SEQ2FUN

FURNA
Download all results in tab-seperated text for 14210 RNAs.
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  • Hover over Ligand to view the name of the ligand and the ligand-binding nucleotides on the RNA.

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    # PDB
    (Resolution)    		 Length EC number
    & GO term     		RNAcentral Rfam Taxon PubMed ATtRACT
    motif     		Ligand &
    binding nucleotides
    12001 8h2h:A
    (3.2Å)
    		 692 GO:0000373 (P) Group II intron splicing URS00021ED979 RF00029 Lactococcus
    lactis
    1358    		 36344519 Assembly1
    rna:B:1~12 107,121,220~222,224,226~228,27
    6,280,282,284
    12002 8h2h:B
    (3.2Å)
    		 12 N/A URS0000A76362 N/A Lactococcus
    lactis
    1358    		 36344519 Assembly1
    rna:A:1~2492 1~4,7~9,11~12
    12003 8h69:3
    (3.7Å)
    		 18 N/A URS0002681438 N/A Influenza
    A
    virus
    (A/goose/Guangdong/1/1996(H5N1))
    93838    		 37488357 Assembly1
    rna:5:1~19 1~10,13
    12004 8h69:5
    (3.7Å)
    		 19 N/A URS000268144C N/A Influenza
    A
    virus
    (A/goose/Guangdong/1/1996(H5N1))
    93838    		 37488357 Assembly1
    rna:3:1~18 11~19
    12005 8h6e:2A
    (3.2Å)
    		 109 GO:0045131 (F) pre-mRNA branch point b...
    GO:0000348 (P) mRNA branch site recogn...
    GO:0005686 (C) U2 snRNP    		 URS00003EE995 RF00004 Homo
    sapiens
    9606    		 38658629
    1212

    1373

    504    		 Assembly1
    rna:A:7~119 31~46
    rna:6A:36~105 3~12,14
    12006 8h6e:4A
    (3.2Å)
    		 125 GO:0017070 (F) U6 snRNA binding
    GO:0000244 (P) spliceosomal tri-snRNP ...
    GO:0000353 (P) formation of quadruple ...
    GO:0005687 (C) U4 snRNP
    GO:0046540 (C) U4/U6 x U5 tri-snRNP co...    		 N/A RF00015 Homo
    sapiens
    9606    		 38658629
    750

    780

    583

    993    		 Assembly1
    rna:6A:36~105 1~12,14~17,56~63,66~68
    12007 8h6e:5A
    (3.2Å)
    		 114 GO:0000244 (P) spliceosomal tri-snRNP ...
    GO:0000353 (P) formation of quadruple ...
    GO:0005682 (C) U5 snRNP
    GO:0046540 (C) U4/U6 x U5 tri-snRNP co...    		 N/A RF00020 Homo
    sapiens
    9606    		 38658629
    1213

    M150_0.6

    1263

    42

    1267

    M158_0.6

    1355

    M025_0.6

    M075_0.6

    185

    s67

    1274

    1392

    1390    		 Assembly1
    rna:A:7~119 40~43
    12008 8h6e:6A
    (3.2Å)
    		 59 GO:0030621 (F) U4 snRNA binding
    GO:0000244 (P) spliceosomal tri-snRNP ...
    GO:0000353 (P) formation of quadruple ...
    GO:0005688 (C) U6 snRNP
    GO:0046540 (C) U4/U6 x U5 tri-snRNP co...    		 N/A RF00026 Homo
    sapiens
    9606    		 38658629
    1334

    s59

    M021_0.6    		 Assembly1
    rna:A:7~119 36,38~45
    rna:4A:1~145 47,49~56,59~75
    rna:2A:3~184 85~95
    12009 8h6e:A
    (3.2Å)
    		 59 N/A N/A N/A Homo
    sapiens
    9606    		 38658629
    605

    1129

    M156_0.6

    596

    995

    609

    1202

    M077_0.6

    M149_0.6

    726

    775

    s65

    1074

    798

    1039

    1018

    M012_0.6

    1015

    1094

    1096

    996

    1159

    1158

    772

    465

    1272

    611

    1098

    1135

    s95

    725

    332

    1069

    1286

    1061

    1184

    1065

    s101

    M232_0.6

    1106

    1243

    1242

    683

    720

    721

    765

    s67

    686

    1063

    1108    		 Assembly1
    rna:6A:36~105 110~118
    rna:5A:4~117 104,106~107
    rna:2A:3~184 16~17,19~20,22~28,30~32
    12010 8h6j:2A
    (3.25Å)
    		 109 GO:0045131 (F) pre-mRNA branch point b...
    GO:0000348 (P) mRNA branch site recogn...
    GO:0005686 (C) U2 snRNP    		 URS00003EE995 RF00004 Homo
    sapiens
    9606    		 38658629
    1212

    1373

    504    		 Assembly1
    rna:A:7~48 31~46
    rna:6A:31~105 3~12,14
    12011 8h6j:4A
    (3.25Å)
    		 125 GO:0017070 (F) U6 snRNA binding
    GO:0000244 (P) spliceosomal tri-snRNP ...
    GO:0000353 (P) formation of quadruple ...
    GO:0005687 (C) U4 snRNP
    GO:0046540 (C) U4/U6 x U5 tri-snRNP co...    		 N/A RF00015 Homo
    sapiens
    9606    		 38658629
    750

    780

    583

    993    		 Assembly1
    rna:6A:31~105 1~12,14~17,56~64,66~68,73~78
    12012 8h6j:6A
    (3.25Å)
    		 54 GO:0030621 (F) U4 snRNA binding
    GO:0000244 (P) spliceosomal tri-snRNP ...
    GO:0000353 (P) formation of quadruple ...
    GO:0005688 (C) U6 snRNP
    GO:0046540 (C) U4/U6 x U5 tri-snRNP co...    		 N/A RF00026 Homo
    sapiens
    9606    		 38658629
    1334

    s59

    M021_0.6    		 Assembly1
    rna:4A:1~144 32~36,47,49~56,59~75
    rna:2A:3~184 85~95
    12013 8h6j:A
    (3.25Å)
    		 42 N/A N/A N/A Homo
    sapiens
    9606    		 38658629
    605

    1129

    M156_0.6

    596

    609

    1202

    M077_0.6

    M149_0.6

    726

    775

    s65

    1074

    798

    1039

    1018

    M012_0.6

    1015

    1094

    1096

    996

    1159

    1158

    772

    465

    1272

    611

    1098

    1135

    s95

    725

    332

    1069

    1286

    1061

    1184

    1065

    s101

    M232_0.6

    1106

    1243

    1242

    683

    720

    721

    765

    s67

    686

    1063

    1108    		 Assembly1
    rna:2A:3~184 16~17,19~20,22~28,30~32
    12014 8h6k:2A
    (2.7Å)
    		 109 GO:0045131 (F) pre-mRNA branch point b...
    GO:0000348 (P) mRNA branch site recogn...
    GO:0005686 (C) U2 snRNP    		 URS00003EE995 RF00004 Homo
    sapiens
    9606    		 38658629
    1212

    1373

    504    		 Assembly1
    rna:A:7~119 31~46
    rna:6A:35~105 3~12,14
    12015 8h6k:4A
    (2.7Å)
    		 129 GO:0017070 (F) U6 snRNA binding
    GO:0000244 (P) spliceosomal tri-snRNP ...
    GO:0000353 (P) formation of quadruple ...
    GO:0005687 (C) U4 snRNP
    GO:0046540 (C) U4/U6 x U5 tri-snRNP co...    		 N/A RF00015 Homo
    sapiens
    9606    		 38658629
    995

    M156_0.6

    M025_0.6

    M077_0.6

    M158_0.6

    1368    		 Assembly1
    rna:6A:35~105 1~12,14~18,55~62
    12016 8h6k:5A
    (2.7Å)
    		 115 GO:0000244 (P) spliceosomal tri-snRNP ...
    GO:0000353 (P) formation of quadruple ...
    GO:0005682 (C) U5 snRNP
    GO:0046540 (C) U4/U6 x U5 tri-snRNP co...    		 URS000075BAAE RF00020 Homo
    sapiens
    9606    		 38658629
    1213

    M150_0.6

    1263

    42

    1267

    M158_0.6

    1355

    M025_0.6

    M075_0.6

    185

    s67

    1274

    1392

    1390    		 Assembly1
    rna:A:7~119 40~44
    12017 8h6k:6A
    (2.7Å)
    		 60 GO:0030621 (F) U4 snRNA binding
    GO:0000244 (P) spliceosomal tri-snRNP ...
    GO:0000353 (P) formation of quadruple ...
    GO:0005688 (C) U6 snRNP
    GO:0046540 (C) U4/U6 x U5 tri-snRNP co...    		 N/A RF00026 Homo
    sapiens
    9606    		 38658629
    1334

    s59

    M021_0.6    		 Assembly1
    rna:A:7~119 35~44,46
    rna:4A:1~144 51~75
    rna:2A:3~184 85~95
    12018 8h6k:A
    (2.7Å)
    		 64 N/A N/A N/A Homo
    sapiens
    9606    		 38658629
    605

    1129

    M156_0.6

    596

    995

    609

    1202

    M077_0.6

    M149_0.6

    726

    775

    s65

    1074

    798

    1039

    1018

    M012_0.6

    1015

    1094

    1096

    996

    1159

    1158

    772

    465

    1272

    611

    1098

    1135

    s95

    725

    332

    1069

    1286

    1061

    1184

    1065

    s101

    M232_0.6

    1106

    1243

    1242

    683

    720

    721

    765

    s67

    686

    1063

    1108    		 Assembly1
    rna:5A:3~117 103~107
    rna:6A:35~105 110~114,116~119
    rna:2A:3~184 16~17,19~20,22~28,30~32
    12019 8h6l:2A
    (2.6Å)
    		 109 GO:0045131 (F) pre-mRNA branch point b...
    GO:0000348 (P) mRNA branch site recogn...
    GO:0005686 (C) U2 snRNP    		 URS00003EE995 RF00004 Homo
    sapiens
    9606    		 38658629
    1212

    1373

    504    		 Assembly1
    rna:A:7~116 31~46
    rna:6A:36~105 3~12,14
    12020 8h6l:4A
    (2.6Å)
    		 129 GO:0017070 (F) U6 snRNA binding
    GO:0000244 (P) spliceosomal tri-snRNP ...
    GO:0000353 (P) formation of quadruple ...
    GO:0005687 (C) U4 snRNP
    GO:0046540 (C) U4/U6 x U5 tri-snRNP co...    		 N/A RF00015 Homo
    sapiens
    9606    		 38658629
    995

    M156_0.6

    M025_0.6

    M077_0.6

    M158_0.6

    1368    		 Assembly1
    rna:6A:36~105 1~12,14~17,55~62
    12021 8h6l:5A
    (2.6Å)
    		 115 GO:0000244 (P) spliceosomal tri-snRNP ...
    GO:0000353 (P) formation of quadruple ...
    GO:0005682 (C) U5 snRNP
    GO:0046540 (C) U4/U6 x U5 tri-snRNP co...    		 URS000075BAAE RF00020 Homo
    sapiens
    9606    		 38658629
    1213

    M150_0.6

    1263

    42

    1267

    M158_0.6

    1355

    M025_0.6

    M075_0.6

    185

    s67

    1274

    1392

    1390    		 Assembly1
    rna:A:7~116 40~44
    12022 8h6l:6A
    (2.6Å)
    		 59 GO:0030621 (F) U4 snRNA binding
    GO:0000244 (P) spliceosomal tri-snRNP ...
    GO:0000353 (P) formation of quadruple ...
    GO:0005688 (C) U6 snRNP
    GO:0046540 (C) U4/U6 x U5 tri-snRNP co...    		 N/A RF00026 Homo
    sapiens
    9606    		 38658629
    1334

    s59

    M021_0.6    		 Assembly1
    rna:A:7~116 36,38~43,46
    rna:4A:1~144 51~75
    rna:2A:3~184 85~95
    12023 8h6l:A
    (2.6Å)
    		 57 N/A N/A N/A Homo
    sapiens
    9606    		 38658629
    605

    1129

    M156_0.6

    596

    609

    1202

    M077_0.6

    M149_0.6

    726

    775

    s65

    1074

    798

    1039

    1018

    M012_0.6

    1015

    1094

    1096

    996

    1159

    1158

    772

    465

    1272

    611

    1098

    1135

    s95

    725

    332

    1069

    1286

    1061

    1184

    1065

    s101

    M232_0.6

    1106

    1243

    1242

    683

    720

    721

    765

    s67

    686

    1063

    1108    		 Assembly1
    rna:5A:3~117 102~104,106~107
    rna:6A:36~105 110~116
    rna:2A:3~184 16~17,19~20,22~28,30~32
    12024 8hb1:A
    (2.23Å)
    		 24 N/A URS00026813CC N/A Streptococcus
    parasanguinis
    1318    		 36840714 Assembly1
    rna:B:26~55 2~10,12~15,17~24
    12025 8hb1:B
    (2.23Å)
    		 30 N/A URS00026813C9 N/A Streptococcus
    parasanguinis
    1318    		 36840714 Assembly1
    rna:A:1~24 26~32,34~37,40~43,45~48,50~54
    12026 8hb3:A
    (2.87Å)
    		 24 N/A URS00026813CC N/A Streptococcus
    parasanguinis
    1318    		 36840714 Assembly1
    rna:B:26~56 2~10,12~15,17~24
    12027 8hb3:B
    (2.87Å)
    		 31 N/A URS00026813C0 N/A Streptococcus
    parasanguinis
    1318    		 36840714 Assembly1
    rna:A:1~24 26~32,34~43,45~48,50~54
    12028 8hba:A
    (2.64Å)
    		 48 N/A URS00026813CB N/A Streptococcus
    parasanguinis
    1318    		 36840714 Assembly1
    rna:B:0~55 2~3,16~17,39~40
    12029 8hba:B
    (2.64Å)
    		 50 N/A URS00026813CB N/A Streptococcus
    parasanguinis
    1318    		 36840714 Assembly1
    rna:A:1~55 2~3,16~17,39~40
    12030 8hf0:N
    (3.72Å)
    		 50 N/A URS00023358B9 N/A Drosophila
    melanogaster
    7227    		 37633971 Assembly1
    rna:P:1~47 4~51
    12031 8hf0:P
    (3.72Å)
    		 47 N/A URS00023358B9 N/A Drosophila
    melanogaster
    7227    		 37633971 Assembly1
    rna:N:3~52 1~47
    12032 8hf1:H
    (3.7Å)
    		 11 N/A URS0002681479 N/A Drosophila
    melanogaster
    7227    		 37633971 Assembly1
    rna:E:1~9 42~51
    12033 8hf1:K
    (3.7Å)
    		 11 N/A URS0002681479 N/A Drosophila
    melanogaster
    7227    		 37633971 Assembly1
    rna:J:1~9 42~51
    12034 8hf1:M
    (3.7Å)
    		 11 N/A URS0002681479 N/A Drosophila
    melanogaster
    7227    		 37633971 Assembly1
    rna:L:1~9 42~51
    12035 8hfr:1e
    (2.64Å)
    		 3274 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000061F377 RF02543 Saccharomyces
    cerevisiae
    S288C
    559292    		 37258668 Assembly1
    rna:2f:1~121 996~998,1052,1054~1055,1156,11
    71,1197,1202~1203
    rna:3n:1~156 4~23,59,330~337,339~342,345~34
    6,349,351,368~369,404~419,656~
    657,691,1394~1395,1399,1419~14
    20,1441,1530,1584,1619~1620,18
    30~1832,2386,2585,2994~2995
    12036 8hfr:2f
    (2.64Å)
    		 121 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000055688D RF00001 Saccharomyces
    cerevisiae
    S288C
    559292    		 37258668 Assembly1
    rna:1e:4~3396 79~81,86,90,100,102~104
    12037 8hfr:3n
    (2.64Å)
    		 156 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001BF64E RF00002 Saccharomyces
    cerevisiae
    S288C
    559292    		 37258668 Assembly1
    rna:1e:4~3396 1,3~13,15~22,24~33,35~37,40,53
    ~54,104,109,113~115,125~126,13
    6~155
    12038 8hke:C
    (3.71Å)
    		 37 N/A URS00029156C7 N/A Homo
    sapiens
    9606    		 38664565
    440    		 Assembly1
    rna:D:7~43 9~20,22~35,37~39
    12039 8hke:D
    (3.71Å)
    		 37 N/A URS00029156A9 N/A Homo
    sapiens
    9606    		 38664565
    440    		 Assembly1
    rna:C:8~44 12~14,16~42
    12040 8hku:A23S
    (2.72Å)
    		 2995 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000759EE6 RF02540
    RF02541
    RF02543
    RF00002    		 Sulfolobus
    acidocaldarius
    DSM
    639
    330779    		 37604686 Assembly1
    rna:A5S:1~122 998~1000,1051~1054,1123,1138,1
    163,1168
    rna:AETN:1~19 1994~1995,2022,2519~2520,2548~
    2549
    12041 8hku:A5S
    (2.72Å)
    		 122 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000056704D RF00001 Sulfolobus
    acidocaldarius
    DSM
    639
    330779    		 37604686 Assembly1
    rna:A23S:5~3021 79~82,87,91,100~102,104~105
    12042 8hku:AETN
    (2.72Å)
    		 18 GO:0030533 (F) triplet codon-amino aci... URS0002681451 RF00005 Sulfolobus
    acidocaldarius
    DSM
    639
    330779    		 37604686 Assembly1
    rna:A23S:5~3021 3,13~14,19
    12043 8hkv:A23S
    (4.94Å)
    		 2989 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000759EE6 RF02540
    RF02541
    RF02543
    RF00002    		 Sulfolobus
    acidocaldarius
    DSM
    639
    330779    		 37604686 Assembly1
    rna:A5S:1~122 998,1000~1001,1053~1054,1123,1
    137~1138,1163
    12044 8hkv:A5S
    (4.94Å)
    		 122 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000056704D RF00001 Sulfolobus
    acidocaldarius
    DSM
    639
    330779    		 37604686 Assembly1
    rna:A23S:5~3021 81~82,87,100~102,105
    12045 8hky:A16S
    (4.45Å)
    		 1493 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00009F3A78 RF01959
    RF00177
    RF01960
    RF02542    		 Sulfolobus
    acidocaldarius
    DSM
    639
    330779    		 37604686 Assembly1
    rna:A23S:5~3021 548,668,1378,1387,1444~1445,14
    55,1478
    rna:AATN:1~76 1018,1454
    rna:APTN:1~76 756,937~938,1200,1307~1308,136
    9
    rna:AETN:1~76 1308~1309
    rna:AMRN:-2~6 659,896,1370,1453~1454,1459
    12046 8hky:A23S
    (4.45Å)
    		 2996 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000759EE6 RF02540
    RF02541
    RF02543
    RF00002    		 Sulfolobus
    acidocaldarius
    DSM
    639
    330779    		 37604686 Assembly1
    rna:A16S:8~1501 849,1991,2042,2044,2048,2076~2
    077,2088~2089
    rna:AATN:1~76 2630~2631,2677~2678,2707~2708
    rna:A5S:1~122 998~1000,1052~1055,1123,1137~1
    138,1163,1168
    rna:APTN:1~76 2037,2050~2052,2372~2373,2563,
    2575,2726
    rna:AETN:1~76 1993,1997,2013~2015,2017,2021~
    2022,2241,2249,2297,2519~2520,
    2548~2549
    12047 8hky:A5S
    (4.45Å)
    		 122 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000056704D RF00001 Sulfolobus
    acidocaldarius
    DSM
    639
    330779    		 37604686 Assembly1
    rna:A23S:5~3021 79~82,87,91,100~102,104
    12048 8hky:AATN
    (4.45Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Sulfolobus
    acidocaldarius
    DSM
    639
    330779    		 37604686 Assembly1
    rna:A23S:5~3021 74~76
    rna:A16S:8~1501 34,36~37
    rna:AMRN:-2~6 34~37
    12049 8hky:AETN
    (4.45Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Sulfolobus
    acidocaldarius
    DSM
    639
    330779    		 37604686 Assembly1
    rna:A23S:5~3021 3,17~19,56,70~73,76
    12050 8hky:APTN
    (4.45Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Sulfolobus
    acidocaldarius
    DSM
    639
    330779    		 37604686 Assembly1
    rna:A23S:5~3021 12~13,25,74~76
    rna:A16S:8~1501 30~31,34,38~41
    rna:AMRN:-2~6 34~37
    12051 8hkz:A16S
    (4.78Å)
    		 1493 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00009F3A78 RF01959
    RF00177
    RF01960
    RF02542    		 Sulfolobus
    acidocaldarius
    DSM
    639
    330779    		 37604686 Assembly1
    rna:A23S:5~3021 547~548,726,757,1376~1378,1387
    ,1454~1455,1478~1479
    rna:APTN:1~76 756,937,1200,1307~1309,1369
    rna:AMRN:-2~6 756,896,1366,1370~1372,1459,14
    66
    12052 8hkz:A23S
    (4.78Å)
    		 2996 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000759EE6 RF02540
    RF02541
    RF02543
    RF00002    		 Sulfolobus
    acidocaldarius
    DSM
    639
    330779    		 37604686 Assembly1
    rna:A16S:8~1501 848~849,1861,2041~2044,2047~20
    49,2077~2078
    rna:A5S:1~122 998,1000,1052~1054,1123,1137~1
    138,1163,1168
    rna:APTN:1~76 2050~2052,2372~2374,2574~2575,
    2726
    rna:AETN:1~76 1993,1997,2014~2015,2017~2018,
    2020~2022,2241,2248~2249,2297,
    2520,2549
    12053 8hkz:A5S
    (4.78Å)
    		 122 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000056704D RF00001 Sulfolobus
    acidocaldarius
    DSM
    639
    330779    		 37604686 Assembly1
    rna:A23S:5~3021 79~82,87,91,101~102,104
    12054 8hkz:AETN
    (4.78Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Sulfolobus
    acidocaldarius
    DSM
    639
    330779    		 37604686 Assembly1
    rna:A23S:5~3021 3,17,19~20,56,70~73,76
    12055 8hkz:APTN
    (4.78Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Sulfolobus
    acidocaldarius
    DSM
    639
    330779    		 37604686 Assembly1
    rna:A23S:5~3021 13,24~25,74~76
    rna:A16S:8~1501 30~31,34,37~41
    rna:AMRN:-2~6 34~37
    12056 8hl1:A16S
    (3.93Å)
    		 1493 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00008A1CEE RF01959
    RF00177
    RF01960
    RF02542    		 Sulfolobus
    acidocaldarius
    DSM
    639
    330779    		 37604686 Assembly1
    rna:A23S:5~3021 547,668,1377,1387,1444~1445,14
    57,1478
    rna:AMRN:-4~8 659,896~897,1366,1370,1464,149
    2~1493
    12057 8hl1:A23S
    (3.93Å)
    		 2995 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000759EE6 RF02540
    RF02541
    RF02543
    RF00002    		 Sulfolobus
    acidocaldarius
    DSM
    639
    330779    		 37604686 Assembly1
    rna:A16S:8~1501 848~849,1990~1991,2041,2048,20
    76~2077,2088~2089
    rna:A5S:1~122 1000,1052~1054,1123,1137~1138,
    1163
    rna:APTN:1~76 2193,2372~2374,2574~2575,2726
    rna:AETN:1~76 2022,2241,2297,2519~2520,2548~
    2549
    12058 8hl1:A5S
    (3.93Å)
    		 122 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000056704D RF00001 Sulfolobus
    acidocaldarius
    DSM
    639
    330779    		 37604686 Assembly1
    rna:A23S:5~3021 81~82,87,100~104
    12059 8hl1:AETN
    (3.93Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Sulfolobus
    acidocaldarius
    DSM
    639
    330779    		 37604686 Assembly1
    rna:A23S:5~3021 55~56,70,76
    rna:AMRN:-4~8 34~37
    12060 8hl1:AMRN
    (3.93Å)
    		 13 N/A N/A N/A Sulfolobus
    acidocaldarius
    DSM
    639
    330779    		 37604686 Assembly1
    rna:A16S:8~1501 -4~-2,0,3~4
    rna:APTN:1~76 1~3
    rna:AETN:1~76 -2~0
    12061 8hl1:APTN
    (3.93Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Sulfolobus
    acidocaldarius
    DSM
    639
    330779    		 37604686 Assembly1
    rna:A23S:5~3021 74~76
    rna:AMRN:-4~8 34~37
    12062 8hl2:A16S
    (4.1Å)
    		 1492 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00009F3A78 RF01959
    RF00177
    RF01960
    RF02542    		 Sulfolobus
    acidocaldarius
    DSM
    639
    330779    		 37604686 Assembly1
    rna:A23S:5~3021 668,869,1377,1387,1444~1445,14
    78
    rna:APTN:1~76 756,1369
    rna:AMRN:-4~8 659,896,1366,1369~1370,1372,14
    59,1464,1466~1467
    12063 8hl2:A23S
    (4.1Å)
    		 2996 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000759EE6 RF02540
    RF02541
    RF02543
    RF00002    		 Sulfolobus
    acidocaldarius
    DSM
    639
    330779    		 37604686 Assembly1
    rna:A16S:8~1501 1976,1990~1991,2041,2048,2076~
    2077,2088~2089
    rna:A5S:1~122 999~1000,1053~1054,1123,1137~1
    138,1163,1168
    rna:APTN:1~76 2051,2372~2374,2574~2575,2726
    rna:AETN:1~76 2241,2249~2250,2297,2519~2520,
    2548~2549
    12064 8hl2:A5S
    (4.1Å)
    		 122 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000056704D RF00001 Sulfolobus
    acidocaldarius
    DSM
    639
    330779    		 37604686 Assembly1
    rna:A23S:5~3021 80~82,87,91,100~102,104
    12065 8hl2:AETN
    (4.1Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Sulfolobus
    acidocaldarius
    DSM
    639
    330779    		 37604686 Assembly1
    rna:A23S:5~3021 17,19,56,76
    12066 8hl2:AMRN
    (4.1Å)
    		 13 N/A N/A N/A Sulfolobus
    acidocaldarius
    DSM
    639
    330779    		 37604686 Assembly1
    rna:A16S:8~1501 -4~4,6~7
    rna:APTN:1~76 1~3
    12067 8hl2:APTN
    (4.1Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Sulfolobus
    acidocaldarius
    DSM
    639
    330779    		 37604686 Assembly1
    rna:A23S:5~3021 24,73~76
    rna:A16S:8~1501 34,38~39
    rna:AMRN:-4~8 34~37
    12068 8hl3:A16S
    (4.8Å)
    		 1492 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00009F3A78 RF01959
    RF00177
    RF01960
    RF02542    		 Sulfolobus
    acidocaldarius
    DSM
    639
    330779    		 37604686 Assembly1
    rna:A23S:5~3021 547,668,1387,1444,1457,1478
    rna:APTN:1~76 756,1369
    rna:AETN:1~76 1307~1308
    rna:AMRN:-4~8 1366,1369~1370,1372,1464,1492
    12069 8hl3:A23S
    (4.8Å)
    		 2996 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000759EE6 RF02540
    RF02541
    RF02543
    RF00002    		 Sulfolobus
    acidocaldarius
    DSM
    639
    330779    		 37604686 Assembly1
    rna:A16S:8~1501 848,1990~1992,2048,2088~2089
    rna:A5S:1~122 1000,1052~1054,1123,1137,1163,
    1168
    rna:APTN:1~76 2192,2372~2374,2574~2575,2726
    rna:AETN:1~76 2022,2241,2297,2518~2520,2548~
    2549
    12070 8hl3:A5S
    (4.8Å)
    		 122 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000056704D RF00001 Sulfolobus
    acidocaldarius
    DSM
    639
    330779    		 37604686 Assembly1
    rna:A23S:5~3021 79,81~82,87,91,100~102,104~105
    12071 8hl3:AETN
    (4.8Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Sulfolobus
    acidocaldarius
    DSM
    639
    330779    		 37604686 Assembly1
    rna:A23S:5~3021 19,55~56,71,76
    rna:A16S:8~1501 30~31
    rna:AMRN:-4~8 34~37
    12072 8hl3:AMRN
    (4.8Å)
    		 13 N/A N/A N/A Sulfolobus
    acidocaldarius
    DSM
    639
    330779    		 37604686 Assembly1
    rna:A16S:8~1501 -4~-3,3~4,6
    rna:APTN:1~76 1~3
    rna:AETN:1~76 -2~0
    12073 8hl3:APTN
    (4.8Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Sulfolobus
    acidocaldarius
    DSM
    639
    330779    		 37604686 Assembly1
    rna:A23S:5~3021 74~76
    rna:A16S:8~1501 34,38~39
    rna:AMRN:-4~8 34~37
    12074 8hl4:A16S
    (4.62Å)
    		 1492 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00009F3A78 RF01959
    RF00177
    RF01960
    RF02542    		 Sulfolobus
    acidocaldarius
    DSM
    639
    330779    		 37604686 Assembly1
    rna:A23S:5~3021 548,668,727,1377,1387,1444~144
    5,1457
    rna:AMRN:-2~6 659,896,1370,1459
    rna:APTN:1~76 756,937,1307~1309,1369
    12075 8hl4:A23S
    (4.62Å)
    		 2995 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000759EE6 RF02540
    RF02541
    RF02543
    RF00002    		 Sulfolobus
    acidocaldarius
    DSM
    639
    330779    		 37604686 Assembly1
    rna:A16S:8~1501 849~850,1990~1991,2024,2044,20
    48,2076~2077,2088~2089
    rna:A5S:1~122 998,1000,1053~1054,1123,1137~1
    138,1163,1167~1168
    rna:APTN:1~76 2038,2051~2052,2192,2372~2374,
    2574~2575,2726
    12076 8hl4:A5S
    (4.62Å)
    		 122 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000056704D RF00001 Sulfolobus
    acidocaldarius
    DSM
    639
    330779    		 37604686 Assembly1
    rna:A23S:5~3021 80~82,87,91,100~102,104
    12077 8hl4:APTN
    (4.62Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Sulfolobus
    acidocaldarius
    DSM
    639
    330779    		 37604686 Assembly1
    rna:A23S:5~3021 12~13,73~76
    rna:A16S:8~1501 31,34,40~41
    rna:AMRN:-2~6 34~37
    12078 8hl5:A16S
    (5.72Å)
    		 1492 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00009F3A78 RF01959
    RF00177
    RF01960
    RF02542    		 Sulfolobus
    acidocaldarius
    DSM
    639
    330779    		 37604686 Assembly1
    rna:A23S:5~3021 1387,1398~1399,1444,1478
    rna:AATN:1~76 1018,1454
    rna:APTN:1~76 756,937,1199~1200,1307~1308,13
    69
    rna:AMRN:1~6 1369~1370,1372,1453~1454,1459
    12079 8hl5:A23S
    (5.72Å)
    		 2991 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000759EE6 RF02540
    RF02541
    RF02543
    RF00002    		 Sulfolobus
    acidocaldarius
    DSM
    639
    330779    		 37604686 Assembly1
    rna:A16S:8~1501 1860~1861,2049,2088~2089
    rna:A5S:1~122 998~1001,1050~1051,1053~1054,1
    123,1137~1138,1163,1166,1168
    rna:AATN:1~76 1032~1033,2631,2677~2679,2707~
    2708
    rna:APTN:1~76 1995,2022,2241,2297,2519~2520,
    2548~2549
    12080 8hl5:A5S
    (5.72Å)
    		 122 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000056704D RF00001 Sulfolobus
    acidocaldarius
    DSM
    639
    330779    		 37604686 Assembly1
    rna:A23S:5~3021 80~82,87,91,100~102,104~105
    12081 8hl5:AATN
    (5.72Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Sulfolobus
    acidocaldarius
    DSM
    639
    330779    		 37604686 Assembly1
    rna:A23S:5~3021 56,74~76
    rna:A16S:8~1501 34,36~37
    rna:AMRN:1~6 34~37
    12082 8hl5:APTN
    (5.72Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Sulfolobus
    acidocaldarius
    DSM
    639
    330779    		 37604686 Assembly1
    rna:A23S:5~3021 18~19,56,71~72,76
    rna:A16S:8~1501 30~31,34,39~41
    rna:AMRN:1~6 34~37
    12083 8hmz:3
    (2.9Å)
    		 37 N/A URS00026813E6 N/A Homo
    sapiens
    9606    		 37028420
    M325_0.6    		 Assembly1
    rna:5:0~52 53~61,63~64,70~75,81~88
    12084 8hmz:5
    (2.9Å)
    		 45 N/A URS00026813ED N/A Homo
    sapiens
    9606    		 37028420
    21    		 Assembly1
    rna:3:53~89 0~9,15~16,18~19,21~22,26~34,50
    ~52
    12085 8hsp:A
    (2.32Å)
    		 1519 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00177
    RF01959
    RF02542
    RF01960    		 Escherichia
    coli
    562    		 38538915 Assembly1
    rna:a:1~2903 702,784,899,1407~1409,1418,142
    9,1473~1475,1483~1484,1494~149
    6,1517
    rna:V:1~76 790,966,1229~1230,1338~1340,14
    00
    rna:W:25~35 693,789,926,1196,1397,1400~140
    2,1492~1493,1498
    rna:X:1~76 530,1054,1493
    12086 8hsp:V
    (2.32Å)
    		 76 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Escherichia
    coli
    BW25113
    679895    		 38538915 Assembly1
    rna:A:2~1534 31~33,35,39,41~42
    rna:a:1~2903 12~13,25~26,74~76
    rna:W:25~35 35~38
    12087 8hsp:W
    (2.32Å)
    		 11 N/A N/A N/A Escherichia
    coli
    562    		 38538915 Assembly1
    rna:A:2~1534 25~26,28~32,35
    rna:V:1~76 28~30
    rna:X:1~76 31~34
    12088 8hsp:X
    (2.32Å)
    		 76 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Escherichia
    coli
    BW25113
    679895    		 38538915 Assembly1
    rna:A:2~1534 34~37
    rna:a:1~2903 19,37~38,52,56,63,75~76
    rna:W:25~35 34~37
    12089 8hsp:a
    (2.32Å)
    		 2753 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02541 Escherichia
    coli
    562    		 38538915 Assembly1
    rna:A:2~1534 1700~1704,1832,1837,1846,1848,
    1912~1916,1919~1920,1947~1948,
    1959~1961
    rna:b:1~119 861~863,915,917~919,958,2340
    rna:V:1~76 1907~1908,1922~1923,2064,2251~
    2253,2450~2451,2602
    rna:X:1~76 896~897,1913,2470,2482~2483,25
    06~2507,2553,2583~2584,2602
    12090 8hsp:b
    (2.32Å)
    		 119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00001 Escherichia
    coli
    562    		 38538915 Assembly1
    rna:a:1~2903 41,78~81,89,96~97,99~100
    12091 8htz:A
    (2.4Å)
    		 1519 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00177
    RF01959
    RF02542
    RF01960    		 Escherichia
    coli
    562    		 38538915 Assembly1
    rna:a:1~2903 702,783~784,899,1407~1409,1418
    ,1429,1473~1475,1483~1484,1494
    ~1496,1517
    rna:V:1~76 790,966,1229~1230,1338~1340,14
    00
    rna:W:25~35 693,789,926,1196,1397,1400~140
    2,1492~1493,1498
    rna:X:1~76 530~531,1054,1196,1493
    12092 8htz:V
    (2.4Å)
    		 76 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Escherichia
    coli
    BW25113
    679895    		 38538915 Assembly1
    rna:A:2~1534 31~33,35,39~42
    rna:a:1~2903 12~13,25~26,74~76
    rna:W:25~35 35~38
    12093 8htz:W
    (2.4Å)
    		 11 N/A N/A N/A Escherichia
    coli
    562    		 38538915 Assembly1
    rna:A:2~1534 25~26,28~32,35
    rna:V:1~76 28~30
    rna:X:1~76 31~34
    12094 8htz:X
    (2.4Å)
    		 78 N/A N/A N/A Haloarcula
    marismortui
    2238    		 38538915 Assembly1
    rna:A:2~1534 34~37
    rna:a:1~2903 19,37~38,56,75~76
    rna:W:25~35 34~37
    12095 8htz:a
    (2.4Å)
    		 2753 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02541 Escherichia
    coli
    562    		 38538915 Assembly1
    rna:A:2~1534 1700~1704,1832,1836~1837,1846,
    1848,1912~1916,1919~1920,1947~
    1948,1959~1961
    rna:b:1~119 861~863,915,917~919,958,2339~2
    340
    rna:V:1~76 1907~1908,1922~1923,2064,2251~
    2253,2450~2451,2602
    rna:X:1~76 896,1913,2506~2507,2553,2583~2
    584
    12096 8htz:b
    (2.4Å)
    		 119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00001 Escherichia
    coli
    562    		 38538915 Assembly1
    rna:a:1~2903 41,78~81,89,96~97,99~100
    12097 8hu1:A
    (2.69Å)
    		 1519 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00177
    RF01959
    RF02542
    RF01960    		 Escherichia
    coli
    562    		 38538915 Assembly1
    rna:a:1~2903 702,784,899,1407~1409,1418,142
    9,1473~1475,1483~1484,1493~149
    5,1517
    rna:V:1~76 790,966,1229~1230,1338~1340,14
    00
    rna:W:25~35 693,789,926,1196,1397,1400~140
    2,1492~1493,1498
    rna:X:1~76 530,1054,1493
    12098 8hu1:V
    (2.69Å)
    		 76 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Escherichia
    coli
    BW25113
    679895    		 38538915 Assembly1
    rna:A:2~1534 31~33,35,39,41~42
    rna:a:1~2903 12,25~26,74~76
    rna:W:25~35 35~38
    12099 8hu1:W
    (2.69Å)
    		 11 N/A N/A N/A Escherichia
    coli
    562    		 38538915 Assembly1
    rna:A:2~1534 25~26,28~32,35
    rna:V:1~76 28~30
    rna:X:1~76 31~34
    12100 8hu1:X
    (2.69Å)
    		 76 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Escherichia
    coli
    BW25113
    679895    		 38538915 Assembly1
    rna:A:2~1534 34~37
    rna:a:1~2903 19~20,37~38,52,56,63,75~76
    rna:W:25~35 34~37
    << < 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 > >>
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    Reference:
  • Chengxin Zhang, Lydia Freddolino (2024) "FURNA: a database for function annotations of RNA structures," PLOS Biology 22(7): e3002476.