SEQ2FUN

FURNA
Download all results in tab-seperated text for 16611 RNAs.
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  • Hover over Ligand to view the name of the ligand and the ligand-binding nucleotides on the RNA.

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    # PDB
    (Resolution)    		 Length EC number
    & GO term     		RNAcentral Rfam Taxon PubMed ATtRACT
    motif     		Ligand &
    binding nucleotides
    12601 8pnf:A
    (2.9Å)
    		 14 N/A URS0002F10450 N/A rhinovirus
    B14
    12131    		 39537894 Assembly1
    rna:A-22:1~14 2~4,12~14
    12602 8pnn:1
    (2.9Å)
    		 3149 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02543 Saccharomyces
    cerevisiae
    4932    		 40119759
    M107_0.6

    M080_0.6

    M299_0.6

    16    		 Assembly1
    rna:3:1~121 996~998,1052~1056,1156,1171,11
    97,1203
    rna:4:1~158 3~23,59,143,330~337,339~342,34
    5~346,349,351,368~369,404~419,
    656~657,691,1394~1395,1398~139
    9,1418~1420,1441,1530,1585,161
    8~1619,1830~1831,2386~2387,258
    5,2994~2995
    rna:A:1~1798 846~848,1935~1936,2125~2126,21
    95,2255~2256,2258~2259,2262~22
    63,2290~2293,2302~2304
    12603 8pnn:3
    (2.9Å)
    		 121 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00001 Saccharomyces
    cerevisiae
    4932    		 40119759 Assembly1
    rna:1:3~3396 79~82,86,90,100,102~103
    12604 8pnn:4
    (2.9Å)
    		 158 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00002 Saccharomyces
    cerevisiae
    4932    		 40119759
    441    		 Assembly1
    rna:1:3~3396 1~22,24~33,35~37,40,53~54,104,
    109~110,112,114~115,126,129,13
    6~157
    12605 8pnn:A
    (2.9Å)
    		 1722 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF01960 Saccharomyces
    cerevisiae
    4932    		 40119759
    101

    M080_0.6

    386

    M107_0.6

    497

    490    		 Assembly1
    rna:1:3~3396 628~629,913,971~973,994,1644~1
    646,1655~1657,1667,1746~1747,1
    757~1759,1780
    12606 8pnn:AR
    (2.9Å)
    		 3136 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02543 Saccharomyces
    cerevisiae
    4932    		 40119759
    M107_0.6

    M080_0.6

    M299_0.6

    16    		 Assembly2
    rna:AS:1~121 996~999,1052,1054~1056,1156,11
    71,1197,1203
    rna:sR:1~1800 846~848,1935~1936,2125,2205,22
    55~2256,2258~2259,2262~2263,22
    90~2292,2302~2304
    rna:AT:1~158 3~23,59,143,330~337,339~342,34
    5~346,349,351,368~369,404~419,
    656~657,691,1394~1395,1398~139
    9,1418~1420,1441,1530,1584~158
    5,1618~1619,1830~1832,2386,258
    5,2994~2995
    12607 8pnn:AS
    (2.9Å)
    		 121 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00001 Saccharomyces
    cerevisiae
    4932    		 40119759 Assembly2
    rna:AR:3~3396 79~82,86,90,100,102~104
    12608 8pnn:AT
    (2.9Å)
    		 158 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00002 Saccharomyces
    cerevisiae
    4932    		 40119759
    441    		 Assembly2
    rna:AR:3~3396 1~22,24~33,35~37,40~41,53~54,1
    04,109~110,113~115,126,129,136
    ~155,157
    12609 8pnn:sR
    (2.9Å)
    		 1783 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF01960 Saccharomyces
    cerevisiae
    4932    		 40119759
    101

    441

    M080_0.6

    386

    M107_0.6

    497

    490    		 Assembly2
    rna:AR:3~3396 628~629,911,913,971~973,1644~1
    646,1655~1657,1667~1668,1746~1
    747,1757~1759,1780
    12610 8pnq:V
    (2.88Å)
    		 36 N/A URS0002915740 N/A Influenza
    A
    virus
    (A/Zhejiang/DTID-ZJU01/2013(H7N9))
    1318616    		 38316757 Assembly1
    rna:M:10~18 19~27
    12611 8poh:U
    (3.3Å)
    		 14 N/A URS0002915740 N/A Influenza
    A
    virus
    (A/Zhejiang/DTID-ZJU01/2013(H7N9))
    1318616    		 38316757 Assembly1
    rna:S:6~10 12~14
    12612 8poh:V
    (3.3Å)
    		 14 N/A URS0002915740 N/A Influenza
    A
    virus
    (A/Zhejiang/DTID-ZJU01/2013(H7N9))
    1318616    		 38316757 Assembly1
    rna:R:6~10 11~14
    12613 8ppl:A2
    (2.65Å)
    		 1780 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00027E5AFD RF01960 Homo
    sapiens
    9606    		 37802027
    1263

    872

    1149

    1267

    764

    954

    692

    1079

    1072

    1073

    819

    346

    546

    1378

    930

    936

    935

    M296_0.6

    1314

    M141_0.6

    1068

    s72

    M147_0.6

    1060

    s102

    1384

    1386

    M016_0.6

    821

    926

    822

    1128

    1323

    988

    595

    1327

    706

    1124

    796

    836

    762

    790

    838

    1017

    1393

    1392

    1390

    1236

    1335

    1334

    M109_0.6

    1238

    1333

    s14

    s96

    s99

    M273_0.6

    902

    900

    s48

    924

    s62

    s61

    M074_0.6

    335

    1167

    977

    976

    974

    970

    1037

    1035

    1213

    756

    M026_0.6

    986

    M148_0.6

    786

    1355

    M065_0.6

    93

    167

    M070_0.6

    813

    M050_0.6

    1188

    1187

    1029

    815

    727

    722

    883

    604

    606

    884

    749

    779

    608

    M037_0.6

    1311

    878

    1059

    952

    1195

    43

    870

    1380

    325

    770

    610

    1274

    1055

    1042

    M127_0.6

    639

    804    		 Assembly1
    rna:Iw:1~75 1248,1524~1525,1639~1641
    12614 8ppl:Iw
    (2.65Å)
    		 75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS0000326EAC RF00005 Homo
    sapiens
    9606    		 37802027
    1075    		 Assembly1
    rna:A2:1~1869 28~31,33,39~40
    12615 8psn:S
    (2.73Å)
    		 15 N/A URS000291569A N/A Tilapia
    lake
    virus
    1549864    		 38066000 Assembly1
    rna:V:3~15 1~5,9~10
    rna:E:1 14~15
    12616 8psn:V
    (2.73Å)
    		 13 N/A URS000291569A N/A Tilapia
    lake
    virus
    1549864    		 38066000 Assembly1
    rna:S:1~15 10~15
    12617 8pso:S
    (2.4Å)
    		 15 N/A URS000291569A N/A Tilapia
    lake
    virus
    1549864    		 38066000 Assembly1
    rna:V:3~15 1~5,9~10
    rna:F:1 14~15
    12618 8pso:V
    (2.4Å)
    		 13 N/A URS000291569A N/A Tilapia
    lake
    virus
    1549864    		 38066000 Assembly1
    rna:S:1~15 10~15
    12619 8psq:S
    (2.65Å)
    		 15 N/A URS000291567A N/A Tilapia
    lake
    virus
    1549864    		 38066000 Assembly1
    rna:V:3~15 1~6,8~9
    12620 8psq:V
    (2.65Å)
    		 13 N/A URS000291567A N/A Tilapia
    lake
    virus
    1549864    		 38066000 Assembly1
    rna:S:1~15 10~15
    12621 8pss:S
    (2.83Å)
    		 15 N/A URS000291567A N/A Tilapia
    lake
    virus
    1549864    		 38066000 Assembly1
    rna:V:3~16 1~6,8~9
    12622 8pss:V
    (2.83Å)
    		 14 N/A URS000291567A N/A Tilapia
    lake
    virus
    1549864    		 38066000 Assembly1
    rna:S:1~15 10~16
    12623 8psu:S
    (3.18Å)
    		 15 N/A URS000291569A N/A Tilapia
    lake
    virus
    1549864    		 38066000 Assembly1
    rna:V:3~16 1~5,9
    12624 8psu:V
    (3.18Å)
    		 14 N/A URS000291569A N/A Tilapia
    lake
    virus
    1549864    		 38066000 Assembly1
    rna:S:1~15 11~16
    12625 8psx:P
    (2.96Å)
    		 13 N/A URS0002915695 N/A Tilapia
    lake
    virus
    1549864    		 38066000 Assembly1
    rna:S:28~40 13~21
    12626 8psx:S
    (2.96Å)
    		 13 N/A URS000291569A N/A Tilapia
    lake
    virus
    1549864    		 38066000 Assembly1
    rna:P:4~21 31~40
    12627 8psz:D
    (2.42Å)
    		 14 N/A URS000291569A N/A Tilapia
    lake
    virus
    1549864    		 38066000 Assembly1
    rna:V:3~15 3~7,10
    12628 8psz:P
    (2.42Å)
    		 13 N/A URS0002915695 N/A Tilapia
    lake
    virus
    1549864    		 38066000 Assembly1
    rna:S:28~40 13~21
    12629 8psz:S
    (2.42Å)
    		 13 N/A URS000291569A N/A Tilapia
    lake
    virus
    1549864    		 38066000 Assembly1
    rna:P:4~21 31~40
    12630 8psz:V
    (2.42Å)
    		 13 N/A URS000291569A N/A Tilapia
    lake
    virus
    1549864    		 38066000 Assembly1
    rna:D:3~17 11~15
    12631 8pt2:D
    (2.59Å)
    		 14 N/A URS000291569A N/A Tilapia
    lake
    virus
    1549864    		 38066000 Assembly1
    rna:V:3~15 3~7,10
    12632 8pt2:V
    (2.59Å)
    		 13 N/A URS000291569A N/A Tilapia
    lake
    virus
    1549864    		 38066000 Assembly1
    rna:D:3~17 11~15
    12633 8pt6:S
    (3.03Å)
    		 15 N/A URS000291569A N/A Tilapia
    lake
    virus
    1549864    		 38066000 Assembly1
    rna:V:3~15 1~5,9~10
    12634 8pt6:V
    (3.03Å)
    		 13 N/A URS000291569A N/A Tilapia
    lake
    virus
    1549864    		 38066000 Assembly1
    rna:S:1~15 10~15
    12635 8pt7:S
    (2.8Å)
    		 15 N/A URS000291567A N/A Tilapia
    lake
    virus
    1549864    		 38066000 Assembly1
    rna:V:3~16 1~6,8~9
    12636 8pt7:V
    (2.8Å)
    		 14 N/A URS000291567A N/A Tilapia
    lake
    virus
    1549864    		 38066000 Assembly1
    rna:S:1~15 10~16
    12637 8pth:D
    (2.73Å)
    		 14 N/A URS000291569A N/A Tilapia
    lake
    virus
    1549864    		 38066000 Assembly1
    rna:V:3~15 26~30,33
    12638 8pth:V
    (2.73Å)
    		 13 N/A URS000291569A N/A Tilapia
    lake
    virus
    1549864    		 38066000 Assembly1
    rna:D:26~40 11~15
    12639 8pv1:C1
    (2.56Å)
    		 3078 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00029156E5 RF02543 Thermochaetoides
    thermophila
    DSM
    1495
    759272    		 37921038 Assembly1
    rna:C2:1~156 4~24,60,139,323~330,332~335,33
    8~339,342,344,361~362,397~412,
    644~645,679,1377~1378,1382,140
    1~1403,1424,1513,1541,1565,159
    9~1600,1810~1812,2349~2350,295
    3~2954
    12640 8pv1:C2
    (2.56Å)
    		 156 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000029C274 RF00002 Thermochaetoides
    thermophila
    DSM
    1495
    759272    		 37921038 Assembly1
    rna:C1:1~3338 1,3~22,24~33,35~37,40~41,53~54
    ,104,109,112~115,128,136~150,1
    52~156
    12641 8pv2:C1
    (2.63Å)
    		 3056 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00029156B2 RF02543 Thermochaetoides
    thermophila
    DSM
    1495
    759272    		 37921038 Assembly1
    rna:C2:1~156 4~24,60,139,323~330,332~335,33
    8~339,342,344,361~362,397~412,
    644~645,679,1377~1378,1382,140
    1~1403,1424,1513,1541,1564~156
    5,1599~1600,1810~1812,2349~235
    0,2544,2953~2954
    12642 8pv2:C2
    (2.63Å)
    		 153 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000029C274 RF00002 Thermochaetoides
    thermophila
    DSM
    1495
    759272    		 37921038 Assembly1
    rna:C1:4~3338 1~22,24~33,35~37,40~41,53~54,1
    04,109,112~115,128,136~156
    12643 8pv3:C1
    (2.8Å)
    		 2998 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00029156E5 RF02543 Thermochaetoides
    thermophila
    DSM
    1495
    759272    		 37921038 Assembly1
    rna:C2:1~156 4~24,60,139,323~330,332~335,33
    8~339,342,344,361~362,397~412,
    644~645,679,1377~1378,1382,140
    1~1403,1424,1513,1541,1564~156
    5,1599,1810~1812,2349~2350,295
    3~2954
    12644 8pv3:C2
    (2.8Å)
    		 156 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000029C274 RF00002 Thermochaetoides
    thermophila
    DSM
    1495
    759272    		 37921038 Assembly1
    rna:C1:1~3338 1,3~22,24~33,35~37,40~41,53~54
    ,104,109,112~115,128,136~150,1
    52~156
    12645 8pv4:C1
    (2.9Å)
    		 3136 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00029156E5 RF02543 Thermochaetoides
    thermophila
    DSM
    1495
    759272    		 37921038 Assembly1
    rna:C2:1~156 4~24,60,139,323~330,332~335,33
    8~339,342,344,361~362,397~412,
    644~645,679,1377~1378,1382,140
    1~1403,1424,1513,1541,1564~156
    5,1599~1600,1810~1812,2349~235
    0,2953~2954
    12646 8pv4:C2
    (2.9Å)
    		 156 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000029C274 RF00002 Thermochaetoides
    thermophila
    DSM
    1495
    759272    		 37921038 Assembly1
    rna:C1:1~3338 1~22,24~33,35~37,40~41,52~54,1
    04,109,112~115,128,136~150,152
    ~156
    12647 8pv5:C1
    (2.86Å)
    		 3060 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00029156E5 RF02543 Thermochaetoides
    thermophila
    DSM
    1495
    759272    		 37921038 Assembly1
    rna:C2:1~156 4~24,60,139,323~330,332~336,33
    8~339,342,344,361~362,397~412,
    644~645,679,1377~1378,1381~138
    2,1401~1403,1424,1513,1541,156
    4~1565,1598~1599,1810~1812,234
    9~2350,2544,2953~2954
    12648 8pv5:C2
    (2.86Å)
    		 152 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000029C274 RF00002 Thermochaetoides
    thermophila
    DSM
    1495
    759272    		 37921038 Assembly1
    rna:C1:4~3338 1,3~22,24~33,35~37,40~41,53~54
    ,104,109,112~115,126,129,136~1
    56
    12649 8pv6:C1
    (2.94Å)
    		 3100 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00029156E5 RF02543 Thermochaetoides
    thermophila
    DSM
    1495
    759272    		 37921038 Assembly1
    rna:C2:1~156 4~24,60,139,323~330,332~335,33
    8~339,342,344,361~362,397~412,
    644~645,679,1377~1378,1381~138
    2,1401~1403,1424,1513,1541,156
    4~1565,1599~1600,1810~1812,234
    9~2350,2953~2954
    rna:C4:1~119 1154,1181,2803
    12650 8pv6:C2
    (2.94Å)
    		 156 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000029C274 RF00002 Thermochaetoides
    thermophila
    DSM
    1495
    759272    		 37921038 Assembly1
    rna:C1:1~3338 1~22,24~33,35~37,40~41,53~54,1
    04,109,112~115,128,136~150,152
    ~156
    12651 8pv6:C4
    (2.94Å)
    		 115 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0002617727 RF00001 Thermochaetoides
    thermophila
    DSM
    1495
    759272    		 37921038 Assembly1
    rna:C1:1~3338 85,88,104
    12652 8pv7:C1
    (2.12Å)
    		 3078 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00029156E5 RF02543 Thermochaetoides
    thermophila
    DSM
    1495
    759272    		 37921038 Assembly1
    rna:C2:1~156 4~24,60,139,323~330,332~335,33
    8~339,342,344,361~362,397~412,
    644~645,679,1377~1378,1382,140
    1~1403,1424,1513,1541,1564~156
    5,1599,1810~1812,2349~2350,295
    3~2954
    12653 8pv7:C2
    (2.12Å)
    		 156 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000029C274 RF00002 Thermochaetoides
    thermophila
    DSM
    1495
    759272    		 37921038 Assembly1
    rna:C1:1~3338 1~22,24~33,35~37,40,53~54,104,
    109,112~115,128,136~150,152~15
    6
    12654 8pv8:C1
    (2.91Å)
    		 3085 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00029156E5 RF02543 Thermochaetoides
    thermophila
    DSM
    1495
    759272    		 37921038 Assembly1
    rna:C2:1~156 4~24,60,139,323~330,332~335,33
    8~339,342,344,361~362,397~412,
    644~645,679,1377~1378,1381~138
    2,1401~1403,1424,1513,1541,156
    4~1565,1598~1600,1810~1812,234
    9~2350,2544,2953~2954
    rna:C4:1~119 1154,1181,2803
    12655 8pv8:C2
    (2.91Å)
    		 150 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000029C274 RF00002 Thermochaetoides
    thermophila
    DSM
    1495
    759272    		 37921038 Assembly1
    rna:C1:4~3338 1,3~22,24~33,35~37,40~41,53~54
    ,104,109~110,112~115,125~126,1
    29,136~156
    12656 8pv8:C4
    (2.91Å)
    		 115 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0002617727 RF00001 Thermochaetoides
    thermophila
    DSM
    1495
    759272    		 37921038 Assembly1
    rna:C1:4~3338 85,88,104
    12657 8pva:A
    (4.5Å)
    		 1519 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00000ABFE9 RF00177 Escherichia
    coli
    562    		 38011573 Assembly1
    rna:a:1~2903 702,784,899,1407~1409,1418,142
    9,1473~1475,1483~1484,1494~149
    6,1517
    rna:X:13~24 693,926,1196,1397,1400~1402,14
    92~1493,1498
    rna:Y:1~76 530~531,1054,1493
    rna:Z:2~76 790,966,1229~1230,1338~1340,14
    00
    12658 8pva:X
    (4.5Å)
    		 12 N/A N/A N/A Escherichia
    coli
    562    		 38011573 Assembly1
    rna:A:2~1534 13,15~20,23~24
    rna:Y:1~76 19~21
    rna:Z:2~76 16~18
    12659 8pva:Y
    (4.5Å)
    		 74 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000009F4BF RF00005 Escherichia
    coli
    562    		 38011573 Assembly1
    rna:A:2~1534 34~37
    rna:a:1~2903 19,37~38,53,56,63,74~76
    rna:X:13~24 34~37
    12660 8pva:Z
    (4.5Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00002905B5 RF00005 Escherichia
    coli
    562    		 38011573 Assembly1
    rna:A:2~1534 29~32,34,38~41
    rna:a:1~2903 11~13,24~25,74~76
    rna:X:13~24 34~37
    12661 8pva:a
    (4.5Å)
    		 2753 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B0F34 RF02541 Escherichia
    coli
    562    		 38011573 Assembly1
    rna:A:2~1534 1689,1700~1704,1832,1836~1837,
    1846,1848,1895,1912~1916,1919~
    1920,1947~1948,1959~1961
    rna:b:1~119 861~864,915,917~919,958,2339~2
    340
    rna:Y:1~76 896,1913,2469,2482~2483,2506~2
    507,2553~2555,2583~2585
    rna:Z:2~76 1907~1909,1922~1924,2251~2253,
    2450~2451,2602
    rna:5:75~76 2394~2395,2421~2422,2432
    12662 8pva:b
    (4.5Å)
    		 119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000049E57 RF00001 Escherichia
    coli
    562    		 38011573 Assembly1
    rna:a:1~2903 41,78~81,89~90,96~97,99~101
    12663 8pvk:C1
    (2.55Å)
    		 3138 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00029156E5 RF02543 Thermochaetoides
    thermophila
    DSM
    1495
    759272    		 37921038 Assembly1
    rna:C2:1~156 4~24,60,139,323~330,332~335,33
    8~339,342,344,361~362,397~412,
    644~645,679,1377~1378,1382,140
    1~1403,1424,1513,1541,1564~156
    5,1599,1810~1811,2349~2350,295
    3~2954
    rna:C4:1~119 2420~2421,2439~2440
    12664 8pvk:C2
    (2.55Å)
    		 156 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000029C274 RF00002 Thermochaetoides
    thermophila
    DSM
    1495
    759272    		 37921038 Assembly1
    rna:C1:1~3338 1,3~22,24~33,35~37,40,53~54,10
    4,109,112,114~115,128,136~150,
    152~156
    12665 8pvk:C4
    (2.55Å)
    		 119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0002617727 RF00001 Thermochaetoides
    thermophila
    DSM
    1495
    759272    		 37921038 Assembly1
    rna:C1:1~3338 83,89~91
    12666 8pvl:C1
    (2.19Å)
    		 3078 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00029156E5 RF02543 Thermochaetoides
    thermophila
    DSM
    1495
    759272    		 37921038 Assembly1
    rna:C2:1~156 4~24,60,139,323~330,332~335,33
    8~339,342,344,361~362,397~412,
    644~645,679,1377~1378,1381~138
    2,1401~1403,1424,1513,1541,156
    4~1565,1599~1600,1810~1812,234
    9~2350,2953~2954
    12667 8pvl:C2
    (2.19Å)
    		 156 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000029C274 RF00002 Thermochaetoides
    thermophila
    DSM
    1495
    759272    		 37921038 Assembly1
    rna:C1:1~3338 1~22,24~33,35~37,40~41,53~54,1
    04,109~110,112~115,128,136~150
    ,152~156
    12668 8q5i:1
    (2.45Å)
    		 3073 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000C2FD9C RF02543 Candida
    albicans
    5476    		 N/A Assembly1
    rna:3:1~121 992~995,1048,1050~1052,1152,11
    67,1193,1199
    rna:4:1~158 3~22,58,330~337,339~342,345~34
    6,349,351,368~369,404~419,654~
    655,689,1390~1391,1394,1415~14
    16,1437,1526,1557,1580,1614~16
    15,1826~1828,2364,2557,2966~29
    67
    rna:10:68~76 2189,2213~2214,2736~2737,2765~
    2766
    rna:A:1~1785 842~844,1931~1932,2103,2169,21
    74,2185~2186,2233~2235,2237,22
    40~2243,2268~2270,2280~2282
    rna:g:1~5 2188~2189
    12669 8q5i:3
    (2.45Å)
    		 121 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001B6144 RF00001 Candida
    albicans
    5476    		 N/A Assembly1
    rna:1:3~3361 79~82,86,90,100,102~104
    12670 8q5i:4
    (2.45Å)
    		 158 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000082EA4 RF00002 Candida
    albicans
    5476    		 N/A Assembly1
    rna:1:3~3361 1~22,24~33,35~37,40~41,53~54,1
    04,109,112~115,117,125~126,129
    ,136~155
    12671 8q5i:A
    (2.45Å)
    		 1558 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000059AE3B RF01960 Candida
    albicans
    5476    		 N/A Assembly1
    rna:1:3~3361 626,898,956~958,980,987~988,11
    08,1631~1633,1642~1644,1654~16
    55,1733~1734,1742,1744~1746,17
    67
    12672 8q7n:4
    (3.1Å)
    		 76 GO:0017070 (F) U6 snRNA binding
    GO:0000244 (P) spliceosomal tri-snRNP ...
    GO:0000353 (P) formation of quadruple ...
    GO:0005687 (C) U4 snRNP
    GO:0046540 (C) U4/U6 x U5 tri-snRNP co...    		 URS0000200C70 RF00015 Homo
    sapiens
    9606    		 38383864
    1368    		 Assembly1
    rna:6:1~78 1~12,14~17,21,55~61
    12673 8q7n:5
    (3.1Å)
    		 115 GO:0000244 (P) spliceosomal tri-snRNP ...
    GO:0000353 (P) formation of quadruple ...
    GO:0005682 (C) U5 snRNP
    GO:0046540 (C) U4/U6 x U5 tri-snRNP co...    		 URS000075BAAE RF00020 Homo
    sapiens
    9606    		 38383864
    1213

    M150_0.6

    1263

    1267

    42

    M158_0.6

    1355

    M025_0.6

    M075_0.6

    185

    s67

    1274

    1392

    1390    		 Assembly1
    rna:Z:49~79 40~44
    12674 8q7n:6
    (3.1Å)
    		 78 GO:0030621 (F) U4 snRNA binding
    GO:0000244 (P) spliceosomal tri-snRNP ...
    GO:0000353 (P) formation of quadruple ...
    GO:0005688 (C) U6 snRNP
    GO:0046540 (C) U4/U6 x U5 tri-snRNP co...    		 URS000035C796 RF00026 Homo
    sapiens
    9606    		 38383864
    1334

    1124

    s59

    M021_0.6    		 Assembly1
    rna:Z:49~79 29~44,46
    rna:4:1~81 51~75
    12675 8q7n:Z
    (3.1Å)
    		 31 N/A N/A N/A Homo
    sapiens
    9606    		 38383864 Assembly1
    rna:5:3~117 54~58
    rna:6:1~78 61~65,67~76
    12676 8q7z:A2
    (2.5Å)
    		 1676 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00029EB381 RF01960 Gallus
    gallus
    9031    		 38395592
    1371

    1337

    M244_0.6    		 Assembly1
    rna:B5:1~4440 329,638,928,986~987,1010,1138,
    1663~1665,1674~1676,1686~1687,
    1769~1770,1778~1782,1803
    rna:V:1~76 919~920,1177,1639
    12677 8q7z:B5
    (2.5Å)
    		 3562 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00029EB32C RF02543 Gallus
    gallus
    9031    		 38395592
    1371

    1337

    1185_17893325.pfm    		 Assembly1
    rna:B8:1~157 1~22,58,146~147,340,342~349,35
    1~354,356~358,361,363,380~381,
    416~431,1229~1230,1258~1259,12
    96,2057~2058,2061~2062,2081~20
    83,2104,2193,2221,2236,2257,22
    92~2293,2527~2529,3367,3606,40
    15
    rna:B7:1~119 1644~1647,1649,1700,1702~1704,
    1803,1818,1845,1851
    rna:A2:1~1823 1486~1487,2616,2633~2634,3106,
    3172,3176~3177,3188,3236~3240,
    3243~3244,3271~3273,3283~3285
    rna:V:1~76 3191~3192,3215~3217,3435,3494,
    3505~3506,3784~3785,3813~3814
    12678 8q7z:B7
    (2.5Å)
    		 119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000063C18D RF00001 Gallus
    gallus
    9031    		 38395592 Assembly1
    rna:B5:1~4440 77~80,84,88,98,100~104
    12679 8q7z:B8
    (2.5Å)
    		 157 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000A36EE5 RF00002 Gallus
    gallus
    9031    		 38395592 Assembly1
    rna:B5:1~4440 1,3~22,24~37,40~41,53~54,103,1
    08,110~113,115,124~127,136,138
    ~157
    12680 8q7z:V
    (2.5Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00029EB388 RF00005 Gallus
    gallus
    9031    		 38395592 Assembly1
    rna:B5:1~4440 3~4,17,19,56,70~71,75~76
    rna:A2:1~1823 34,37
    12681 8q87:A2
    (2.4Å)
    		 1697 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00029EB381 RF01960 Gallus
    gallus
    9031    		 38395592
    1371

    1337

    M244_0.6    		 Assembly1
    rna:B5:1~4440 638,928,986~988,1663~1666,1674
    ~1676,1769~1770,1780~1782,1803
    rna:V:1~76 1206,1479~1480,1594~1596
    12682 8q87:B5
    (2.4Å)
    		 3638 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00029EB32C RF02543 Gallus
    gallus
    9031    		 38395592
    1371

    1337

    1185_17893325.pfm    		 Assembly1
    rna:B8:1~157 1~22,58,146~147,340,342~349,35
    1~354,356~358,361,363,380~381,
    416~431,1229~1230,1258~1259,12
    96,2057~2058,2061~2062,2081~20
    83,2104,2193,2221,2237,2257~22
    58,2292~2293,2296,2527~2529,33
    67,3606,4015
    rna:B7:1~119 1644~1647,1649,1700,1702~1704,
    1803,1818,1845,1851
    rna:A2:1~1823 1486~1488,3106,3186~3187,3236~
    3238,3243~3244,3271~3273,3283~
    3285
    rna:V:1~76 3191~3192,3215~3217,3435,3494,
    3784~3785,3813~3814
    12683 8q87:B7
    (2.4Å)
    		 119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000063C18D RF00001 Gallus
    gallus
    9031    		 38395592 Assembly1
    rna:B5:1~4440 77~80,84,88,98,100~104
    12684 8q87:B8
    (2.4Å)
    		 157 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000A36EE5 RF00002 Gallus
    gallus
    9031    		 38395592 Assembly1
    rna:B5:1~4440 1,3~22,24~37,40,53~54,103,108,
    110~113,115,124~127,136,138~15
    7
    12685 8q87:V
    (2.4Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00029EB388 RF00005 Gallus
    gallus
    9031    		 38395592 Assembly1
    rna:B5:1~4440 3~4,19,56,70~71,75~76
    rna:A2:1~1823 30~32,34,40~41
    12686 8qbk:C
    (2.99Å)
    		 61 N/A URS0002915764 N/A Escherichia
    coli
    BL21(DE3)
    469008    		 38788717 Assembly1
    rna:D:1~14 2~14
    12687 8qbk:D
    (2.99Å)
    		 14 N/A URS0002616B7E N/A Escherichia
    coli
    BL21(DE3)
    469008    		 38788717 Assembly1
    rna:C:2~82 2~14
    12688 8qbk:M
    (2.99Å)
    		 61 N/A URS0002915764 N/A Escherichia
    coli
    BL21(DE3)
    469008    		 38788717 Assembly1
    rna:N:1~14 2~13
    12689 8qbk:N
    (2.99Å)
    		 14 N/A URS0002616B7E N/A Escherichia
    coli
    BL21(DE3)
    469008    		 38788717 Assembly1
    rna:M:2~82 4~14
    12690 8qbk:R
    (2.99Å)
    		 61 N/A URS0002915764 N/A Escherichia
    coli
    BL21(DE3)
    469008    		 38788717 Assembly1
    rna:S:1~14 2~14
    12691 8qbk:S
    (2.99Å)
    		 14 N/A URS0002616B7E N/A Escherichia
    coli
    BL21(DE3)
    469008    		 38788717 Assembly1
    rna:R:2~82 2~14
    12692 8qbk:W
    (2.99Å)
    		 61 N/A URS0002915764 N/A Escherichia
    coli
    BL21(DE3)
    469008    		 38788717 Assembly1
    rna:X:1~14 2~14
    12693 8qbk:X
    (2.99Å)
    		 14 N/A URS0002616B7E N/A Escherichia
    coli
    BL21(DE3)
    469008    		 38788717 Assembly1
    rna:W:2~82 2~14
    12694 8qbl:C
    (2.66Å)
    		 61 N/A URS0002915764 N/A Escherichia
    coli
    BL21(DE3)
    469008    		 38788717 Assembly1
    rna:D:1~14 2~14
    12695 8qbl:D
    (2.66Å)
    		 14 N/A URS0002616B7E N/A Escherichia
    coli
    BL21(DE3)
    469008    		 38788717 Assembly1
    rna:C:2~82 3~14
    12696 8qbl:M
    (2.66Å)
    		 58 N/A URS0002915764 N/A Escherichia
    coli
    BL21(DE3)
    469008    		 38788717 Assembly1
    rna:N:1~14 2~8,11~14
    12697 8qbl:N
    (2.66Å)
    		 14 N/A URS0002616B7E N/A Escherichia
    coli
    BL21(DE3)
    469008    		 38788717 Assembly1
    rna:M:2~79 3~5,8~14
    12698 8qbl:O
    (2.66Å)
    		 61 N/A URS0002915764 N/A Escherichia
    coli
    BL21(DE3)
    469008    		 38788717 Assembly1
    rna:Y:1~14 2~9,13
    12699 8qbl:R
    (2.66Å)
    		 61 N/A URS0002915764 N/A Escherichia
    coli
    BL21(DE3)
    469008    		 38788717 Assembly1
    rna:S:1~14 2~14
    12700 8qbl:S
    (2.66Å)
    		 14 N/A URS0002616B7E N/A Escherichia
    coli
    BL21(DE3)
    469008    		 38788717 Assembly1
    rna:R:2~82 3~14
    << < 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 > >>
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    Reference:
  • Chengxin Zhang, Lydia Freddolino (2024) "FURNA: a database for function annotations of RNA structures," PLOS Biology 22(7): e3002476.