.35Å)
    		 117 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00026813A5 RF00001 Giardia
    lamblia
    ATCC
    50803
    184922    		 36912103 Assembly1
    rna:Lt:1~2691 78~81,85,89,98~103
    11152 8br8:Lt
    (3.35Å)
    		 2593 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0002681395 RF02543 Giardia
    lamblia
    ATCC
    50803
    184922    		 36912103 Assembly1
    rna:LD:1~142 1~22,58,123,280~281,283~288,29
    0~293,295~297,300,302~303,320~
    321,354~369,404~405,1083~1084,
    1107~1108,1129,1214,1240,1257,
    1465~1467,1873~1875
    rna:LE:2~118 711~714,765~769,866,881,902~90
    3
    rna:Lu:1~75 1698~1700,1723~1724,1942,1970,
    2189,2216~2217
    rna:St:1~1454 563~565,1553,1567~1568,1613~16
    14,1679,1683~1684,1694~1695,17
    43~1747,1750~1751,1778~1780,17
    90~1792,1818
    11153 8br8:Lu
    (3.35Å)
    		 57 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS0000326EAC N/A Giardia
    lamblia
    ATCC
    50803
    184922    		 36912103 Assembly1
    rna:Lt:1~2691 2~4,18,55,69~71,74~75
    11154 8br8:St
    (3.35Å)
    		 1454 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00026813B3 RF01960
    RF02542
    RF01959
    RF00177    		 Giardia
    lamblia
    ATCC
    50803
    184922    		 36912103 Assembly1
    rna:Lt:1~2691 508~509,667,725~727,748~749,86
    7,1332~1335,1343~1345,1355,139
    3,1401~1403,1410~1414,1435
    11155 8brm:LD
    (3.33Å)
    		 142 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000268139E RF00002 Giardia
    lamblia
    ATCC
    50803
    184922    		 36912103 Assembly1
    rna:Lt:1~2691 1~7,9~23,25~32,34~38,41~42,53~
    55,104,107~108,112~113,123~134
    ,136~142
    11156 8brm:LE
    (3.33Å)
    		 117 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00026813A5 RF00001 Giardia
    lamblia
    ATCC
    50803
    184922    		 36912103 Assembly1
    rna:Lt:1~2691 78~81,85,89,98~99,101~103
    11157 8brm:Lt
    (3.33Å)
    		 2594 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0002681395 RF02543 Giardia
    lamblia
    ATCC
    50803
    184922    		 36912103 Assembly1
    rna:LD:1~142 1~22,58,123,280~281,283~288,29
    0~297,300,302~303,320~321,354~
    369,404~405,1083~1084,1107~110
    8,1129,1214,1240,1257,1465~146
    7,1873~1875
    rna:LE:2~118 711~714,764~769,866,881,902~90
    3
    rna:St:1~1454 563~565,1553,1567~1568,1613~16
    14,1679,1683~1684,1694~1696,17
    43~1745,1747,1750~1751,1778~17
    80,1790~1792,1818
    11158 8brm:St
    (3.33Å)
    		 1454 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00026813B3 RF01960
    RF02542
    RF01959
    RF00177    		 Giardia
    lamblia
    ATCC
    50803
    184922    		 36912103 Assembly1
    rna:Lt:1~2691 508~509,667,725~727,748~749,86
    7,1332~1334,1343~1345,1355,139
    3,1401~1402,1411~1414,1435
    11159 8bsi:LD
    (3.4Å)
    		 137 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000268138A RF00002 Giardia
    intestinalis
    5741    		 36912103 Assembly1
    rna:Lt:1~2691 3~7,9~14,16~23,25~32,34~38,41~
    42,53~55,104,107~108,112~113,1
    23~134,136~141
    11160 8bsi:LE
    (3.4Å)
    		 115 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00026813A5 RF00001 Giardia
    intestinalis
    5741    		 36912103 Assembly1
    rna:Lt:1~2691 78~81,85,89,98~99,101~103
    11161 8bsi:Lt
    (3.4Å)
    		 2593 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0002681395 RF02543 Giardia
    intestinalis
    5741    		 36912103 Assembly1
    rna:LD:3~141 1~22,58,123,280~281,283~288,29
    0~293,296~297,300,302~303,320~
    321,354~358,360~369,404~405,10
    83~1084,1107~1108,1129,1214,12
    40,1257,1465~1467,1874
    rna:LE:4~118 711~714,765~769,866,881,902~90
    3
    rna:Lu:1~75 1698~1700,1723~1724,1942,1970,
    2188~2189,2216~2217
    rna:St:1~1454 563~565,1567,1614,1679,1683~16
    84,1695,1743~1747,1750~1751,17
    78~1780,1790~1792
    11162 8bsi:Lu
    (3.4Å)
    		 75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS0000326EAC RF00005 Giardia
    intestinalis
    5741    		 36912103 Assembly1
    rna:Lt:1~2691 2~4,18,55,69~70,74~75
    rna:St:1~1454 29~31,33,36,39~40
    rna:y:31~41 33~36
    11163 8bsi:St
    (3.4Å)
    		 1454 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00026813B3 RF01960
    RF02542
    RF01959
    RF00177    		 Giardia
    intestinalis
    5741    		 36912103 Assembly1
    rna:Lt:1~2691 508~509,667,725~727,748~749,86
    7,1332~1334,1343~1345,1355,140
    1~1402,1410~1414,1435
    rna:Lu:1~75 754,935,1168,1263~1266
    rna:y:31~41 457,658,894,933,1016,1133,1135
    ,1323,1325,1423~1424
    11164 8bsi:y
    (3.4Å)
    		 11 N/A N/A N/A Giardia
    intestinalis
    5741    		 36912103 Assembly1
    rna:Lu:1~75 31~32,34~35
    rna:St:1~1454 31~39,41
    11165 8bsj:LD
    (6.49Å)
    		 140 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000268138A RF00002 Giardia
    intestinalis
    5741    		 36912103 Assembly1
    rna:Lt:1~2691 2~3,5~23,25~38,41~42,54~55,76,
    104,107~108,112~113,123~134,13
    6~141
    11166 8bsj:LE
    (6.49Å)
    		 116 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00026813A5 RF00001 Giardia
    intestinalis
    5741    		 36912103 Assembly1
    rna:Lt:1~2691 78~80,85,89,98~99,101~103
    11167 8bsj:Lt
    (6.49Å)
    		 2593 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0002681395 RF02543 Giardia
    intestinalis
    5741    		 36912103 Assembly1
    rna:LD:2~141 2~22,58,123,280~281,283~288,29
    0~293,295~297,300,302~303,320~
    321,354~369,404~405,1083~1084,
    1107~1108,1129,1213~1214,1240,
    1257,1465~1467,1874
    rna:LE:3~118 711~714,764~769,881,903
    rna:St:1~1454 563~565,1566~1568,1614,1679,16
    83,1694~1695,1743~1747,1750~17
    51,1778~1780,1790~1792
    rna:u:1~75 1698~1700,1722~1724,1942~1943,
    1951~1952,1970,2188~2189,2216~
    2217
    rna:v:1~75 1739~1740,1754~1755,1893,2043~
    2045,2047,2242~2243,2392~2393
    rna:x:1~74 1744,2261~2262,2274,2299,2345,
    2347,2374~2376
    11168 8bsj:St
    (6.49Å)
    		 1454 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00026813B3 RF01960
    RF02542
    RF01959
    RF00177    		 Giardia
    intestinalis
    5741    		 36912103 Assembly1
    rna:Lt:1~2691 508~509,667,725~727,748,867,13
    32~1334,1343~1345,1355,1391,14
    01~1403,1411~1414,1435
    rna:u:1~75 905~906,1265~1266,1307~1308
    rna:v:1~75 755,935,1168~1169,1263~1266,13
    25
    rna:x:1~74 457,1016,1411
    rna:y:31~41 658,894,1016,1133,1322,1325~13
    26,1328,1411,1416,1423
    11169 8bsj:u
    (6.49Å)
    		 75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS0000326EAC RF00005 Giardia
    intestinalis
    5741    		 36912103 Assembly1
    rna:Lt:1~2691 2~4,18~19,55~56,69~71,74~75
    rna:St:1~1454 33~35
    rna:y:31~41 35~36
    11170 8bsj:v
    (6.49Å)
    		 75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS0000326EAC RF00005 Giardia
    intestinalis
    5741    		 36912103 Assembly1
    rna:Lt:1~2691 2~3,12~13,23,72~75
    rna:St:1~1454 29~31,33,37~40
    rna:y:31~41 33~36
    11171 8bsj:x
    (6.49Å)
    		 74 N/A URS00026813D2 N/A Giardia
    intestinalis
    5741    		 36912103 Assembly1
    rna:Lt:1~2691 36~37,50~51,61~62,72~74
    rna:St:1~1454 33~36
    rna:y:31~41 33~36
    11172 8bsj:y
    (6.49Å)
    		 11 N/A N/A N/A Giardia
    intestinalis
    5741    		 36912103 Assembly1
    rna:St:1~1454 31,33~38,40~41
    rna:u:1~75 31~32
    rna:v:1~75 34~36
    rna:x:1~74 37~40
    11173 8btd:LD
    (4.9Å)
    		 142 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000268138A RF00002 Giardia
    lamblia
    ATCC
    50803
    184922    		 36912103 Assembly1
    rna:Lt:1~2691 1~23,25~38,41,53~55,104,108,11
    2~113,123~134,136~142
    11174 8btd:LE
    (4.9Å)
    		 117 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00026813A5 RF00001 Giardia
    lamblia
    ATCC
    50803
    184922    		 36912103 Assembly1
    rna:Lt:1~2691 78~80,89,98~103
    11175 8btd:Lt
    (4.9Å)
    		 2593 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0002681395 RF02543 Giardia
    lamblia
    ATCC
    50803
    184922    		 36912103 Assembly1
    rna:LD:1~142 1~22,58,123,280~288,290~293,29
    5~297,300,302~303,320~321,354~
    358,360~369,404,1083~1084,1107
    ~1108,1129,1214,1240,1257,1465
    ~1467,1873~1875
    rna:LE:2~118 711~714,765,767~769,902~903
    rna:St:1~1454 563~564,1613~1614,1743~1744,17
    46~1748,1750~1751,1778~1781,17
    90~1792
    rna:u:1~75 1698~1699,1722~1724,1942,1970,
    2188~2190,2216~2217
    rna:v:1~75 1744,1772~1774,1894,2043~2044,
    2393~2394
    11176 8btd:St
    (4.9Å)
    		 1454 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00026813B3 RF01960
    RF02542
    RF01959
    RF00177    		 Giardia
    lamblia
    ATCC
    50803
    184922    		 36912103 Assembly1
    rna:Lt:1~2691 508,725~727,1332~1334,1343~134
    5,1401~1402,1411~1413,1435
    rna:u:1~75 755,935,1263~1265,1325
    rna:v:1~75 457~458,1016,1411
    rna:y:31~40 457,658,894,1133,1322,1325~132
    7,1410~1411,1416
    11177 8btd:u
    (4.9Å)
    		 75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS0000326EAC RF00005 Giardia
    lamblia
    ATCC
    50803
    184922    		 36912103 Assembly1
    rna:Lt:1~2691 3~4,18,55,69~71,74~75
    rna:St:1~1454 29~31,33,37~41
    rna:y:31~40 33~36
    11178 8btd:v
    (4.9Å)
    		 75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00026813BC RF00005 Giardia
    lamblia
    ATCC
    50803
    184922    		 36912103 Assembly1
    rna:Lt:1~2691 36~37,71~75
    rna:St:1~1454 33~36
    rna:y:31~40 33~36
    11179 8btd:y
    (4.9Å)
    		 10 N/A N/A N/A Giardia
    lamblia
    ATCC
    50803
    184922    		 36912103 Assembly1
    rna:St:1~1454 31,33~40
    rna:u:1~75 34~36
    rna:v:1~75 37~39
    11180 8btk:A2
    (3.5Å)
    		 1770 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00023119C9 RF01960
    RF02542
    RF01959
    RF00177    		 Oryctolagus
    cuniculus
    9986    		 37170030 Assembly1
    rna:B5:1~4808 678~679,971,1030~1031,1052~105
    3,1181,1709~1711,1720~1722,173
    2,1816~1817,1825~1829,1850
    rna:AH:3460~3463 1208,1702~1703,1831
    rna:AT:1~75 1059,1249,1525~1526,1640~1642,
    1702
    11181 8btk:AT
    (3.5Å)
    		 75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS0002681408 RF00005 Oryctolagus
    cuniculus
    9986    		 37170030 Assembly1
    rna:B5:1~4808 73~75
    rna:A2:1~1870 30~32,34,38~41
    rna:AH:3460~3463 34~37
    11182 8btk:B5
    (3.5Å)
    		 3764 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000231197F RF02543 Oryctolagus
    cuniculus
    9986    		 37170030 Assembly1
    rna:B7:2~120 1675~1677,1680,1731,1733~1734,
    1833,1848,1875,1881
    rna:B8:1~156 1~22,58,146,193,339,341~348,35
    0~353,356~357,360,362,379~380,
    409,415~430,1248~1249,1277~127
    8,1315,2151~2152,2155,2176~217
    7,2198,2287,2315,2329~2331,233
    6,2351~2352,2387,2389,2621~262
    3,3622,4318
    rna:A2:1~1870 1518~1519,2727,3361,3427,3431~
    3432,3444,3491~3492,3494~3495,
    3498~3499,3526~3528,3538~3539
    rna:AT:1~75 3502,3942~3944,3946,4142~4143,
    4294
    11183 8btk:B7
    (3.5Å)
    		 119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000002B0D5 RF00001 Oryctolagus
    cuniculus
    9986    		 37170030 Assembly1
    rna:B5:1~4808 77~79,84,88,98,100~101,103
    11184 8btk:B8
    (3.5Å)
    		 156 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00023119A4 RF00002
    RF02540    		 Oryctolagus
    cuniculus
    9986    		 37170030 Assembly1
    rna:B5:1~4808 1,3~22,24~37,40~41,53~54,68,10
    3,108,110~113,124~125,127,136,
    138~149,151,153~156
    11185 8btr:LD
    (3.25Å)
    		 142 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000268138A RF00002 Giardia
    lamblia
    ATCC
    50803
    184922    		 36912103 Assembly1
    rna:Lt:1~2691 1~7,9~23,25~32,34~38,41~42,53~
    55,104,107~108,112~113,123~134
    ,136~142
    11186 8btr:LE
    (3.25Å)
    		 117 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00026813A5 RF00001 Giardia
    lamblia
    ATCC
    50803
    184922    		 36912103 Assembly1
    rna:Lt:1~2691 78~81,85,89,98~99,101~103
    11187 8btr:Lt
    (3.25Å)
    		 2593 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0002681395 RF02543 Giardia
    lamblia
    ATCC
    50803
    184922    		 36912103 Assembly1
    rna:LD:1~142 1~22,58,123,280~281,283~288,29
    0~293,296~297,300,303,320~321,
    354~369,404~405,1083~1084,1107
    ~1108,1129,1214,1240,1257,1465
    ~1467,1873~1875
    rna:LE:2~118 711~714,765~769,881,903
    rna:St:1~1454 563~565,1614,1693,1743~1747,17
    50~1751,1778~1780,1790~1792
    rna:u:1~75 1698~1700,1723~1724,1942,1970,
    2188~2190,2216~2217
    rna:v:1~75 1744,1893,2043~2045,2102,2242~
    2243,2393
    11188 8btr:St
    (3.25Å)
    		 1454 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00026813B3 RF01960
    RF02542
    RF01959
    RF00177    		 Giardia
    lamblia
    ATCC
    50803
    184922    		 36912103 Assembly1
    rna:Lt:1~2691 508,667,725~727,1332~1335,1343
    ~1345,1401~1403,1411~1413,1435
    rna:u:1~75 755,935,1168~1169,1263~1266,13
    25
    rna:v:1~75 457,1016,1411
    rna:y:31~41 457,658,894,1133,1322,1325~132
    6,1328,1410~1411,1416
    11189 8btr:u
    (3.25Å)
    		 75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS0000326EAC RF00005 Giardia
    lamblia
    ATCC
    50803
    184922    		 36912103 Assembly1
    rna:Lt:1~2691 3~4,18,55,69~70,74~75
    rna:St:1~1454 29~31,33,37~40
    rna:y:31~41 33~36
    11190 8btr:v
    (3.25Å)
    		 75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00026813BC RF00005 Giardia
    lamblia
    ATCC
    50803
    184922    		 36912103 Assembly1
    rna:Lt:1~2691 18,36~37,55,73~75
    rna:St:1~1454 33~36
    rna:y:31~41 33~36
    11191 8btr:y
    (3.25Å)
    		 11 N/A N/A N/A Giardia
    lamblia
    ATCC
    50803
    184922    		 36912103 Assembly1
    rna:St:1~1454 31,33~41
    rna:u:1~75 34~36
    rna:v:1~75 37~40
    11192 8buu:A
    (2.9Å)
    		 2852 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00026813E0 RF02541 Bacillus
    subtilis
    subsp.
    subtilis
    str.
    168
    224308    		 36951104 Assembly1
    rna:B:3~114 908~910,962~966,1004
    rna:V:2~74 1936~1938,1951~1953
    rna:a:8~1550 1748~1749,1875~1876,1941~1945,
    1948~1949,1976~1979,1988~1990
    11193 8buu:B
    (2.9Å)
    		 112 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001CC3E3 RF00001 Bacillus
    subtilis
    subsp.
    subtilis
    str.
    168
    224308    		 36951104 Assembly1
    rna:A:3~2925 76~79,87,94~95,97~98
    11194 8buu:V
    (2.9Å)
    		 73 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00004A5E97 RF00005 Bacillus
    subtilis
    subsp.
    subtilis
    str.
    168
    224308    		 36951104 Assembly1
    rna:A:3~2925 11~13,25~26
    rna:u:1~15 35~38
    rna:a:8~1550 31~33,35,39,41~42
    11195 8buu:a
    (2.9Å)
    		 1538 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001B4049 RF01959
    RF00177
    RF02542
    RF01960    		 Bacillus
    subtilis
    subsp.
    subtilis
    str.
    168
    224308    		 36951104 Assembly1
    rna:A:3~2925 711,1416~1418,1427~1429,1438,1
    493~1494,1503~1506,1527
    rna:V:2~74 799,976,1238~1239,1347~1350,14
    09
    rna:u:1~15 936,1409~1410,1508,1544~1550
    11196 8c3a:1
    (3.0Å)
    		 3217 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000C2FD9C RF02543 Candida
    albicans
    5476    		 N/A Assembly1
    rna:3:1~121 992~994,1048,1050~1052,1152,11
    67,1193,1199
    rna:4:1~157 3~22,58,142,182,235~236,330~33
    7,339~342,345~346,349,351,368~
    369,404~419,654~655,689,1390~1
    391,1394,1415~1416,1437,1526,1
    557,1580~1581,1613~1616,1826~1
    828,2364,2557,2966~2967
    rna:B:1~1785 842~843,1931,2103,2169,2173~21
    74,2185~2186,2233~2234,2236~22
    37,2240~2241,2268~2270,2280~22
    82
    11197 8c3a:3
    (3.0Å)
    		 121 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001B6144 RF00001 Candida
    albicans
    5476    		 N/A Assembly1
    rna:1:3~3361 79~82,86,90,100,102~103
    11198 8c3a:4
    (3.0Å)
    		 157 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000082EA4 RF00002 Candida
    albicans
    5476    		 N/A Assembly1
    rna:1:3~3361 1~22,24~33,35~37,40,53~54,68,9
    5,104,109,112~115,117,125~126,
    129,136~156
    11199 8c3a:AS
    (3.0Å)
    		 3229 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000C2FD9C RF02543 Candida
    albicans
    5476    		 N/A Assembly2
    rna:AT:1~121 992~995,1048,1050~1052,1152,11
    67,1193,1199
    rna:AU:1~158 3~22,58,142,235~236,330~337,33
    9~342,345~346,349,351,368~369,
    404~419,654~655,689,1390~1391,
    1394,1415~1416,1437,1526~1527,
    1554,1557,1580~1581,1614~1615,
    1826~1828,2364,2557,2966~2967
    rna:CM:1~1785 842~844,1931~1932,2103,2173,21
    85,2233~2234,2236~2237,2240~22
    41,2268~2270,2280~2282,2308
    11200 8c3a:AT
    (3.0Å)
    		 121 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001B6144 RF00001 Candida
    albicans
    5476    		 N/A Assembly2
    rna:AS:3~3361 79~82,86,90,100,102~104
    << < 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 > >>
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    Reference:
  • Chengxin Zhang, Lydia Freddolino (2024) "FURNA: a database for function annotations of RNA structures," PLOS Biology 22(7): e3002476.