SEQ2FUN

FURNA
Download all results in tab-seperated text for 14210 RNAs.
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  • Hover over Ligand to view the name of the ligand and the ligand-binding nucleotides on the RNA.

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    # PDB
    (Resolution)    		 Length EC number
    & GO term     		RNAcentral Rfam Taxon PubMed ATtRACT
    motif     		Ligand &
    binding nucleotides
    12801 8r0a:Z
    (5.8Å)
    		 15 N/A N/A N/A Homo
    sapiens
    9606    		 38778104 Assembly1
    rna:2:3~184 30,32~40,42~43
    12802 8r0a:z
    (5.8Å)
    		 11 N/A N/A N/A Homo
    sapiens
    9606    		 38778104 Assembly1
    rna:5:3~117 -3~-1
    rna:6:31~106 3~8
    12803 8r0b:2
    (4.4Å)
    		 98 GO:0045131 (F) pre-mRNA branch point b...
    GO:0000348 (P) mRNA branch site recogn...
    GO:0005686 (C) U2 snRNP    		 N/A RF00004 Homo
    sapiens
    9606    		 38778104
    504    		 Assembly1
    rna:6:31~106 3~14
    rna:Z:29~43 33~44
    12804 8r0b:4
    (4.4Å)
    		 128 GO:0017070 (F) U6 snRNA binding
    GO:0000244 (P) spliceosomal tri-snRNP ...
    GO:0000353 (P) formation of quadruple ...
    GO:0005687 (C) U4 snRNP
    GO:0046540 (C) U4/U6 x U5 tri-snRNP co...    		 N/A RF00015 Homo
    sapiens
    9606    		 38778104
    993

    1368

    583    		 Assembly1
    rna:6:31~106 1~18,55~62,64,75~79
    rna:z:-5~8 72~74
    12805 8r0b:5
    (4.4Å)
    		 112 GO:0000244 (P) spliceosomal tri-snRNP ...
    GO:0000353 (P) formation of quadruple ...
    GO:0005682 (C) U5 snRNP
    GO:0046540 (C) U4/U6 x U5 tri-snRNP co...    		 N/A RF00020 Homo
    sapiens
    9606    		 38778104
    1213

    M150_0.6

    1263

    42

    1267

    M158_0.6

    1355

    M025_0.6

    M075_0.6

    185

    s67

    1274

    1392

    1390    		 Assembly1
    rna:z:-5~8 40~44
    12806 8r0b:6
    (4.4Å)
    		 65 GO:0030621 (F) U4 snRNA binding
    GO:0000244 (P) spliceosomal tri-snRNP ...
    GO:0000353 (P) formation of quadruple ...
    GO:0005688 (C) U6 snRNP
    GO:0046540 (C) U4/U6 x U5 tri-snRNP co...    		 N/A RF00026 Homo
    sapiens
    9606    		 38778104
    1334

    s59

    M021_0.6    		 Assembly1
    rna:2:3~184 85~88,90~95
    rna:4:1~144 31,33~35,49,51~75
    rna:z:-5~8 39~41,43~44,46
    12807 8r0b:Z
    (4.4Å)
    		 15 N/A N/A N/A Homo
    sapiens
    9606    		 38778104 Assembly1
    rna:2:3~184 30,32~40,42~43
    12808 8r0b:z
    (4.4Å)
    		 13 N/A N/A N/A Homo
    sapiens
    9606    		 38778104 Assembly1
    rna:4:1~144 7~8
    rna:5:3~117 -5~-1
    rna:6:31~106 3~8
    12809 8r3k:M
    (3.43Å)
    		 10 N/A N/A N/A Influenza
    A
    virus
    (A/Zhejiang/DTID-ZJU01/2013(H7N9))
    1318616    		 38316757 Assembly1
    rna:V:1~31 14~23
    12810 8r3k:V
    (3.43Å)
    		 31 N/A N/A N/A Influenza
    A
    virus
    (A/Zhejiang/DTID-ZJU01/2013(H7N9))
    1318616    		 38316757 Assembly1
    rna:M:14~23 17~26
    12811 8r3l:R
    (3.25Å)
    		 15 N/A N/A N/A Influenza
    A
    virus
    (A/Zhejiang/DTID-ZJU01/2013(H7N9))
    1318616    		 38316757 Assembly1
    rna:V:1~16 4~9
    12812 8r3l:V
    (3.25Å)
    		 16 N/A N/A N/A Influenza
    A
    virus
    (A/Zhejiang/DTID-ZJU01/2013(H7N9))
    1318616    		 38316757 Assembly1
    rna:R:4~18 11~14,16
    12813 8r3v:71
    (3.28Å)
    		 30 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02541 Escherichia
    coli
    562    		 38409277 Assembly1
    rna:A1:1~1542 1912~1916,1919~1920
    rna:W1:8~48 1907~1909,1923
    12814 8r3v:72
    (3.28Å)
    		 2904 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02541 Escherichia
    coli
    562    		 38409277 Assembly1
    rna:82:1~120 861~863,916~919
    rna:A1:1~1542 2139~2141
    rna:A2:1~1537 1686,1689,1700~1704,1832,1836~
    1837,1846,1848,1912~1916,1919~
    1920,1947~1948,1959~1960
    rna:W:1~76 1909,2063~2064,2251~2253,2450~
    2451,2602
    rna:X2:1~77 1851~1852,2112,2394~2395,2421~
    2422,2432
    rna:Y2:1~76 896,1913,2469~2471,2482,2507,2
    553~2555,2583~2584,2602
    12815 8r3v:82
    (3.28Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00001 Escherichia
    coli
    562    		 38409277 Assembly1
    rna:72:1~2904 79~81,97,100
    12816 8r3v:A1
    (3.28Å)
    		 1542 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00177
    RF01959
    RF02542
    RF01960    		 Escherichia
    coli
    562    		 38409277 Assembly1
    rna:71:1901~1930 1407~1410,1494~1496,1517
    rna:V2:5~68 530,693,926,1196,1397,1400~140
    3,1492~1493,1498,1505,1535~154
    2
    rna:W1:8~48 790,966,1229~1230,1338~1340,14
    00
    rna:Y1:8~48 530,1054,1493
    12817 8r3v:A2
    (3.28Å)
    		 1537 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00177
    RF01959
    RF02542
    RF01960    		 Escherichia
    coli
    562    		 38409277 Assembly1
    rna:72:1~2904 702,783~784,899,1407~1409,1418
    ,1428~1429,1473~1475,1483~1484
    ,1494~1495,1517
    rna:V2:5~68 530,693,1196,1397,1400~1403,14
    92~1493,1498,1534~1537
    rna:W:1~76 790,966,1229~1230,1338~1340,14
    00
    rna:Y2:1~76 530,1054,1493
    12818 8r3v:V2
    (3.28Å)
    		 64 N/A N/A N/A Escherichia
    coli
    562    		 38409277 Assembly1
    rna:A1:1~1542 6~15,17~18,20~28
    rna:A2:1~1537 40~43,47~48,51~58
    rna:W:1~76 50~53
    rna:W1:8~48 21~23
    rna:X2:1~77 48~49
    rna:Y1:8~48 24~26
    rna:Y2:1~76 54~57
    12819 8r3v:W
    (3.28Å)
    		 76 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Escherichia
    coli
    562    		 38409277 Assembly1
    rna:72:1~2904 11~12,74~76
    rna:A2:1~1537 30~32,34,38~41
    rna:V2:5~68 34~37
    12820 8r3v:W1
    (3.28Å)
    		 36 N/A N/A N/A Escherichia
    coli
    562    		 38409277 Assembly1
    rna:71:1901~1930 11~12
    rna:A1:1~1542 30~32,34,38~41
    rna:V2:5~68 34~37
    12821 8r3v:X2
    (3.28Å)
    		 77 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Escherichia
    coli
    562    		 38409277 Assembly1
    rna:72:1~2904 1,20,57,72~73,76~77
    rna:V2:5~68 36~37
    12822 8r3v:Y1
    (3.28Å)
    		 36 N/A N/A N/A Escherichia
    coli
    562    		 38409277 Assembly1
    rna:71:1901~1930 37~38
    rna:A1:1~1542 34~37
    rna:V2:5~68 34~37
    12823 8r3v:Y2
    (3.28Å)
    		 76 N/A N/A N/A Escherichia
    coli
    562    		 38409277 Assembly1
    rna:72:1~2904 19,38,52~53,56,64,74~76
    rna:A2:1~1537 34~37
    rna:V2:5~68 34~37
    12824 8r55:7
    (3.57Å)
    		 73 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00023358F7 RF00005 Bacillus
    subtilis
    1423    		 38177497 Assembly1
    rna:A:8~1540 34~37
    rna:V:434~466 34~37
    rna:X:2~2926 19,56,64,73
    12825 8r55:A
    (3.57Å)
    		 1533 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000197CF6E RF01959
    RF00177
    RF02542
    RF01960    		 Bacillus
    subtilis
    1423    		 38177497 Assembly1
    rna:7:1~73 539,1064,1503
    rna:U:1~76 799,976,1238~1239,1347~1349,14
    09
    rna:V:434~466 539,702,936,1205,1406,1409~141
    0,1412,1503,1508
    rna:X:2~2926 711,793,909,1416~1418,1427,143
    8,1493~1494,1502,1504~1505,152
    7
    12826 8r55:U
    (3.57Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00002C7A07 RF00005 Bacillus
    subtilis
    1423    		 38177497 Assembly1
    rna:A:8~1540 30~31,34,38~41
    rna:V:434~466 34~37
    rna:X:2~2926 12,74~76
    12827 8r55:V
    (3.57Å)
    		 33 N/A N/A N/A Bacillus
    subtilis
    1423    		 38177497 Assembly1
    rna:7:1~73 442~444
    rna:A:8~1540 436,438~444,446~447
    rna:U:1~76 439~441
    12828 8r55:X
    (3.57Å)
    		 2887 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00005906D8 RF02541 Bacillus
    subtilis
    1423    		 38177497 Assembly1
    rna:7:1~73 928~929,944,2511,2522~2523
    rna:A:8~1540 1748,1866,1875,1877,1941~1942,
    1945,1948~1949,1976~1977,1988~
    1989
    rna:U:1~76 1937,1952,2280~2282,2480,2614,
    2631
    rna:Y:3~114 908~911,962,964~966,1004
    12829 8r55:Y
    (3.57Å)
    		 112 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000BC467F RF00001 Bacillus
    subtilis
    1423    		 38177497 Assembly1
    rna:X:2~2926 76~79,87,94~95,97~99
    12830 8r60:D
    (3.23Å)
    		 15 N/A N/A N/A Influenza
    A
    virus
    (A/Brevig
    Mission/1/1918(H1N1))
    88776    		 38563748 Assembly1
    rna:E:1~8 12~13
    12831 8r62:A

    		 11 N/A URS0000BC466C N/A Homo
    sapiens
    9606    		 38554107 Assembly1
    rna:B:12~22 1,3~11
    12832 8r62:B

    		 11 N/A URS0000BC4661 N/A Homo
    sapiens
    9606    		 38554107 Assembly1
    rna:A:1~11 12~22
    12833 8r63:A

    		 11 N/A URS0000BC466C N/A Homo
    sapiens
    9606    		 38554107 Assembly1
    rna:B:12 1~10
    12834 8r63:B

    		 11 N/A URS0000BC4661 N/A Homo
    sapiens
    9606    		 38554107 Assembly1
    rna:A:1~11 12~22
    12835 8r65:D
    (4.23Å)
    		 15 N/A N/A N/A Influenza
    A
    virus
    (A/Brevig
    Mission/1/1918(H1N1))
    88776    		 38563748 Assembly1
    rna:E:1~8 12~13
    12836 8r6c:A
    (2.2Å)
    		 1519 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000081169C RF00177
    RF01959
    RF02542
    RF01960    		 Escherichia
    coli
    BW25113
    679895    		 38826346 Assembly1
    rna:X:13~22 693,926,1400~1402,1492~1493,14
    98,1505~1506
    rna:Y:1~76 530,1054,1493
    rna:Z:1~85 790,966,1229~1230,1338~1341,14
    00
    rna:a:1~2903 702,783~784,899,1407~1409,1418
    ,1420,1429,1473~1475,1483~1484
    ,1494~1496,1517
    12837 8r6c:X
    (2.2Å)
    		 10 N/A N/A N/A Escherichia
    coli
    BW25113
    679895    		 38826346 Assembly1
    rna:A:2~1534 13~20
    rna:Y:1~76 19~21
    rna:Z:1~85 16~18
    12838 8r6c:Y
    (2.2Å)
    		 73 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Escherichia
    coli
    BW25113
    679895    		 38826346 Assembly1
    rna:A:2~1534 34~37
    rna:X:13~22 34~37
    rna:a:1~2903 18,37~38,52,56,63,74~76
    12839 8r6c:Z
    (2.2Å)
    		 72 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Escherichia
    coli
    BW25113
    679895    		 38826346 Assembly1
    rna:A:2~1534 31~33,35,38~39,41~42
    rna:X:13~22 35~38
    rna:a:1~2903 11~13,25~26,83~85
    12840 8r6c:a
    (2.2Å)
    		 2753 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02541 Escherichia
    coli
    BW25113
    679895    		 38826346 Assembly1
    rna:5:75~76 2394~2395,2421~2422,2432
    rna:A:2~1534 1689,1700~1704,1832,1836~1837,
    1846,1848,1912~1916,1919~1920,
    1947~1948,1950,1959~1961
    rna:Y:1~76 896~897,1913,2470,2482,2506~25
    07,2553~2555,2583~2585,2602
    rna:Z:1~85 1907~1909,1922~1924,2251~2253,
    2450~2451,2602
    rna:b:1~119 861~864,915,917~919,958,2339~2
    340
    12841 8r6c:b
    (2.2Å)
    		 119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00001 Escherichia
    coli
    BW25113
    679895    		 38826346 Assembly1
    rna:a:1~2903 41,78~81,89~90,96~97,99~100
    12842 8r6u:P
    (2.98Å)
    		 16 N/A N/A N/A SFTS
    virus
    AH12
    992210    		 38709882 Assembly1
    rna:T:10~26 11~16
    12843 8r6u:T
    (2.98Å)
    		 17 N/A URS000268137D N/A SFTS
    virus
    AH12
    992210    		 38709882 Assembly1
    rna:P:1~16 10~15
    rna:G:1~4 23~26
    12844 8r6w:P
    (3.35Å)
    		 16 N/A N/A N/A SFTS
    virus
    AH12
    992210    		 38709882 Assembly1
    rna:T:10~26 11~16
    12845 8r6w:T
    (3.35Å)
    		 17 N/A URS000268137D N/A SFTS
    virus
    AH12
    992210    		 38709882 Assembly1
    rna:G:1~4 23~26
    rna:P:1~16 10~14,16
    12846 8r6y:P
    (3.4Å)
    		 16 N/A N/A N/A SFTS
    virus
    AH12
    992210    		 38709882 Assembly1
    rna:T:10~24 11~16
    12847 8r6y:T
    (3.4Å)
    		 15 N/A N/A N/A SFTS
    virus
    AH12
    992210    		 38709882 Assembly1
    rna:P:1~16 10~15
    rna:G:2~4 22~24
    12848 8r8m:A
    (2.4Å)
    		 1519 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000081169C RF00177
    RF01959
    RF02542
    RF01960    		 Escherichia
    coli
    BW25113
    679895    		 38826346 Assembly1
    rna:X:13~22 530,693,788~789,926,1397,1400~
    1402,1492~1493,1498,1505~1506
    rna:a:1~2903 1407~1409,1418~1420,1428,1474~
    1475,1483~1485,1493~1496,1517
    rna:Z:1~85 790,966,1229,1338~1340,1400
    rna:Y:1~76 530,1054,1493
    12849 8r8m:X
    (2.4Å)
    		 10 N/A N/A N/A Escherichia
    coli
    BW25113
    679895    		 38826346 Assembly1
    rna:A:2~1534 13~22
    rna:Z:1~85 16~18
    rna:Y:1~76 19~21
    12850 8r8m:Y
    (2.4Å)
    		 73 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Escherichia
    coli
    BW25113
    679895    		 38826346 Assembly1
    rna:X:13~22 34~37
    rna:a:1~2903 18,37~38,56,74~76
    rna:A:2~1534 34~37
    12851 8r8m:Z
    (2.4Å)
    		 72 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Escherichia
    coli
    BW25113
    679895    		 38826346 Assembly1
    rna:X:13~22 35~38
    rna:a:1~2903 3~4,79~81,84~85
    rna:A:2~1534 31~33,35,38~43
    12852 8r8m:a
    (2.4Å)
    		 2738 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02541 Escherichia
    coli
    BW25113
    679895    		 38826346 Assembly1
    rna:b:1~119 861~863,915,917~919,958,2339~2
    340
    rna:A:2~1534 1689,1700~1701,1703,1912~1916,
    1919~1920,1947~1950,1959~1961
    rna:Z:1~85 1850~1852,1891~1893,2394~2395,
    2421~2422,2432
    rna:Y:1~76 1913,2064,2251~2253,2309,2450~
    2451
    12853 8r8m:b
    (2.4Å)
    		 119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00001 Escherichia
    coli
    BW25113
    679895    		 38826346 Assembly1
    rna:a:1~2903 41,78~81,89~90,96~97,99~100
    12854 8r8p:A

    		 11 N/A URS0000BC466C N/A Homo
    sapiens
    9606    		 38554107 Assembly1
    rna:B:12 1~10
    12855 8r8p:B

    		 11 N/A URS0000BC4661 N/A Homo
    sapiens
    9606    		 38554107 Assembly1
    rna:A:1~11 12~22
    12856 8rcl:71
    (3.49Å)
    		 30 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02541 Escherichia
    coli
    562    		 38409277 Assembly1
    rna:A1:1~1542 1912~1916,1919~1920
    rna:W1:8~48 1907~1908,1923
    12857 8rcl:72
    (3.49Å)
    		 2904 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02541 Escherichia
    coli
    562    		 38409277 Assembly1
    rna:82:1~120 861~863,915~918
    rna:A1:1~1542 2140~2141
    rna:A2:1~1537 1700~1704,1832,1836~1837,1846,
    1848,1912~1916,1919~1920,1947~
    1948,1959~1960
    rna:W:1~76 1908~1909,1923,2063~2064,2251~
    2253,2450~2451,2602
    rna:X2:1~77 1851~1852,2112,2394~2395,2421~
    2422,2432
    rna:Y2:1~76 896,1913,2469~2470,2482,2506~2
    507,2553~2555,2583~2584,2602
    12858 8rcl:82
    (3.49Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00001 Escherichia
    coli
    562    		 38409277 Assembly1
    rna:72:1~2904 79~81,99~100
    12859 8rcl:A1
    (3.49Å)
    		 1542 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00177
    RF01959
    RF02542
    RF01960    		 Escherichia
    coli
    562    		 38409277 Assembly1
    rna:71:1901~1930 1407~1410,1494~1496,1517
    rna:V2:5~68 530,693,926,1196,1397,1400~140
    2,1492~1493,1498,1505,1535~154
    1
    rna:W1:8~48 790,966,1229~1230,1338~1340,14
    00
    rna:Y1:8~48 530,1054,1493
    12860 8rcl:A2
    (3.49Å)
    		 1537 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00177
    RF01959
    RF02542
    RF01960    		 Escherichia
    coli
    562    		 38409277 Assembly1
    rna:72:1~2904 702,783~784,899,1407~1409,1418
    ,1428~1429,1473~1474,1483~1484
    ,1494~1495,1517
    rna:V2:5~68 693,1196,1397,1400~1403,1492~1
    493,1498,1534~1537
    rna:W:1~76 790,966,1229~1230,1338~1340,14
    00
    rna:Y2:1~76 530,1054,1493
    12861 8rcl:V2
    (3.49Å)
    		 64 N/A N/A N/A Escherichia
    coli
    562    		 38409277 Assembly1
    rna:A1:1~1542 6~15,17~18,20~28
    rna:A2:1~1537 40~44,47~48,51~55,57~58
    rna:W:1~76 50~53
    rna:W1:8~48 21~23
    rna:X2:1~77 48~49
    rna:Y1:8~48 24~26
    rna:Y2:1~76 54~57
    12862 8rcl:W
    (3.49Å)
    		 76 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Escherichia
    coli
    562    		 38409277 Assembly1
    rna:72:1~2904 11~12,74~76
    rna:A2:1~1537 30~31,34,38~41
    rna:V2:5~68 34~37
    12863 8rcl:W1
    (3.49Å)
    		 36 N/A N/A N/A Escherichia
    coli
    562    		 38409277 Assembly1
    rna:A1:1~1542 30~32,34,38~41
    rna:V2:5~68 34~37
    12864 8rcl:X2
    (3.49Å)
    		 77 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Escherichia
    coli
    562    		 38409277 Assembly1
    rna:72:1~2904 1,20,57,71~73,76~77
    rna:V2:5~68 36~37
    12865 8rcl:Y1
    (3.49Å)
    		 36 N/A N/A N/A Escherichia
    coli
    562    		 38409277 Assembly1
    rna:71:1901~1930 37~38
    rna:A1:1~1542 34~37
    rna:V2:5~68 34~37
    12866 8rcl:Y2
    (3.49Å)
    		 76 N/A N/A N/A Escherichia
    coli
    562    		 38409277 Assembly1
    rna:72:1~2904 19,38,52~54,56,64,74~76
    rna:A2:1~1537 34~37
    rna:V2:5~68 34~37
    12867 8rcm:71
    (3.59Å)
    		 19 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02541 Escherichia
    coli
    562    		 38409277 Assembly1
    rna:A1:1~1542 1912~1914,1916,1919~1920,1922
    rna:W1:8~48 1907~1908,1923
    12868 8rcm:72
    (3.59Å)
    		 2904 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02541 Escherichia
    coli
    562    		 38409277 Assembly1
    rna:82:1~120 861,863,915~918
    rna:A2:1~1537 1700~1703,1832,1836~1837,1846,
    1848,1912~1916,1919~1920,1947~
    1948,1959~1960
    rna:W:1~76 1909,1923,2063~2064,2251~2253,
    2450~2451
    rna:X2:1~77 1851~1852,2112,2168,2394~2395,
    2421~2422,2432
    rna:Y2:1~76 896,1913,2470,2482,2507,2553~2
    555,2602
    12869 8rcm:82
    (3.59Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00001 Escherichia
    coli
    562    		 38409277 Assembly1
    rna:72:1~2904 79~81,99~100
    12870 8rcm:A1
    (3.59Å)
    		 1542 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00177
    RF01959
    RF02542
    RF01960    		 Escherichia
    coli
    562    		 38409277 Assembly1
    rna:71:1906~1924 791,1407~1409,1494~1495,1517
    rna:V2:8~65 693,926,1196,1397,1400~1403,14
    93,1498,1505,1535~1540
    rna:W1:8~48 790,966,1229~1230,1338~1340,14
    00
    rna:Y1:8~48 530,955,1054,1493
    12871 8rcm:A2
    (3.59Å)
    		 1537 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00177
    RF01959
    RF02542
    RF01960    		 Escherichia
    coli
    562    		 38409277 Assembly1
    rna:72:1~2904 702,783~784,899,1407~1409,1418
    ,1428~1429,1473~1475,1483~1484
    ,1494~1496,1517
    rna:V2:8~65 693,926,1196,1397,1400~1403,14
    92~1493,1498,1534~1537
    rna:W:1~76 790,966,1229~1230,1338~1340,14
    00
    rna:Y2:1~76 530,1054,1493
    12872 8rcm:V2
    (3.59Å)
    		 58 N/A N/A N/A Escherichia
    coli
    562    		 38409277 Assembly1
    rna:A1:1~1542 8,10~15,17~18,20~24,27~28
    rna:A2:1~1537 40~43,48,50~55,57~58
    rna:W:1~76 51~53
    rna:W1:8~48 21~23
    rna:X2:1~77 48~49
    rna:Y1:8~48 24~26
    rna:Y2:1~76 54~57
    12873 8rcm:W
    (3.59Å)
    		 76 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Escherichia
    coli
    562    		 38409277 Assembly1
    rna:72:1~2904 11~12,74~76
    rna:A2:1~1537 30~31,34,38,40~41
    rna:V2:8~65 34~37
    12874 8rcm:W1
    (3.59Å)
    		 36 N/A N/A N/A Escherichia
    coli
    562    		 38409277 Assembly1
    rna:A1:1~1542 30~32,34,38~41
    rna:V2:8~65 34~37
    12875 8rcm:X2
    (3.59Å)
    		 77 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Escherichia
    coli
    562    		 38409277 Assembly1
    rna:72:1~2904 1,20,57,71~73,76~77
    rna:V2:8~65 35~37
    12876 8rcm:Y1
    (3.59Å)
    		 36 N/A N/A N/A Escherichia
    coli
    562    		 38409277 Assembly1
    rna:71:1906~1924 37~38
    rna:A1:1~1542 34~37,41
    rna:V2:8~65 34~37
    12877 8rcm:Y2
    (3.59Å)
    		 76 N/A N/A N/A Escherichia
    coli
    562    		 38409277 Assembly1
    rna:72:1~2904 19,52,56,64,74~76
    rna:A2:1~1537 34~37
    rna:V2:8~65 34~37
    12878 8rcs:71
    (4.46Å)
    		 19 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02541 Escherichia
    coli
    562    		 38409277 Assembly1
    rna:A1:1~1542 1912~1916,1919~1920
    rna:W1:8~46 1907,1909,1923~1924
    12879 8rcs:72
    (4.46Å)
    		 2904 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02541 Escherichia
    coli
    562    		 38409277 Assembly1
    rna:82:1~120 861~863,915~919,958
    rna:A1:1~1542 2153~2154
    rna:A2:1~1537 1846~1847,1912~1916,1919~1920,
    1949~1950,1959~1961
    rna:W:1~76 1850~1851,1891~1893,2112,2168,
    2394~2395,2421~2422,2432
    rna:Y:1~76 2063~2064,2251~2253,2450~2451,
    2602
    12880 8rcs:82
    (4.46Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00001 Escherichia
    coli
    562    		 38409277 Assembly1
    rna:72:1~2904 78~81,90,97,99~101
    12881 8rcs:A1
    (4.46Å)
    		 1542 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00177
    RF01959
    RF02542
    RF01960    		 Escherichia
    coli
    562    		 38409277 Assembly1
    rna:71:1906~1924 1407~1410,1494~1496,1517
    rna:V2:5~63 693,926,1196,1397,1400~1403,14
    92~1493,1498,1505,1535~1542
    rna:W1:8~46 790,966,1229~1230,1338~1341,14
    00
    rna:Y1:8~48 530,1054,1493
    12882 8rcs:A2
    (4.46Å)
    		 1537 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00177
    RF01959
    RF02542
    RF01960    		 Escherichia
    coli
    562    		 38409277 Assembly1
    rna:72:1~2904 702,1407~1409,1418,1420,1483~1
    484,1493~1495,1517
    rna:V2:5~63 926,1397,1400~1401,1492~1493,1
    498,1534~1537
    rna:W:1~76 790,966,1230,1338~1340,1400
    rna:Y:1~76 530,955,1054,1492~1493
    12883 8rcs:V2
    (4.46Å)
    		 59 N/A N/A N/A Escherichia
    coli
    562    		 38409277 Assembly1
    rna:A1:1~1542 6~15,17~18,20~25,28
    rna:A2:1~1537 40~44,50~55,57~58
    rna:W:1~76 51~53
    rna:W1:8~46 21~23
    rna:Y:1~76 54~56
    rna:Y1:8~48 24~26
    12884 8rcs:W
    (4.46Å)
    		 76 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Escherichia
    coli
    562    		 38409277 Assembly1
    rna:72:1~2904 3~4,19~20,56,70~72,75~76
    rna:A2:1~1537 30~31,34,38~42
    rna:V2:5~63 34~37
    12885 8rcs:W1
    (4.46Å)
    		 33 N/A N/A N/A Escherichia
    coli
    562    		 38409277 Assembly1
    rna:71:1906~1924 12~13
    rna:A1:1~1542 29~32,34,38~42
    rna:V2:5~63 34~37
    12886 8rcs:Y
    (4.46Å)
    		 76 N/A N/A N/A Escherichia
    coli
    562    		 38409277 Assembly1
    rna:72:1~2904 74~76
    rna:A2:1~1537 34~36,41
    rna:V2:5~63 34~37
    12887 8rcs:Y1
    (4.46Å)
    		 36 N/A N/A N/A Escherichia
    coli
    562    		 38409277 Assembly1
    rna:71:1906~1924 37~38
    rna:A1:1~1542 34~37
    rna:V2:5~63 34~37
    12888 8rct:71
    (5.32Å)
    		 19 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02541 Escherichia
    coli
    562    		 38409277 Assembly1
    rna:A1:1~1542 1912~1916,1919~1920
    rna:W1:8~48 1907,1909,1923~1924
    12889 8rct:72
    (5.32Å)
    		 2904 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02541 Escherichia
    coli
    562    		 38409277 Assembly1
    rna:82:1~120 861~863,915~919,958
    rna:A2:1~1537 1846~1847,1912~1916,1919~1920,
    1949~1950,1959~1961
    rna:W:1~76 1850~1851,1891~1893,2112,2168,
    2394~2395,2421~2422,2432
    rna:Y:1~76 2063~2064,2251~2253,2450~2451,
    2602
    12890 8rct:82
    (5.32Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00001 Escherichia
    coli
    562    		 38409277 Assembly1
    rna:72:1~2904 78~81,90,97,99~100
    12891 8rct:A1
    (5.32Å)
    		 1542 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00177
    RF01959
    RF02542
    RF01960    		 Escherichia
    coli
    562    		 38409277 Assembly1
    rna:71:1906~1924 1407~1410,1494~1496,1517
    rna:V2:5~63 530,693,926,1196,1397,1400~140
    3,1492~1493,1498,1505,1535~154
    2
    rna:W1:8~48 790,966,1229~1230,1338~1341,14
    00
    rna:Y1:8~48 530,1054,1493
    12892 8rct:A2
    (5.32Å)
    		 1537 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00177
    RF01959
    RF02542
    RF01960    		 Escherichia
    coli
    562    		 38409277 Assembly1
    rna:72:1~2904 702,1407~1410,1418,1420,1483~1
    484,1491,1493~1496,1517
    rna:V2:5~63 926,1397,1400~1401,1492~1493,1
    498,1534~1537
    rna:W:1~76 790,966,1229~1230,1338~1340,14
    00
    rna:Y:1~76 530,955,1054,1492~1493
    12893 8rct:V2
    (5.32Å)
    		 59 N/A N/A N/A Escherichia
    coli
    562    		 38409277 Assembly1
    rna:A1:1~1542 6~15,17~18,20~28
    rna:A2:1~1537 41~44,50~55,57~58
    rna:W:1~76 51~53
    rna:W1:8~48 21~23
    rna:Y:1~76 54~56
    rna:Y1:8~48 24~26
    12894 8rct:W
    (5.32Å)
    		 76 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Escherichia
    coli
    562    		 38409277 Assembly1
    rna:72:1~2904 3~4,19,56,70~72,75~76
    rna:A2:1~1537 30~31,34,38~42
    rna:V2:5~63 34~37
    12895 8rct:W1
    (5.32Å)
    		 36 N/A N/A N/A Escherichia
    coli
    562    		 38409277 Assembly1
    rna:71:1906~1924 12~13
    rna:A1:1~1542 29~32,34,38~42
    rna:V2:5~63 34~37
    12896 8rct:Y
    (5.32Å)
    		 76 N/A N/A N/A Escherichia
    coli
    562    		 38409277 Assembly1
    rna:72:1~2904 74~76
    rna:A2:1~1537 34~37,41
    rna:V2:5~63 34~37
    12897 8rct:Y1
    (5.32Å)
    		 36 N/A N/A N/A Escherichia
    coli
    562    		 38409277 Assembly1
    rna:71:1906~1924 37~38
    rna:A1:1~1542 34~37
    rna:V2:5~63 34~37
    12898 8rd8:D8
    (2.62Å)
    		 115 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00001 Psychrobacter
    urativorans
    45610    		 38355796 Assembly1
    rna:Z2:9~2868 76~79,94,96~97
    12899 8rd8:Z2
    (2.62Å)
    		 2705 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02541 Psychrobacter
    urativorans
    45610    		 38355796 Assembly1
    rna:D8:1~115 846~849,900,902~904
    rna:iN:48~1578 1688~1689,1691~1692,1818,1823,
    1832,1834,1898~1902,1905~1906,
    1933~1936,1945~1947
    12900 8rd8:iN
    (2.62Å)
    		 1503 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00177
    RF01959
    RF02542
    RF01960    		 Psychrobacter
    urativorans
    45610    		 38355796 Assembly1
    rna:Z2:9~2868 746,828,943,1452~1454,1463~146
    5,1474~1475,1519,1528~1529,153
    7,1539~1541,1562
    << < 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 > >>
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    Reference:
  • Chengxin Zhang, Lydia Freddolino (2024) "FURNA: a database for function annotations of RNA structures," PLOS Biology 22(7): e3002476.