SEQ2FUN

FURNA
Download all results in tab-seperated text for 14210 RNAs.
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  • Hover over Ligand to view the name of the ligand and the ligand-binding nucleotides on the RNA.

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    # PDB
    (Resolution)    		 Length EC number
    & GO term     		RNAcentral Rfam Taxon PubMed ATtRACT
    motif     		Ligand &
    binding nucleotides
    11301 8civ:BB
    (2.47Å)
    		 121 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000055688D RF00001 Saccharomyces
    cerevisiae
    4932    		 38030725 Assembly1
    rna:AA:3~3396 79~82,86,90,100,102~104
    11302 8civ:Bb
    (2.47Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000011107D RF00005 Saccharomyces
    cerevisiae
    4932    		 38030725 Assembly1
    rna:AA:3~3396 3,11,74~76
    rna:Dd:19~24 34~37
    rna:c:1~1799 30,33~34,38~39
    11303 8civ:CC
    (2.47Å)
    		 158 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001BF64E RF00002 Saccharomyces
    cerevisiae
    4932    		 38030725
    441    		 Assembly1
    rna:AA:3~3396 1~22,24~33,35~37,40~41,53~54,1
    04,109,112~115,125~126,129,136
    ~157
    11304 8civ:Cc
    (2.47Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000057545F RF00005 Escherichia
    coli
    562    		 38030725 Assembly1
    rna:AA:3~3396 3~4,20,57,71~72,76~77
    rna:Dd:19~24 35~38
    rna:c:1~1799 31~33,35,42
    11305 8civ:c
    (2.47Å)
    		 1622 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000268149F RF01960
    RF02542
    RF01959
    RF00177    		 Saccharomyces
    cerevisiae
    4932    		 38030725
    101

    M080_0.6

    386

    M107_0.6

    497

    490    		 Assembly1
    rna:AA:3~3396 320,628~629,913,971~973,994~99
    5,1123,1644~1646,1655~1657,166
    7,1746~1747,1756~1759,1780
    rna:Bb:1~76 1001,1179,1191,1637
    rna:Cc:1~77 1191,1575~1578
    rna:Dd:19~24 904,1000,1150,1637~1638,1640,1
    761
    11306 8cku:AA
    (3.11Å)
    		 3190 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000061F377 RF02543 Saccharomyces
    cerevisiae
    4932    		 38030725
    M107_0.6

    M080_0.6

    M299_0.6

    16    		 Assembly1
    rna:BB:1~121 996~999,1052,1054~1056,1171,11
    97,1203
    rna:Bb:1~76 2256,2619,2678,2820,2971
    rna:CC:1~158 3~23,59,143,330~337,339~342,34
    4~346,349,351,368~369,404~419,
    656~657,691,1394~1395,1399,141
    9~1420,1441~1442,1530,1558,158
    4~1585,1618~1620,1830~1832,238
    6,2585,2994~2995
    rna:Cc:1~77 2454,2484,2764,2793~2794
    rna:c:1~1799 846~848,1919,2125,2206~2207,22
    55~2259,2262~2263,2290~2292,23
    02~2304
    11307 8cku:BB
    (3.11Å)
    		 121 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000055688D RF00001 Saccharomyces
    cerevisiae
    4932    		 38030725 Assembly1
    rna:AA:3~3396 79~82,86,90,100,102~104
    11308 8cku:Bb
    (3.11Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000011107D RF00005 Saccharomyces
    cerevisiae
    4932    		 38030725 Assembly1
    rna:AA:3~3396 37,56,75~76
    rna:Dd:13~25 34~37
    rna:c:1~1799 34~37
    11309 8cku:CC
    (3.11Å)
    		 158 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001BF64E RF00002 Saccharomyces
    cerevisiae
    4932    		 38030725
    441    		 Assembly1
    rna:AA:3~3396 1~22,24~37,40,53~54,104,106,10
    9,112~115,125~126,129,136~152,
    154~158
    11310 8cku:Cc
    (3.11Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000057545F RF00005 Escherichia
    coli
    562    		 38030725 Assembly1
    rna:AA:3~3396 20,57,77
    rna:Dd:13~25 35~38
    rna:c:1~1799 32~33,35,39~41,43
    11311 8cku:Dd
    (3.11Å)
    		 13 N/A N/A N/A Saccharomyces
    cerevisiae
    4932    		 38030725 Assembly1
    rna:Bb:1~76 22~25
    rna:Cc:1~77 19~21
    rna:c:1~1799 15~16,18~24
    11312 8cku:c
    (3.11Å)
    		 1604 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000268149C RF01960
    RF02542
    RF01959
    RF00177    		 Saccharomyces
    cerevisiae
    4932    		 38030725
    101

    M080_0.6

    386

    M107_0.6

    497

    490    		 Assembly1
    rna:AA:3~3396 320,628~629,913,972~973,1644~1
    646,1655~1657,1746~1747,1757~1
    758,1780
    rna:Bb:1~76 577,1274,1756
    rna:Cc:1~77 1001,1191,1463,1575~1577,1637
    rna:Dd:13~25 577,904,1150,1637~1638,1640,17
    55~1756,1761
    11313 8cmj:AA
    (3.79Å)
    		 3197 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000061F377 RF02543 Saccharomyces
    cerevisiae
    4932    		 38030725
    M107_0.6

    M080_0.6

    M299_0.6

    16    		 Assembly1
    rna:BB:1~121 996~999,1052,1054~1056,1171,11
    97,1203
    rna:CC:1~158 3~23,59,143,330~337,339~342,34
    5~346,349,351,368~369,404~419,
    656~657,691,1394~1395,1398~139
    9,1419~1420,1530,1558,1618~161
    9,1830~1832,2386,2585,2994~299
    5
    rna:c:1~1799 846~847,1935,2196,2208,2255~22
    56,2258~2259,2262~2263,2290~22
    91,2302~2304,2330
    11314 8cmj:BB
    (3.79Å)
    		 121 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000055688D RF00001 Saccharomyces
    cerevisiae
    4932    		 38030725 Assembly1
    rna:AA:3~3396 79~82,86,90,100,102~104
    11315 8cmj:CC
    (3.79Å)
    		 158 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001BF64E RF00002 Saccharomyces
    cerevisiae
    4932    		 38030725
    441    		 Assembly1
    rna:AA:3~3396 1~22,24~37,40~41,53~54,104,112
    ~115,125~126,129,136~155,157~1
    58
    11316 8cmj:c
    (3.79Å)
    		 1608 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000268149C RF01960
    RF02542
    RF01959
    RF00177    		 Saccharomyces
    cerevisiae
    4932    		 38030725
    101

    M080_0.6

    386

    M107_0.6

    497

    490    		 Assembly1
    rna:AA:3~3396 628~629,913,971~972,995,1644~1
    646,1655,1657,1667,1746~1747,1
    756~1759,1780
    11317 8cq7:1
    (3.2Å)
    		 3216 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02540
    RF02541
    RF02543    		 Candida
    albicans
    5476    		 N/A Assembly1
    rna:3:1~121 992~994,1048,1050~1052,1152,11
    67,1193,1199
    rna:4:1~157 3~22,58,142,182,235~236,330~33
    7,339~342,345~346,349,351,368~
    369,404~419,654~655,689,1390~1
    391,1394,1415,1437,1526,1557,1
    580~1581,1614~1616,1826~1828,2
    364,2557,2966~2967
    rna:B:1~1785 842~843,1931~1932,2103,2169,21
    73~2174,2185~2186,2233~2234,22
    36~2237,2240~2241,2268~2270,22
    80~2282
    11318 8cq7:3
    (3.2Å)
    		 121 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00001 Candida
    albicans
    5476    		 N/A Assembly1
    rna:1:3~3361 79~82,86,90,100,102~103
    11319 8cq7:4
    (3.2Å)
    		 157 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000082EA4 RF00002 Candida
    albicans
    5476    		 N/A Assembly1
    rna:1:3~3361 1~22,24~33,35~37,40,53~54,68,9
    5,104,109,113~115,117,125~126,
    129,136~156
    11320 8cq7:AS
    (3.2Å)
    		 3222 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02540
    RF02541
    RF02543    		 Candida
    albicans
    5476    		 N/A Assembly2
    rna:AT:1~121 992~995,1048,1050~1052,1152,11
    67,1193,1199
    rna:AU:1~158 3~22,58,142,235~236,330~337,33
    9~342,345~346,349,351,368~369,
    404~419,654~655,689,1390~1391,
    1394,1415~1416,1437,1526~1527,
    1554,1557,1580~1581,1614~1616,
    1826~1828,2364,2557,2966~2967
    rna:CM:1~1785 842~844,1931~1932,2103,2173~21
    74,2185,2233~2234,2236~2237,22
    40~2241,2268~2270,2280~2282,23
    08
    11321 8cq7:AT
    (3.2Å)
    		 121 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00001 Candida
    albicans
    5476    		 N/A Assembly2
    rna:AS:3~3361 79~82,86,90,100,102~104
    11322 8cq7:AU
    (3.2Å)
    		 158 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00002 Candida
    albicans
    5476    		 N/A Assembly2
    rna:AS:3~3361 1~22,24~33,35~37,40,53~54,95,1
    04,109,112~115,117,125~126,129
    ,136~156
    11323 8cq7:B
    (3.2Å)
    		 1756 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF01960
    RF02542
    RF01959
    RF00177    		 Candida
    albicans
    5476    		 N/A Assembly1
    rna:1:3~3361 626~627,898~899,956~958,979~98
    0,1108,1631~1633,1642~1644,165
    4~1655,1733~1734,1742,1744~174
    6,1767
    11324 8cq7:CM
    (3.2Å)
    		 1765 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000059AE3B RF01960
    RF02542
    RF01959
    RF00177    		 Candida
    albicans
    5476    		 N/A Assembly2
    rna:AS:3~3361 626~627,898,956~958,979~980,11
    08,1631~1633,1642~1644,1654~16
    55,1733~1734,1742,1744~1746,17
    67
    11325 8cqw:1
    (3.05Å)
    		 3208 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02540
    RF02541
    RF02543    		 Candida
    albicans
    5476    		 N/A Assembly1
    rna:3:1~121 992~994,1048,1050~1052,1152,11
    67,1193,1199
    rna:4:1~157 3~22,58,142,182,235~236,330~33
    7,339~342,345~346,349,351,368~
    369,404~419,654~655,689,1390~1
    391,1394,1415,1437,1526,1557,1
    580~1581,1614~1616,1826~1828,2
    364,2557,2966~2967
    rna:B:1~1785 842~844,1931,2169,2173~2174,21
    85~2186,2233~2234,2236~2237,22
    40~2241,2268~2270,2280~2282
    11326 8cqw:3
    (3.05Å)
    		 121 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00001 Candida
    albicans
    5476    		 N/A Assembly1
    rna:1:3~3361 79~82,86,90,100,102~103
    11327 8cqw:4
    (3.05Å)
    		 157 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000082EA4 RF00002 Candida
    albicans
    5476    		 N/A Assembly1
    rna:1:3~3361 1~22,24~33,35~37,40,53~54,68,9
    5,104,109,113~115,117,125~126,
    129,136~156
    11328 8cqw:AS
    (3.05Å)
    		 3227 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02540
    RF02541
    RF02543    		 Candida
    albicans
    5476    		 N/A Assembly2
    rna:AT:1~121 992~995,1048,1050~1052,1152,11
    67,1193,1199
    rna:AU:1~157 3~22,58,142,235~236,330~337,33
    9~342,345~346,349,351,368~369,
    404~419,654~655,689,1390~1391,
    1394,1415~1416,1437,1526~1527,
    1554,1557,1580~1581,1614~1616,
    1826~1828,2364,2557,2966~2967
    rna:CM:1~1785 842~844,1931~1932,2103,2173,21
    85,2233~2234,2236~2237,2240~22
    41,2268~2270,2280~2282
    11329 8cqw:AT
    (3.05Å)
    		 121 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00001 Candida
    albicans
    5476    		 N/A Assembly2
    rna:AS:3~3361 79~82,86,90,100,102~104
    11330 8cqw:AU
    (3.05Å)
    		 157 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000082EA4 RF00002 Candida
    albicans
    5476    		 N/A Assembly2
    rna:AS:3~3361 1~22,24~33,35~37,40,53~54,95,1
    04,109,113~115,117,125~126,129
    ,136~156
    11331 8cqw:B
    (3.05Å)
    		 1741 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF01960
    RF02542
    RF01959
    RF00177    		 Candida
    albicans
    5476    		 N/A Assembly1
    rna:1:3~3361 626~627,898~899,956~958,979~98
    0,1108,1631~1633,1642~1644,165
    4,1733~1734,1742~1746,1767
    11332 8cqw:CM
    (3.05Å)
    		 1765 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000059AE3B RF01960
    RF02542
    RF01959
    RF00177    		 Candida
    albicans
    5476    		 N/A Assembly2
    rna:AS:3~3361 626~627,898,956~958,979~980,11
    08,1631~1633,1642~1644,1654~16
    55,1733~1734,1742~1746,1767
    11333 8cre:1
    (3.0Å)
    		 3216 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02540
    RF02541
    RF02543    		 Candida
    albicans
    5476    		 N/A Assembly1
    rna:3:1~121 992~994,1048,1050~1052,1152,11
    67,1193,1199
    rna:4:1~157 3~22,58,142,182,235~236,330~33
    7,339~342,345~346,349,351,368~
    369,404~419,654~655,689,1390~1
    391,1394,1415,1437,1526,1557,1
    580~1581,1614~1616,1826~1828,2
    364,2557,2966~2967
    rna:B:1~1785 842~843,1931~1932,2103,2169,21
    73,2185~2186,2233~2234,2236~22
    37,2240~2241,2268~2270,2280~22
    82
    11334 8cre:3
    (3.0Å)
    		 121 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00001 Candida
    albicans
    5476    		 N/A Assembly1
    rna:1:3~3361 79~82,86,90,100,102~103
    11335 8cre:4
    (3.0Å)
    		 157 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000082EA4 RF00002 Candida
    albicans
    5476    		 N/A Assembly1
    rna:1:3~3361 1~22,24~33,35~37,40,53~54,68,9
    5,104,109,113~115,117,125~126,
    129,136~156
    11336 8cre:AS
    (3.0Å)
    		 3229 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000C2FD9C RF02540
    RF02541
    RF02543    		 Candida
    albicans
    5476    		 N/A Assembly2
    rna:AT:1~121 992~995,1048,1050~1052,1152,11
    67,1193,1199
    rna:AU:1~158 3~22,58,142,235~236,330~337,33
    9~342,345~346,349,351,368~369,
    404~419,654~655,689,1390~1391,
    1394,1415~1416,1437,1526~1527,
    1554,1557,1580~1581,1614~1616,
    1826~1828,2364,2557,2966~2967
    rna:CM:1~1785 842~844,1931~1932,2103,2173~21
    74,2185,2233~2234,2236~2237,22
    40~2241,2268~2270,2280~2282
    11337 8cre:AT
    (3.0Å)
    		 121 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00001 Candida
    albicans
    5476    		 N/A Assembly2
    rna:AS:3~3361 79~82,86,90,100,102~104
    11338 8cre:AU
    (3.0Å)
    		 158 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00002 Candida
    albicans
    5476    		 N/A Assembly2
    rna:AS:3~3361 1~22,24~33,35~37,40,53~54,95,1
    04,109,113~115,117,125~126,129
    ,136~156
    11339 8cre:B
    (3.0Å)
    		 1761 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000059AE3B RF01960
    RF02542
    RF01959
    RF00177    		 Candida
    albicans
    5476    		 N/A Assembly1
    rna:1:3~3361 626~627,898~899,956~958,979~98
    0,1108,1631~1633,1642~1644,165
    4,1733~1734,1743~1746,1767
    11340 8cre:CM
    (3.0Å)
    		 1765 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000059AE3B RF01960
    RF02542
    RF01959
    RF00177    		 Candida
    albicans
    5476    		 N/A Assembly2
    rna:AS:3~3361 626~627,898,956~958,979~980,11
    08,1631~1633,1642~1644,1654~16
    55,1733~1734,1743~1746,1767
    11341 8crx:A
    (2.78Å)
    		 1505 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000A1FB0E RF00177
    RF01959
    RF02542
    RF01960    		 Cutibacterium
    acnes
    1747    		 36864821 Assembly1
    rna:a:2~3080 684,766,883,1394~1396,1405,140
    7,1416~1417,1460~1461,1470~147
    1,1479,1481~1483,1504
    rna:Y:13~22 512,675,910,1039,1387~1389,148
    0~1481,1485,1492~1493
    rna:C:2~76 772,950,1215~1216,1324~1326,13
    87
    11342 8crx:C
    (2.78Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    562    		 36864821 Assembly1
    rna:A:6~1521 30~32,34,38~41
    rna:a:2~3080 11~13,24~25,74~76
    rna:Y:13~22 34~37
    11343 8crx:Y
    (2.78Å)
    		 10 N/A N/A N/A Escherichia
    coli
    562    		 36864821 Assembly1
    rna:A:6~1521 13~22
    rna:C:2~76 16~18
    11344 8crx:a
    (2.78Å)
    		 2903 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000268139D RF02541 Cutibacterium
    acnes
    1747    		 36864821 Assembly1
    rna:A:6~1521 1885~1888,2015,2020,2031,2095~
    2096,2098~2099,2102~2103,2130~
    2133,2142~2143
    rna:b:1~120 946~948,999,1001~1003,1041,111
    1
    rna:C:2~76 2090~2092,2105~2107,2246,2433~
    2435,2632~2633,2784
    11345 8crx:b
    (2.78Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000F006E4 RF00001 Cutibacterium
    acnes
    1747    		 36864821 Assembly1
    rna:a:2~3080 78~81,88,90,97~98,100~101
    11346 8cvj:1A
    (2.4Å)
    		 2871 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001698E8 RF02541 Thermus
    thermophilus
    HB8
    300852    		 36316410 Assembly1
    rna:1B:1~120 861~863,915,917~919,958
    rna:1a:4~1533 1702~1704,1832,1836~1837,1846,
    1848,1912~1913,1915~1916,1919~
    1920,1947~1949,1959~1961,2863~
    2864
    rna:1w:1~76 882,897,1913,2451~2452,2482~24
    83,2506~2507,2553~2555,2583~25
    85,2602
    rna:1x:1~76 1908~1909,1922~1924,2251~2253,
    2439,2450~2451,2601~2602
    rna:1y:1~76 1851~1852,2112,2169,2394~2395,
    2421~2422
    11347 8cvj:1B
    (2.4Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DEE8 RF00001 Thermus
    thermophilus
    HB8
    300852    		 36316410 Assembly1
    rna:1A:6~2897 78~81,90,98~101
    11348 8cvj:1a
    (2.4Å)
    		 1500 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DFED RF00177
    RF01959
    RF02542
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 36316410 Assembly1
    rna:1A:6~2897 702,783~784,899,1407~1409,1418
    ,1429,1442A,1473,1475,1483~148
    4,1494~1496,1517
    rna:1v:12~24 926,1196,1397,1400~1401,1492~1
    493,1498,1503,1507
    rna:1w:1~76 530,1054,1493
    rna:1x:1~76 790,966,1229~1230,1338~1341,14
    00
    11349 8cvj:1v
    (2.4Å)
    		 13 N/A N/A N/A Tequatrovirus
    T4
    10665    		 36316410 Assembly1
    rna:1a:4~1533 12~13,15~20,22~24
    rna:1w:1~76 19~21
    rna:1x:1~76 16~18
    11350 8cvj:1w
    (2.4Å)
    		 74 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    562    		 36316410 Assembly1
    rna:1A:6~2897 19,37~38,56,64,74~76
    rna:1a:4~1533 34~37
    rna:1v:12~24 34~37
    11351 8cvj:1x
    (2.4Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    562    		 36316410 Assembly1
    rna:1A:6~2897 11~13,24~25,74~76
    rna:1a:4~1533 30~32,34,38,40~41
    rna:1v:12~24 34~37
    11352 8cvj:1y
    (2.4Å)
    		 74 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    562    		 36316410 Assembly1
    rna:1A:6~2897 19,56,71,76
    11353 8cvj:2A
    (2.4Å)
    		 2800 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001698E8 RF02541 Thermus
    thermophilus
    HB8
    300852    		 36316410 Assembly2
    rna:2B:1~120 861~863,916~919,958
    rna:2a:4~1532 1689,1700~1704,1832,1836~1837,
    1846,1848,1912~1916,1919~1920,
    1947~1948,1959~1961,2863~2864
    rna:2w:2~76 897,1913,2451~2452,2482~2483,2
    506~2507,2553~2555,2583~2585,2
    602
    rna:2x:1~76 1907~1909,1922~1924,2251~2253,
    2450~2451,2601~2602
    rna:2y:1~76 1851,1885,2112,2169,2394~2395,
    2421~2422,2432
    11354 8cvj:2B
    (2.4Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DEE8 RF00001 Thermus
    thermophilus
    HB8
    300852    		 36316410 Assembly2
    rna:2A:6~2897 78~81,90,97~98,100~101
    11355 8cvj:2a
    (2.4Å)
    		 1503 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DFED RF00177
    RF01959
    RF02542
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 36316410 Assembly2
    rna:2A:6~2897 702,783~784,899,1407~1409,1418
    ,1429,1442A,1473~1475,1483~148
    4,1494~1496,1517
    rna:2v:12~24 530,926,1196,1397,1400~1402,14
    92~1493,1498,1503,1505,1507
    rna:2w:2~76 530,1054,1493
    rna:2x:1~76 790,966,1229~1230,1338~1340,14
    00
    11356 8cvj:2v
    (2.4Å)
    		 13 N/A N/A N/A Tequatrovirus
    T4
    10665    		 36316410 Assembly2
    rna:2a:4~1532 13,15~24
    rna:2w:2~76 19~21
    rna:2x:1~76 16~18
    11357 8cvj:2w
    (2.4Å)
    		 72 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    562    		 36316410 Assembly2
    rna:2A:6~2897 37~38,56,64,74~76
    rna:2a:4~1532 34~37
    rna:2v:12~24 34~37
    11358 8cvj:2x
    (2.4Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    562    		 36316410 Assembly2
    rna:2A:6~2897 11~13,24~25,74~76
    rna:2a:4~1532 30~32,34,38~41
    rna:2v:12~24 34~37
    11359 8cvj:2y
    (2.4Å)
    		 73 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    562    		 36316410 Assembly2
    rna:2A:6~2897 3,19,56,72,76
    rna:2x:1~76 35~36
    11360 8cvk:1A
    (2.5Å)
    		 2871 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001698E8 RF02541 Thermus
    thermophilus
    HB8
    300852    		 36316410 Assembly1
    rna:1B:1~120 861~863,915,917~919,958
    rna:1a:4~1533 1689,1700~1704,1832,1836~1837,
    1846,1848,1912~1913,1915~1916,
    1919~1920,1947~1949,1959~1961,
    2863~2864
    rna:1w:1~76 882,897,1913,2451~2452,2482~24
    83,2506~2507,2553~2555,2583~25
    85,2602
    rna:1x:1~76 1907~1909,1922~1924,2251~2253,
    2439,2450~2451,2601~2602
    rna:1y:1~76 1851~1852,1885,2112,2169,2394~
    2395,2421~2422,2432
    11361 8cvk:1B
    (2.5Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DEE8 RF00001 Thermus
    thermophilus
    HB8
    300852    		 36316410 Assembly1
    rna:1A:6~2897 78~81,90,97~101
    11362 8cvk:1a
    (2.5Å)
    		 1500 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DFED RF00177
    RF01959
    RF02542
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 36316410 Assembly1
    rna:1A:6~2897 702,783~784,899,1407~1409,1418
    ,1429,1442A,1473~1475,1483~148
    4,1494~1496,1517
    rna:1v:12~24 926,1196,1397,1400~1402,1492~1
    493,1498,1503,1505,1507
    rna:1w:1~76 530,1054,1493
    rna:1x:1~76 790,966,1229~1230,1338~1341,14
    00
    11363 8cvk:1v
    (2.5Å)
    		 13 N/A N/A N/A Tequatrovirus
    T4
    10665    		 36316410 Assembly1
    rna:1a:4~1533 12~13,15~20,22~24
    rna:1w:1~76 19~21
    rna:1x:1~76 16~18
    11364 8cvk:1w
    (2.5Å)
    		 74 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    562    		 36316410 Assembly1
    rna:1A:6~2897 19,37~38,56,64,74~76
    rna:1a:4~1533 34~37
    rna:1v:12~24 34~37
    11365 8cvk:1x
    (2.5Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    562    		 36316410 Assembly1
    rna:1A:6~2897 11~13,24~25,74~76
    rna:1a:4~1533 30~32,34,38,40~41
    rna:1v:12~24 34~37
    11366 8cvk:1y
    (2.5Å)
    		 74 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    562    		 36316410 Assembly1
    rna:1A:6~2897 19,56,71,76
    11367 8cvk:2A
    (2.5Å)
    		 2800 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001698E8 RF02541 Thermus
    thermophilus
    HB8
    300852    		 36316410 Assembly2
    rna:2B:1~120 861~864,915,917~918,958
    rna:2a:4~1532 1700~1704,1832,1836~1837,1846,
    1848,1912~1916,1919~1920,1947~
    1949,1959~1961,2863~2864
    rna:2w:2~76 881,897,1913,2451~2452,2482,25
    06~2507,2553~2555,2583~2585,26
    02
    rna:2x:1~76 1907~1909,1922~1924,2251~2253,
    2439,2450~2451,2601~2602
    rna:2y:1~76 1851~1852,1885,2112,2169,2394~
    2395,2421~2422,2432
    11368 8cvk:2B
    (2.5Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DEE8 RF00001 Thermus
    thermophilus
    HB8
    300852    		 36316410 Assembly2
    rna:2A:6~2897 78~81,90,97~98,100~102
    11369 8cvk:2a
    (2.5Å)
    		 1503 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DFED RF00177
    RF01959
    RF02542
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 36316410 Assembly2
    rna:2A:6~2897 702,783~784,899~900,1407~1409,
    1418,1429,1442A,1473~1475,1483
    ~1484,1494~1496,1517
    rna:2v:12~24 926,1196,1397,1400~1402,1492~1
    493,1498,1503,1505,1507
    rna:2w:2~76 530,1054,1493
    rna:2x:1~76 790,966,1229~1230,1338~1340,14
    00
    rna:2y:1~76 694~695
    11370 8cvk:2v
    (2.5Å)
    		 13 N/A N/A N/A Tequatrovirus
    T4
    10665    		 36316410 Assembly2
    rna:2a:4~1532 13,15~20,22~24
    rna:2w:2~76 19~21
    rna:2x:1~76 16~18
    11371 8cvk:2w
    (2.5Å)
    		 72 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    562    		 36316410 Assembly2
    rna:2A:6~2897 37~38,56,64,74~76
    rna:2a:4~1532 34~37
    rna:2v:12~24 34~37
    11372 8cvk:2x
    (2.5Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    562    		 36316410 Assembly2
    rna:2A:6~2897 11~13,24~25,74~76
    rna:2a:4~1532 30~32,34,38~41
    rna:2v:12~24 34~37
    11373 8cvk:2y
    (2.5Å)
    		 73 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    562    		 36316410 Assembly2
    rna:2A:6~2897 19,56,71~72,76
    rna:2a:4~1532 37~38
    rna:2x:1~76 35~36
    11374 8cvl:1A
    (2.3Å)
    		 2871 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001698E8 RF02541 Thermus
    thermophilus
    HB8
    300852    		 36316410 Assembly1
    rna:1B:1~120 861~864,915,917~919,958
    rna:1a:4~1533 1689,1700~1704,1832,1836~1837,
    1846,1848,1912~1916,1919~1920,
    1947~1949,1959~1961,2863~2864
    rna:1w:1~76 882,897,1913,2451~2452,2482~24
    83,2506~2507,2553~2555,2583~25
    85,2602
    rna:1x:1~76 1907~1909,1922~1924,2251~2253,
    2439,2450~2451,2601~2602
    rna:1y:1~76 1852,2112,2169,2394~2395,2421~
    2422,2432
    11375 8cvl:1B
    (2.3Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DEE8 RF00001 Thermus
    thermophilus
    HB8
    300852    		 36316410 Assembly1
    rna:1A:6~2897 78~81,90,97~98,100~102
    11376 8cvl:1a
    (2.3Å)
    		 1500 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DFED RF00177
    RF01959
    RF02542
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 36316410 Assembly1
    rna:1A:6~2897 702,783~784,899~900,1407~1409,
    1418,1429~1430,1442A,1473~1475
    ,1483~1484,1494~1496,1517
    rna:1v:12~24 926,1196,1397,1400~1402,1492~1
    493,1498,1503,1505,1507
    rna:1w:1~76 530,1054,1493
    rna:1x:1~76 790,966,1229~1230,1338~1341,14
    00
    11377 8cvl:1v
    (2.3Å)
    		 13 N/A N/A N/A Tequatrovirus
    T4
    10665    		 36316410 Assembly1
    rna:1a:4~1533 12~13,15~20,22~24
    rna:1w:1~76 19~21
    rna:1x:1~76 16~18
    11378 8cvl:1w
    (2.3Å)
    		 74 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    562    		 36316410 Assembly1
    rna:1A:6~2897 19,37~38,55~56,63~64,74~76
    rna:1a:4~1533 34~37
    rna:1v:12~24 34~37
    11379 8cvl:1x
    (2.3Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    562    		 36316410 Assembly1
    rna:1A:6~2897 11~13,24~25,74~76
    rna:1a:4~1533 29~32,34,38,40~41
    rna:1v:12~24 34~37
    11380 8cvl:1y
    (2.3Å)
    		 74 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    562    		 36316410 Assembly1
    rna:1A:6~2897 19,56,71~72,76
    11381 8cvl:2A
    (2.3Å)
    		 2800 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001698E8 RF02541 Thermus
    thermophilus
    HB8
    300852    		 36316410 Assembly2
    rna:2B:1~120 861~864,915~919,958
    rna:2a:4~1532 1689,1700~1704,1832,1836~1837,
    1846,1848,1912~1916,1919~1920,
    1947~1948,1959~1961,2863~2864
    rna:2w:2~76 881,897,1913,2451~2452,2482,25
    06~2507,2553~2555,2583~2585,26
    02
    rna:2x:1~76 1907~1909,1922~1924,2251~2253,
    2439,2450~2451,2601~2602
    rna:2y:1~76 1851~1852,1885,2112,2169,2394~
    2395,2421~2422
    11382 8cvl:2B
    (2.3Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DEE8 RF00001 Thermus
    thermophilus
    HB8
    300852    		 36316410 Assembly2
    rna:2A:6~2897 78~81,90,97~98,100~102
    11383 8cvl:2a
    (2.3Å)
    		 1503 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DFED RF00177
    RF01959
    RF02542
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 36316410 Assembly2
    rna:2A:6~2897 702,783~784,899~900,1407~1409,
    1418,1429~1430,1442A,1473~1475
    ,1483~1484,1493~1496,1517
    rna:2v:12~24 926,1196,1397,1400~1402,1498,1
    503,1505,1507
    rna:2w:2~76 530,1054,1493
    rna:2x:1~76 790,966,1229~1230,1338~1340,14
    00
    rna:2y:1~76 693~694
    11384 8cvl:2v
    (2.3Å)
    		 13 N/A N/A N/A Tequatrovirus
    T4
    10665    		 36316410 Assembly2
    rna:2a:4~1532 12~13,15~18,22~24
    rna:2w:2~76 19~21
    rna:2x:1~76 16~18
    11385 8cvl:2w
    (2.3Å)
    		 72 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    562    		 36316410 Assembly2
    rna:2A:6~2897 37~38,56,64,74~76
    rna:2a:4~1532 34~37
    rna:2v:12~24 34~37
    11386 8cvl:2x
    (2.3Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    562    		 36316410 Assembly2
    rna:2A:6~2897 11~13,24~25,74~76
    rna:2a:4~1532 30~32,34,38~41
    rna:2v:12~24 34~37
    11387 8cvl:2y
    (2.3Å)
    		 73 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    562    		 36316410 Assembly2
    rna:2A:6~2897 3~4,19,56,71~72,76
    rna:2a:4~1532 37~38
    11388 8cvm:C
    (2.66Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    562    		 36864821 Assembly1
    rna:a:2~3080 11~13,24~25,74~76
    11389 8cvm:a
    (2.66Å)
    		 2903 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000268139D RF02541 Cutibacterium
    acnes
    1747    		 36864821 Assembly1
    rna:b:1~120 946~948,999,1001~1003,1041,111
    1
    rna:C:2~76 2090~2092,2105~2107,2246,2433~
    2435,2632~2633,2784
    11390 8cvm:b
    (2.66Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000F006E4 RF00001 Cutibacterium
    acnes
    1747    		 36864821 Assembly1
    rna:a:2~3080 78~81,88,90,97~98,100~101
    11391 8cwo:A
    (2.84Å)
    		 1034 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000A1FB0E RF00177
    RF01959
    RF02542
    RF01960    		 Cutibacterium
    acnes
    1747    		 36864821 Assembly1
    rna:Y:13~22 512,675,1387~1389,1480~1481,14
    85,1492~1493
    11392 8cwo:Y
    (2.84Å)
    		 10 N/A N/A N/A Escherichia
    coli
    562    		 36864821 Assembly1
    rna:A:6~1521 13~20,22
    11393 8d1v:J
    (2.82Å)
    		 34 N/A URS0002617747 N/A Desulfonema
    ishimotonii
    45657    		 36190192 Assembly1
    rna:N:6~23 18,20~24,26~34
    11394 8d1v:N
    (2.82Å)
    		 18 N/A URS0002617751 N/A Desulfonema
    ishimotonii
    45657    		 36190192 Assembly1
    rna:J:1~34 6~7,9~14,16~20,22~23
    11395 8d4a:B
    (2.74Å)
    		 41 N/A URS0002681378 N/A synthetic
    construct
    32630    		 36599980 Assembly1
    rna:C:-2~25 23~44
    11396 8d4a:C
    (2.74Å)
    		 28 N/A URS0002681376 N/A synthetic
    construct
    32630    		 36599980 Assembly1
    rna:B:4~44 -2~20
    11397 8d4b:B
    (2.92Å)
    		 41 N/A URS0002681378 N/A synthetic
    construct
    32630    		 36599980 Assembly1
    rna:C:-2~25 22~44
    11398 8d4b:C
    (2.92Å)
    		 28 N/A URS0002681376 N/A synthetic
    construct
    32630    		 36599980 Assembly1
    rna:B:4~44 -2~20
    11399 8d8n:C
    (3.6Å)
    		 35 N/A URS0002616B66 N/A Candidatus
    Scalindua
    brodae
    237368    		 36007061 Assembly1
    rna:D:19~39 29~32,38,42,45~47
    11400 8d8n:D
    (3.6Å)
    		 21 N/A URS0002616B7C N/A Candidatus
    Scalindua
    brodae
    237368    		 36007061 Assembly1
    rna:C:13~47 19~22,24,28,35~37
    << < 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 > >>
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    Reference:
  • Chengxin Zhang, Lydia Freddolino (2024) "FURNA: a database for function annotations of RNA structures," PLOS Biology 22(7): e3002476.