SEQ2FUN

FURNA
Download all results in tab-seperated text for 16611 RNAs.
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    # PDB
    (Resolution)
    Length EC number
    & GO term
    RNAcentral Rfam Taxon PubMed ATtRACT
    motif
    Ligand &
    binding nucleotides
    12101 8hmz:3
    (2.9Å)

    37 N/A URS00026813E6 N/A Homo
    sapiens

    9606
    37028420
    M325_0.6
    Assembly1
    rna:5:0~52 53~61,63~64,70~75,81~88
    12102 8hmz:5
    (2.9Å)

    45 N/A URS00026813ED N/A Homo
    sapiens

    9606
    37028420
    21
    Assembly1
    rna:3:53~89 0~9,15~16,18~19,21~22,26~34,50
    ~52
    12103 8hsp:A
    (2.32Å)

    1519 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00000ABFE9 RF00177 Escherichia
    coli

    562
    38538915 Assembly1
    rna:a:1~2903 702,784,899,1407~1409,1418,142
    9,1473~1475,1483~1484,1494~149
    6,1517

    rna:V:1~76 790,966,1229~1230,1338~1340,14
    00

    rna:W:25~35 693,789,926,1196,1397,1400~140
    2,1492~1493,1498

    rna:X:1~76 530,1054,1493
    12104 8hsp:V
    (2.32Å)

    76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS000037E2FF RF00005 Escherichia
    coli
    BW25113

    679895
    38538915 Assembly1
    rna:A:2~1534 31~33,35,39,41~42
    rna:a:1~2903 12~13,25~26,74~76
    rna:W:25~35 35~38
    12105 8hsp:W
    (2.32Å)

    11 N/A N/A N/A Escherichia
    coli

    562
    38538915 Assembly1
    rna:A:2~1534 25~26,28~32,35
    rna:V:1~76 28~30
    rna:X:1~76 31~34
    12106 8hsp:X
    (2.32Å)

    76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS0000A5D63C RF00005 Escherichia
    coli
    BW25113

    679895
    38538915 Assembly1
    rna:A:2~1534 34~37
    rna:a:1~2903 19,37~38,52,56,63,75~76
    rna:W:25~35 34~37
    12107 8hsp:a
    (2.32Å)

    2753 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00004B0F34 RF02541 Escherichia
    coli

    562
    38538915 Assembly1
    rna:A:2~1534 1700~1704,1832,1837,1846,1848,
    1912~1916,1919~1920,1947~1948,
    1959~1961

    rna:b:1~119 861~863,915,917~919,958,2340
    rna:V:1~76 1907~1908,1922~1923,2064,2251~
    2253,2450~2451,2602

    rna:X:1~76 896~897,1913,2470,2482~2483,25
    06~2507,2553,2583~2584,2602
    12108 8hsp:b
    (2.32Å)

    119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS0000049E57 RF00001 Escherichia
    coli

    562
    38538915 Assembly1
    rna:a:1~2903 41,78~81,89,96~97,99~100
    12109 8htz:A
    (2.4Å)

    1519 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00000ABFE9 RF00177 Escherichia
    coli

    562
    38538915 Assembly1
    rna:a:1~2903 702,783~784,899,1407~1409,1418
    ,1429,1473~1475,1483~1484,1494
    ~1496,1517

    rna:V:1~76 790,966,1229~1230,1338~1340,14
    00

    rna:W:25~35 693,789,926,1196,1397,1400~140
    2,1492~1493,1498

    rna:X:1~76 530~531,1054,1196,1493
    12110 8htz:V
    (2.4Å)

    76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS000037E2FF RF00005 Escherichia
    coli
    BW25113

    679895
    38538915 Assembly1
    rna:A:2~1534 31~33,35,39~42
    rna:a:1~2903 12~13,25~26,74~76
    rna:W:25~35 35~38
    12111 8htz:W
    (2.4Å)

    11 N/A N/A N/A Escherichia
    coli

    562
    38538915 Assembly1
    rna:A:2~1534 25~26,28~32,35
    rna:V:1~76 28~30
    rna:X:1~76 31~34
    12112 8htz:X
    (2.4Å)

    78 GO:0030533 (F) triplet codon-amino aci... URS0002915739 RF00005 Haloarcula
    marismortui

    2238
    38538915 Assembly1
    rna:A:2~1534 34~37
    rna:a:1~2903 19,37~38,56,75~76
    rna:W:25~35 34~37
    12113 8htz:a
    (2.4Å)

    2753 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00004B0F34 RF02541 Escherichia
    coli

    562
    38538915 Assembly1
    rna:A:2~1534 1700~1704,1832,1836~1837,1846,
    1848,1912~1916,1919~1920,1947~
    1948,1959~1961

    rna:b:1~119 861~863,915,917~919,958,2339~2
    340

    rna:V:1~76 1907~1908,1922~1923,2064,2251~
    2253,2450~2451,2602

    rna:X:1~76 896,1913,2506~2507,2553,2583~2
    584
    12114 8htz:b
    (2.4Å)

    119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS0000049E57 RF00001 Escherichia
    coli

    562
    38538915 Assembly1
    rna:a:1~2903 41,78~81,89,96~97,99~100
    12115 8hu1:A
    (2.69Å)

    1519 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00000ABFE9 RF00177 Escherichia
    coli

    562
    38538915 Assembly1
    rna:a:1~2903 702,784,899,1407~1409,1418,142
    9,1473~1475,1483~1484,1493~149
    5,1517

    rna:V:1~76 790,966,1229~1230,1338~1340,14
    00

    rna:W:25~35 693,789,926,1196,1397,1400~140
    2,1492~1493,1498

    rna:X:1~76 530,1054,1493
    12116 8hu1:V
    (2.69Å)

    76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS000037E2FF RF00005 Escherichia
    coli
    BW25113

    679895
    38538915 Assembly1
    rna:A:2~1534 31~33,35,39,41~42
    rna:a:1~2903 12,25~26,74~76
    rna:W:25~35 35~38
    12117 8hu1:W
    (2.69Å)

    11 N/A N/A N/A Escherichia
    coli

    562
    38538915 Assembly1
    rna:A:2~1534 25~26,28~32,35
    rna:V:1~76 28~30
    rna:X:1~76 31~34
    12118 8hu1:X
    (2.69Å)

    76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS0000A5D63C RF00005 Escherichia
    coli
    BW25113

    679895
    38538915 Assembly1
    rna:A:2~1534 34~37
    rna:a:1~2903 19~20,37~38,52,56,63,75~76
    rna:W:25~35 34~37
    12119 8hu1:a
    (2.69Å)

    2753 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00004B0F34 RF02541 Escherichia
    coli

    562
    38538915 Assembly1
    rna:A:2~1534 1689,1700~1704,1832,1837,1846,
    1848,1912~1916,1919~1920,1947~
    1948,1959~1961

    rna:b:1~119 861~864,915,917~919,958,2339~2
    340

    rna:V:1~76 1922~1923,2251~2253,2450~2451,
    2602

    rna:X:1~76 896,1913,2470,2482~2483,2506~2
    507,2553,2583~2584,2602
    12120 8hu1:b
    (2.69Å)

    119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS0000049E57 RF00001 Escherichia
    coli

    562
    38538915 Assembly1
    rna:a:1~2903 41,78~81,89,96~97,99~100
    12121 8hzd:A
    (1.87Å)

    36 N/A URS00029EB306 N/A synthetic
    construct

    32630
    38816645 Assembly1
    rna:B:1~36 7~8,19~21,23~26
    12122 8hzd:B
    (1.87Å)

    36 N/A URS00029EB306 N/A synthetic
    construct

    32630
    38816645 Assembly1
    rna:A:1~36 7~8,19~21,23~26
    12123 8hze:B
    (1.59Å)

    35 N/A URS00029EB36F N/A synthetic
    construct

    32630
    38816645 Assembly1
    rna:A:2~36 30~31
    12124 8hzf:A
    (2.7Å)

    35 N/A URS00029EB36F N/A synthetic
    construct

    32630
    38816645 Assembly1
    rna:B:2~36 7~8,19,21,23~26
    12125 8hzf:B
    (2.7Å)

    35 N/A URS00029EB36F N/A synthetic
    construct

    32630
    38816645 Assembly1
    rna:A:2~36 7,20~21,23~26
    12126 8hzj:A
    (2.6Å)

    35 N/A URS00029EB36F N/A synthetic
    construct

    32630
    38816645 Assembly1
    rna:B:2~36 7,20~21,23~26
    12127 8hzj:B
    (2.6Å)

    35 N/A URS00029EB36F N/A synthetic
    construct

    32630
    38816645 Assembly1
    rna:A:2~36 7~8,20~21,23~26
    12128 8hzk:A
    (2.0Å)

    36 N/A URS00029EB306 N/A synthetic
    construct

    32630
    38816645 Assembly1
    rna:B:1~36 20,23,25~26
    12129 8hzk:B
    (2.0Å)

    36 N/A URS00029EB306 N/A synthetic
    construct

    32630
    38816645 Assembly1
    rna:A:1~36 19~20,25~27
    12130 8hzl:A
    (2.6Å)

    84 N/A URS00029EB379 N/A synthetic
    construct

    32630
    38816645 Assembly1
    rna:B-2:1~84 18,74
    12131 8hzl:B
    (2.6Å)

    84 N/A URS00029EB379 N/A synthetic
    construct

    32630
    38816645 Assembly1
    rna:A:1~84 18,74~75
    12132 8hzm:A
    (2.5Å)

    35 N/A URS00029EB36F N/A synthetic
    construct

    32630
    38816645 Assembly1
    rna:B:2~36 7~8,19~21,24~26
    12133 8hzm:B
    (2.5Å)

    35 N/A URS00029EB36F N/A synthetic
    construct

    32630
    38816645 Assembly1
    rna:A:2~36 7,20~21,23~26
    12134 8i0p:B
    (3.4Å)

    98 GO:0000244 (P) spliceosomal tri-snRNP ...
    GO:0000353 (P) formation of quadruple ...
    GO:0005682 (C) U5 snRNP
    GO:0046540 (C) U4/U6 x U5 tri-snRNP co...
    URS000075BAAE RF00020 Homo
    sapiens

    9606
    39068178
    1213

    1339

    M150_0.6

    1263

    1267

    42

    M158_0.6

    1355

    M025_0.6

    M075_0.6

    185

    s67

    1291

    1274

    1392

    1390
    Assembly1
    rna:G:-8~116 40~44
    12135 8i0p:F
    (3.4Å)

    95 GO:0030621 (F) U4 snRNA binding
    GO:0000244 (P) spliceosomal tri-snRNP ...
    GO:0000353 (P) formation of quadruple ...
    GO:0005688 (C) U6 snRNP
    GO:0046540 (C) U4/U6 x U5 tri-snRNP co...
    URS00001EC8D7 RF00026 Homo
    sapiens

    9606
    39068178
    1334

    1124

    s59

    M021_0.6
    Assembly1
    rna:G:-8~116 29~46
    rna:H:3~184 53~56,78,81~95
    12136 8i0p:G
    (3.4Å)

    63 N/A N/A N/A unidentified
    adenovirus

    10535
    39068178 Assembly1
    rna:B:8~117 -4~0
    rna:F:1~95 3~11,13~17
    rna:H:3~184 85~88,90~95,98~100
    12137 8i0p:H
    (3.4Å)

    165 GO:0045131 (F) pre-mRNA branch point b...
    GO:0000348 (P) mRNA branch site recogn...
    GO:0005686 (C) U2 snRNP
    URS00003EE995 RF00004 Homo
    sapiens

    9606
    39068178
    1212

    M037_0.6

    1384

    1373

    M068_0.6

    1290

    504
    Assembly1
    rna:F:1~95 3~17,19~22,25
    rna:G:-8~116 31~45
    12138 8i0r:B
    (3.0Å)

    98 GO:0000244 (P) spliceosomal tri-snRNP ...
    GO:0000353 (P) formation of quadruple ...
    GO:0005682 (C) U5 snRNP
    GO:0046540 (C) U4/U6 x U5 tri-snRNP co...
    URS000075BAAE RF00020 Homo
    sapiens

    9606
    39068178
    1213

    1339

    M150_0.6

    1263

    1267

    42

    M158_0.6

    1355

    M025_0.6

    M075_0.6

    185

    s67

    1291

    1274

    1392

    1390
    Assembly1
    rna:F:1~97 42~43
    rna:G:-12~116 40~44
    12139 8i0r:F
    (3.0Å)

    97 GO:0030621 (F) U4 snRNA binding
    GO:0000244 (P) spliceosomal tri-snRNP ...
    GO:0000353 (P) formation of quadruple ...
    GO:0005688 (C) U6 snRNP
    GO:0046540 (C) U4/U6 x U5 tri-snRNP co...
    URS00001EC8D7 RF00026 Homo
    sapiens

    9606
    39068178
    1334

    1124

    s59

    M021_0.6
    Assembly1
    rna:B:8~117 67,69~70
    rna:G:-12~116 27,29~36,38~45,71,73
    rna:H:1~184 47,49~56,81~97
    12140 8i0r:G
    (3.0Å)

    71 N/A N/A N/A unidentified
    adenovirus

    10535
    39068178 Assembly1
    rna:B:8~117 -4~0
    rna:F:1~97 -1,3~17
    rna:H:1~184 85~88,90~96,98~99
    12141 8i0r:H
    (3.0Å)

    167 GO:0045131 (F) pre-mRNA branch point b...
    GO:0000348 (P) mRNA branch site recogn...
    GO:0005686 (C) U2 snRNP
    URS00003EE995 RF00004 Homo
    sapiens

    9606
    39068178
    1212

    M037_0.6

    1384

    1373

    M068_0.6

    1290

    504
    Assembly1
    rna:F:1~97 1~12,14~16,18~22,25~29
    rna:G:-12~116 32~45
    12142 8i0s:B
    (4.2Å)

    98 GO:0000244 (P) spliceosomal tri-snRNP ...
    GO:0000353 (P) formation of quadruple ...
    GO:0005682 (C) U5 snRNP
    GO:0046540 (C) U4/U6 x U5 tri-snRNP co...
    URS000075BAAE RF00020 Homo
    sapiens

    9606
    39068178
    1213

    1339

    M150_0.6

    1263

    1267

    42

    M158_0.6

    1355

    M025_0.6

    M075_0.6

    185

    s67

    1291

    1274

    1392

    1390
    Assembly1
    rna:F:1~97 42~43
    rna:G:-12~117 40~44
    12143 8i0s:F
    (4.2Å)

    97 GO:0030621 (F) U4 snRNA binding
    GO:0000244 (P) spliceosomal tri-snRNP ...
    GO:0000353 (P) formation of quadruple ...
    GO:0005688 (C) U6 snRNP
    GO:0046540 (C) U4/U6 x U5 tri-snRNP co...
    URS00001EC8D7 RF00026 Homo
    sapiens

    9606
    39068178
    1334

    1124

    s59

    M021_0.6
    Assembly1
    rna:B:8~117 67,69~70
    rna:G:-12~117 29~36,38~45,71,73
    rna:H:1~184 48~50,52~56,74,81~97
    12144 8i0s:G
    (4.2Å)

    72 N/A N/A N/A unidentified
    adenovirus

    10535
    39068178 Assembly1
    rna:B:8~117 -4~0
    rna:F:1~97 -1,3~17
    rna:H:1~184 85~88,90~96,98~100
    12145 8i0s:H
    (4.2Å)

    167 GO:0045131 (F) pre-mRNA branch point b...
    GO:0000348 (P) mRNA branch site recogn...
    GO:0005686 (C) U2 snRNP
    URS00003EE995 RF00004 Homo
    sapiens

    9606
    39068178
    1212

    M037_0.6

    1384

    1373

    M068_0.6

    1290

    504
    Assembly1
    rna:F:1~97 1~12,14~22,25~28
    rna:G:-12~117 32~45
    12146 8i0t:B
    (3.0Å)

    98 GO:0000244 (P) spliceosomal tri-snRNP ...
    GO:0000353 (P) formation of quadruple ...
    GO:0005682 (C) U5 snRNP
    GO:0046540 (C) U4/U6 x U5 tri-snRNP co...
    URS000075BAAE RF00020 Homo
    sapiens

    9606
    39068178
    1213

    1339

    M150_0.6

    1263

    1267

    42

    M158_0.6

    1355

    M025_0.6

    M075_0.6

    185

    s67

    1291

    1274

    1392

    1390
    Assembly1
    rna:F:1~97 42~43
    rna:G:-12~117 40~44
    12147 8i0t:F
    (3.0Å)

    97 GO:0030621 (F) U4 snRNA binding
    GO:0000244 (P) spliceosomal tri-snRNP ...
    GO:0000353 (P) formation of quadruple ...
    GO:0005688 (C) U6 snRNP
    GO:0046540 (C) U4/U6 x U5 tri-snRNP co...
    URS00001EC8D7 RF00026 Homo
    sapiens

    9606
    39068178
    1334

    1124

    s59

    M021_0.6
    Assembly1
    rna:B:8~117 67,69~70
    rna:G:-12~117 29~36,38~45,71,73
    rna:H:1~184 48~50,52~56,74,81~97
    12148 8i0t:G
    (3.0Å)

    72 N/A N/A N/A unidentified
    adenovirus

    10535
    39068178 Assembly1
    rna:B:8~117 -4~0
    rna:F:1~97 -1,3~17
    rna:H:1~184 85~88,90~96,98~100
    12149 8i0t:H
    (3.0Å)

    167 GO:0045131 (F) pre-mRNA branch point b...
    GO:0000348 (P) mRNA branch site recogn...
    GO:0005686 (C) U2 snRNP
    URS00003EE995 RF00004 Homo
    sapiens

    9606
    39068178
    1212

    M037_0.6

    1384

    1373

    M068_0.6

    1290

    504
    Assembly1
    rna:F:1~97 1~12,14~22,25~28
    rna:G:-12~117 32~45
    12150 8i0u:B
    (3.3Å)

    98 GO:0000244 (P) spliceosomal tri-snRNP ...
    GO:0000353 (P) formation of quadruple ...
    GO:0005682 (C) U5 snRNP
    GO:0046540 (C) U4/U6 x U5 tri-snRNP co...
    URS000075BAAE RF00020 Homo
    sapiens

    9606
    39068178
    1213

    1339

    M150_0.6

    1263

    1267

    42

    M158_0.6

    1355

    M025_0.6

    M075_0.6

    185

    s67

    1291

    1274

    1392

    1390
    Assembly1
    rna:F:1~97 42~43
    rna:G:-12~117 40~44
    12151 8i0u:F
    (3.3Å)

    97 GO:0030621 (F) U4 snRNA binding
    GO:0000244 (P) spliceosomal tri-snRNP ...
    GO:0000353 (P) formation of quadruple ...
    GO:0005688 (C) U6 snRNP
    GO:0046540 (C) U4/U6 x U5 tri-snRNP co...
    URS00001EC8D7 RF00026 Homo
    sapiens

    9606
    39068178
    1334

    1124

    s59

    M021_0.6
    Assembly1
    rna:B:8~117 67,69~70
    rna:G:-12~117 29~33,35~36,38~45,73
    rna:H:1~184 47~56,78,82~83,87~97
    12152 8i0u:G
    (3.3Å)

    79 N/A N/A N/A Homo
    sapiens

    9606
    39068178
    605

    1129

    M156_0.6

    596

    609

    332

    M077_0.6

    175

    M149_0.6

    726

    775

    s65

    1074

    798

    1039

    1018

    M012_0.6

    1015

    1094

    1096

    996

    1159

    1158

    772

    465

    611

    1098

    1135

    s95

    725

    765

    1069

    1286

    1061

    1063

    1065

    s101

    M232_0.6

    1106

    1243

    1242

    683

    720

    721

    s67

    686

    1108
    Assembly1
    rna:B:8~117 -4~0
    rna:F:1~97 3~17
    rna:H:1~184 85~88,90~96,98~100
    12153 8i0u:H
    (3.3Å)

    167 GO:0045131 (F) pre-mRNA branch point b...
    GO:0000348 (P) mRNA branch site recogn...
    GO:0005686 (C) U2 snRNP
    URS00003EE995 RF00004 Homo
    sapiens

    9606
    39068178
    1212

    M037_0.6

    1384

    1373

    M068_0.6

    1290

    504
    Assembly1
    rna:F:1~97 1~11,16~17,19~22,25~29
    rna:G:-12~117 32~45
    12154 8i0v:B
    (3.0Å)

    98 GO:0000244 (P) spliceosomal tri-snRNP ...
    GO:0000353 (P) formation of quadruple ...
    GO:0005682 (C) U5 snRNP
    GO:0046540 (C) U4/U6 x U5 tri-snRNP co...
    URS000075BAAE RF00020 Homo
    sapiens

    9606
    39068178
    1213

    1339

    M150_0.6

    1263

    1267

    42

    M158_0.6

    1355

    M025_0.6

    M075_0.6

    185

    s67

    1291

    1274

    1392

    1390
    Assembly1
    rna:F:1~97 42~43
    rna:G:-12~117 40~44
    12155 8i0v:F
    (3.0Å)

    97 GO:0030621 (F) U4 snRNA binding
    GO:0000244 (P) spliceosomal tri-snRNP ...
    GO:0000353 (P) formation of quadruple ...
    GO:0005688 (C) U6 snRNP
    GO:0046540 (C) U4/U6 x U5 tri-snRNP co...
    URS00001EC8D7 RF00026 Homo
    sapiens

    9606
    39068178
    1334

    1124

    s59

    M021_0.6
    Assembly1
    rna:B:8~117 67,69
    rna:G:-12~117 29~33,35~36,38~45,73
    rna:H:1~184 47~56,78,82~83,87~97
    12156 8i0v:G
    (3.0Å)

    79 N/A N/A N/A Homo
    sapiens

    9606
    39068178
    605

    1129

    M156_0.6

    596

    609

    332

    M077_0.6

    175

    M149_0.6

    726

    775

    s65

    1074

    798

    1039

    1018

    M012_0.6

    1015

    1094

    1096

    996

    1159

    1158

    772

    465

    611

    1098

    1135

    s95

    725

    765

    1069

    1286

    1061

    1063

    1065

    s101

    M232_0.6

    1106

    1243

    1242

    683

    720

    721

    s67

    686

    1108
    Assembly1
    rna:B:8~117 -4~0
    rna:F:1~97 3~17
    rna:H:1~184 86~88,90~95,98~100
    12157 8i0v:H
    (3.0Å)

    151 GO:0045131 (F) pre-mRNA branch point b...
    GO:0000348 (P) mRNA branch site recogn...
    GO:0005686 (C) U2 snRNP
    URS00003EE995 RF00004 Homo
    sapiens

    9606
    39068178
    1212

    M037_0.6

    1373

    M068_0.6

    1290

    504
    Assembly1
    rna:F:1~97 1~11,16~17,19~22,25~29
    rna:G:-12~117 31,33~44
    12158 8i0w:6
    (3.4Å)

    70 N/A N/A N/A unidentified
    adenovirus

    10535
    39068178 Assembly1
    rna:F:1~97 1,3~14,16~17
    rna:H:1~184 83,85~88,91~96,98~100
    12159 8i0w:B
    (3.4Å)

    98 GO:0000244 (P) spliceosomal tri-snRNP ...
    GO:0000353 (P) formation of quadruple ...
    GO:0005682 (C) U5 snRNP
    GO:0046540 (C) U4/U6 x U5 tri-snRNP co...
    URS000075BAAE RF00020 Homo
    sapiens

    9606
    39068178
    1213

    1339

    M150_0.6

    1263

    1267

    42

    M158_0.6

    1355

    M025_0.6

    M075_0.6

    185

    s67

    1291

    1274

    1392

    1390
    Assembly1
    rna:F:1~97 42~43
    rna:G:-23~-1 40~44
    12160 8i0w:F
    (3.4Å)

    97 GO:0030621 (F) U4 snRNA binding
    GO:0000244 (P) spliceosomal tri-snRNP ...
    GO:0000353 (P) formation of quadruple ...
    GO:0005688 (C) U6 snRNP
    GO:0046540 (C) U4/U6 x U5 tri-snRNP co...
    URS00001EC8D7 RF00026 Homo
    sapiens

    9606
    39068178
    1334

    1124

    s59

    M021_0.6
    Assembly1
    rna:B:8~117 67,69~70
    rna:6:1~107 29~30,32~36,38~45,73~74
    rna:H:1~184 47~56,78~79,82~83,87~97
    12161 8i0w:G
    (3.4Å)

    18 N/A N/A N/A unidentified
    adenovirus

    10535
    39068178 Assembly1
    rna:B:8~117 -5~-1
    12162 8i0w:H
    (3.4Å)

    139 GO:0045131 (F) pre-mRNA branch point b...
    GO:0000348 (P) mRNA branch site recogn...
    GO:0005686 (C) U2 snRNP
    URS00003EE995 RF00004 Homo
    sapiens

    9606
    39068178
    1212

    1340

    1110

    1373

    M068_0.6

    504
    Assembly1
    rna:F:1~97 1,3~12,16~17,19~22,25~28
    rna:6:1~107 31~39,41~46
    12163 8i3z:A
    (1.67Å)

    24 N/A URS00026813CC N/A Streptococcus
    parasanguinis

    1318
    36840714 Assembly1
    rna:B:26~56 2~10,12~15,17~24
    12164 8i3z:B
    (1.67Å)

    31 N/A URS00026813C0 N/A Streptococcus
    parasanguinis

    1318
    36840714 Assembly1
    rna:A:1~24 26~32,34~43,45~48,50~54
    12165 8i9p:C1
    (3.0Å)

    1307 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00026813FF RF02543 Thermochaetoides
    thermophila
    DSM
    1495

    759272
    37129998 Assembly1
    rna:C2:1~306 3~23,59,138,322~329,331~334,33
    7~338,341,360~361,390,396~412,
    615,643~644,678,1376~1377,1381
    ,1400~1402,1423
    12166 8i9p:C2
    (3.0Å)

    256 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS0002681403 RF00002 Thermochaetoides
    thermophila
    DSM
    1495

    759272
    37129998 Assembly1
    rna:C1:3~3337 3~22,24~37,40,104,136~150,152~
    156
    12167 8i9r:C1
    (3.1Å)

    2048 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00026813FF RF02543 Thermochaetoides
    thermophila
    DSM
    1495

    759272
    37129998 Assembly1
    rna:C2:1~232 4~23,59,138,322~329,331~334,33
    7~338,341,343,346~347,360~361,
    390,396~412,615,643~644,678,13
    76~1377,1381,1400~1402,1423,29
    53
    12168 8i9r:C2
    (3.1Å)

    228 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS0002681402 RF00002 Thermochaetoides
    thermophila
    DSM
    1495

    759272
    37129998 Assembly1
    rna:C1:3~3337 1,3~13,15~22,24~37,40~41,53,10
    4,136,138~150,152~155
    12169 8i9t:C1
    (3.6Å)

    2132 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00026813FF RF02543 Thermochaetoides
    thermophila
    DSM
    1495

    759272
    37129998 Assembly1
    rna:C2:1~158 3~23,59,138,322~329,331~334,33
    7~338,341,360~361,390,396~411,
    615,643~644,678,1376~1377,1381
    ,1401~1402,2348,2952~2953
    12170 8i9t:C2
    (3.6Å)

    158 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS0002681402 RF00002 Thermochaetoides
    thermophila
    DSM
    1495

    759272
    37129998 Assembly1
    rna:C1:3~3337 1,3~22,24~37,40,104,136,138~15
    0,152~156
    12171 8i9v:C1
    (3.1Å)

    2152 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00026813FF RF02543 Thermochaetoides
    thermophila
    DSM
    1495

    759272
    37129998 Assembly1
    rna:C2:1~158 3~23,59,138,322~329,331~334,33
    7~338,341,360~361,390,396~411,
    614~615,643~644,678,1376~1377,
    1381,1401~1402,1423,2348,2952~
    2953
    12172 8i9v:C2
    (3.1Å)

    158 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS0002681402 RF00002 Thermochaetoides
    thermophila
    DSM
    1495

    759272
    37129998 Assembly1
    rna:C1:3~3337 1,3~22,24~37,40~41,104,136~150
    ,152~156
    12173 8i9w:C1
    (3.1Å)

    2163 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00026813FF RF02543 Thermochaetoides
    thermophila
    DSM
    1495

    759272
    37129998 Assembly1
    rna:C2:1~306 4~23,59,138,322~329,331~334,33
    7~338,341,343,360~361,396~411,
    643~644,678,1376~1377,1381,140
    0~1402,1423,2348,2952~2953
    12174 8i9w:C2
    (3.1Å)

    256 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS0002681404 RF00002 Thermochaetoides
    thermophila
    DSM
    1495

    759272
    37129998 Assembly1
    rna:C1:3~3337 1,3~22,24~37,40,53~54,104,136~
    150,152~155
    12175 8i9x:C1
    (2.8Å)

    2658 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00026813FF RF02543 Thermochaetoides
    thermophila
    DSM
    1495

    759272
    37129998 Assembly1
    rna:C2:1~306 4~23,59,138,322~329,331~334,33
    7~338,341,343,360~361,396~411,
    643~644,678,1376~1377,1381,140
    1~1402,1423~1424,1540,1563,159
    7~1599,1806,1809~1811,2348~234
    9,2952~2953
    12176 8i9x:C2
    (2.8Å)

    256 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS0002681404 RF00002 Thermochaetoides
    thermophila
    DSM
    1495

    759272
    37129998 Assembly1
    rna:C1:3~3337 1~22,24~37,40,53~54,104,109,11
    3~115,125,128~129,136~150,152~
    155
    12177 8i9y:C1
    (3.1Å)

    2609 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00026813FF RF02543 Thermochaetoides
    thermophila
    DSM
    1495

    759272
    37129998 Assembly1
    rna:C2:1~306 3~23,59,138,322~329,331~334,33
    7~338,341,343,360~361,396~411,
    643~644,678,1376~1377,1380~138
    1,1401~1402,1423,1540,1563,159
    7~1598,1809~1811,2348,2952~295
    3
    12178 8i9y:C2
    (3.1Å)

    256 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS0002681404 RF00002 Thermochaetoides
    thermophila
    DSM
    1495

    759272
    37129998 Assembly1
    rna:C1:3~3337 1,3~22,24~37,40,53~54,104,109,
    113~115,128,136~150,152~156
    12179 8i9z:C1
    (2.7Å)

    2787 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00026813FF RF02543 Thermochaetoides
    thermophila
    DSM
    1495

    759272
    37129998 Assembly1
    rna:C2:1~306 3~23,59,138,322~329,331~334,33
    7~338,341,343,360~361,396~411,
    643~644,678,1376~1377,1381,140
    0~1402,1423~1424,1540,1563,159
    7~1599,1806,1809~1811,2348~234
    9,2952~2953
    12180 8i9z:C2
    (2.7Å)

    256 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS0002681404 RF00002 Thermochaetoides
    thermophila
    DSM
    1495

    759272
    37129998 Assembly1
    rna:C1:3~3337 1~22,24~37,40,53~54,104,109,11
    3~115,125,128,136~150,152~156
    12181 8ia0:C1
    (2.7Å)

    2928 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00026813FF RF02543 Thermochaetoides
    thermophila
    DSM
    1495

    759272
    37129998 Assembly1
    rna:C2:1~306 4~23,59,138,322~329,331~334,33
    6~338,341,343,360~361,396~411,
    643~644,678,1376~1377,1380~138
    1,1401~1402,1423~1424,1540,156
    3,1598,1809~1811,2348~2349,295
    2~2953
    12182 8ia0:C2
    (2.7Å)

    256 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS0002681404 RF00002 Thermochaetoides
    thermophila
    DSM
    1495

    759272
    37129998 Assembly1
    rna:C1:3~3337 1~22,24~33,35~37,40~41,53~54,1
    04,109,113~115,128,136~150,152
    ~155
    12183 8id2:C
    (1.8Å)

    24 N/A URS00023358B8 N/A Homo
    sapiens

    9606
    37094335 Assembly1
    rna:D:1~24 1,24
    12184 8id2:D
    (1.8Å)

    24 N/A URS00023358B8 N/A Homo
    sapiens

    9606
    37094335 Assembly1
    rna:C:1~24 1,24
    12185 8idt:2
    (2.8Å)

    3524 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS000268145C RF02543 Homo
    sapiens

    9606
    37491604
    M054_0.6

    1306

    769

    1302

    1303

    762

    872

    1148

    1149

    764

    M149_0.6

    167

    21

    1079

    930

    1029

    1075

    1072

    1073

    s77

    1071

    819

    1373

    938

    546

    s52

    M012_0.6

    931

    813

    936

    s59

    995

    994

    595

    1314

    991

    1312

    1311

    1028

    1150

    123

    124

    125

    1068

    s72

    1060

    s100

    s102

    52

    533

    M227_0.6

    1384

    375

    926

    822

    1128

    988

    1321

    708

    705

    1328

    707

    1124

    987

    703

    M077_0.6

    1237

    83

    1181

    797

    796

    795

    836

    837

    791

    790

    838

    1334

    s70

    1016

    1017

    1393

    610

    1012

    1013

    1236

    M290_0.6

    763

    1231

    1232

    1233

    1335

    s17

    M109_0.6

    1336

    1331

    1333

    589

    776

    s96

    s99

    M273_0.6

    1389

    902

    821

    900

    901

    906

    33

    924

    970

    M044_0.6

    1245

    s64

    s62

    s61

    1227

    883

    M035_0.6

    1223

    M156_0.6

    604

    M320_0.6

    1347

    60

    s81

    M349_0.6

    1083

    175

    1026

    100

    977

    976

    974

    853

    M154_0.6

    884

    s55

    979

    M153_0.6

    183

    1238

    185

    1375

    815

    1036

    503

    1034

    1035

    1212

    M102_0.6

    1211

    1216

    1042

    986

    s50

    1354

    M103_0.6

    169

    91

    1127

    M070_0.6

    M272_0.6

    M020_0.6

    M050_0.6

    1187

    1182

    1183

    1037

    727

    M347_0.6

    722

    935

    M086_0.6

    1164

    1165

    1166

    606

    886

    156

    748

    749

    608

    M061_0.6

    s48

    1055

    878

    879

    1059

    953

    952

    42

    954

    870

    1107

    1352

    774

    1215

    M104_0.6

    1173

    770

    773

    958

    1271

    1272

    1273

    779

    778

    1178

    M151_0.6

    78

    1285

    M083_0.6

    1041

    1040

    1043

    1045

    1044

    706

    1360

    684

    800

    1368
    Assembly1
    rna:5:1~120 1736~1738,1792,1794~1796,1894,
    1909,1936,1941~1942

    rna:8:1~156 2~22,58,339,342~348,350~353,35
    6~357,360,362,379~380,415~419,
    421~430,1305,1333~1334,1371,23
    08~2309,2313,2333~2334,2355~23
    56,2444,2493,2542,2544,2778~27
    80,3890
    12186 8idt:5
    (2.8Å)

    120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS000002B0D5 RF00001 Homo
    sapiens

    9606
    37491604
    931

    1290

    s51

    879
    Assembly1
    rna:2:1~5069 77~80,84,88,98,100~102
    12187 8idt:8
    (2.8Å)

    156 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00004B2C76 RF00002 Homo
    sapiens

    9606
    37491604
    1227

    592

    s24

    993

    1215

    1352

    s37

    1238

    1178

    M085_0.6

    1389

    1360

    589

    375

    M106_0.6
    Assembly1
    rna:2:1~5069 3~22,24~37,40,53~54,103,110~11
    3,115,124,126~128,138~139,141~
    149,151~156
    12188 8idy:2
    (3.0Å)

    3641 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS000268145C RF02543 Homo
    sapiens

    9606
    37491604
    M054_0.6

    1306

    769

    1302

    1303

    762

    763

    1148

    1149

    764

    167

    21

    1079

    930

    1029

    1075

    1072

    1073

    M104_0.6

    1071

    819

    1373

    938

    546

    s52

    s50

    931

    813

    936

    s59

    995

    994

    595

    1314

    991

    1312

    1311

    1028

    1150

    123

    124

    125

    1068

    M273_0.6

    1017

    1060

    s100

    s102

    52

    533

    M227_0.6

    1384

    375

    926

    822

    1128

    988

    1321

    708

    705

    1328

    707

    1124

    987

    703

    M077_0.6

    1237

    83

    1181

    797

    796

    795

    836

    837

    791

    790

    838

    1334

    s70

    1016

    s72

    1393

    610

    1012

    1013

    1236

    M290_0.6

    1231

    1232

    1233

    1335

    s17

    M109_0.6

    1336

    1331

    1333

    589

    s96

    s99

    872

    1389

    902

    821

    900

    901

    906

    33

    924

    970

    M102_0.6

    M044_0.6

    1245

    s62

    s61

    1227

    883

    M035_0.6

    1223

    M156_0.6

    604

    M320_0.6

    1347

    60

    s81

    M349_0.6

    1083

    175

    100

    977

    976

    974

    853

    M154_0.6

    884

    s55

    979

    M153_0.6

    183

    1238

    185

    1375

    815

    1036

    503

    1034

    1035

    1212

    1043

    1211

    1216

    1042

    986

    1354

    M103_0.6

    169

    91

    1127

    M070_0.6

    1026

    M020_0.6

    M050_0.6

    1187

    1182

    1183

    1037

    1107

    M347_0.6

    722

    935

    M086_0.6

    1164

    1165

    1166

    606

    886

    156

    748

    749

    608

    727

    s77

    M061_0.6

    s48

    1055

    878

    879

    1059

    953

    952

    42

    954

    870

    M272_0.6

    1352

    774

    1215

    776

    1173

    770

    773

    958

    1271

    1272

    1273

    779

    778

    1178

    M151_0.6

    78

    1285

    M083_0.6

    1041

    1040

    1045

    1044

    706

    688

    1360

    684

    800

    1368

    804
    Assembly1
    rna:5:1~120 1736~1739,1792,1794~1795,1909,
    1936,1941~1942

    rna:8:1~156 2~22,58,146,339,342~348,350~35
    3,356~357,360,362,379~380,415~
    430,1304~1305,1333~1334,1371,2
    308~2309,2333~2334,2355,2444,2
    488,2493,2542,2544,2778~2780
    12189 8idy:5
    (3.0Å)

    120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS000002B0D5 RF00001 Homo
    sapiens

    9606
    37491604
    931

    1290

    s51

    879
    Assembly1
    rna:2:1~5069 77~79,84,88,98,100~102
    12190 8idy:8
    (3.0Å)

    156 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00004B2C76 RF00002 Homo
    sapiens

    9606
    37491604
    1227

    592

    s24

    993

    1215

    1352

    s37

    1238

    1178

    M085_0.6

    1389

    1360

    589

    375

    M106_0.6
    Assembly1
    rna:2:1~5069 4~22,24~37,40~41,53,103,110~11
    3,124,126~128,138~149,151~156
    12191 8ie3:2
    (3.3Å)

    3519 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS000268145C RF02543 Homo
    sapiens

    9606
    37491604
    M054_0.6

    1306

    769

    706

    1303

    762

    872

    1148

    1149

    764

    167

    21

    1079

    930

    1029

    1075

    1072

    1073

    s77

    1071

    819

    1373

    938

    546

    s52

    s50

    931

    813

    936

    s59

    995

    994

    595

    1314

    991

    1312

    1311

    1028

    1150

    123

    124

    125

    1068

    s72

    1060

    s100

    s102

    52

    533

    M227_0.6

    1384

    375

    926

    822

    1128

    988

    1321

    708

    705

    1328

    707

    1124

    987

    703

    M077_0.6

    1237

    83

    1181

    797

    796

    795

    836

    837

    791

    790

    838

    1334

    s70

    1016

    1017

    1393

    610

    1012

    1013

    1236

    M290_0.6

    763

    1231

    1232

    1233

    1335

    s17

    M109_0.6

    1336

    1331

    1239

    1333

    589

    776

    s96

    s99

    M273_0.6

    1389

    902

    821

    900

    901

    906

    33

    924

    970

    M044_0.6

    1245

    s62

    s61

    1227

    883

    M035_0.6

    1223

    M156_0.6

    604

    M320_0.6

    1347

    60

    s81

    M349_0.6

    1083

    175

    1026

    100

    977

    976

    974

    853

    M154_0.6

    884

    s55

    979

    M153_0.6

    183

    1238

    185

    1375

    815

    1036

    503

    1034

    1035

    1212

    M102_0.6

    1216

    1042

    986

    M148_0.6

    1354

    M103_0.6

    169

    91

    1127

    M070_0.6

    M272_0.6

    M020_0.6

    M050_0.6

    1187

    1182

    1183

    1037

    727

    M347_0.6

    722

    935

    M086_0.6

    1164

    1165

    1166

    606

    886

    156

    748

    749

    608

    M061_0.6

    s48

    1055

    878

    879

    1059

    953

    952

    42

    954

    870

    1107

    1352

    774

    1215

    M104_0.6

    1173

    770

    773

    958

    1271

    1272

    1273

    779

    778

    1178

    M151_0.6

    78

    1285

    M083_0.6

    1041

    1040

    1043

    1045

    1044

    1360

    684

    800

    1368
    Assembly1
    rna:5:1~120 1736~1738,1792,1794~1795,1909,
    1936,1941~1942

    rna:8:1~156 2~22,58,339,342~348,350~353,35
    6~357,360,362,379~380,415~430,
    1305,1333~1334,1371,2308~2309,
    2333,2355,2444,2493,2508,2542,
    2544,2778~2779,4162
    12192 8ie3:5
    (3.3Å)

    120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS000002B0D5 RF00001 Homo
    sapiens

    9606
    37491604
    931

    1290

    s51

    879
    Assembly1
    rna:2:1~5069 77~79,84,88,100~101
    12193 8ie3:8
    (3.3Å)

    156 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00004B2C76 RF00002 Homo
    sapiens

    9606
    37491604
    1227

    592

    s24

    993

    1215

    1352

    s37

    1238

    1178

    M085_0.6

    1389

    1360

    589

    375

    M106_0.6
    Assembly1
    rna:2:1~5069 4~22,24~37,40,53~54,103,108,11
    0,112~113,124,126~128,135~136,
    138~156
    12194 8ifb:5
    (2.43Å)

    76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS00005AA258 RF00005 Escherichia
    coli

    562
    38227611 Assembly1
    rna:A:2~1534 34~37
    rna:a:1~2903 19,37~38,52~53,56,63,74~76
    rna:7:1~10 34~37
    12195 8ifb:6
    (2.43Å)

    77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS00001BBAFC RF00005 Escherichia
    coli

    562
    38227611 Assembly1
    rna:A:2~1534 31~33,35,39,41~42
    rna:a:1~2903 11~13,25~26,75~77
    rna:7:1~10 35~38
    12196 8ifb:7
    (2.43Å)

    10 N/A N/A N/A Escherichia
    coli

    562
    38227611 Assembly1
    rna:A:2~1534 1,4~8,10
    rna:5:1~76 7~10
    rna:6:1~77 4~6
    12197 8ifb:A
    (2.43Å)

    1519 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00000ABFE9 RF00177 Escherichia
    coli

    562
    38227611 Assembly1
    rna:a:1~2903 702,784,899,1407~1409,1418,142
    9,1473~1475,1483~1484,1494~149
    6,1517

    rna:5:1~76 530~531,1054,1493
    rna:6:1~77 790,966,1229~1230,1338~1340,14
    00

    rna:7:1~10 693,926,1397,1400~1402,1492~14
    93,1498
    12198 8ifb:a
    (2.43Å)

    2753 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00004B0F34 RF02541 Escherichia
    coli

    562
    38227611 Assembly1
    rna:A:2~1534 1689,1700~1704,1832,1837,1846,
    1848,1912~1916,1919~1920,1947~
    1948,1959~1961

    rna:b:1~119 861~863,915,917~919,958,2339
    rna:5:1~76 896~897,1913,2469~2470,2482,25
    06~2507,2553~2555,2583~2584

    rna:6:1~77 1907~1909,1922~1924,2251~2253,
    2450~2451,2602
    12199 8ifb:b
    (2.43Å)

    119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS0000049E57 RF00001 Escherichia
    coli

    562
    38227611 Assembly1
    rna:a:1~2903 41,78~81,89~90,96~97,99~100
    12200 8ifc:5
    (2.9Å)

    76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS00005AA258 RF00005 Escherichia
    coli

    562
    38227611 Assembly1
    rna:A:2~1534 34~37
    rna:a:1~2903 19,37~38,52~53,56,63,74~76
    rna:7:1~10 34~37
    << < 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 > >>
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    Reference:
  • Chengxin Zhang, Lydia Freddolino (2024) "FURNA: a database for function annotations of RNA structures," PLOS Biology 22(7): e3002476.