SEQ2FUN

FURNA
Download all results in tab-seperated text for 16611 RNAs.
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    # PDB
    (Resolution)
    Length EC number
    & GO term
    RNAcentral Rfam Taxon PubMed ATtRACT
    motif
    Ligand &
    binding nucleotides
    12401 8oo0:4
    (3.1Å)

    156 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS000029C274 RF00002 Thermochaetoides
    thermophila
    DSM
    1495

    759272
    38267453 Assembly1
    rna:1:3~3337 1,3~5,7~13,15~22,24~33,35~37,4
    0,53~54,104,114~115,126,140~15
    6
    12402 8ooy:P
    (4.0Å)

    18 N/A N/A N/A synthetic
    construct

    32630
    37620586 Assembly1
    rna:T:11~36 1~18
    12403 8ooy:T
    (4.0Å)

    26 N/A N/A N/A synthetic
    construct

    32630
    37620586 Assembly1
    rna:P:1~18 19~36
    12404 8ova:AA
    (2.47Å)

    1919 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS0002915680 RF01960 Trypanosoma
    brucei
    brucei

    5702
    37985661 Assembly1
    rna:BA:7~1869 730,1249
    rna:BB:2~1536 414,1190,1271,1528,2139~2141,2
    150~2151,2161,2225~2226,2234~2
    237,2259
    12405 8ova:AB
    (2.47Å)

    19 N/A URS00029156E6 N/A Trypanosoma
    brucei
    brucei

    5702
    37985661 Assembly1
    rna:BB:2~1536 71,75~76
    12406 8ova:BA
    (2.47Å)

    1604 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00029156E1 RF02543 Trypanosoma
    brucei
    brucei

    5702
    37985661 Assembly1
    rna:AA:29~2279 966~967
    rna:BB:2~1536 43,45,73,96,351,371,373~376,37
    8~380,490~494,733~734,741~747,
    749~750,813~815,887,890,895~89
    7,926~928,938~939,950~951,980~
    981,985,989,991,993~994,996,99
    8~999,1001~1002,1004~1007,1010
    ~1011,1016,1028,1033~1036,1038
    ,1041,1044,1057~1059,1076~1080
    ,1082,1087,1118~1120,1172~1173
    ,1180,1183,1250,1259,1262~1270
    ,1284~1286,1341~1344,1441~1447
    ,1449,1607,1614~1625,1628,1664
    ~1683,1694,1696,1702,1709~1713
    ,1715~1717,1733,1739,1744,1749
    ,1818,1843,1846,1858~1862,1865
    ~1869

    rna:BG:1~183 241~249,485,487,491,1327,1347,
    1585,1625~1626

    rna:BF:3~78 530~531,709
    rna:BE:2~216 945,958~959,975~976,1721~1722,
    1828~1829,1834~1836,1838,1855,
    1866

    rna:BD:1~119 1121~1122,1126,1177,1179~1180,
    1290,1335,1342

    rna:BC:1~171 7~25,61,130,146,302~303,399,40
    1~407,409~412,415~416,419,421,
    438,440,469,475~479,481~489,75
    3~754,793,1564~1565,1569,1590,
    1822~1823,1860~1861
    12407 8ova:BB
    (2.47Å)

    1119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00029156D6 RF02543 Trypanosoma
    brucei
    brucei

    5702
    37985661 Assembly1
    rna:BA:7~1869 2~6,8~26,29,31~34,37~42,47,49~
    50,54~60,62~63,73,75,91~92,396
    ~399,402~403,406,410~411,430~4
    32,434,439,486~487,588,610~611
    ,617~627,630~639,641~644,648~6
    50,661,666,672,674~679,786~787
    ,1057,1061,1075~1077,1079~1081
    ,1084~1086,1088~1089,1162~1164
    ,1171~1172,1184,1207,1228~1230
    ,1232~1239,1241~1242,1253~1257
    ,1263,1265~1269,1271,1279~1280
    ,1282,1286,1288~1289,1309,1311
    ,1314,1317~1319,1321~1323,1325
    ,1338~1341,1392~1393,1404,1411
    ~1412,1432~1434,1437,1453~1454

    rna:AA:29~2279 102,119,455,459,470,519~523,52
    6~527,554~556,566~567

    rna:BH:4~135 68~69,124~127,373~375,613,653~
    654,1445~1446,1525

    rna:BG:1~183 44~45,53,78~80,378~381,605~606
    ,608,649,1345~1346,1354~1355,1
    362~1364,1366,1387,1449~1451,1
    453,1461

    rna:BF:3~78 1457~1459,1466,1468
    rna:BE:2~216 4~5,132~133,989~990
    rna:BC:1~171 15,650,803~804,1027,1448
    rna:AB:1~76 474~475,500,1207~1208,1247~124
    8
    12408 8ova:BC
    (2.47Å)

    160 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00029156A2 RF00002 Trypanosoma
    brucei
    brucei

    5702
    37985661 Assembly1
    rna:BA:7~1869 4~12,14~21,23~32,34~37,40~41,1
    03,108~109,139~140,150~157,159
    ~164,166~170

    rna:BB:2~1536 1~2,112,165,167,169~171
    rna:BG:1~183 9~10
    12409 8ova:BD
    (2.47Å)

    119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS000020E902 RF00001 Trypanosoma
    brucei
    brucei

    5702
    37985661 Assembly1
    rna:BA:7~1869 77~79,84,88,98,100~103
    12410 8ova:BE
    (2.47Å)

    188 N/A URS00029156E9 N/A Trypanosoma
    brucei
    brucei

    5702
    37985661 Assembly1
    rna:BA:7~1869 16,30~31,70~71,120~122,164,201
    ~204

    rna:BB:2~1536 15~16,23,44,181,211~212
    rna:BG:1~183 55,57~60
    12411 8ova:BF
    (2.47Å)

    69 N/A URS000029EC47 N/A Trypanosoma
    brucei
    brucei

    5702
    37985661 Assembly1
    rna:BA:7~1869 70~71
    rna:BB:2~1536 4~8,13,78
    12412 8ova:BG
    (2.47Å)

    183 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00000EFF4F RF02543 Trypanosoma
    brucei
    brucei

    5702
    37985661 Assembly1
    rna:BA:7~1869 7~16,20,105~106,133,143,170
    rna:BB:2~1536 41~43,52~54,57~58,81~82,84,90,
    92,94,107~111,117~118,121,133~
    134,157~158,170,172,174

    rna:BH:4~135 24,87~88,112~113
    rna:BE:2~216 97~99
    12413 8ova:BH
    (2.47Å)

    119 N/A URS00005A0173 N/A Trypanosoma
    brucei
    brucei

    5702
    37985661 Assembly1
    rna:BA:7~1869 9,128~129
    rna:BB:2~1536 17,19~20,74~76,91~93,107,113
    rna:BG:1~183 39~40,102,135
    12414 8ove:AA
    (2.6Å)

    1836 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00029156E8 RF01960 Trypanosoma
    brucei
    brucei

    5702
    37985661 Assembly1
    rna:BA:7~1867 730~731,1248~1249
    rna:BB:4~1536 414,1190,1528,2139~2142,2150~2
    151,2161,2225~2226,2234~2237,2
    259
    12415 8ove:AB
    (2.6Å)

    19 N/A URS00029156E6 N/A Trypanosoma
    brucei
    brucei

    5702
    37985661 Assembly1
    rna:BB:4~1536 71,75~76
    12416 8ove:BA
    (2.6Å)

    1579 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00029156E1 RF02543 Trypanosoma
    brucei
    brucei

    5702
    37985661 Assembly1
    rna:AA:29~2279 966~967
    rna:BB:4~1536 42~43,45,73,96,351,358,371,373
    ~380,490~494,733~734,741~747,7
    49~750,813~815,883,895~897,925
    ~928,938~939,950~951,980~981,9
    85,989,991,993~996,998~999,100
    1~1002,1004~1007,1010~1011,101
    6,1033~1038,1041,1044,1057~105
    9,1075~1080,1082,1087,1118~112
    0,1172~1173,1180,1183,1250,125
    8~1259,1262~1270,1284~1286,132
    9,1341~1343,1441~1447,1449~145
    0,1607,1614~1625,1628,1664~168
    3,1694,1696,1702,1709~1713,171
    5~1717,1732~1733,1737,1739,174
    1,1744,1818,1843,1846,1859~186
    7

    rna:BC:1~169 7~25,61,130,146,302~303,399~40
    7,409~412,415~416,419,421,438,
    440,469,475~479,481~489,753~75
    4,793,1564~1565,1569,1590,1612
    ,1730,1822~1823,1860~1861

    rna:BD:1~119 1121~1122,1126,1177,1179~1180,
    1290,1305,1335,1342

    rna:BE:4~215 945~946,958~959,975~976,978,17
    21~1722,1828~1829,1834~1836,18
    55

    rna:BF:3~78 530~531,709
    rna:BG:1~183 241~249,485,487,491,1585,1625~
    1626
    12417 8ove:BB
    (2.6Å)

    1109 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00029156B3 RF02543 Trypanosoma
    brucei
    brucei

    5702
    37985661 Assembly1
    rna:AA:29~2279 101~102,119~120,455,470,472,51
    9~523,526~527,554~556,566~567

    rna:AB:1~76 474~475,500,1207~1208,1247~124
    8

    rna:BA:7~1867 4~26,31~34,37~42,47,49~50,54~6
    0,62~63,73~75,91,396~399,401~4
    03,406,410~411,430~432,434,439
    ,486~487,588,610~611,617~627,6
    30~639,641~645,648,650,660~661
    ,666,672,674~676,678~679,684,7
    86~787,1042,1057,1061,1075~107
    6,1078~1081,1084~1086,1089,116
    2~1164,1171~1172,1207,1228~123
    0,1232~1239,1241~1242,1253~125
    7,1263,1265~1269,1271,1279~128
    0,1282,1286,1288,1309~1311,131
    4,1317~1319,1321~1323,1325,133
    8~1341,1392~1393,1404,1411~141
    2,1432~1434,1437,1453~1454

    rna:BC:1~169 9,15,650~651,803,1027,1448~144
    9

    rna:BE:4~215 42~43,988~989
    rna:BF:3~78 1456~1459,1466
    rna:BG:1~183 44~45,53,78~80,378~381,605~606
    ,608,649,1345~1346,1354~1355,1
    364,1366,1387,1449~1451,1453,1
    461

    rna:BH:4~133 68~69,124~126,373~375,613,653~
    654,1445~1446,1525
    12418 8ove:BC
    (2.6Å)

    160 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00029156A2 RF00002 Trypanosoma
    brucei
    brucei

    5702
    37985661 Assembly1
    rna:BA:7~1867 4~12,14~21,23~37,40~41,53,103,
    105,108~109,139~140,149~157,15
    9~164,166~169

    rna:BB:4~1536 1~2,112,125,165,167,169
    rna:BG:1~183 9~10
    12419 8ove:BD
    (2.6Å)

    119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS000020E902 RF00001 Trypanosoma
    brucei
    brucei

    5702
    37985661 Assembly1
    rna:BA:7~1867 77~79,84,88,98,100~103
    12420 8ove:BE
    (2.6Å)

    166 N/A URS00029156E9 N/A Trypanosoma
    brucei
    brucei

    5702
    37985661 Assembly1
    rna:BA:7~1867 30~31,33,70~71,120~122,194,201
    ~204

    rna:BB:4~1536 23,44
    rna:BG:1~183 57~60
    12421 8ove:BF
    (2.6Å)

    69 N/A URS000029EC47 N/A Trypanosoma
    brucei
    brucei

    5702
    37985661 Assembly1
    rna:BA:7~1867 70~71
    rna:BB:4~1536 4~7,13,78
    12422 8ove:BG
    (2.6Å)

    183 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00000EFF4F RF02543 Trypanosoma
    brucei
    brucei

    5702
    37985661 Assembly1
    rna:BA:7~1867 7~16,20,105~106,133,170
    rna:BB:4~1536 41~43,52~54,58,81~82,84,90,92,
    94,107~111,117~118,121,134,157
    ~159,170,172~174

    rna:BE:4~215 97~99
    rna:BF:3~78 1,23
    rna:BH:4~133 85,88,112~113
    12423 8ove:BH
    (2.6Å)

    118 N/A URS00005A0173 N/A Trypanosoma
    brucei
    brucei

    5702
    37985661 Assembly1
    rna:BA:7~1867 9,128~129
    rna:BB:4~1536 17,19~20,74~75,91~93,107,113
    rna:BG:1~183 39~40,102,106
    12424 8ovj:1
    (2.4Å)

    1611 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00029156EB RF02543 Leishmania
    major
    strain
    Friedlin

    347515
    38722744 Assembly1
    rna:3:6~214 876,889~890,906~908,1638~1639,
    1740~1742,1746~1749,1767~1768

    rna:4:1~183 222~230,457,461,477,1504,1544~
    1545

    rna:6:3~73 491~492,644
    rna:7:1~169 2~21,57,126,142,273~275,369~37
    7,379~382,385~386,389,391,408,
    410,445~459,688~689,729,1483~1
    484,1488,1509,1531,1635,1734~1
    735,1772~1773

    rna:8:5~123 1047~1048,1052,1103,1105~1106,
    1228,1258,1264

    rna:S1:1~2204 897~898
    rna:2:3~1600 39,41,69,321,328,341,343~346,3
    48~350,460~464,668~669,676~682
    ,684~685,747~749,762,818,826~8
    28,856~859,869~870,881~882,911
    ~912,916,920,922,924~925,927,9
    29~930,932~933,935~938,941~942
    ,947,959,964~967,969,972,975,9
    88~990,1007~1011,1013,1018,104
    4~1046,1098~1099,1106,1109,117
    3,1181~1182,1185~1193,1207~120
    9,1262~1265,1364~1370,1372,152
    6,1533~1544,1547,1581~1600,161
    1,1613,1619,1626~1630,1632~163
    5,1649~1650,1654,1656,1661,166
    7,1730,1755~1756,1758,1770~177
    4,1776~1780
    12425 8ovj:2
    (2.4Å)

    1105 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00029156F8 RF02543 Leishmania
    major
    strain
    Friedlin

    347515
    38722744 Assembly1
    rna:1:2~1780 3~6,8~26,31~34,37~42,47~50,54~
    60,62~63,73,75,91~92,378~382,3
    84~385,388,392~393,412~414,416
    ,421,468~469,570,592~593,599~6
    09,612~621,623~627,630~632,643
    ,648,654,656~660,768~769,1026,
    1045,1059~1060,1062~1065,1068~
    1070,1073,1146~1148,1155~1156,
    1208,1212~1214,1216~1223,1225~
    1226,1237~1241,1247,1249~1253,
    1255,1263~1264,1266,1270,1272,
    1293~1295,1301~1303,1305~1307,
    1309,1322~1323,1325,1376~1377,
    1388,1395~1396,1416~1418,1421,
    1437~1438

    rna:3:6~214 43,977~978
    rna:4:1~183 44~45,53,78~80,360~363,587~588
    ,590,631,1329~1332,1338~1339,1
    346~1348,1350,1371,1433~1435,1
    437,1445

    rna:5:2~134 68~69,124~127,355~357,595,635~
    636,1429~1430,1512

    rna:6:3~73 1441~1443,1450,1452
    rna:7:1~169 9~10,15,632,784,1011,1432
    rna:S1:1~2204 102,119,437,452~453,501~502,50
    4~505,508~509,536~538,548~549

    rna:S4:1~76 457,1191,1231~1232
    12426 8ovj:3
    (2.4Å)

    156 N/A URS00027E5AFF N/A Leishmania
    major
    strain
    Friedlin

    347515
    38722744 Assembly1
    rna:1:2~1780 32~33,38,72~74,122~124,153,202
    ~205

    rna:4:1~183 57,60~62
    rna:2:3~1600 25,46
    12427 8ovj:4
    (2.4Å)

    183 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00029156A6 RF02543 Leishmania
    major
    strain
    Friedlin

    347515
    38722744 Assembly1
    rna:1:2~1780 7~16,20,105~106,170
    rna:3:6~214 97~98
    rna:5:2~134 85,88,112~113,180
    rna:6:3~73 1,23
    rna:2:3~1600 41~43,52~54,58,81~82,89~90,92,
    94,107~111,117~118,121,133~135
    ,157~158,170,172,174
    12428 8ovj:5
    (2.4Å)

    115 N/A URS00029156FD N/A Leishmania
    major
    strain
    Friedlin

    347515
    38722744 Assembly1
    rna:1:2~1780 9,128~129
    rna:4:1~183 3~4,39~40,102,106
    rna:2:3~1600 17,19~20,66~67,91~93,107,113
    12429 8ovj:6
    (2.4Å)

    71 N/A URS00005EBAC0 N/A Leishmania
    major
    strain
    Friedlin

    347515
    38722744 Assembly1
    rna:1:2~1780 65~66
    rna:4:1~183 3~4
    rna:2:3~1600 5~9,13~14
    12430 8ovj:7
    (2.4Å)

    164 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS0000A76380 RF00002 Leishmania
    major
    strain
    Friedlin

    347515
    38722744 Assembly1
    rna:1:2~1780 4~21,23~37,40,53~54,94,103,108
    ~109,111,126,139~140,150~163,1
    65~169

    rna:4:1~183 9~10
    rna:2:3~1600 1~2,112,125,164,166,168
    12431 8ovj:8
    (2.4Å)

    119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00000FEF50 RF00001 Leishmania
    major
    strain
    Friedlin

    347515
    38722744 Assembly1
    rna:1:2~1780 81~83,88,92,102,104~107
    12432 8ovj:S1
    (2.4Å)

    1755 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS000291573B RF01960 Leishmania
    major
    strain
    Friedlin

    347515
    38722744 Assembly1
    rna:1:2~1780 677~678,1218~1219
    rna:2:3~1600 364,1160,1475,2064~2066,2075~2
    076,2086,2149~2150,2158~2161,2
    183
    12433 8ovj:S4
    (2.4Å)

    20 N/A URS00029156C6 N/A Leishmania
    major
    strain
    Friedlin

    347515
    38722744 Assembly1
    rna:2:3~1600 71,76
    12434 8oz0:W
    (3.5Å)

    1716 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00029156DC RF01960 Homo
    sapiens

    9606
    38287194
    1303

    1263

    872

    1149

    1267

    764

    43

    692

    1079

    1075

    1072

    1073

    819

    346

    546

    1378

    930

    936

    935

    M296_0.6

    1314

    M141_0.6

    1068

    s72

    M147_0.6

    1060

    s102

    1384

    1386

    M016_0.6

    821

    926

    822

    1128

    1323

    988

    595

    1327

    706

    707

    986

    796

    836

    762

    790

    838

    1124

    1017

    1392

    1390

    1236

    1335

    1334

    M109_0.6

    1238

    M273_0.6

    s14

    s96

    s99

    1311

    902

    900

    s48

    1333

    924

    s62

    s61

    M074_0.6

    335

    60

    1167

    977

    976

    974

    970

    1037

    1035

    1213

    756

    639

    M148_0.6

    786

    1355

    M065_0.6

    93

    167

    M070_0.6

    813

    M050_0.6

    1188

    1187

    1029

    815

    727

    722

    883

    604

    606

    884

    749

    779

    608

    M037_0.6

    1055

    878

    1059

    952

    1195

    954

    870

    1380

    325

    770

    610

    1274

    1042

    M127_0.6

    s24

    804
    Assembly1
    rna:y:1~75 1058,1248,1524,1639~1641,1701
    rna:z:79~128 961,1207,1698,1701~1702,1830
    12435 8oz0:y
    (3.5Å)

    75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS0000326EAC RF00005 Homo
    sapiens

    9606
    38287194
    M352_0.6

    1235

    s46

    1075
    Assembly1
    rna:W:1~1869 29~31,33,37,39~40
    rna:z:79~128 33~36
    12436 8oz0:z
    (3.5Å)

    50 N/A N/A N/A Homo
    sapiens

    9606
    38287194
    M176_0.6

    414

    416

    327

    M346_0.6
    Assembly1
    rna:W:1~1869 103,105~108,111~112
    rna:y:1~75 106~108
    12437 8p03:1
    (3.04Å)

    75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS0000326EAC RF00005 Oryctolagus
    cuniculus

    9986
    38244546 Assembly1
    rna:2:1~1863 30~32,34,38~41
    rna:3:47~55 34~37
    12438 8p03:2
    (3.04Å)

    1743 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS0001A16A63 RF01960 Oryctolagus
    cuniculus

    9986
    38244546 Assembly1
    rna:1:2~76 1054,1244,1634~1636
    rna:3:47~55 957,1053,1203,1696~1697,1824
    12439 8p09:1
    (3.3Å)

    75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS0000326EAC RF00005 Oryctolagus
    cuniculus

    9986
    38244546 Assembly1
    rna:2:1~1863 30~32,34,38,40~41
    rna:3:47~55 34~37
    12440 8p09:2
    (3.3Å)

    1741 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS0001A16A63 RF01960 Oryctolagus
    cuniculus

    9986
    38244546 Assembly1
    rna:1:2~76 1054,1244,1519,1634~1636,1696
    rna:3:47~55 957,1053,1203,1696~1697,1824
    12441 8p0g:V
    (3.17Å)

    14 N/A URS000291574D N/A Thogotovirus
    thogotoense

    11569
    N/A Assembly1
    rna:R:20~24 11~14
    12442 8p16:1
    (2.77Å)

    2899 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00004B0F34 RF02541 Escherichia
    coli

    562
    N/A Assembly1
    rna:2:1~1542 1700~1703,1832,1836~1837,1846,
    1848,1912~1913,1915~1916,1919~
    1920,1947~1949,1959~1961

    rna:5:2~76 1907~1909,1922~1924,2251~2253,
    2255,2450~2451,2602

    rna:3:1~119 861~863,915,917~919,958,2339
    12443 8p16:2
    (2.77Å)

    1536 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00000ABFE9 RF00177 Escherichia
    coli

    562
    N/A Assembly1
    rna:4:24~49 530,693,926,1397,1400~1401,149
    2~1493,1498,1534~1542

    rna:5:2~76 790,966,1229~1230,1338~1340,14
    00

    rna:1:1~2903 702,783~784,899,1407~1409,1418
    ,1429,1473~1475,1483~1484,1493
    ~1496,1517
    12444 8p16:3
    (2.77Å)

    119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS0000049E57 RF00001 Escherichia
    coli

    562
    N/A Assembly1
    rna:1:1~2903 41,78~81,89,97,99~100
    12445 8p16:4
    (2.77Å)

    26 N/A N/A N/A Escherichia
    coli

    562
    N/A Assembly1
    rna:2:1~1542 24~33,35,37~45
    rna:5:2~76 38~40
    12446 8p16:5
    (2.77Å)

    76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS00002905B5 RF00005 Escherichia
    coli

    562
    N/A Assembly1
    rna:2:1~1542 30~32,34,38~41
    rna:4:24~49 34~37
    rna:1:1~2903 2~3,11~13,24~25,74~76
    12447 8p17:1
    (2.78Å)

    2899 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00004B0F34 RF02541 Escherichia
    coli

    562
    N/A Assembly1
    rna:2:1~1542 1700~1703,1832,1837,1846,1848,
    1895,1912~1913,1915~1916,1919~
    1920,1947~1949,1959~1961

    rna:5:2~76 1907~1909,1922~1924,2251~2253,
    2255,2450~2451,2602

    rna:3:1~119 861~863,915,917~919,2339
    12448 8p17:2
    (2.78Å)

    1536 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00000ABFE9 RF00177 Escherichia
    coli

    562
    N/A Assembly1
    rna:4:24~49 530,693,926,1397,1400~1402,149
    2~1493,1498,1534~1542

    rna:5:2~76 790,966,1229~1230,1338~1340,14
    00

    rna:1:1~2903 702,784,899,1407~1409,1418,142
    9,1473~1475,1483~1484,1493~149
    6,1517
    12449 8p17:3
    (2.78Å)

    119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS0000049E57 RF00001 Escherichia
    coli

    562
    N/A Assembly1
    rna:1:1~2903 41,78~81,96~97,99~100
    12450 8p17:4
    (2.78Å)

    26 N/A N/A N/A Escherichia
    coli

    562
    N/A Assembly1
    rna:2:1~1542 24~33,35,37~45
    rna:5:2~76 38~40
    12451 8p17:5
    (2.78Å)

    76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS00002905B5 RF00005 Escherichia
    coli

    562
    N/A Assembly1
    rna:2:1~1542 30~32,34,38~41
    rna:4:24~49 34~37
    rna:1:1~2903 2~3,11~13,24~25,74~76
    12452 8p18:1
    (2.77Å)

    2899 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00004B0F34 RF02541 Escherichia
    coli

    562
    N/A Assembly1
    rna:2:1~1542 1700~1703,1832,1837,1846,1848,
    1912~1913,1915~1916,1919~1920,
    1947~1949,1959~1961

    rna:5:2~76 1907~1909,1922~1924,2251~2253,
    2255,2450~2451,2602

    rna:3:1~119 861~863,915,917~919,958,2339
    12453 8p18:2
    (2.77Å)

    1536 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00000ABFE9 RF00177 Escherichia
    coli

    562
    N/A Assembly1
    rna:4:24~49 530,693,926,1397,1400~1402,149
    2~1493,1498,1534~1542

    rna:5:2~76 790,966,1229~1230,1338~1340,14
    00

    rna:1:1~2903 702,784,899,1407~1409,1418,142
    9,1473~1475,1483~1484,1493~149
    6,1517
    12454 8p18:3
    (2.77Å)

    119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS0000049E57 RF00001 Escherichia
    coli

    562
    N/A Assembly1
    rna:1:1~2903 41,78~81,89,96~97,99~100
    12455 8p18:4
    (2.77Å)

    26 N/A N/A N/A Escherichia
    coli

    562
    N/A Assembly1
    rna:2:1~1542 24~33,35,37~45
    rna:5:2~76 38~40
    12456 8p18:5
    (2.77Å)

    76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS00002905B5 RF00005 Escherichia
    coli

    562
    N/A Assembly1
    rna:2:1~1542 30~32,34,38~41
    rna:4:24~49 34~37
    rna:1:1~2903 2~3,11~13,24~25,74~76
    12457 8p2f:A
    (2.44Å)

    2844 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00001C3329 RF02541 Staphylococcus
    aureus
    subsp.
    aureus
    NCTC
    8325

    93061
    38902339 Assembly1
    rna:B:2~114 906~908,960~964,994,1002,2367
    rna:D:1~76 1877~1878,1919~1920,2207,2421~
    2422,2448~2449,2459

    rna:F:2~76 1934~1936,1949~1951,2278~2280,
    2282,2477~2478,2629

    rna:a:5~1544 1733,1745~1748,1859,1864,1873,
    1875,1939~1943,1946~1947,1974~
    1977,1986~1988
    12458 8p2f:B
    (2.44Å)

    113 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS0000062A7E RF00001 Staphylococcus
    aureus
    subsp.
    aureus
    NCTC
    8325

    93061
    38902339 Assembly1
    rna:A:3~2920 39,76~79,85,87,93~94,96~97
    12459 8p2f:D
    (2.44Å)

    77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS000041AF00 RF00005 Escherichia
    coli

    562
    38902339 Assembly1
    rna:A:3~2920 3~4,17A,70~72,75~76
    rna:a:5~1544 34,37~38
    rna:b:12~19 34~37
    12460 8p2f:F
    (2.44Å)

    76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS000041AF00 RF00005 Escherichia
    coli

    562
    38902339 Assembly1
    rna:A:3~2920 11~13,24~25,74~76
    rna:a:5~1544 31~32,34,40~41
    rna:b:12~19 34~37
    12461 8p2f:a
    (2.44Å)

    1526 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS0000070030 RF00177 Staphylococcus
    aureus
    subsp.
    aureus
    NCTC
    8325

    93061
    38902339 Assembly1
    rna:A:3~2920 710,792,908,1417~1419,1428,143
    0,1439,1484~1486,1494~1495,150
    3~1507,1528

    rna:D:1~76 701~702,1392~1393
    rna:F:2~76 975,1348~1350,1410
    rna:b:12~19 701,935,1410~1412,1504,1509
    12462 8p2g:A
    (2.02Å)

    2844 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00001C3329 RF02541 Staphylococcus
    aureus
    subsp.
    aureus
    NCTC
    8325

    93061
    38902339 Assembly1
    rna:B:2~114 906~908,960,962~964,1002,2367
    rna:D:1~76 1877~1879,1918~1920,2421~2422,
    2448~2449,2459

    rna:a:5~1552 1733,1744~1748,1859,1864,1874~
    1875,1939~1940,1943,1946~1947,
    1974~1975,1977,1986~1988
    12463 8p2g:B
    (2.02Å)

    113 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS0000062A7E RF00001 Staphylococcus
    aureus
    subsp.
    aureus
    NCTC
    8325

    93061
    38902339 Assembly1
    rna:A:3~2920 39,76~79,85,87,93~94,96~97
    12464 8p2g:D
    (2.02Å)

    77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS000041AF00 RF00005 Escherichia
    coli

    562
    38902339 Assembly1
    rna:A:3~2920 3~4,70~72,75~76
    rna:a:5~1552 29~32,34,40~41
    rna:b:4~19 34~37
    12465 8p2g:a
    (2.02Å)

    1534 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS0000070030 RF00177 Staphylococcus
    aureus
    subsp.
    aureus
    NCTC
    8325

    93061
    38902339 Assembly1
    rna:A:3~2920 710,792,908,1417~1419,1428,143
    0,1439,1484~1486,1494~1495,150
    3~1507,1528

    rna:D:1~76 975,1239~1240,1348~1350
    rna:b:4~19 701,731,1544~1552
    12466 8p2g:b
    (2.02Å)

    16 N/A N/A N/A Escherichia
    coli

    562
    38902339 Assembly1
    rna:D:1~76 16~19
    rna:a:5~1552 4~10,12~13,15~16
    12467 8p2h:A
    (2.49Å)

    2844 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00001C3329 RF02541 Staphylococcus
    aureus
    subsp.
    aureus
    NCTC
    8325

    93061
    38902339 Assembly1
    rna:B:2~114 906~908,960~964,1002,2367
    rna:D:1~76 1877~1879,1919~1920,2421~2422,
    2448~2449,2459

    rna:a:5~1552 1733,1744~1748,1859,1874~1875,
    1939~1940,1942~1943,1946~1947,
    1974~1975,1986~1988
    12468 8p2h:B
    (2.49Å)

    113 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS0000062A7E RF00001 Staphylococcus
    aureus
    subsp.
    aureus
    NCTC
    8325

    93061
    38902339 Assembly1
    rna:A:3~2920 39,76~79,85,87,93~94,96~97
    12469 8p2h:D
    (2.49Å)

    77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS000041AF00 RF00005 Escherichia
    coli

    562
    38902339 Assembly1
    rna:A:3~2920 3~4,70~72,75~76
    rna:a:5~1552 29~32,34,37,40~41
    rna:b:4~19 34~37
    12470 8p2h:a
    (2.49Å)

    1534 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS0000070030 RF00177 Staphylococcus
    aureus
    subsp.
    aureus
    NCTC
    8325

    93061
    38902339 Assembly1
    rna:A:3~2920 710,908,1417~1419,1428,1439~14
    40,1484~1486,1494~1495,1503~15
    07,1528

    rna:D:1~76 797,975,1239,1348~1351
    rna:b:4~19 701,731,1544~1552
    12471 8p2h:b
    (2.49Å)

    16 N/A N/A N/A Escherichia
    coli

    562
    38902339 Assembly1
    rna:D:1~76 16~18
    rna:a:5~1552 4~13,15~16,19
    12472 8p2k:A2
    (2.9Å)

    1770 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00023119C9 RF01960 Oryctolagus
    cuniculus

    9986
    37347872 Assembly1
    rna:B5:1~4808 678~679,971,1029~1030,1052~105
    3,1181,1709~1711,1720~1722,173
    2,1816~1817,1825~1829,1850

    rna:AT:1~76 1059,1249,1525~1526,1640~1642,
    1702
    12473 8p2k:AT
    (2.9Å)

    76 GO:0030533 (F) triplet codon-amino aci... URS0000868532 RF00005 Oryctolagus
    cuniculus

    9986
    37347872 Assembly1
    rna:B5:1~4808 12,24~25,74~76
    rna:A2:1~1870 30~32,34,38~41
    12474 8p2k:B5
    (2.9Å)

    3764 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS000231197F RF02543 Oryctolagus
    cuniculus

    9986
    37347872 Assembly1
    rna:B7:2~120 1675~1677,1680,1731,1733~1735,
    1833,1848,1875,1881

    rna:B8:1~156 1~22,58,146,193~194,339,341~34
    8,350~353,356~357,360,362,379~
    380,415~430,1248~1249,1277~127
    8,1315,2151~2152,2156,2176~217
    7,2198,2287,2315,2329~2330,233
    6,2351~2352,2385~2389,2621~262
    3,3622

    rna:A2:1~1870 1518~1519,2727~2728,3361,3427,
    3431~3432,3444,3491~3492,3494~
    3495,3498~3499,3526~3528,3538~
    3539,3566

    rna:AI:74~76 4087~4088,4116~4117
    rna:AT:1~76 3487,3501~3502,3642,3942~3944,
    3946,4142~4143,4294
    12475 8p2k:B7
    (2.9Å)

    119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS000002B0D5 RF00001 Oryctolagus
    cuniculus

    9986
    37347872 Assembly1
    rna:B5:1~4808 77~80,84,88,98,100~101,103
    12476 8p2k:B8
    (2.9Å)

    156 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00023119A4 RF00002 Oryctolagus
    cuniculus

    9986
    37347872 Assembly1
    rna:B5:1~4808 3~22,24~37,40~41,53~54,68~69,1
    03,108,110~113,123~128,138~149
    ,151~156
    12477 8p4v:1
    (3.16Å)

    3149 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS000061F377 RF02543 Saccharomyces
    cerevisiae

    4932
    40119759
    M107_0.6

    M080_0.6

    M299_0.6

    16
    Assembly1
    rna:3:1~121 996~998,1052,1054~1056,1156,11
    71,1197,1203

    rna:4:1~158 3~23,59,143,330~337,339~342,34
    5~346,349,351,368~369,404~419,
    656~657,691,1394~1395,1398~139
    9,1418~1420,1441,1530,1585,161
    8~1619,1830~1832,2386~2387,258
    5,2994~2995

    rna:A:1~1798 846~848,1935~1936,2125~2126,22
    55~2256,2258~2259,2262~2263,22
    90~2293,2302~2304
    12478 8p4v:3
    (3.16Å)

    121 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS000055688D RF00001 Saccharomyces
    cerevisiae

    4932
    40119759 Assembly1
    rna:1:3~3396 79~82,86,90,100,102~104
    12479 8p4v:4
    (3.16Å)

    158 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00001BF64E RF00002 Saccharomyces
    cerevisiae

    4932
    40119759
    441
    Assembly1
    rna:1:3~3396 1~22,24~33,35~37,40,53~54,104,
    106,109~110,112~115,126,129,13
    6~157
    12480 8p4v:A
    (3.16Å)

    1781 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00005F2C2D RF01960 Saccharomyces
    cerevisiae

    4932
    40119759
    101

    441

    M080_0.6

    386

    M107_0.6

    497

    490
    Assembly1
    rna:1:3~3396 628~629,971~973,1644~1646,1655
    ~1657,1667~1668,1746~1747,1757
    ~1759,1780
    12481 8p4v:AR
    (3.16Å)

    3147 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS000061F377 RF02543 Saccharomyces
    cerevisiae

    4932
    40119759
    M107_0.6

    M080_0.6

    M299_0.6

    16
    Assembly2
    rna:AS:1~121 996~999,1052~1056,1156,1171,11
    97,1203

    rna:AT:1~158 3~23,59,143,330~337,339~342,34
    5~346,349,351,368~369,404~419,
    656~657,691,1394~1395,1398~139
    9,1418~1420,1441,1530,1558,158
    5,1618~1619,1830~1832,2386,258
    5,2994~2995

    rna:sR:1~1800 846~848,1935~1936,2125,2205,22
    55~2256,2258~2260,2262~2263,22
    90~2292,2302~2304
    12482 8p4v:AS
    (3.16Å)

    121 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS000055688D RF00001 Saccharomyces
    cerevisiae

    4932
    40119759 Assembly2
    rna:AR:3~3396 79~82,86,90,100,102~104
    12483 8p4v:AT
    (3.16Å)

    158 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00001BF64E RF00002 Saccharomyces
    cerevisiae

    4932
    40119759
    441
    Assembly2
    rna:AR:3~3396 1~22,24~33,35~37,40~41,53~54,1
    04,109~110,112~115,126,129,136
    ~152,154~157
    12484 8p4v:sR
    (3.16Å)

    1783 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00005F2C2D RF01960 Saccharomyces
    cerevisiae

    4932
    40119759
    101

    441

    M080_0.6

    386

    M107_0.6

    497

    490
    Assembly2
    rna:AR:3~3396 628~629,913,971~973,1644~1646,
    1655~1657,1667~1668,1746~1748,
    1757~1759,1780
    12485 8p5d:L50
    (10.8Å)

    2499 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00026177A1 RF02543 Spraguea
    lophii
    42_110

    1358809
    37709902 Assembly1
    rna:L70:1~119 744~747,783,785~786,855,870,89
    6

    rna:S60:1~1357 598,1691,1693~1696,1698~1699,1
    726~1728,1738~1740
    12486 8p5d:L70
    (10.8Å)

    119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00026177A4 RF00001 Spraguea
    lophii
    42_110

    1358809
    37709902 Assembly1
    rna:L50:1~2613 77~79,84,88,98,100~102
    12487 8p5d:S60
    (10.8Å)

    1354 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS000261779A RF02542 Spraguea
    lophii
    42_110

    1358809
    37709902 Assembly1
    rna:L50:1~2613 675,1247~1250,1258~1259,1306~1
    308,1317~1319
    12488 8p60:K50
    (14.3Å)

    2499 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00026177A1 RF02543 Spraguea
    lophii
    42_110

    1358809
    37709902 Assembly1
    rna:K70:1~119 744~747,783,785~786,855,870,89
    6

    rna:R60:1~1357 598,1691,1693~1696,1698~1699,1
    726~1728,1738~1740
    12489 8p60:K70
    (14.3Å)

    119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00026177A4 RF00001 Spraguea
    lophii
    42_110

    1358809
    37709902 Assembly1
    rna:K50:1~2613 77~79,84,88,98,100~102
    12490 8p60:L50
    (14.3Å)

    2499 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00026177A1 RF02543 Spraguea
    lophii
    42_110

    1358809
    37709902 Assembly1
    rna:L70:1~119 744~747,783,785~786,855,870,89
    6

    rna:S60:1~1357 598,1691,1693~1696,1698~1699,1
    726~1728,1738~1740
    12491 8p60:L70
    (14.3Å)

    119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00026177A4 RF00001 Spraguea
    lophii
    42_110

    1358809
    37709902 Assembly1
    rna:L50:1~2613 77~79,84,88,98,100~102
    12492 8p60:R60
    (14.3Å)

    1354 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS000261779A RF02542 Spraguea
    lophii
    42_110

    1358809
    37709902 Assembly1
    rna:K50:1~2613 675,1247~1250,1258~1259,1306~1
    308,1317~1319
    12493 8p60:S60
    (14.3Å)

    1354 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS000261779A RF02542 Spraguea
    lophii
    42_110

    1358809
    37709902 Assembly1
    rna:L50:1~2613 675,1247~1250,1258~1259,1306~1
    308,1317~1319
    12494 8p6p:3
    (3.2Å)

    24 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS0000AB9B3C RF02541 Mycoplasmoides
    pneumoniae
    M129

    272634
    39668257 Assembly1
    rna:5:5~1511 1919~1920,1922~1923,1926~1927
    rna:7:9~46 1914~1915,1930
    12495 8p6p:5
    (3.2Å)

    1507 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS0002F1044E RF00177 Mycoplasmoides
    pneumoniae
    M129

    272634
    39668257 Assembly1
    rna:3:1913~1936 1382~1384,1469~1471,1492
    rna:7:9~46 787,961,1204~1205,1312~1314,13
    75

    rna:8:9~46 528,1045,1468
    rna:Y:35~55 690,921,1171,1375~1376,1467~14
    68,1473
    12496 8p6p:7
    (3.2Å)

    30 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS0002F1043E RF00005 Mycoplasmoides
    pneumoniae
    M129

    272634
    39668257 Assembly1
    rna:5:5~1511 30~32,34,38,40~41
    rna:Y:35~55 34~37
    12497 8p6p:8
    (3.2Å)

    30 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS0000068008 RF00005 Mycoplasmoides
    pneumoniae
    M129

    272634
    39668257 Assembly1
    rna:5:5~1511 34~37
    rna:Y:35~55 34~37
    12498 8p6p:Y
    (3.2Å)

    21 N/A N/A N/A Mycoplasmoides
    pneumoniae
    M129

    272634
    39668257 Assembly1
    rna:5:5~1511 36~37,39~44,47
    rna:7:9~46 40~42
    rna:8:9~46 43~45
    12499 8p7x:3
    (3.03Å)

    2893 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS0000AB9B3C RF02541 Mycoplasmoides
    pneumoniae
    M129

    272634
    39668257 Assembly1
    rna:4:1~108 897~899,954~955
    rna:5:5~1511 1737,1853~1854,1919~1920,1922~
    1923,1926~1927,1954~1956,1966~
    1967

    rna:6:1~76 1858~1859,2177,2402~2403,2429~
    2430,2440

    rna:7:1~75 1915~1916,1930,2259~2261,2458~
    2459

    rna:8:1~76 933~934,1920,1951,2477~2478,24
    90,2563~2565,2592~2593,2610
    12500 8p7x:4
    (3.03Å)

    108 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS000000E851 RF00001 Mycoplasmoides
    pneumoniae
    M129

    272634
    39668257 Assembly1
    rna:3:8~2900 76~78,89~90
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    Reference:
  • Chengxin Zhang, Lydia Freddolino (2024) "FURNA: a database for function annotations of RNA structures," PLOS Biology 22(7): e3002476.