SEQ2FUN

FURNA
Download all results in tab-seperated text for 16611 RNAs.
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  • Hover over Ligand to view the name of the ligand and the ligand-binding nucleotides on the RNA.

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    # PDB
    (Resolution)    		 Length EC number
    & GO term     		RNAcentral Rfam Taxon PubMed ATtRACT
    motif     		Ligand &
    binding nucleotides
    12801 8qrn:5
    (2.98Å)
    		 71 N/A URS0000D77905 N/A Homo
    sapiens
    9606    		 38969660
    749

    996

    779

    M043_0.6

    1144    		 Assembly1
    rna:A:648~1602 30~31,34,38~39,41
    rna:6:1~3 34~37
    12802 8qrn:A
    (2.98Å)
    		 955 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0001A24B4C RF00177 Homo
    sapiens
    9606    		 38969660
    1321

    886

    1302

    156

    748

    749

    1207

    M027_0.6

    979

    M089_0.6

    82

    495

    175

    399

    492

    s44

    M043_0.6

    M033_0.6

    M329_0.6

    1194

    1197

    1196

    938

    M142_0.6

    509

    1290

    1031

    760

    994

    M164_0.6

    1312

    1273

    779

    778

    s14

    120

    121

    M047_0.6

    M169_0.6

    M274_0.6

    M325_0.6

    1354

    78

    800

    17

    1186

    M331_0.6

    1241

    M143_0.6

    1364

    M016_0.6

    33

    s61    		 Assembly1
    rna:5:1~76 1078,1220,1358~1359,1422~1424,
    1484
    rna:6:1~3 1179,1484~1485,1563,1570
    12803 8qxd:2
    (9.6Å)
    		 97 GO:0045131 (F) pre-mRNA branch point b...
    GO:0000348 (P) mRNA branch site recogn...
    GO:0005686 (C) U2 snRNP    		 URS0002915749 RF00004 Homo
    sapiens
    9606    		 38778104
    504    		 Assembly1
    rna:6:31~106 3~12
    rna:Z:29~43 32~44
    12804 8qxd:4
    (9.6Å)
    		 124 GO:0017070 (F) U6 snRNA binding
    GO:0000244 (P) spliceosomal tri-snRNP ...
    GO:0000353 (P) formation of quadruple ...
    GO:0005687 (C) U4 snRNP
    GO:0046540 (C) U4/U6 x U5 tri-snRNP co...    		 URS00003F07BD RF00015 Homo
    sapiens
    9606    		 38778104
    750

    780

    583

    993    		 Assembly1
    rna:6:31~106 1~17,21,55~64,66~68,73~78
    12805 8qxd:6
    (9.6Å)
    		 53 GO:0030621 (F) U4 snRNA binding
    GO:0000244 (P) spliceosomal tri-snRNP ...
    GO:0000353 (P) formation of quadruple ...
    GO:0005688 (C) U6 snRNP
    GO:0046540 (C) U4/U6 x U5 tri-snRNP co...    		 URS0002915756 RF00026 Homo
    sapiens
    9606    		 38778104
    1334

    s59

    M021_0.6    		 Assembly1
    rna:2:3~184 86~88,90~95
    rna:4:1~144 31~36,47,49~75
    12806 8qxd:Z
    (9.6Å)
    		 15 N/A N/A N/A Homo
    sapiens
    9606    		 38778104 Assembly1
    rna:2:3~184 30,32~40,42~43
    12807 8qyx:A2
    (1.78Å)
    		 3706 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0002F12CA1 RF02543 Homo
    sapiens
    9606    		 39658079
    M054_0.6

    1306

    769

    706

    1303

    762

    872

    1148

    1149

    764

    167

    21

    1079

    930

    1029

    1075

    1072

    1073

    s77

    1071

    819

    1373

    938

    1375

    s52

    s50

    931

    M272_0.6

    936

    s59

    995

    994

    595

    1314

    991

    1312

    1311

    1028

    1150

    123

    124

    125

    1068

    s72

    1060

    s100

    s102

    52

    533

    M227_0.6

    1384

    375

    926

    822

    1128

    988

    1321

    708

    705

    1328

    707

    1124

    987

    1126

    703

    M077_0.6

    1237

    83

    1181

    797

    796

    795

    836

    837

    791

    790

    838

    1334

    s70

    1016

    1017

    1393

    610

    1012

    1013

    1236

    M290_0.6

    763

    1231

    1232

    1233

    1335

    s17

    M109_0.6

    1336

    1331

    1239

    1333

    589

    776

    s96

    s99

    M273_0.6

    1389

    902

    821

    900

    901

    906

    905

    33

    s48

    970

    M044_0.6

    1245

    s62

    s61

    1227

    883

    M035_0.6

    1223

    M156_0.6

    604

    M320_0.6

    1347

    60

    s81

    M349_0.6

    1083

    175

    977

    976

    974

    852

    853

    M154_0.6

    884

    s55

    979

    M153_0.6

    183

    1238

    185

    546

    815

    1036

    503

    1034

    1035

    1212

    M102_0.6

    1211

    1216

    1042

    986

    467

    M148_0.6

    1354

    M103_0.6

    169

    91

    1127

    M070_0.6

    1026

    M020_0.6

    M050_0.6

    1187

    1182

    1183

    1037

    727

    M347_0.6

    722

    935

    M086_0.6

    1164

    1165

    1166

    606

    886

    156

    748

    749

    608

    M061_0.6

    958

    1055

    878

    879

    1059

    953

    952

    42

    954

    957

    1107

    1352

    774

    1215

    M104_0.6

    1173

    770

    773

    1271

    1272

    1273

    779

    778

    1178

    M151_0.6

    78

    1285

    M083_0.6

    1041

    1040

    1043

    1045

    1044

    1288

    354

    1360

    684

    800

    1368    		 Assembly1
    rna:B2:1~119 1736~1738,1741,1792~1796,1894,
    1909,1936,1942
    rna:C2:1~156 1~22,58,146,339,341~348,350~35
    3,355~357,360,362,379~380,409,
    415~430,1304~1305,1333~1334,13
    71,2308~2309,2312~2313,2333~23
    34,2355,2444,2472,2488,2494,25
    08,2544~2545,2778~2780,3890
    12808 8qyx:B2
    (1.78Å)
    		 119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000002B0D5 RF00001 Homo
    sapiens
    9606    		 39658079
    931

    1290

    s51

    879    		 Assembly1
    rna:A2:1~5069 77~80,84,88,98,100~101,103
    12809 8qyx:C2
    (1.78Å)
    		 156 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000005270 RF00002 Homo
    sapiens
    9606    		 39658079
    1227

    592

    M106_0.6

    993

    1215

    1352

    s37

    1238

    1178

    M085_0.6

    1389

    1360

    589    		 Assembly1
    rna:A2:1~5069 3~22,24~37,40~41,53~54,103,108
    ,110~113,123~127,136,138~149,1
    51~156
    12810 8qz8:V
    (3.13Å)
    		 33 N/A URS00029156D5 N/A Tilapia
    lake
    virus
    1549864    		 38066000 Assembly1
    rna:P:24~32 20~28
    12811 8qzs:2
    (4.1Å)
    		 98 GO:0045131 (F) pre-mRNA branch point b...
    GO:0000348 (P) mRNA branch site recogn...
    GO:0005686 (C) U2 snRNP    		 URS0000E60B66 RF00004 Homo
    sapiens
    9606    		 38778104
    504    		 Assembly1
    rna:6:36~105 3~12,14
    rna:Z:29~43 33~44
    12812 8qzs:4
    (4.1Å)
    		 136 GO:0017070 (F) U6 snRNA binding
    GO:0000244 (P) spliceosomal tri-snRNP ...
    GO:0000353 (P) formation of quadruple ...
    GO:0005687 (C) U4 snRNP
    GO:0046540 (C) U4/U6 x U5 tri-snRNP co...    		 URS00003F07BD RF00015 Homo
    sapiens
    9606    		 38778104
    995

    1368    		 Assembly1
    rna:6:36~105 1~18,21~22,55~61
    12813 8qzs:5
    (4.1Å)
    		 109 GO:0000244 (P) spliceosomal tri-snRNP ...
    GO:0000353 (P) formation of quadruple ...
    GO:0005682 (C) U5 snRNP
    GO:0046540 (C) U4/U6 x U5 tri-snRNP co...    		 URS000075BAAE RF00020 Homo
    sapiens
    9606    		 38778104
    1213

    M150_0.6

    1263

    1267

    42

    M158_0.6

    1355

    M025_0.6

    M075_0.6

    185

    s67

    1274

    1392

    1390    		 Assembly1
    rna:z1:-3~8 40~43
    12814 8qzs:6
    (4.1Å)
    		 59 GO:0030621 (F) U4 snRNA binding
    GO:0000244 (P) spliceosomal tri-snRNP ...
    GO:0000353 (P) formation of quadruple ...
    GO:0005688 (C) U6 snRNP
    GO:0046540 (C) U4/U6 x U5 tri-snRNP co...    		 URS000035C796 RF00026 Homo
    sapiens
    9606    		 38778104
    1334

    s59

    M021_0.6    		 Assembly1
    rna:2:3~184 85~95
    rna:4:1~144 51~75
    rna:z1:-3~8 40~43,46
    rna:z2:-3~1 36~39
    12815 8qzs:Z
    (4.1Å)
    		 15 N/A N/A N/A Homo
    sapiens
    9606    		 38778104 Assembly1
    rna:2:3~184 30,32~39,42~43
    12816 8qzs:z1
    (4.1Å)
    		 11 N/A URS0002915747 N/A Homo
    sapiens
    9606    		 38778104 Assembly1
    rna:5:3~117 -3~-1
    rna:6:36~105 3~7
    12817 8r08:2
    (6.1Å)
    		 97 GO:0045131 (F) pre-mRNA branch point b...
    GO:0000348 (P) mRNA branch site recogn...
    GO:0005686 (C) U2 snRNP    		 URS00003EE995 RF00004 Homo
    sapiens
    9606    		 38778104
    504    		 Assembly1
    rna:Z:29~43 33~44
    rna:6:31~106 3~13
    12818 8r08:4
    (6.1Å)
    		 124 GO:0017070 (F) U6 snRNA binding
    GO:0000244 (P) spliceosomal tri-snRNP ...
    GO:0000353 (P) formation of quadruple ...
    GO:0005687 (C) U4 snRNP
    GO:0046540 (C) U4/U6 x U5 tri-snRNP co...    		 URS00003F07BD RF00015 Homo
    sapiens
    9606    		 38778104
    750

    780

    583

    993    		 Assembly1
    rna:6:31~106 1~17,55~64,66~68,73~80
    12819 8r08:6
    (6.1Å)
    		 53 GO:0030621 (F) U4 snRNA binding
    GO:0000244 (P) spliceosomal tri-snRNP ...
    GO:0000353 (P) formation of quadruple ...
    GO:0005688 (C) U6 snRNP
    GO:0046540 (C) U4/U6 x U5 tri-snRNP co...    		 URS000035C796 RF00026 Homo
    sapiens
    9606    		 38778104
    1334

    s59

    M021_0.6    		 Assembly1
    rna:2:3~184 86~88,90~95
    rna:4:1~144 31~36,47,49~75
    12820 8r08:Z
    (6.1Å)
    		 15 N/A N/A N/A Homo
    sapiens
    9606    		 38778104 Assembly1
    rna:2:3~184 30,32~40,42~43
    12821 8r09:2
    (4.3Å)
    		 98 GO:0045131 (F) pre-mRNA branch point b...
    GO:0000348 (P) mRNA branch site recogn...
    GO:0005686 (C) U2 snRNP    		 URS00003EE995 RF00004 Homo
    sapiens
    9606    		 38778104
    504    		 Assembly1
    rna:Z:29~43 33~44
    rna:6:31~106 3~14
    12822 8r09:4
    (4.3Å)
    		 128 GO:0017070 (F) U6 snRNA binding
    GO:0000244 (P) spliceosomal tri-snRNP ...
    GO:0000353 (P) formation of quadruple ...
    GO:0005687 (C) U4 snRNP
    GO:0046540 (C) U4/U6 x U5 tri-snRNP co...    		 URS00003F07BD RF00015 Homo
    sapiens
    9606    		 38778104
    993

    1368

    583    		 Assembly1
    rna:z:-3~8 70,72~73
    rna:6:31~106 1~18,21,55~62,75~78
    12823 8r09:5
    (4.3Å)
    		 112 GO:0000244 (P) spliceosomal tri-snRNP ...
    GO:0000353 (P) formation of quadruple ...
    GO:0005682 (C) U5 snRNP
    GO:0046540 (C) U4/U6 x U5 tri-snRNP co...    		 URS000075BAAE RF00020 Homo
    sapiens
    9606    		 38778104
    1213

    M150_0.6

    1263

    1267

    42

    M158_0.6

    1355

    M025_0.6

    M075_0.6

    185

    s67

    1274

    1392

    1390    		 Assembly1
    rna:z:-3~8 40~43
    12824 8r09:6
    (4.3Å)
    		 65 GO:0030621 (F) U4 snRNA binding
    GO:0000244 (P) spliceosomal tri-snRNP ...
    GO:0000353 (P) formation of quadruple ...
    GO:0005688 (C) U6 snRNP
    GO:0046540 (C) U4/U6 x U5 tri-snRNP co...    		 URS000035C796 RF00026 Homo
    sapiens
    9606    		 38778104
    1334

    s59

    M021_0.6    		 Assembly1
    rna:2:3~184 85~88,90~95
    rna:z:-3~8 39~44,46
    rna:4:1~144 31~34,38~39,51~75
    12825 8r09:Z
    (4.3Å)
    		 15 N/A N/A N/A Homo
    sapiens
    9606    		 38778104 Assembly1
    rna:2:3~184 30,32~39,42~43
    12826 8r09:z
    (4.3Å)
    		 11 N/A URS0002915747 N/A Homo
    sapiens
    9606    		 38778104 Assembly1
    rna:5:3~117 -3~-1
    rna:4:1~144 7~8
    rna:6:31~106 3~8
    12827 8r0a:2
    (5.8Å)
    		 97 GO:0045131 (F) pre-mRNA branch point b...
    GO:0000348 (P) mRNA branch site recogn...
    GO:0005686 (C) U2 snRNP    		 URS00003EE995 RF00004 Homo
    sapiens
    9606    		 38778104
    504    		 Assembly1
    rna:Z:29~43 33~44
    rna:6:31~106 3~12
    12828 8r0a:4
    (5.8Å)
    		 124 GO:0017070 (F) U6 snRNA binding
    GO:0000244 (P) spliceosomal tri-snRNP ...
    GO:0000353 (P) formation of quadruple ...
    GO:0005687 (C) U4 snRNP
    GO:0046540 (C) U4/U6 x U5 tri-snRNP co...    		 URS00003F07BD RF00015 Homo
    sapiens
    9606    		 38778104
    750

    780

    583

    993    		 Assembly1
    rna:6:31~106 1~17,55~64,66~68,74~80
    12829 8r0a:5
    (5.8Å)
    		 115 GO:0000244 (P) spliceosomal tri-snRNP ...
    GO:0000353 (P) formation of quadruple ...
    GO:0005682 (C) U5 snRNP
    GO:0046540 (C) U4/U6 x U5 tri-snRNP co...    		 URS000075BAAE RF00020 Homo
    sapiens
    9606    		 38778104
    1213

    M150_0.6

    1263

    1267

    42

    M158_0.6

    1355

    M025_0.6

    M075_0.6

    185

    s67

    1274

    1392

    1390    		 Assembly1
    rna:z:-3~8 41~43
    12830 8r0a:6
    (5.8Å)
    		 59 GO:0030621 (F) U4 snRNA binding
    GO:0000244 (P) spliceosomal tri-snRNP ...
    GO:0000353 (P) formation of quadruple ...
    GO:0005688 (C) U6 snRNP
    GO:0046540 (C) U4/U6 x U5 tri-snRNP co...    		 URS000035C796 RF00026 Homo
    sapiens
    9606    		 38778104
    1334

    1168

    s59

    M021_0.6    		 Assembly1
    rna:z:-3~8 40~45
    rna:2:3~184 86~88,90~95
    rna:4:1~144 31~36,46~47,49~75
    12831 8r0a:Z
    (5.8Å)
    		 15 N/A N/A N/A Homo
    sapiens
    9606    		 38778104 Assembly1
    rna:2:3~184 30,32~40,42~43
    12832 8r0a:z
    (5.8Å)
    		 11 N/A URS0002915747 N/A Homo
    sapiens
    9606    		 38778104 Assembly1
    rna:5:3~117 -3~-1
    rna:6:31~106 3~8
    12833 8r0b:2
    (4.4Å)
    		 98 GO:0045131 (F) pre-mRNA branch point b...
    GO:0000348 (P) mRNA branch site recogn...
    GO:0005686 (C) U2 snRNP    		 URS00003EE995 RF00004 Homo
    sapiens
    9606    		 38778104
    504    		 Assembly1
    rna:6:31~106 3~14
    rna:Z:29~43 33~44
    12834 8r0b:4
    (4.4Å)
    		 128 GO:0017070 (F) U6 snRNA binding
    GO:0000244 (P) spliceosomal tri-snRNP ...
    GO:0000353 (P) formation of quadruple ...
    GO:0005687 (C) U4 snRNP
    GO:0046540 (C) U4/U6 x U5 tri-snRNP co...    		 URS00003F07BD RF00015 Homo
    sapiens
    9606    		 38778104
    993

    1368

    583    		 Assembly1
    rna:6:31~106 1~18,55~62,64,75~79
    rna:z:-5~8 72~74
    12835 8r0b:5
    (4.4Å)
    		 112 GO:0000244 (P) spliceosomal tri-snRNP ...
    GO:0000353 (P) formation of quadruple ...
    GO:0005682 (C) U5 snRNP
    GO:0046540 (C) U4/U6 x U5 tri-snRNP co...    		 URS000075BAAE RF00020 Homo
    sapiens
    9606    		 38778104
    1213

    M150_0.6

    1263

    1267

    42

    M158_0.6

    1355

    M025_0.6

    M075_0.6

    185

    s67

    1274

    1392

    1390    		 Assembly1
    rna:z:-5~8 40~44
    12836 8r0b:6
    (4.4Å)
    		 65 GO:0030621 (F) U4 snRNA binding
    GO:0000244 (P) spliceosomal tri-snRNP ...
    GO:0000353 (P) formation of quadruple ...
    GO:0005688 (C) U6 snRNP
    GO:0046540 (C) U4/U6 x U5 tri-snRNP co...    		 URS000035C796 RF00026 Homo
    sapiens
    9606    		 38778104
    1334

    s59

    M021_0.6    		 Assembly1
    rna:2:3~184 85~88,90~95
    rna:4:1~144 31,33~35,49,51~75
    rna:z:-5~8 39~41,43~44,46
    12837 8r0b:Z
    (4.4Å)
    		 15 N/A N/A N/A Homo
    sapiens
    9606    		 38778104 Assembly1
    rna:2:3~184 30,32~40,42~43
    12838 8r0b:z
    (4.4Å)
    		 13 N/A URS0002915755 N/A Homo
    sapiens
    9606    		 38778104 Assembly1
    rna:4:1~144 7~8
    rna:5:3~117 -5~-1
    rna:6:31~106 3~8
    12839 8r3k:M
    (3.43Å)
    		 10 N/A URS00029156F1 N/A Influenza
    A
    virus
    (A/Zhejiang/DTID-ZJU01/2013(H7N9))
    1318616    		 38316757 Assembly1
    rna:V:1~31 14~23
    12840 8r3k:V
    (3.43Å)
    		 31 N/A URS0002915740 N/A Influenza
    A
    virus
    (A/Zhejiang/DTID-ZJU01/2013(H7N9))
    1318616    		 38316757 Assembly1
    rna:M:14~23 17~26
    12841 8r3l:R
    (3.25Å)
    		 15 N/A URS0002915740 N/A Influenza
    A
    virus
    (A/Zhejiang/DTID-ZJU01/2013(H7N9))
    1318616    		 38316757 Assembly1
    rna:V:1~16 4~9
    12842 8r3l:V
    (3.25Å)
    		 16 N/A URS0002915740 N/A Influenza
    A
    virus
    (A/Zhejiang/DTID-ZJU01/2013(H7N9))
    1318616    		 38316757 Assembly1
    rna:R:4~18 11~14,16
    12843 8r3v:71
    (3.28Å)
    		 30 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0002915702 RF02541 Escherichia
    coli
    562    		 38409277 Assembly1
    rna:A1:1~1542 1912~1916,1919~1920
    rna:W1:8~48 1907~1909,1923
    12844 8r3v:72
    (3.28Å)
    		 2904 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0002915702 RF02541 Escherichia
    coli
    562    		 38409277 Assembly1
    rna:82:1~120 861~863,916~919
    rna:A1:1~1542 2139~2141
    rna:A2:1~1537 1686,1689,1700~1704,1832,1836~
    1837,1846,1848,1912~1916,1919~
    1920,1947~1948,1959~1960
    rna:W:1~76 1909,2063~2064,2251~2253,2450~
    2451,2602
    rna:X2:1~77 1851~1852,2112,2394~2395,2421~
    2422,2432
    rna:Y2:1~76 896,1913,2469~2471,2482,2507,2
    553~2555,2583~2584,2602
    12845 8r3v:82
    (3.28Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000049E57 RF00001 Escherichia
    coli
    562    		 38409277 Assembly1
    rna:72:1~2904 79~81,97,100
    12846 8r3v:A1
    (3.28Å)
    		 1542 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00000ABFE9 RF00177 Escherichia
    coli
    562    		 38409277 Assembly1
    rna:71:1901~1930 1407~1410,1494~1496,1517
    rna:V2:5~68 530,693,926,1196,1397,1400~140
    3,1492~1493,1498,1505,1535~154
    2
    rna:W1:8~48 790,966,1229~1230,1338~1340,14
    00
    rna:Y1:8~48 530,1054,1493
    12847 8r3v:A2
    (3.28Å)
    		 1537 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00000ABFE9 RF00177 Escherichia
    coli
    562    		 38409277 Assembly1
    rna:72:1~2904 702,783~784,899,1407~1409,1418
    ,1428~1429,1473~1475,1483~1484
    ,1494~1495,1517
    rna:V2:5~68 530,693,1196,1397,1400~1403,14
    92~1493,1498,1534~1537
    rna:W:1~76 790,966,1229~1230,1338~1340,14
    00
    rna:Y2:1~76 530,1054,1493
    12848 8r3v:V2
    (3.28Å)
    		 64 N/A N/A N/A Escherichia
    coli
    562    		 38409277 Assembly1
    rna:A1:1~1542 6~15,17~18,20~28
    rna:A2:1~1537 40~43,47~48,51~58
    rna:W:1~76 50~53
    rna:W1:8~48 21~23
    rna:X2:1~77 48~49
    rna:Y1:8~48 24~26
    rna:Y2:1~76 54~57
    12849 8r3v:W
    (3.28Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS0000AE709C RF00005 Escherichia
    coli
    562    		 38409277 Assembly1
    rna:72:1~2904 11~12,74~76
    rna:A2:1~1537 30~32,34,38~41
    rna:V2:5~68 34~37
    12850 8r3v:W1
    (3.28Å)
    		 36 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000024E9F9 RF00005 Escherichia
    coli
    562    		 38409277 Assembly1
    rna:71:1901~1930 11~12
    rna:A1:1~1542 30~32,34,38~41
    rna:V2:5~68 34~37
    12851 8r3v:X2
    (3.28Å)
    		 77 GO:0030533 (F) triplet codon-amino aci... URS0002915713 RF00005 Escherichia
    coli
    562    		 38409277 Assembly1
    rna:72:1~2904 1,20,57,72~73,76~77
    rna:V2:5~68 36~37
    12852 8r3v:Y1
    (3.28Å)
    		 36 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00003179F7 RF00005 Escherichia
    coli
    562    		 38409277 Assembly1
    rna:71:1901~1930 37~38
    rna:A1:1~1542 34~37
    rna:V2:5~68 34~37
    12853 8r3v:Y2
    (3.28Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00001C39A4 RF00005 Escherichia
    coli
    562    		 38409277 Assembly1
    rna:72:1~2904 19,38,52~53,56,64,74~76
    rna:A2:1~1537 34~37
    rna:V2:5~68 34~37
    12854 8r55:7
    (3.57Å)
    		 73 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00023358F7 RF00005 Bacillus
    subtilis
    1423    		 38177497 Assembly1
    rna:A:8~1540 34~37
    rna:V:434~466 34~37
    rna:X:2~2926 19,56,64,73
    12855 8r55:A
    (3.57Å)
    		 1533 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000197CF6E RF00177 Bacillus
    subtilis
    1423    		 38177497 Assembly1
    rna:7:1~73 539,1064,1503
    rna:U:1~76 799,976,1238~1239,1347~1349,14
    09
    rna:V:434~466 539,702,936,1205,1406,1409~141
    0,1412,1503,1508
    rna:X:2~2926 711,793,909,1416~1418,1427,143
    8,1493~1494,1502,1504~1505,152
    7
    12856 8r55:U
    (3.57Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00002C7A07 RF00005 Bacillus
    subtilis
    1423    		 38177497 Assembly1
    rna:A:8~1540 30~31,34,38~41
    rna:V:434~466 34~37
    rna:X:2~2926 12,74~76
    12857 8r55:V
    (3.57Å)
    		 33 N/A N/A N/A Bacillus
    subtilis
    1423    		 38177497 Assembly1
    rna:7:1~73 442~444
    rna:A:8~1540 436,438~444,446~447
    rna:U:1~76 439~441
    12858 8r55:X
    (3.57Å)
    		 2887 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00005906D8 RF02541 Bacillus
    subtilis
    1423    		 38177497 Assembly1
    rna:7:1~73 928~929,944,2511,2522~2523
    rna:A:8~1540 1748,1866,1875,1877,1941~1942,
    1945,1948~1949,1976~1977,1988~
    1989
    rna:U:1~76 1937,1952,2280~2282,2480,2614,
    2631
    rna:Y:3~114 908~911,962,964~966,1004
    12859 8r55:Y
    (3.57Å)
    		 112 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000BC467F RF00001 Bacillus
    subtilis
    1423    		 38177497 Assembly1
    rna:X:2~2926 76~79,87,94~95,97~99
    12860 8r60:D
    (3.23Å)
    		 15 N/A URS000197CF81 N/A Influenza
    A
    virus
    (A/Brevig
    Mission/1/1918(H1N1))
    88776    		 38563748 Assembly1
    rna:E:1~8 12~13
    12861 8r62:A

    		 11 N/A URS0000BC466C N/A Homo
    sapiens
    9606    		 38554107 Assembly1
    rna:B:12~22 1,3~11
    12862 8r62:B

    		 11 N/A URS0000BC4661 N/A Homo
    sapiens
    9606    		 38554107 Assembly1
    rna:A:1~11 12~22
    12863 8r63:A

    		 11 N/A URS0000BC466C N/A Homo
    sapiens
    9606    		 38554107 Assembly1
    rna:B:12 1~10
    12864 8r63:B

    		 11 N/A URS0000BC4661 N/A Homo
    sapiens
    9606    		 38554107 Assembly1
    rna:A:1~11 12~22
    12865 8r65:D
    (4.23Å)
    		 15 N/A URS000197CF81 N/A Influenza
    A
    virus
    (A/Brevig
    Mission/1/1918(H1N1))
    88776    		 38563748 Assembly1
    rna:E:1~8 12~13
    12866 8r6c:A
    (2.2Å)
    		 1519 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000081169C RF00177 Escherichia
    coli
    BW25113
    679895    		 38826346 Assembly1
    rna:X:13~22 693,926,1400~1402,1492~1493,14
    98,1505~1506
    rna:Y:1~76 530,1054,1493
    rna:Z:1~85 790,966,1229~1230,1338~1341,14
    00
    rna:a:1~2903 702,783~784,899,1407~1409,1418
    ,1420,1429,1473~1475,1483~1484
    ,1494~1496,1517
    12867 8r6c:X
    (2.2Å)
    		 10 N/A N/A N/A Escherichia
    coli
    BW25113
    679895    		 38826346 Assembly1
    rna:A:2~1534 13~20
    rna:Y:1~76 19~21
    rna:Z:1~85 16~18
    12868 8r6c:Y
    (2.2Å)
    		 73 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00004CF2CF RF00005 Escherichia
    coli
    BW25113
    679895    		 38826346 Assembly1
    rna:A:2~1534 34~37
    rna:X:13~22 34~37
    rna:a:1~2903 18,37~38,52,56,63,74~76
    12869 8r6c:Z
    (2.2Å)
    		 72 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS0000181AEC RF00005 Escherichia
    coli
    BW25113
    679895    		 38826346 Assembly1
    rna:A:2~1534 31~33,35,38~39,41~42
    rna:X:13~22 35~38
    rna:a:1~2903 11~13,25~26,83~85
    12870 8r6c:a
    (2.2Å)
    		 2753 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00023358D7 RF02541 Escherichia
    coli
    BW25113
    679895    		 38826346 Assembly1
    rna:5:75~76 2394~2395,2421~2422,2432
    rna:A:2~1534 1689,1700~1704,1832,1836~1837,
    1846,1848,1912~1916,1919~1920,
    1947~1948,1950,1959~1961
    rna:Y:1~76 896~897,1913,2470,2482,2506~25
    07,2553~2555,2583~2585,2602
    rna:Z:1~85 1907~1909,1922~1924,2251~2253,
    2450~2451,2602
    rna:b:1~119 861~864,915,917~919,958,2339~2
    340
    12871 8r6c:b
    (2.2Å)
    		 119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000049E57 RF00001 Escherichia
    coli
    BW25113
    679895    		 38826346 Assembly1
    rna:a:1~2903 41,78~81,89~90,96~97,99~100
    12872 8r6u:P
    (2.98Å)
    		 16 N/A URS0002681368 N/A SFTS
    virus
    AH12
    992210    		 38709882 Assembly1
    rna:T:10~26 11~16
    12873 8r6u:T
    (2.98Å)
    		 17 N/A URS000268137D N/A SFTS
    virus
    AH12
    992210    		 38709882 Assembly1
    rna:P:1~16 10~15
    rna:G:1~4 23~26
    12874 8r6w:P
    (3.35Å)
    		 16 N/A URS0002681368 N/A SFTS
    virus
    AH12
    992210    		 38709882 Assembly1
    rna:T:10~26 11~16
    12875 8r6w:T
    (3.35Å)
    		 17 N/A URS000268137D N/A SFTS
    virus
    AH12
    992210    		 38709882 Assembly1
    rna:G:1~4 23~26
    rna:P:1~16 10~14,16
    12876 8r6y:P
    (3.4Å)
    		 16 N/A URS0002681368 N/A SFTS
    virus
    AH12
    992210    		 38709882 Assembly1
    rna:T:10~24 11~16
    12877 8r6y:T
    (3.4Å)
    		 15 N/A URS0002915745 N/A SFTS
    virus
    AH12
    992210    		 38709882 Assembly1
    rna:P:1~16 10~15
    rna:G:2~4 22~24
    12878 8r8m:A
    (2.4Å)
    		 1519 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000081169C RF00177 Escherichia
    coli
    BW25113
    679895    		 38826346 Assembly1
    rna:X:13~22 530,693,788~789,926,1397,1400~
    1402,1492~1493,1498,1505~1506
    rna:a:1~2903 1407~1409,1418~1420,1428,1474~
    1475,1483~1485,1493~1496,1517
    rna:Z:1~85 790,966,1229,1338~1340,1400
    rna:Y:1~76 530,1054,1493
    12879 8r8m:X
    (2.4Å)
    		 10 N/A N/A N/A Escherichia
    coli
    BW25113
    679895    		 38826346 Assembly1
    rna:A:2~1534 13~22
    rna:Z:1~85 16~18
    rna:Y:1~76 19~21
    12880 8r8m:Y
    (2.4Å)
    		 73 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00004CF2CF RF00005 Escherichia
    coli
    BW25113
    679895    		 38826346 Assembly1
    rna:X:13~22 34~37
    rna:a:1~2903 18,37~38,56,74~76
    rna:A:2~1534 34~37
    12881 8r8m:Z
    (2.4Å)
    		 72 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS0000181AEC RF00005 Escherichia
    coli
    BW25113
    679895    		 38826346 Assembly1
    rna:X:13~22 35~38
    rna:a:1~2903 3~4,79~81,84~85
    rna:A:2~1534 31~33,35,38~43
    12882 8r8m:a
    (2.4Å)
    		 2738 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00023358D7 RF02541 Escherichia
    coli
    BW25113
    679895    		 38826346 Assembly1
    rna:b:1~119 861~863,915,917~919,958,2339~2
    340
    rna:A:2~1534 1689,1700~1701,1703,1912~1916,
    1919~1920,1947~1950,1959~1961
    rna:Z:1~85 1850~1852,1891~1893,2394~2395,
    2421~2422,2432
    rna:Y:1~76 1913,2064,2251~2253,2309,2450~
    2451
    12883 8r8m:b
    (2.4Å)
    		 119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000049E57 RF00001 Escherichia
    coli
    BW25113
    679895    		 38826346 Assembly1
    rna:a:1~2903 41,78~81,89~90,96~97,99~100
    12884 8r8p:A

    		 11 N/A URS0000BC466C N/A Homo
    sapiens
    9606    		 38554107 Assembly1
    rna:B:12 1~10
    12885 8r8p:B

    		 11 N/A URS0000BC4661 N/A Homo
    sapiens
    9606    		 38554107 Assembly1
    rna:A:1~11 12~22
    12886 8rcl:71
    (3.49Å)
    		 30 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0002915702 RF02541 Escherichia
    coli
    562    		 38409277 Assembly1
    rna:A1:1~1542 1912~1916,1919~1920
    rna:W1:8~48 1907~1908,1923
    12887 8rcl:72
    (3.49Å)
    		 2904 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0002915702 RF02541 Escherichia
    coli
    562    		 38409277 Assembly1
    rna:82:1~120 861~863,915~918
    rna:A1:1~1542 2140~2141
    rna:A2:1~1537 1700~1704,1832,1836~1837,1846,
    1848,1912~1916,1919~1920,1947~
    1948,1959~1960
    rna:W:1~76 1908~1909,1923,2063~2064,2251~
    2253,2450~2451,2602
    rna:X2:1~77 1851~1852,2112,2394~2395,2421~
    2422,2432
    rna:Y2:1~76 896,1913,2469~2470,2482,2506~2
    507,2553~2555,2583~2584,2602
    12888 8rcl:82
    (3.49Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000049E57 RF00001 Escherichia
    coli
    562    		 38409277 Assembly1
    rna:72:1~2904 79~81,99~100
    12889 8rcl:A1
    (3.49Å)
    		 1542 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00000ABFE9 RF00177 Escherichia
    coli
    562    		 38409277 Assembly1
    rna:71:1901~1930 1407~1410,1494~1496,1517
    rna:V2:5~68 530,693,926,1196,1397,1400~140
    2,1492~1493,1498,1505,1535~154
    1
    rna:W1:8~48 790,966,1229~1230,1338~1340,14
    00
    rna:Y1:8~48 530,1054,1493
    12890 8rcl:A2
    (3.49Å)
    		 1537 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00000ABFE9 RF00177 Escherichia
    coli
    562    		 38409277 Assembly1
    rna:72:1~2904 702,783~784,899,1407~1409,1418
    ,1428~1429,1473~1474,1483~1484
    ,1494~1495,1517
    rna:V2:5~68 693,1196,1397,1400~1403,1492~1
    493,1498,1534~1537
    rna:W:1~76 790,966,1229~1230,1338~1340,14
    00
    rna:Y2:1~76 530,1054,1493
    12891 8rcl:V2
    (3.49Å)
    		 64 N/A N/A N/A Escherichia
    coli
    562    		 38409277 Assembly1
    rna:A1:1~1542 6~15,17~18,20~28
    rna:A2:1~1537 40~44,47~48,51~55,57~58
    rna:W:1~76 50~53
    rna:W1:8~48 21~23
    rna:X2:1~77 48~49
    rna:Y1:8~48 24~26
    rna:Y2:1~76 54~57
    12892 8rcl:W
    (3.49Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS0000AE709C RF00005 Escherichia
    coli
    562    		 38409277 Assembly1
    rna:72:1~2904 11~12,74~76
    rna:A2:1~1537 30~31,34,38~41
    rna:V2:5~68 34~37
    12893 8rcl:W1
    (3.49Å)
    		 36 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000024E9F9 RF00005 Escherichia
    coli
    562    		 38409277 Assembly1
    rna:A1:1~1542 30~32,34,38~41
    rna:V2:5~68 34~37
    12894 8rcl:X2
    (3.49Å)
    		 77 GO:0030533 (F) triplet codon-amino aci... URS0002915713 RF00005 Escherichia
    coli
    562    		 38409277 Assembly1
    rna:72:1~2904 1,20,57,71~73,76~77
    rna:V2:5~68 36~37
    12895 8rcl:Y1
    (3.49Å)
    		 36 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00003179F7 RF00005 Escherichia
    coli
    562    		 38409277 Assembly1
    rna:71:1901~1930 37~38
    rna:A1:1~1542 34~37
    rna:V2:5~68 34~37
    12896 8rcl:Y2
    (3.49Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00001C39A4 RF00005 Escherichia
    coli
    562    		 38409277 Assembly1
    rna:72:1~2904 19,38,52~54,56,64,74~76
    rna:A2:1~1537 34~37
    rna:V2:5~68 34~37
    12897 8rcm:71
    (3.59Å)
    		 19 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0002915702 RF02541 Escherichia
    coli
    562    		 38409277 Assembly1
    rna:A1:1~1542 1912~1914,1916,1919~1920,1922
    rna:W1:8~48 1907~1908,1923
    12898 8rcm:72
    (3.59Å)
    		 2904 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0002915702 RF02541 Escherichia
    coli
    562    		 38409277 Assembly1
    rna:82:1~120 861,863,915~918
    rna:A2:1~1537 1700~1703,1832,1836~1837,1846,
    1848,1912~1916,1919~1920,1947~
    1948,1959~1960
    rna:W:1~76 1909,1923,2063~2064,2251~2253,
    2450~2451
    rna:X2:1~77 1851~1852,2112,2168,2394~2395,
    2421~2422,2432
    rna:Y2:1~76 896,1913,2470,2482,2507,2553~2
    555,2602
    12899 8rcm:82
    (3.59Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000049E57 RF00001 Escherichia
    coli
    562    		 38409277 Assembly1
    rna:72:1~2904 79~81,99~100
    12900 8rcm:A1
    (3.59Å)
    		 1542 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00000ABFE9 RF00177 Escherichia
    coli
    562    		 38409277 Assembly1
    rna:71:1906~1924 791,1407~1409,1494~1495,1517
    rna:V2:8~65 693,926,1196,1397,1400~1403,14
    93,1498,1505,1535~1540
    rna:W1:8~48 790,966,1229~1230,1338~1340,14
    00
    rna:Y1:8~48 530,955,1054,1493
    << < 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 > >>
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    Reference:
  • Chengxin Zhang, Lydia Freddolino (2024) "FURNA: a database for function annotations of RNA structures," PLOS Biology 22(7): e3002476.