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FURNA
Download all results in tab-seperated text for 14210 RNAs.
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  • Hover over Ligand to view the name of the ligand and the ligand-binding nucleotides on the RNA.
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    # PDB
    (Resolution)
    Length EC number
    & GO term
    RNAcentral Rfam Taxon PubMed ATtRACT
    motif
    Ligand &
    binding nucleotides
    11701 8flb:L4
    (2.55Å)

    120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00000F9D45 RF00001 Homo
    sapiens

    9606
    37410842
    931

    1290

    s51

    879
    Assembly1
    rna:L3:1~5069 77~80,84,88,98,100~102
    11702 8flc:L1
    (2.76Å)

    154 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS0000005270 RF00002 Homo
    sapiens

    9606
    37410842
    1227

    592

    M106_0.6

    993

    1215

    1271

    s37

    1238

    1178

    M085_0.6

    1389

    1360

    1352

    589
    Assembly1
    rna:L3:1~5069 3~22,24~37,40,53~54,103,108,11
    1~113,116~117,127~128,138~149,
    151~155
    11703 8flc:L3
    (2.76Å)

    3373 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS000075EC78 RF02543 Homo
    sapiens

    9606
    37410842
    M054_0.6

    1306

    769

    1302

    1303

    872

    1148

    167

    21

    1079

    930

    1029

    1075

    1071

    819

    1373

    938

    546

    s52

    s50

    931

    M272_0.6

    M347_0.6

    s59

    995

    994

    1314

    991

    1312

    1311

    1028

    1150

    123

    124

    125

    s100

    s102

    52

    533

    M227_0.6

    1384

    1385

    375

    926

    988

    1321

    708

    705

    706

    707

    1124

    987

    1126

    703

    M077_0.6

    1237

    83

    1181

    797

    795

    836

    837

    791

    838

    1334

    s70

    1016

    s72

    1393

    1012

    1013

    1236

    M290_0.6

    763

    1231

    1232

    1233

    1335

    1238

    M109_0.6

    1336

    1331

    1239

    1333

    589

    776

    M273_0.6

    s99

    1389

    902

    900

    901

    906

    905

    33

    s48

    s17

    970

    M044_0.6

    1245

    s62

    s61

    1227

    M035_0.6

    1223

    M156_0.6

    M320_0.6

    1347

    60

    s81

    M349_0.6

    1083

    974

    852

    853

    M154_0.6

    s55

    979

    M153_0.6

    183

    185

    1375

    815

    1036

    1328

    1034

    1212

    M102_0.6

    1216

    1215

    986

    467

    M148_0.6

    1354

    M103_0.6

    169

    91

    1127

    M070_0.6

    1026

    M020_0.6

    M050_0.6

    1187

    1182

    1183

    503

    1107

    M086_0.6

    1164

    1165

    1166

    886

    156

    748

    749

    M061_0.6

    958

    878

    879

    953

    952

    42

    954

    957

    1352

    774

    M104_0.6

    1173

    s77

    773

    1271

    1272

    1273

    779

    778

    1178

    78

    1285

    M083_0.6

    1041

    1040

    1043

    1045

    1044

    1288

    354

    688

    1360

    684

    800
    Assembly1
    rna:L1:1~156 2~22,58,339,342~348,350~353,35
    6~357,360,362,379~380,415~430,
    1305,1333~1334,1371,2308~2309,
    2313,2333~2334,2355,2444,2472,
    2477,2508~2509,2542~2544,2778

    rna:L4:1~120 1736~1738,1792,1794~1795,1894,
    1909,1936,1941~1942
    11704 8flc:L4
    (2.76Å)

    120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00000F9D45 RF00001 Homo
    sapiens

    9606
    37410842
    931

    1290

    s51

    879
    Assembly1
    rna:L3:1~5069 77~80,84,88,98,100~102
    11705 8fld:L1
    (2.58Å)

    154 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS0000005270 RF00002 Homo
    sapiens

    9606
    37410842
    1227

    592

    M106_0.6

    993

    1215

    1271

    s37

    1238

    1178

    M085_0.6

    1389

    1360

    1352

    589
    Assembly1
    rna:L3:1~5069 3~22,24~37,40~41,53,103,108,11
    1~113,116,127~128,136,138~149,
    151~155
    11706 8fld:L2
    (2.58Å)

    72 N/A URS0002681439 N/A Homo
    sapiens

    9606
    37410842
    1165

    M054_0.6

    900

    974

    836

    M050_0.6

    878

    879

    s17

    952

    986

    1236

    1028

    819

    1053

    s52

    91

    931

    930

    s62
    Assembly1
    rna:L3:1~5069 1166~1167
    11707 8fld:L3
    (2.58Å)

    3372 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS000075EC78 RF02543 Homo
    sapiens

    9606
    37410842
    M054_0.6

    1306

    769

    1303

    872

    1148

    167

    21

    1079

    930

    1029

    1075

    1071

    819

    1373

    938

    546

    s52

    s50

    931

    M272_0.6

    M347_0.6

    s59

    995

    994

    1314

    991

    1312

    1311

    1028

    1150

    123

    124

    125

    s100

    s102

    52

    533

    M227_0.6

    1384

    1385

    375

    926

    988

    1321

    708

    705

    706

    707

    1124

    987

    1126

    703

    M077_0.6

    1237

    83

    1181

    797

    795

    836

    837

    791

    838

    1334

    s70

    1016

    s72

    1393

    1012

    1013

    1236

    M290_0.6

    763

    1231

    1232

    1233

    1335

    1238

    M109_0.6

    1336

    1331

    1239

    1333

    589

    776

    M273_0.6

    s99

    1389

    902

    900

    901

    906

    905

    33

    s48

    s17

    970

    M044_0.6

    1245

    s62

    s61

    1227

    M035_0.6

    1223

    M156_0.6

    M320_0.6

    1347

    60

    s81

    M349_0.6

    1083

    974

    852

    853

    M154_0.6

    s55

    979

    M153_0.6

    183

    185

    1375

    815

    1036

    1328

    1034

    1212

    M102_0.6

    1216

    1215

    986

    467

    M148_0.6

    1354

    M103_0.6

    169

    91

    1127

    M070_0.6

    1026

    M020_0.6

    M050_0.6

    1187

    1182

    1183

    503

    1107

    M086_0.6

    1164

    1165

    1166

    886

    156

    748

    749

    M061_0.6

    958

    878

    879

    953

    952

    42

    954

    957

    1352

    774

    M104_0.6

    1173

    s77

    773

    1271

    1272

    1273

    779

    778

    1178

    78

    1285

    M083_0.6

    1041

    1040

    1043

    1045

    1044

    1288

    354

    688

    1360

    684

    800

    804
    Assembly1
    rna:L1:1~156 2~22,58,339,342~348,350~353,35
    6~357,360,362,379~380,415~430,
    1304~1305,1333~1334,1371,2308~
    2309,2333~2334,2355,2444,2472,
    2477,2508~2509,2542~2544,2778,
    4162

    rna:L2:2~1167 1~3,2491
    rna:L4:1~120 1736~1738,1792,1794~1795,1894,
    1909,1936,1941~1942
    11708 8fld:L4
    (2.58Å)

    120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00000F9D45 RF00001 Homo
    sapiens

    9606
    37410842
    931

    1290

    s51

    879
    Assembly1
    rna:L3:1~5069 77~79,84,88,98,100~101
    11709 8fle:L1
    (2.48Å)

    154 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS0000005270 RF00002 Homo
    sapiens

    9606
    37410842
    1227

    592

    M106_0.6

    993

    1215

    1271

    s37

    1238

    1178

    M085_0.6

    1389

    1360

    1352

    589
    Assembly1
    rna:L3:1~5069 3~22,24~37,40,53~54,103,108,11
    1~113,116,127~128,138~149,151~
    155
    11710 8fle:L3
    (2.48Å)

    3372 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS000075EC78 RF02543 Homo
    sapiens

    9606
    37410842
    M054_0.6

    1306

    769

    1303

    872

    1148

    167

    21

    1079

    930

    1029

    1075

    1071

    819

    1373

    938

    546

    s52

    s50

    931

    M272_0.6

    M347_0.6

    s59

    995

    994

    1314

    991

    1312

    1311

    1028

    1150

    123

    124

    125

    s100

    s102

    52

    533

    M227_0.6

    1384

    1385

    375

    926

    988

    1321

    708

    705

    706

    707

    1124

    987

    1126

    703

    M077_0.6

    1237

    83

    1181

    797

    795

    836

    837

    791

    838

    1334

    s70

    1016

    s72

    1393

    1012

    1013

    1236

    M290_0.6

    763

    1231

    1232

    1233

    1335

    1238

    M109_0.6

    1336

    1331

    1239

    1333

    589

    776

    M273_0.6

    s99

    1389

    902

    900

    901

    906

    905

    33

    s48

    s17

    970

    M044_0.6

    1245

    s62

    s61

    1227

    M035_0.6

    1223

    M156_0.6

    M320_0.6

    1347

    60

    s81

    M349_0.6

    1083

    974

    852

    853

    M154_0.6

    s55

    979

    M153_0.6

    183

    185

    1375

    815

    1036

    1328

    1034

    1212

    M102_0.6

    1216

    1215

    986

    467

    M148_0.6

    1354

    M103_0.6

    169

    91

    1127

    M070_0.6

    1026

    M020_0.6

    M050_0.6

    1187

    1182

    1183

    503

    1107

    M086_0.6

    1164

    1165

    1166

    886

    156

    748

    749

    M061_0.6

    958

    878

    879

    953

    952

    42

    954

    957

    1352

    774

    M104_0.6

    1173

    s77

    773

    1271

    1272

    1273

    779

    778

    1178

    78

    1285

    M083_0.6

    1041

    1040

    1043

    1045

    1044

    1288

    354

    688

    1360

    684

    800

    804
    Assembly1
    rna:L1:1~156 2~22,58,339,342~348,350~353,35
    6~357,360,362,379~380,415~430,
    1304~1305,1333~1334,1371,2308~
    2309,2312,2333~2334,2355,2444,
    2477,2508~2509,2542~2544,2778,
    4162

    rna:L4:1~120 1736~1738,1792,1794~1796,1894,
    1909,1936,1941~1942
    11711 8fle:L4
    (2.48Å)

    120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00000F9D45 RF00001 Homo
    sapiens

    9606
    37410842
    931

    1290

    s51

    879
    Assembly1
    rna:L3:1~5069 77~80,84,88,98,100~101
    11712 8flf:L1
    (2.65Å)

    154 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS0000005270 RF00002 Homo
    sapiens

    9606
    37410842
    1227

    592

    M106_0.6

    993

    1215

    1271

    s37

    1238

    1178

    M085_0.6

    1389

    1360

    1352

    589
    Assembly1
    rna:L3:1~5069 3~22,24~33,35~37,40,53~54,68,1
    03,108,111~113,116,127~128,135
    ~136,138~149,151~155
    11713 8flf:L3
    (2.65Å)

    3325 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS000075EC78 RF02543 Homo
    sapiens

    9606
    37410842
    M054_0.6

    1306

    769

    1303

    872

    1148

    167

    21

    1079

    930

    1029

    1075

    1071

    819

    1373

    938

    546

    s52

    s50

    931

    M272_0.6

    M347_0.6

    s59

    995

    994

    1314

    991

    1312

    1311

    1028

    1150

    123

    124

    125

    s100

    s102

    52

    533

    M227_0.6

    1384

    1385

    375

    926

    988

    1321

    708

    705

    706

    707

    1124

    987

    1126

    703

    M077_0.6

    1237

    83

    1181

    797

    795

    836

    837

    791

    838

    1334

    s70

    1016

    s72

    1393

    1012

    1013

    1236

    M290_0.6

    763

    1231

    1232

    1233

    1335

    1238

    M109_0.6

    1336

    1331

    1239

    1333

    589

    776

    M273_0.6

    s99

    1389

    902

    900

    901

    906

    905

    33

    s48

    s17

    970

    M044_0.6

    1245

    s62

    s61

    1227

    M035_0.6

    1223

    M156_0.6

    M320_0.6

    1347

    60

    s81

    M349_0.6

    1083

    974

    852

    853

    M154_0.6

    s55

    979

    M153_0.6

    183

    185

    1375

    815

    1036

    1328

    1034

    1212

    M102_0.6

    1216

    1215

    986

    467

    M148_0.6

    1354

    M103_0.6

    169

    91

    1127

    M070_0.6

    1026

    M020_0.6

    M050_0.6

    1187

    1182

    1183

    503

    1107

    M086_0.6

    1164

    1165

    1166

    886

    156

    748

    749

    M061_0.6

    958

    878

    879

    953

    952

    42

    954

    957

    1352

    774

    M104_0.6

    1173

    s77

    773

    1271

    1272

    1273

    779

    778

    1178

    78

    1285

    M083_0.6

    1041

    1040

    1043

    1045

    1044

    1288

    354

    688

    1360

    684

    800
    Assembly1
    rna:L1:1~156 2~22,58,193,339,342~348,350~35
    3,356~357,360,362,379~380,415~
    430,1304~1305,1333~1334,1371,2
    308~2309,2312~2313,2333~2334,2
    355,2444,2472,2477,2508~2509,2
    542~2544,2778,4162

    rna:L4:1~120 1736~1738,1792,1794~1796,1894,
    1909,1936,1941~1942
    11714 8flf:L4
    (2.65Å)

    120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00000F9D45 RF00001 Homo
    sapiens

    9606
    37410842
    931

    1290

    s51

    879
    Assembly1
    rna:L3:1~5069 77~80,84,88,98,100~101
    11715 8fmw:A
    (2.86Å)

    1529 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS000291569B RF00177
    RF01959
    RF02542
    RF01960
    Borreliella
    burgdorferi
    B31

    224326
    37907464 Assembly1
    rna:AA:4~2932 700,782,891~892,1402~1403,1412
    ~1413,1423~1424,1470~1471,1479
    ~1480,1489~1492,1513
    11716 8fmw:AA
    (2.86Å)

    2929 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00029156D1 RF02541 Borreliella
    burgdorferi
    B31

    224326
    37907464 Assembly1
    rna:A:1~1529 1772,1784,1786~1787,1886,1891,
    1902,1966~1967,1969~1970,1973~
    1974,1976,2001~2003,2013~2014

    rna:X:1~76 1905~1906,2166,2223,2235,2440~
    2441,2467~2468,2478

    rna:AB:1~112 942~945,997~998,1066,1079~1080
    11717 8fmw:AB
    (2.86Å)

    112 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00002DD409 RF00001 Borreliella
    burgdorferi
    B31

    224326
    37907464 Assembly1
    rna:AA:4~2932 77~79,83,91,93~94
    11718 8fmw:X
    (2.86Å)

    76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS0002915681 RF00005 Borreliella
    burgdorferi
    B31

    224326
    37907464 Assembly1
    rna:AA:4~2932 17,19,56,71~72,76
    11719 8fn2:A
    (3.4Å)

    2762 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00029156D1 RF02541 Borreliella
    burgdorferi
    B31

    224326
    37907464 Assembly1
    rna:B:1~112 942~945,997~998,1066,1080
    11720 8fn2:B
    (3.4Å)

    112 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00002DD409 RF00001 Borreliella
    burgdorferi
    B31

    224326
    37907464 Assembly1
    rna:A:4~2932 77~79,83,91,93~94
    11721 8fnf:g
    (3.5Å)

    16 N/A URS000268142F N/A Trypanosoma
    brucei

    5691
    37410820 Assembly1
    rna:m:105~124 -15~-14
    11722 8fnk:g
    (3.7Å)

    43 N/A URS000268144B N/A Trypanosoma
    brucei

    5691
    37410820 Assembly1
    rna:m:101~151 -43~-20
    11723 8fnk:m
    (3.7Å)

    51 N/A N/A N/A Trypanosoma
    brucei

    5691
    37410820 Assembly1
    rna:g:-43~-1 128~151
    11724 8fom:QA
    (3.58Å)

    1500 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS000080E226 RF00177
    RF01959
    RF02542
    RF01960
    Thermus
    thermophilus
    HB8

    300852
    36924943 Assembly1
    rna:QV:1~76 790,966,1229,1338~1340,1400
    rna:QX:1~3 926,1400~1402,1498
    rna:RA:6~2897 702,783~784,899,1407~1409,1418
    ,1429,1443,1474~1475,1483~1484
    ,1493~1496,1517
    11725 8fom:QV
    (3.58Å)

    74 GO:0030533 (F) triplet codon-amino aci... URS00026813D3 RF00005 Escherichia
    coli

    562
    36924943 Assembly1
    rna:QA:5~1531 30~32,34,38~42
    rna:QX:1~3 34~37
    rna:RA:6~2897 11~13,24,74~76
    11726 8fom:RA
    (3.58Å)

    2882 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00001698E8 RF02541 Thermus
    thermophilus
    HB8

    300852
    36924943 Assembly1
    rna:QA:5~1531 1689,1700~1701,1703~1704,1832,
    1836~1837,1846,1848,1912~1916,
    1919~1920,1947~1948,1959~1961,
    2863~2864

    rna:QV:1~76 1907~1909,1923~1924,2064,2251~
    2252,2439,2451,2601~2602

    rna:RB:1~119 861~864,917~919,958
    rna:Z6:74~76 2451~2452,2504,2506~2507,2553~
    2555,2583~2585,2602
    11727 8fom:RB
    (3.58Å)

    120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00005F2F4B RF00001 Thermus
    thermophilus
    HB8

    300852
    36924943 Assembly1
    rna:RA:6~2897 78~81,89A,96~100
    11728 8fom:XA
    (3.58Å)

    1511 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS000080E226 RF01959
    RF00177
    RF02542
    RF01960
    Thermus
    thermophilus
    HB8

    300852
    36924943 Assembly2
    rna:XV:1~76 790,966,1229,1338~1340,1400
    rna:XX:-14~8 693,723,788,926,1397,1400~1401
    ,1403,1492~1493,1498,1503,1505
    ,1507,1531~1542

    rna:XY:27~43 530~531,1054,1493
    rna:YA:6~2897 702,783~784,899,1407~1409,1418
    ,1429,1443,1473~1475,1483~1484
    ,1493~1496,1517
    11729 8fom:XV
    (3.58Å)

    74 GO:0030533 (F) triplet codon-amino aci... URS00026813D3 RF00005 Escherichia
    coli

    562
    36924943 Assembly2
    rna:XA:5~1542 30~32,34,38~41
    rna:XX:-14~8 34~37
    rna:YA:6~2897 11~13,24~25,74~76
    11730 8fom:XX
    (3.58Å)

    23 N/A N/A N/A Escherichia
    coli

    562
    36924943 Assembly2
    rna:XA:5~1542 -14~5,7~8
    rna:XV:1~76 1~3
    rna:XY:27~43 4~6
    11731 8fom:XY
    (3.58Å)

    17 GO:0030533 (F) triplet codon-amino aci... URS000080DF54 RF00005 Escherichia
    coli

    562
    36924943 Assembly2
    rna:XA:5~1542 34~37
    rna:XX:-14~8 34,36~37
    11732 8fom:YA
    (3.58Å)

    2883 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00001698E8 RF02541 Thermus
    thermophilus
    HB8

    300852
    36924943 Assembly2
    rna:XA:5~1542 1689,1700~1704,1832,1836~1837,
    1846,1848,1912~1913,1915~1916,
    1919~1920,1947~1949,1959~1961,
    2864

    rna:XV:1~76 1908~1909,1922~1924,2064,2251~
    2252,2451,2601~2602

    rna:YB:1~119 861~864,915~919,958
    rna:Z8:74~76 2451~2452,2504,2506~2507,2553~
    2555,2583~2585,2602
    11733 8fom:YB
    (3.58Å)

    120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00005F2F4B RF00001 Thermus
    thermophilus
    HB8

    300852
    36924943 Assembly2
    rna:YA:6~2897 78~81,89A,96~97,99~101
    11734 8fon:QA
    (3.64Å)

    1500 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS000080E226 RF00177
    RF01959
    RF02542
    RF01960
    Thermus
    thermophilus
    HB8

    300852
    36924943 Assembly1
    rna:QV:1~76 790,966,1229,1338~1340,1400
    rna:QX:1~3 926,1400,1498,1505
    rna:RA:6~2897 702,783~784,899,1407~1409,1418
    ,1429,1443,1473~1475,1483~1484
    ,1492~1496,1517
    11735 8fon:QV
    (3.64Å)

    74 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS000077A941 RF00005 Escherichia
    coli

    562
    36924943 Assembly1
    rna:QA:5~1531 30~31,34,38~41
    rna:QX:1~3 34~37
    rna:RA:6~2897 3,11~12,24~25,74~76
    11736 8fon:RA
    (3.64Å)

    2881 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00001698E8 RF02541 Thermus
    thermophilus
    HB8

    300852
    36924943 Assembly1
    rna:QA:5~1531 1689,1700~1704,1832,1836~1837,
    1846,1848,1895,1912~1916,1919~
    1920,1947~1948,1959~1961,2863~
    2864

    rna:QV:1~76 1908~1909,1922~1923,2063~2064,
    2251~2252,2255,2439,2451,2601~
    2602

    rna:RB:1~119 861~863,915~919,958
    rna:Z6:74~76 2451~2452,2504,2506~2507,2553~
    2555,2583~2585,2602
    11737 8fon:RB
    (3.64Å)

    120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00005F2F4B RF00001 Thermus
    thermophilus
    HB8

    300852
    36924943 Assembly1
    rna:RA:6~2897 78~81,89A,97,99~100
    11738 8fon:XA
    (3.64Å)

    1511 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS000080E226 RF01959
    RF00177
    RF02542
    RF01960
    Thermus
    thermophilus
    HB8

    300852
    36924943 Assembly2
    rna:XV:1~76 790,966,1229~1230,1338~1340,14
    00

    rna:XX:-14~8 693,789,926,1397,1400,1492~149
    4,1498,1503,1505,1531~1539,154
    1

    rna:XY:27~43 530~531,1054,1493
    rna:YA:6~2897 702,783~784,899,1407~1409,1418
    ,1429,1443,1473~1475,1483~1484
    ,1493~1496,1517
    11739 8fon:XV
    (3.64Å)

    74 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS000077A941 RF00005 Escherichia
    coli

    562
    36924943 Assembly2
    rna:XA:5~1542 30~32,34,38~41
    rna:XX:-14~8 34~37
    rna:YA:6~2897 3,11~12,24~25,74~76
    11740 8fon:XX
    (3.64Å)

    23 N/A N/A N/A Escherichia
    coli

    562
    36924943 Assembly2
    rna:XA:5~1542 -14~-13,-11~5,7~8
    rna:XV:1~76 0~3
    rna:XY:27~43 5~7
    11741 8fon:XY
    (3.64Å)

    17 GO:0030533 (F) triplet codon-amino aci... URS000080DF54 RF00005 Escherichia
    coli

    562
    36924943 Assembly2
    rna:XA:5~1542 34~37
    rna:XX:-14~8 34~36
    11742 8fon:YA
    (3.64Å)

    2883 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00001698E8 RF02541 Thermus
    thermophilus
    HB8

    300852
    36924943 Assembly2
    rna:XA:5~1542 1689,1700~1704,1836,1846,1848,
    1912~1913,1915~1916,1919~1920,
    1947~1948,1959~1961,2863~2864

    rna:XV:1~76 1908~1909,1922~1923,2063~2064,
    2251~2252,2255,2439,2450~2451,
    2601~2603

    rna:YB:1~119 861~864,915,917~919,958
    rna:Z8:74~76 2451~2452,2506~2507,2553~2555,
    2583~2585,2602
    11743 8fon:YB
    (3.64Å)

    120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00005F2F4B RF00001 Thermus
    thermophilus
    HB8

    300852
    36924943 Assembly2
    rna:YA:6~2897 78~81,89A,97,99~101
    11744 8fr8:A
    (2.76Å)

    3119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS0000D7793F RF02541 Mycolicibacterium
    smegmatis
    MC2
    155

    246196
    37216503 Assembly1
    rna:E:501~576 2131~2133,2146~2147,2476~2477,
    2479,2663,2809,2825~2826

    rna:B:1~118 976~978,1030~1034,1068
    rna:a:7~1517 1918~1921,2053~2054,2063,2065,
    2119,2136~2137,2139~2140,2143~
    2144,2171~2174,2183~2185
    11745 8fr8:B
    (2.76Å)

    118 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00000ACC0A RF00001 Mycolicibacterium
    smegmatis
    MC2
    155

    246196
    37216503 Assembly1
    rna:A:2~3120 79~82,90,96,98~99
    11746 8fr8:E
    (2.76Å)

    77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS000043C91B RF00005 Mycolicibacterium
    smegmatis
    MC2
    155

    246196
    37216503 Assembly1
    rna:A:2~3120 501~502,504,511~513,524~525,57
    4~576

    rna:a:7~1517 530~531,534,537,539~540
    rna:v:5~22 534~536
    11747 8fr8:a
    (2.76Å)

    1511 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS0000D7794D RF00177
    RF01959
    RF02542
    RF01960
    Mycolicibacterium
    smegmatis
    MC2
    155

    246196
    37216503 Assembly1
    rna:E:501~576 770,948,1210~1211,1320~1322,13
    83

    rna:A:2~3120 682,764,881,1390~1392,1401~140
    3,1412,1457~1459,1467~1468,147
    6~1480,1501

    rna:v:5~22 510,673,908,1380,1383~1384,138
    6,1482,1489~1490
    11748 8fr8:v
    (2.76Å)

    18 N/A N/A N/A Mycolicibacterium
    smegmatis
    MC2
    155

    246196
    37216503 Assembly1
    rna:E:501~576 16~18
    rna:a:7~1517 12~18,21~22
    11749 8fru:1
    (2.49Å)

    2551 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS0002915677 RF02543 Giardia
    intestinalis
    assemblage
    A

    941442
    38242118 Assembly1
    rna:3:1~117 709~711,763,765~766,879,900~90
    1

    rna:4:1~141 1~21,57,121,278,281~286,288~29
    1,294~295,298,300~301,318~319,
    352~356,358~365,403,1081~1082,
    1105,1127,1212,1255,1463~1465,
    1871~1872
    11750 8fru:3
    (2.49Å)

    117 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS000007DE0E RF00001 Giardia
    intestinalis
    assemblage
    A

    941442
    38242118 Assembly1
    rna:1:1~2687 77~79,84,88,97~98,101
    11751 8fru:4
    (2.49Å)

    141 N/A URS000291567D N/A Giardia
    intestinalis
    assemblage
    A

    941442
    38242118 Assembly1
    rna:1:1~2687 1~2,6~13,15~22,24~31,33,35~37,
    40,52~53,103,111~112,122~133,1
    35~140
    11752 8fto:A
    (1.85Å)

    1519 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00000ABFE9 RF00177
    RF01959
    RF02542
    RF01960
    Escherichia
    coli

    562
    37419664 Assembly1
    rna:X:14~22 926,1397,1400~1402,1493,1498
    rna:Z:2~77 790,966,1229,1338~1340,1400
    rna:a:1~2936 702,784,899,1407~1409,1418,142
    8~1429,1473~1475,1483~1484,149
    2,1494~1496,1517
    11753 8fto:Z
    (1.85Å)

    76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS00002905B5 RF00005 Escherichia
    coli

    562
    37419664 Assembly1
    rna:A:2~1534 31~33,35,39~42
    rna:X:14~22 35~38
    rna:a:1~2936 2~3,11~13,25~26,75~77
    11754 8fto:a
    (1.85Å)

    2767 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS0002681457 RF02541 Escherichia
    coli

    562
    37419664 Assembly1
    rna:A:2~1534 1689,1700~1704,1832,1836~1837,
    1846,1848,1912~1916,1919~1920,
    1947~1948,1959~1961

    rna:Z:2~77 1907~1909,1922~1924,2063~2064,
    2251~2253,2255,2450~2451

    rna:b:1~119 861~864,915,917~919,958,2339
    11755 8fto:b
    (1.85Å)

    119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS0000049E57 RF00001 Escherichia
    coli

    562
    37419664 Assembly1
    rna:a:1~2936 41,78~81,89~90,96~97,99~100
    11756 8fvi:B
    (3.24Å)

    10 N/A URS000268147F N/A Escherichia
    coli

    562
    37640699 Assembly1
    rna:C:1~9 4~11
    11757 8fvy:g
    (2.94Å)

    74 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS00029156E7 RF00005 Giardia
    intestinalis
    assemblage
    A

    941442
    38242118 Assembly1
    rna:2:1~1451 33~34
    11758 8fzd:A
    (3.1Å)

    2899 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF02541 Escherichia
    coli

    562
    39030416 Assembly1
    rna:a:2~1534 1700,1703,1832,1837,1846,1848,
    1912~1913,1915~1916,1919~1920,
    1947~1948,1959~1961

    rna:x:1~76 1907~1908,1922~1924,2064,2251~
    2253,2450~2451,2602

    rna:y:1~76 1851~1852,2112,2168,2394~2395,
    2421~2422,2432

    rna:B:1~120 861~864,915,917~918,958,2340
    11759 8fzd:B
    (3.1Å)

    120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00005C6868 RF00001 Escherichia
    coli

    562
    39030416 Assembly1
    rna:A:1~2903 41,78~80,89,96~97,99~100
    11760 8fzd:a
    (3.1Å)

    1528 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00000ABFE9 RF00177
    RF01959
    RF02542
    RF01960
    Escherichia
    coli

    562
    39030416 Assembly1
    rna:x:1~76 790,966,1229,1338~1340,1400
    rna:z:11~20 530,1196,1397,1400~1402,1492~1
    493,1498

    rna:A:1~2903 702,784,899,1407~1409,1418,142
    9,1483~1484,1493~1495,1517
    11761 8fzd:x
    (3.1Å)

    76 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Escherichia
    coli

    562
    39030416 Assembly1
    rna:a:2~1534 30~32,34,38,40~41
    rna:z:11~20 34~37
    rna:A:1~2903 12~13,24~25,74~76
    11762 8fzd:y
    (3.1Å)

    74 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Escherichia
    coli

    562
    39030416 Assembly1
    rna:A:1~2903 19,56,71,75~76
    11763 8fzd:z
    (3.1Å)

    10 N/A N/A N/A Escherichia
    phage
    T4

    2681598
    39030416 Assembly1
    rna:a:2~1534 14~20
    rna:x:1~76 14~16
    11764 8fze:A
    (3.0Å)

    2899 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF02541 Escherichia
    coli

    562
    39030416 Assembly1
    rna:a:2~1534 1700,1703,1832,1837,1846,1848,
    1912~1913,1915~1916,1919~1920,
    1947~1948,1959~1961

    rna:x:1~76 1907~1908,1923,2251~2252,2450~
    2451,2602

    rna:y:1~76 1851~1852,2112,2168,2394~2395,
    2421~2422

    rna:B:1~120 861~863,915,917~918,958,2340
    11765 8fze:B
    (3.0Å)

    120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00005C6868 RF00001 Escherichia
    coli

    562
    39030416 Assembly1
    rna:A:1~2903 41,78~80,89,96~97,99~100
    11766 8fze:a
    (3.0Å)

    1528 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00000ABFE9 RF00177
    RF01959
    RF02542
    RF01960
    Escherichia
    coli

    562
    39030416 Assembly1
    rna:x:1~76 790,966,1229~1230,1338~1340,14
    00

    rna:z:11~20 530,926,1054,1400~1402,1492~14
    93,1498

    rna:A:1~2903 702,784,899,1407~1409,1418,142
    9,1474,1483~1484,1493~1495,151
    7
    11767 8fze:x
    (3.0Å)

    76 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Escherichia
    coli

    562
    39030416 Assembly1
    rna:a:2~1534 30~31,34,38,40~41
    rna:z:11~20 34~37
    rna:A:1~2903 12~13,24,74~76
    11768 8fze:y
    (3.0Å)

    74 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Escherichia
    coli

    562
    39030416 Assembly1
    rna:A:1~2903 19,56,71,76
    11769 8fze:z
    (3.0Å)

    10 N/A N/A N/A Escherichia
    phage
    T4

    2681598
    39030416 Assembly1
    rna:a:2~1534 14~20
    rna:x:1~76 14~16
    11770 8fzf:A
    (3.2Å)

    2899 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF02541 Escherichia
    coli

    562
    39030416 Assembly1
    rna:a:2~1534 1703,1912~1914,1919~1920,1947~
    1948,1959~1961

    rna:x:1~76 1851,1892~1893,2112,2394~2395,
    2421~2422,2432

    rna:B:1~120 861~864,915,917~918,958
    11771 8fzf:B
    (3.2Å)

    120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00005C6868 RF00001 Escherichia
    coli

    562
    39030416 Assembly1
    rna:A:1~2903 78~80,89,96~97,99~100
    11772 8fzf:a
    (3.2Å)

    1528 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00000ABFE9 RF00177
    RF01959
    RF02542
    RF01960
    Escherichia
    coli

    562
    39030416 Assembly1
    rna:x:1~76 790,966,1229,1338~1340,1400
    rna:z:12~19 530,926,1400~1402,1493,1498
    rna:A:1~2903 702,1407~1409,1418,1428,1475,1
    483~1484,1493~1495,1517
    11773 8fzf:x
    (3.2Å)

    74 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Escherichia
    coli

    562
    39030416 Assembly1
    rna:a:2~1534 29~31,34,37~38,41~42
    rna:z:12~19 34~37
    rna:A:1~2903 3,19,70~71,75~76
    11774 8fzg:A
    (3.1Å)

    2899 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF02541 Escherichia
    coli

    562
    39030416 Assembly1
    rna:a:2~1534 1703~1704,1832,1837,1846,1848,
    1912~1913,1915~1916,1919~1920,
    1947~1949,1959~1961

    rna:x:1~76 1907~1908,1922~1923,2251~2253,
    2255,2450~2451,2602

    rna:y:1~76 1851,2112,2168,2394,2421~2422,
    2432

    rna:B:1~120 861~864,915,917~918,958
    11775 8fzg:B
    (3.1Å)

    120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00005C6868 RF00001 Escherichia
    coli

    562
    39030416 Assembly1
    rna:A:1~2903 78~80,89,96~97,99~100
    11776 8fzg:a
    (3.1Å)

    1528 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00000ABFE9 RF00177
    RF01959
    RF02542
    RF01960
    Escherichia
    coli

    562
    39030416 Assembly1
    rna:x:1~76 790,966,1229,1338~1340,1400
    rna:z:11~21 530,693,1196,1397,1400~1402,14
    92~1493,1498

    rna:A:1~2903 702,784,899,1407~1409,1418~141
    9,1429,1474,1483~1484,1493~149
    6,1517
    11777 8fzg:x
    (3.1Å)

    76 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Escherichia
    coli

    562
    39030416 Assembly1
    rna:a:2~1534 30~32,34,38,40~41
    rna:z:11~21 34~37
    rna:A:1~2903 12~13,24~25,74~76
    11778 8fzg:y
    (3.1Å)

    74 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Escherichia
    coli

    562
    39030416 Assembly1
    rna:A:1~2903 19,56,71,75~76
    11779 8fzg:z
    (3.1Å)

    11 N/A N/A N/A Escherichia
    phage
    T4

    2681598
    39030416 Assembly1
    rna:a:2~1534 11,14~20
    rna:x:1~76 14~16
    rna:y:1~76 11~12
    11780 8fzh:A
    (2.9Å)

    2899 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF02541 Escherichia
    coli

    562
    39030416 Assembly1
    rna:a:2~1534 1701,1703,1832,1837,1848,1912~
    1913,1915~1916,1919~1920,1947~
    1949,1959~1961

    rna:x:1~76 1907~1909,1922~1924,2064,2251~
    2253,2255,2450~2451

    rna:y:1~76 1851~1852,2112,2394,2421~2422
    rna:B:1~120 861~863,915,917~918,958,2339
    11781 8fzh:B
    (2.9Å)

    120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00005C6868 RF00001 Escherichia
    coli

    562
    39030416 Assembly1
    rna:A:1~2903 41,78~80,89,97,99~100
    11782 8fzh:a
    (2.9Å)

    1528 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00000ABFE9 RF00177
    RF01959
    RF02542
    RF01960
    Escherichia
    coli

    562
    39030416 Assembly1
    rna:x:1~76 790,966,1229~1230,1338~1340,14
    00

    rna:z:11~21 530,693,926,1054,1196,1397,140
    0~1402,1492~1493,1498

    rna:A:1~2903 702,784,899,1407~1409,1418~141
    9,1429,1474,1483~1484,1493~149
    6,1517
    11783 8fzh:x
    (2.9Å)

    76 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Escherichia
    coli

    562
    39030416 Assembly1
    rna:a:2~1534 30~31,34,38,40~41
    rna:z:11~21 34~37
    rna:A:1~2903 12~13,24~25,74~76
    11784 8fzh:y
    (2.9Å)

    74 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Escherichia
    coli

    562
    39030416 Assembly1
    rna:A:1~2903 19,70~71,76
    11785 8fzh:z
    (2.9Å)

    11 N/A N/A N/A Escherichia
    phage
    T4

    2681598
    39030416 Assembly1
    rna:a:2~1534 11,13~21
    rna:x:1~76 14~16
    11786 8fzi:A
    (3.1Å)

    2899 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF02541 Escherichia
    coli

    562
    39030416 Assembly1
    rna:a:2~1534 1703,1912~1913,1915~1916,1919~
    1920,1947~1949,1959~1961

    rna:x:1~76 1850~1851,1891~1893,2112,2394~
    2395,2421~2422,2432

    rna:B:1~120 861~863,915,917~918,958
    11787 8fzi:B
    (3.1Å)

    120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00005C6868 RF00001 Escherichia
    coli

    562
    39030416 Assembly1
    rna:A:1~2903 78~80,89,97,99~100
    11788 8fzi:a
    (3.1Å)

    1528 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00000ABFE9 RF00177
    RF01959
    RF02542
    RF01960
    Escherichia
    coli

    562
    39030416 Assembly1
    rna:x:1~76 790,966,1229,1338~1340,1400
    rna:z:12~19 530,926,1400,1402,1498
    rna:A:1~2903 1407~1409,1418~1419,1428,1483~
    1484,1493~1495,1517
    11789 8fzi:x
    (3.1Å)

    74 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Escherichia
    coli

    562
    39030416 Assembly1
    rna:a:2~1534 30~31,34,38,40~42
    rna:z:12~19 34~37
    rna:A:1~2903 3,19,56,70~71,75~76
    11790 8fzj:A
    (3.0Å)

    2899 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF02541 Escherichia
    coli

    562
    39030416 Assembly1
    rna:a:2~1534 1703,1912~1913,1915~1916,1919~
    1920,1947~1949,1959~1961

    rna:x:1~76 1850~1851,1891~1893,2112,2394,
    2421~2422,2432

    rna:B:1~120 861~863,915,917~918,958
    11791 8fzj:B
    (3.0Å)

    120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00005C6868 RF00001 Escherichia
    coli

    562
    39030416 Assembly1
    rna:A:1~2903 78~80,89,97,99~100
    11792 8fzj:a
    (3.0Å)

    1528 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00000ABFE9 RF00177
    RF01959
    RF02542
    RF01960
    Escherichia
    coli

    562
    39030416 Assembly1
    rna:x:1~76 790,966,1229,1338~1340,1400
    rna:z:12~19 530,926,1400,1493,1498
    rna:A:1~2903 1407~1409,1418~1419,1428~1429,
    1483~1484,1493~1495,1517
    11793 8fzj:x
    (3.0Å)

    74 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Escherichia
    coli

    562
    39030416 Assembly1
    rna:a:2~1534 30~31,34,38,40~42
    rna:z:12~19 34~37
    rna:A:1~2903 3,19,70~71,75~76
    11794 8fzt:A
    (3.03Å)

    38 N/A URS000268140E N/A Streptococcus
    pyogenes

    1314
    N/A Assembly1
    rna:B:2~70 26~27,30~38
    11795 8fzt:B
    (3.03Å)

    69 N/A URS0002681416 RF02348 Streptococcus
    pyogenes

    1314
    N/A Assembly1
    rna:A:1~38 2~11,17~18
    11796 8g29:1A
    (2.55Å)

    2871 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00001698E8 RF02541 Thermus
    thermophilus
    HB8

    300852
    38238495 Assembly1
    rna:1B:1~120 861~863,915,917~919,958
    rna:1a:4~1533 1689,1700~1704,1832,1836~1837,
    1846,1848,1912~1916,1919~1920,
    1947~1949,1959~1961,2863~2864

    rna:1w:1~76 882,896~897,1913,1942,2451~245
    2,2482~2483,2506~2507,2553~255
    5,2583~2585,2602

    rna:1x:1~76 1907~1909,1922~1924,2063,2251~
    2253,2439,2450~2451,2585,2601~
    2602

    rna:1y:1~76 1851,1885,2112,2169,2394~2395,
    2421~2422,2432
    11797 8g29:1B
    (2.55Å)

    120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS000080DEE8 RF00001 Thermus
    thermophilus
    HB8

    300852
    38238495 Assembly1
    rna:1A:6~2897 78~81,90,97~98,100~101
    11798 8g29:1a
    (2.55Å)

    1500 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS000080DFED RF00177
    RF01959
    RF02542
    RF01960
    Thermus
    thermophilus
    HB8

    300852
    38238495 Assembly1
    rna:1A:6~2897 702,783~784,899~900,1407~1409,
    1418,1429,1442A,1473~1475,1483
    ~1484,1494~1496,1517

    rna:1v:12~24 530,926,1196,1397,1400~1401,14
    92~1493,1498,1503,1505,1507

    rna:1w:1~76 530,1054,1493
    rna:1x:1~76 790,966,1229~1230,1338~1341,14
    00
    11799 8g29:1v
    (2.55Å)

    13 N/A N/A N/A Tequatrovirus
    T4

    10665
    38238495 Assembly1
    rna:1a:4~1533 13,15~24
    rna:1w:1~76 19~22
    rna:1x:1~76 16~18
    11800 8g29:1w
    (2.55Å)

    74 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS00005AA258 RF00005 Escherichia
    coli

    562
    38238495 Assembly1
    rna:1A:6~2897 19,37~38,56,64,74~76
    rna:1a:4~1533 34~37
    rna:1v:12~24 34~37
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    Reference:
  • Chengxin Zhang, P. Lydia Freddolino (2023) FURNA: a database for function annotations of RNA structures, bioRxiv 2023.12.19.572314.
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