SEQ2FUN

FURNA
Download all results in tab-seperated text for 16611 RNAs.
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  • Hover over Ligand to view the name of the ligand and the ligand-binding nucleotides on the RNA.

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    # PDB
    (Resolution)    		 Length EC number
    & GO term     		RNAcentral Rfam Taxon PubMed ATtRACT
    motif     		Ligand &
    binding nucleotides
    13201 8tsv:B
    (1.51Å)
    		 25 N/A URS0002915742 N/A Zika
    virus
    64320    		 38383158 Assembly1
    rna:A:1~25 1~6,8~25
    13202 8tsv:C
    (1.51Å)
    		 25 N/A URS0002915742 N/A Zika
    virus
    64320    		 38383158 Assembly2
    rna:D:1~25 1~6,8~25
    13203 8tsv:D
    (1.51Å)
    		 25 N/A URS0002915742 N/A Zika
    virus
    64320    		 38383158 Assembly2
    rna:C:1~25 1~6,8~25
    13204 8ub7:G
    (3.2Å)
    		 13 N/A URS00029EB384 N/A Bordetella
    phage
    BPP-1
    2885909    		 39779855 Assembly1
    rna:I:3~139 369~380
    13205 8ub7:H
    (3.2Å)
    		 13 N/A URS00029EB33D N/A Bordetella
    phage
    BPP-1
    2885909    		 39779855 Assembly1
    rna:I:3~139 118~128
    13206 8ub7:I
    (3.2Å)
    		 122 N/A URS00029EB372 RF03022 Bordetella
    phage
    BPP-1
    2885909    		 39779855 Assembly1
    rna:G:369~381 59~70,80~81
    rna:H:117~129 47~56
    13207 8ub8:G
    (3.28Å)
    		 14 N/A URS00029EB384 N/A Bordetella
    phage
    BPP-1
    2885909    		 39779855 Assembly1
    rna:I:3~139 369~381
    13208 8ub8:H
    (3.28Å)
    		 13 N/A URS00029EB33D N/A Bordetella
    phage
    BPP-1
    2885909    		 39779855 Assembly1
    rna:I:3~139 117~127
    13209 8ub8:I
    (3.28Å)
    		 116 N/A URS00029EB372 RF03022 Bordetella
    phage
    BPP-1
    2885909    		 39779855 Assembly1
    rna:G:369~382 58~70,80~81
    rna:H:117~129 47~57
    13210 8ub9:G
    (3.07Å)
    		 13 N/A URS00029EB384 N/A Bordetella
    phage
    BPP-1
    2885909    		 39779855 Assembly1
    rna:I:3~139 369~380
    13211 8ub9:H
    (3.07Å)
    		 13 N/A URS00029EB36D N/A Bordetella
    phage
    BPP-1
    2885909    		 39779855 Assembly1
    rna:I:3~139 118~128
    13212 8ub9:I
    (3.07Å)
    		 122 N/A URS00029EB372 RF03022 Bordetella
    phage
    BPP-1
    2885909    		 39779855 Assembly1
    rna:G:369~381 59~70,80~82
    rna:H:117~129 47~56
    13213 8uba:G
    (3.2Å)
    		 14 N/A URS00029EB384 N/A Bordetella
    phage
    BPP-1
    2885909    		 39779855 Assembly1
    rna:I:3~139 369~381
    13214 8uba:H
    (3.2Å)
    		 13 N/A URS00029EB36D N/A Bordetella
    phage
    BPP-1
    2885909    		 39779855 Assembly1
    rna:I:3~139 117~127
    13215 8uba:I
    (3.2Å)
    		 116 N/A URS00029EB372 RF03022 Bordetella
    phage
    BPP-1
    2885909    		 39779855 Assembly1
    rna:G:369~382 58~70,80~81
    rna:H:117~129 47~57
    13216 8ubb:G
    (3.23Å)
    		 13 N/A URS00029EB384 N/A Bordetella
    phage
    BPP-1
    2885909    		 39779855 Assembly1
    rna:I:3~139 369~380
    13217 8ubb:H
    (3.23Å)
    		 13 N/A URS00029EB33B N/A Bordetella
    phage
    BPP-1
    2885909    		 39779855 Assembly1
    rna:I:3~139 118~128
    13218 8ubb:I
    (3.23Å)
    		 122 N/A URS00029EB372 RF03022 Bordetella
    phage
    BPP-1
    2885909    		 39779855 Assembly1
    rna:G:369~381 59~70,80~82
    rna:H:117~129 47~56
    13219 8ubc:I
    (3.29Å)
    		 86 N/A URS00029EB372 RF03022 Bordetella
    phage
    BPP-1
    2885909    		 39779855 Assembly1
    rna:H:123~129 47~52
    13220 8ubd:G
    (3.05Å)
    		 13 N/A URS00029EB384 N/A Bordetella
    phage
    BPP-1
    2885909    		 39779855 Assembly1
    rna:I:3~139 369~372,374~380
    13221 8ubd:H
    (3.05Å)
    		 13 N/A URS00029EB36D N/A Bordetella
    phage
    BPP-1
    2885909    		 39779855 Assembly1
    rna:I:3~139 117~119,121~128
    13222 8ubd:I
    (3.05Å)
    		 123 N/A URS00029EB372 RF03022 Bordetella
    phage
    BPP-1
    2885909    		 39779855 Assembly1
    rna:G:369~381 59~70,80~82
    rna:H:117~129 47~57
    13223 8ube:G
    (3.05Å)
    		 11 N/A URS00029EB384 N/A Bordetella
    phage
    BPP-1
    2885909    		 39779855 Assembly1
    rna:I:1~139 371~381
    13224 8ube:H
    (3.05Å)
    		 17 N/A URS00029EB36D N/A Bordetella
    phage
    BPP-1
    2885909    		 39779855 Assembly1
    rna:I:1~139 118~134
    13225 8ube:I
    (3.05Å)
    		 139 N/A URS00029EB372 RF03022 Bordetella
    phage
    BPP-1
    2885909    		 39779855 Assembly1
    rna:G:371~381 58~61,63~69,81~83
    rna:H:118~134 1,41~56,83,87~88,92
    13226 8ubf:H
    (3.61Å)
    		 10 N/A URS00029EB33B N/A Bordetella
    phage
    BPP-1
    2885909    		 39779855 Assembly1
    rna:I:3~139 118~126
    13227 8ubf:I
    (3.61Å)
    		 92 N/A URS00029EB372 RF03022 Bordetella
    phage
    BPP-1
    2885909    		 39779855 Assembly1
    rna:H:117~126 49~56
    13228 8ud3:G
    (2.67Å)
    		 17 N/A URS0002915712 N/A Severe
    acute
    respiratory
    syndrome
    coronavirus
    2
    2697049    		 38613382 Assembly1
    rna:H:1~17 1~6,8~17
    13229 8ud3:H
    (2.67Å)
    		 17 N/A URS000291573F N/A Severe
    acute
    respiratory
    syndrome
    coronavirus
    2
    2697049    		 38613382 Assembly1
    rna:G:1~17 1~10,12~17
    13230 8ud4:G
    (3.25Å)
    		 23 N/A URS0002915712 N/A Severe
    acute
    respiratory
    syndrome
    coronavirus
    2
    2697049    		 38613382 Assembly1
    rna:H:1~23 1~8,10~23
    13231 8ud4:H
    (3.25Å)
    		 23 N/A URS000291573F N/A Severe
    acute
    respiratory
    syndrome
    coronavirus
    2
    2697049    		 38613382 Assembly1
    rna:G:1~23 1~14,16~23
    13232 8ud5:G
    (3.13Å)
    		 27 N/A URS0002915712 N/A Severe
    acute
    respiratory
    syndrome
    coronavirus
    2
    2697049    		 38613382 Assembly1
    rna:H:4~30 1~16,18~27
    13233 8ud5:H
    (3.13Å)
    		 27 N/A URS000291573F N/A Severe
    acute
    respiratory
    syndrome
    coronavirus
    2
    2697049    		 38613382 Assembly1
    rna:G:1~27 4~13,15~30
    13234 8ud6:1A
    (2.7Å)
    		 2871 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001698E8 RF02541 Thermus
    thermophilus
    HB8
    300852    		 38359125 Assembly1
    rna:1B:1~120 861~864,915,917~919,958
    rna:1a:4~1533 1689,1700~1704,1832,1836~1837,
    1846,1848,1912~1916,1919~1920,
    1947~1949,1959~1961,2863~2864
    rna:1w:1~74 882,896~897,1913,2483,2554
    rna:1x:2~76 1907~1909,1922~1924,2061,2063~
    2064,2251~2253,2255,2439,2450~
    2451,2585~2586,2602
    rna:1y:1~76 1851,2112,2169,2394~2395,2421~
    2422
    13235 8ud6:1B
    (2.7Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DEE8 RF00001 Thermus
    thermophilus
    HB8
    300852    		 38359125 Assembly1
    rna:1A:6~2897 78~81,90,97~98,100~102
    13236 8ud6:1a
    (2.7Å)
    		 1500 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DFED RF00177 Thermus
    thermophilus
    HB8
    300852    		 38359125 Assembly1
    rna:1A:6~2897 702,783~784,899~900,1407~1409,
    1418,1429,1442A,1473~1475,1483
    ~1484,1494~1496,1517
    rna:1v:12~24 530,926,1196,1397,1400~1401,14
    92~1493,1498,1503,1505,1507
    rna:1w:1~74 530,1054,1493
    rna:1x:2~76 790,966,1229~1230,1338~1340,14
    00
    13237 8ud6:1v
    (2.7Å)
    		 13 N/A N/A N/A Tequatrovirus
    T4
    10665    		 38359125 Assembly1
    rna:1a:4~1533 12~13,15~24
    rna:1w:1~74 19~21
    rna:1x:2~76 16~18
    13238 8ud6:1w
    (2.7Å)
    		 72 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    562    		 38359125 Assembly1
    rna:1A:6~2897 19,37~38,55~56,64,74
    rna:1a:4~1533 34~37
    rna:1v:12~24 34~37
    13239 8ud6:1x
    (2.7Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    562    		 38359125 Assembly1
    rna:1A:6~2897 2~3,11~13,24~25,74~76
    rna:1a:4~1533 30~32,34,38~41
    rna:1v:12~24 34~37
    13240 8ud6:1y
    (2.7Å)
    		 74 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    562    		 38359125 Assembly1
    rna:1A:6~2897 19,56,71~72,76
    13241 8ud6:2A
    (2.7Å)
    		 2800 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001698E8 RF02541 Thermus
    thermophilus
    HB8
    300852    		 38359125 Assembly1
    rna:2B:1~120 861~864,915,917~919,958
    rna:2a:4~1532 1700~1704,1832,1836~1837,1846,
    1848,1912~1916,1919~1920,1947~
    1949,1959~1961,2864
    rna:2w:2~74 897,1913,2483,2554~2555
    rna:2x:2~76 1907~1909,1922~1924,2061,2063~
    2064,2251~2253,2255,2439,2450~
    2451,2585~2586,2601~2602
    rna:2y:1~76 1851,2112,2169,2394~2395,2421~
    2422,2432
    13242 8ud6:2B
    (2.7Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DEE8 RF00001 Thermus
    thermophilus
    HB8
    300852    		 38359125 Assembly1
    rna:2A:6~2897 78~81,90,97~98,100~102
    13243 8ud6:2a
    (2.7Å)
    		 1503 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DFED RF00177 Thermus
    thermophilus
    HB8
    300852    		 38359125 Assembly1
    rna:2A:6~2897 702,783~784,899~900,1407~1409,
    1418,1429,1442A,1473~1474,1483
    ~1484,1493~1496,1517
    rna:2v:12~24 530,926,1196,1397,1400~1402,14
    92~1493,1498,1503~1505,1507
    rna:2w:2~74 530,1054,1493
    rna:2x:2~76 790,966,1229~1230,1338~1340,14
    00
    13244 8ud6:2v
    (2.7Å)
    		 13 N/A N/A N/A Tequatrovirus
    T4
    10665    		 38359125 Assembly1
    rna:2a:4~1532 12~13,15~24
    rna:2w:2~74 19~21
    rna:2x:2~76 16~18
    13245 8ud6:2w
    (2.7Å)
    		 70 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    562    		 38359125 Assembly1
    rna:2A:6~2897 37~38,55~56,64,74
    rna:2a:4~1532 34~37
    rna:2v:12~24 34~37
    13246 8ud6:2x
    (2.7Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    562    		 38359125 Assembly1
    rna:2A:6~2897 2~3,11~13,24~25,74~76
    rna:2a:4~1532 30~31,34,38,40~41
    rna:2v:12~24 34~37
    13247 8ud6:2y
    (2.7Å)
    		 73 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    562    		 38359125 Assembly1
    rna:2A:6~2897 19,56,71~72,76
    13248 8ud7:1A
    (2.55Å)
    		 2871 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001698E8 RF02541 Thermus
    thermophilus
    HB8
    300852    		 38359125 Assembly1
    rna:1B:1~120 861~864,915,917~919,958
    rna:1a:4~1533 1689,1700~1704,1832,1836~1837,
    1846,1848,1912~1916,1919~1920,
    1947~1949,1959~1961,2863~2864
    rna:1w:1~74 882~883,896~897,1913,2483,2554
    rna:1x:2~76 1907~1909,1922~1924,2061,2063~
    2064,2251~2253,2255,2439,2450~
    2451,2585,2601~2602
    rna:1y:1~76 1851,2112,2169,2394~2395,2421~
    2422
    13249 8ud7:1B
    (2.55Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DEE8 RF00001 Thermus
    thermophilus
    HB8
    300852    		 38359125 Assembly1
    rna:1A:6~2897 78~81,90,97~98,100~102
    13250 8ud7:1a
    (2.55Å)
    		 1500 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DFED RF00177 Thermus
    thermophilus
    HB8
    300852    		 38359125 Assembly1
    rna:1A:6~2897 702,783~784,899~900,1407~1409,
    1418,1429,1442A,1473~1475,1483
    ~1484,1494~1496,1517
    rna:1v:12~24 530,926,1196,1397,1400~1402,14
    92~1493,1498,1503,1505,1507
    rna:1w:1~74 530,1054,1493
    rna:1x:2~76 790,966,1229~1230,1338~1340,14
    00
    13251 8ud7:1v
    (2.55Å)
    		 13 N/A N/A N/A Tequatrovirus
    T4
    10665    		 38359125 Assembly1
    rna:1a:4~1533 12~13,15~24
    rna:1w:1~74 19~21
    rna:1x:2~76 16~18
    13252 8ud7:1w
    (2.55Å)
    		 72 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    562    		 38359125 Assembly1
    rna:1A:6~2897 19,37~38,55~56,64,74
    rna:1a:4~1533 34~37
    rna:1v:12~24 34~37
    13253 8ud7:1x
    (2.55Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    562    		 38359125 Assembly1
    rna:1A:6~2897 3,11~13,24~25,74~76
    rna:1a:4~1533 29~32,34,38~41
    rna:1v:12~24 34~37
    13254 8ud7:1y
    (2.55Å)
    		 74 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    562    		 38359125 Assembly1
    rna:1A:6~2897 19,56,71~72,76
    13255 8ud7:2A
    (2.55Å)
    		 2800 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001698E8 RF02541 Thermus
    thermophilus
    HB8
    300852    		 38359125 Assembly1
    rna:2B:1~120 861~864,915,917~919,958
    rna:2a:4~1532 1700~1704,1832,1836~1837,1846,
    1848,1912~1916,1919~1920,1947~
    1949,1959~1961,2863~2864
    rna:2w:2~73 896~897,1913,2483
    rna:2x:2~76 1907~1909,1922~1924,2061,2063~
    2064,2251~2253,2255,2439,2450~
    2451,2585,2601~2602
    rna:2y:1~76 1851,2112,2169,2394~2395,2421~
    2422
    13256 8ud7:2B
    (2.55Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DEE8 RF00001 Thermus
    thermophilus
    HB8
    300852    		 38359125 Assembly1
    rna:2A:6~2897 78~81,90,97~98,100~102
    13257 8ud7:2a
    (2.55Å)
    		 1503 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DFED RF00177 Thermus
    thermophilus
    HB8
    300852    		 38359125 Assembly1
    rna:2A:6~2897 702,783~784,899,1407~1409,1418
    ,1429~1430,1442A,1473~1475,148
    3~1484,1494~1496,1517
    rna:2v:12~24 530,926,1196,1397,1400~1402,14
    92~1493,1498,1503,1505,1507
    rna:2w:2~73 530,1054,1493
    rna:2x:2~76 790,966,1229~1230,1338~1340,14
    00
    13258 8ud7:2v
    (2.55Å)
    		 13 N/A N/A N/A Tequatrovirus
    T4
    10665    		 38359125 Assembly1
    rna:2a:4~1532 12~13,15~24
    rna:2w:2~73 19~21
    rna:2x:2~76 16~18
    13259 8ud7:2w
    (2.55Å)
    		 69 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    562    		 38359125 Assembly1
    rna:2A:6~2897 37~38,55~56,64
    rna:2a:4~1532 34~37
    rna:2v:12~24 34~37
    13260 8ud7:2x
    (2.55Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    562    		 38359125 Assembly1
    rna:2A:6~2897 2,11~13,24~25,74~76
    rna:2a:4~1532 30~31,34,38,40~41
    rna:2v:12~24 34~37
    13261 8ud7:2y
    (2.55Å)
    		 73 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    562    		 38359125 Assembly1
    rna:2A:6~2897 19,56,71~72,76
    13262 8ud8:1A
    (2.6Å)
    		 2871 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001698E8 RF02541 Thermus
    thermophilus
    HB8
    300852    		 38359125 Assembly1
    rna:1B:1~120 861~864,915,917~919,958
    rna:1a:4~1533 1689,1700,1702~1704,1832,1836~
    1837,1846,1848,1912~1916,1919~
    1920,1947~1948,1959~1961,2863~
    2864
    rna:1w:1~76 882,897,1913,2483,2506~2507,25
    53~2555,2573,2583~2585,2602
    rna:1x:2~76 1907~1909,1922~1924,2063~2064,
    2251~2253,2439,2450~2451,2585~
    2586,2601~2602
    rna:1y:1~76 1851,2112,2169,2394~2395,2421~
    2422
    13263 8ud8:1B
    (2.6Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DEE8 RF00001 Thermus
    thermophilus
    HB8
    300852    		 38359125 Assembly1
    rna:1A:6~2897 78~81,90,97~98,100~102
    13264 8ud8:1a
    (2.6Å)
    		 1500 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DFED RF00177 Thermus
    thermophilus
    HB8
    300852    		 38359125 Assembly1
    rna:1A:6~2897 702,783~784,899~900,1407~1409,
    1418,1429,1442A,1473~1475,1483
    ~1484,1494~1496,1517
    rna:1v:12~24 926,1196,1397,1400~1401,1492~1
    493,1498,1503,1505,1507
    rna:1w:1~76 530,1054,1493
    rna:1x:2~76 790,966,1229~1230,1338~1341,14
    00
    13265 8ud8:1v
    (2.6Å)
    		 13 N/A N/A N/A Tequatrovirus
    T4
    10665    		 38359125 Assembly1
    rna:1a:4~1533 12~13,15~20,22~24
    rna:1w:1~76 19~21
    rna:1x:2~76 16~18
    13266 8ud8:1w
    (2.6Å)
    		 74 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    562    		 38359125 Assembly1
    rna:1A:6~2897 19,37~38,56,64,74~76
    rna:1a:4~1533 34~37
    rna:1v:12~24 34~37
    13267 8ud8:1x
    (2.6Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    562    		 38359125 Assembly1
    rna:1A:6~2897 11~13,24~25,74~76
    rna:1a:4~1533 29~32,34,38,40~41
    rna:1v:12~24 34~37
    13268 8ud8:1y
    (2.6Å)
    		 74 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    562    		 38359125 Assembly1
    rna:1A:6~2897 19,56,71~72,76
    13269 8ud8:2A
    (2.6Å)
    		 2800 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001698E8 RF02541 Thermus
    thermophilus
    HB8
    300852    		 38359125 Assembly1
    rna:2B:1~120 861~864,915,917~919,958
    rna:2a:4~1532 1689,1700~1704,1832,1836~1837,
    1846,1848,1912~1913,1915~1916,
    1919~1920,1947~1948,1959~1961,
    2864
    rna:2w:2~76 897,1913,2482~2483,2506~2507,2
    553~2555,2583~2585,2602
    rna:2x:2~76 1907~1909,1922~1924,2061,2063~
    2064,2251~2252,2439,2450~2451,
    2585~2586,2601~2602
    rna:2y:1~76 1851,2112,2169,2394~2395,2421~
    2422
    13270 8ud8:2B
    (2.6Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DEE8 RF00001 Thermus
    thermophilus
    HB8
    300852    		 38359125 Assembly1
    rna:2A:6~2897 78~81,90,97~98,100~102
    13271 8ud8:2a
    (2.6Å)
    		 1503 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DFED RF00177 Thermus
    thermophilus
    HB8
    300852    		 38359125 Assembly1
    rna:2A:6~2897 702,783~784,899~900,1407~1409,
    1418,1429,1442A,1473~1475,1483
    ~1484,1493~1496,1517
    rna:2v:12~24 530,926,1196,1397,1400~1402,14
    92~1493,1498,1503,1505,1507
    rna:2w:2~76 530,1054,1493
    rna:2x:2~76 790,966,1229~1230,1338~1340,14
    00
    13272 8ud8:2v
    (2.6Å)
    		 13 N/A N/A N/A Tequatrovirus
    T4
    10665    		 38359125 Assembly1
    rna:2a:4~1532 12~13,15~24
    rna:2w:2~76 19~21
    rna:2x:2~76 16~18
    13273 8ud8:2w
    (2.6Å)
    		 72 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    562    		 38359125 Assembly1
    rna:2A:6~2897 37~38,55~56,64,74~76
    rna:2a:4~1532 34~37
    rna:2v:12~24 34~37
    13274 8ud8:2x
    (2.6Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    562    		 38359125 Assembly1
    rna:2A:6~2897 11~13,24~25,74~76
    rna:2a:4~1532 29~32,34,38~41
    rna:2v:12~24 34~37
    13275 8ud8:2y
    (2.6Å)
    		 73 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    562    		 38359125 Assembly1
    rna:2A:6~2897 19,56,71~72,76
    13276 8uik:L5
    (2.96Å)
    		 3649 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02543 Homo
    sapiens
    9606    		 N/A
    M054_0.6

    1306

    769

    706

    1303

    762

    42

    1148

    1149

    764

    870

    167

    21

    1079

    930

    1029

    1075

    1072

    1073

    s77

    1071

    819

    1373

    938

    546

    s52

    s51

    s50

    931

    813

    936

    s59

    995

    994

    595

    1314

    991

    1312

    1311

    1028

    1150

    673

    123

    124

    125

    1068

    s72

    1060

    s100

    s102

    52

    533

    M227_0.6

    1384

    375

    926

    822

    1128

    988

    1321

    708

    704

    705

    1328

    707

    1124

    987

    1126

    703

    M077_0.6

    1237

    83

    1181

    797

    796

    795

    836

    837

    791

    790

    838

    1334

    s70

    1016

    1017

    1393

    610

    1012

    1013

    1236

    M290_0.6

    763

    1231

    1232

    1233

    1335

    s17

    M109_0.6

    1336

    1331

    1239

    1333

    589

    776

    M273_0.6

    s99

    1389

    902

    821

    900

    901

    906

    905

    33

    s48

    853

    924

    M044_0.6

    1245

    s62

    s96

    1227

    883

    M035_0.6

    1223

    M156_0.6

    604

    M320_0.6

    1347

    60

    s81

    M349_0.6

    1083

    1026

    100

    s61

    977

    976

    974

    852

    970

    M154_0.6

    884

    s55

    979

    M153_0.6

    183

    1238

    185

    1375

    1036

    503

    1034

    1035

    1212

    M102_0.6

    1211

    1216

    1042

    986

    467

    M148_0.6

    1354

    M103_0.6

    169

    91

    1127

    162

    M070_0.6

    M272_0.6

    M020_0.6

    M050_0.6

    1187

    1182

    815

    1037

    727

    M347_0.6

    722

    935

    M086_0.6

    1164

    1165

    1166

    606

    886

    156

    748

    749

    608

    M061_0.6

    958

    1055

    878

    879

    1059

    953

    952

    872

    954

    957

    1107

    1352

    774

    1215

    M104_0.6

    1173

    770

    773

    1183

    1271

    1272

    1273

    779

    778

    1178

    M151_0.6

    78

    1285

    M083_0.6

    1041

    1040

    1043

    1045

    1044

    1288

    354

    688

    1360

    684

    800

    1368    		 Assembly1
    rna:L7:1~120 1736~1739,1741,1792~1796,1894,
    1909,1936,1942
    rna:L8:1~156 2~22,58,146,339,341~348,350~35
    3,355~357,360,362,379~380,415~
    430,1304~1305,1333~1334,1371,2
    308~2309,2312~2313,2333~2334,2
    355,2444,2472,2488,2493~2494,2
    508,2510,2544,2778~2780,3890
    rna:S2:1~1869 1563,1565,2867,2884~2885,3628~
    3629,3711,3759~3760,3766~3768,
    3794~3796,3806~3807
    13277 8uik:L7
    (2.96Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00001 Homo
    sapiens
    9606    		 N/A
    931

    1290

    s51

    879    		 Assembly1
    rna:L5:1~5069 77~80,84,88,98,100~103
    13278 8uik:L8
    (2.96Å)
    		 156 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00002 Homo
    sapiens
    9606    		 N/A
    1227

    592

    s24

    993

    1215

    1352

    s37

    1238

    1178

    M085_0.6

    1389

    1360

    589

    375

    M106_0.6    		 Assembly1
    rna:L5:1~5069 3~22,24~37,40~41,53~54,103,108
    ,110~113,115,124~127,136~149,1
    51~156
    13279 8uik:S2
    (2.96Å)
    		 1740 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF01960 Homo
    sapiens
    9606    		 N/A
    1303

    1263

    872

    1149

    1267

    764

    43

    957

    692

    1079

    1075

    1072

    1073

    819

    346

    546

    1378

    930

    936

    935

    M296_0.6

    1314

    M141_0.6

    1068

    s72

    M147_0.6

    1060

    s102

    1384

    1386

    M016_0.6

    s48

    926

    822

    1128

    1323

    988

    595

    1327

    707

    986

    796

    836

    762

    790

    838

    1124

    1017

    1393

    1392

    1390

    1236

    1335

    1334

    M109_0.6

    1238

    M273_0.6

    s14

    s96

    s99

    1311

    105

    902

    821

    900

    905

    1380

    788

    445

    924

    1244

    s62

    s61

    M074_0.6

    335

    60

    1167

    977

    976

    974

    852

    970

    1333

    509

    1037

    1035

    1213

    756

    639

    M148_0.6

    786

    1355

    M065_0.6

    93

    167

    M070_0.6

    813

    M050_0.6

    1188

    1022

    1187

    1029

    815

    727

    722

    883

    604

    606

    884

    749

    779

    608

    996

    M037_0.6

    1055

    878

    1059

    952

    1195

    954

    870

    325

    758

    770

    610

    1274

    1042

    M127_0.6

    s24

    804    		 Assembly1
    rna:L5:1~5069 368,677~678,970,1029,1059,1708
    ,1719~1721,1731,1815~1816,1826
    ~1827,1849
    13280 8ukb:L5
    (3.05Å)
    		 3740 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0002F10444 RF02543 Homo
    sapiens
    9606    		 N/A
    M054_0.6

    1306

    769

    706

    1303

    762

    42

    1148

    1149

    764

    870

    167

    21

    1079

    930

    1029

    1075

    1072

    1073

    s77

    1071

    819

    1373

    938

    546

    s52

    s51

    s50

    931

    813

    936

    s59

    995

    994

    595

    1314

    991

    1312

    1311

    1028

    1150

    673

    123

    124

    125

    1068

    s72

    1060

    s100

    s102

    52

    533

    M227_0.6

    1384

    375

    926

    822

    1128

    988

    1321

    708

    704

    705

    1328

    707

    1124

    987

    1126

    703

    M077_0.6

    1237

    83

    1181

    797

    796

    795

    836

    837

    791

    790

    838

    1334

    s70

    1016

    1017

    1393

    610

    1012

    1013

    1236

    M290_0.6

    763

    1231

    1232

    1233

    1335

    s17

    M109_0.6

    1336

    1331

    1239

    1333

    589

    776

    M273_0.6

    s99

    1389

    902

    821

    900

    901

    906

    905

    33

    s48

    853

    924

    M044_0.6

    1245

    s62

    s96

    1227

    883

    M035_0.6

    1223

    M156_0.6

    604

    M320_0.6

    1347

    60

    s81

    M349_0.6

    1083

    175

    1026

    100

    s61

    977

    976

    974

    852

    970

    M154_0.6

    884

    s55

    979

    M153_0.6

    183

    1238

    185

    1375

    1036

    503

    1034

    1035

    1212

    M102_0.6

    1211

    1216

    1042

    986

    467

    M148_0.6

    1354

    M103_0.6

    169

    91

    1127

    162

    M070_0.6

    M272_0.6

    M020_0.6

    M050_0.6

    1187

    1182

    815

    1037

    727

    M347_0.6

    722

    935

    M086_0.6

    1164

    1165

    1166

    606

    886

    156

    748

    749

    608

    M061_0.6

    958

    1055

    878

    879

    1059

    953

    952

    872

    954

    957

    1107

    1352

    774

    1215

    M104_0.6

    1173

    770

    773

    1183

    1271

    1272

    1273

    779

    778

    1178

    M151_0.6

    78

    1285

    M083_0.6

    1041

    1040

    1043

    1045

    1044

    1288

    354

    688

    1360

    684

    800

    1368    		 Assembly1
    rna:L7:1~120 1736~1739,1741,1792,1794~1796,
    1894,1909,1936,1942
    rna:L8:1~156 2~22,58,146,339,341~348,350~35
    3,355~357,360,362,379~380,415~
    430,1304~1305,1333~1334,1371,2
    308~2309,2312~2313,2333~2334,2
    355,2443~2444,2472,2493,2508,2
    510,2542,2544,2778~2779
    rna:S2:1~1869 1563~1565,2884,3628~3629,3709~
    3711,3759~3760,3762~3763,3766~
    3767,3794~3796,3806~3807
    13281 8ukb:L7
    (3.05Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000002B0D5 RF00001 Homo
    sapiens
    9606    		 N/A
    931

    1290

    s51

    879    		 Assembly1
    rna:L5:1~5069 77~80,84,88,98,100~103
    13282 8ukb:L8
    (3.05Å)
    		 156 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B2C76 RF00002 Homo
    sapiens
    9606    		 N/A
    1227

    592

    s24

    993

    1215

    1352

    s37

    1238

    1178

    M085_0.6

    1389

    1360

    589

    375

    M106_0.6    		 Assembly1
    rna:L5:1~5069 4~22,24~37,40~41,53~54,103,108
    ,110~113,115,124,126~128,136~1
    49,151~156
    13283 8ukb:S2
    (3.05Å)
    		 1740 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0002F10456 RF01960 Homo
    sapiens
    9606    		 N/A
    1303

    1263

    872

    1149

    1267

    764

    43

    957

    692

    1079

    1075

    1072

    1073

    819

    346

    546

    1378

    930

    936

    935

    M296_0.6

    1314

    M141_0.6

    1068

    s72

    M147_0.6

    1060

    s102

    1384

    1386

    M016_0.6

    s48

    926

    822

    1128

    1323

    988

    595

    1327

    707

    986

    796

    836

    762

    790

    838

    1124

    1017

    1393

    1392

    1390

    1236

    1335

    1334

    M109_0.6

    1238

    M273_0.6

    s14

    s96

    s99

    1311

    105

    902

    821

    900

    905

    1380

    788

    445

    924

    1244

    s62

    s61

    M074_0.6

    335

    60

    1167

    977

    976

    974

    852

    970

    1333

    509

    1037

    1035

    1213

    756

    639

    M148_0.6

    786

    1355

    M065_0.6

    93

    167

    M070_0.6

    813

    M050_0.6

    1188

    1022

    1187

    1029

    815

    727

    722

    883

    604

    606

    884

    749

    779

    608

    996

    M037_0.6

    1055

    878

    1059

    952

    1195

    954

    870

    325

    758

    770

    610

    1274

    1042

    M127_0.6

    s24

    804    		 Assembly1
    rna:L5:1~5069 677,970,1028~1030,1708~1710,17
    19~1721,1731,1815~1816,1826~18
    28,1849
    13284 8upo:7
    (5.5Å)
    		 28 N/A N/A N/A synthetic
    construct
    32630    		 39117885 Assembly1
    rna:B:1~76 1~2
    rna:D:1~1534 2~6,8~9
    13285 8upo:A
    (5.5Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080DFF5 RF00005 Escherichia
    coli
    562    		 39117885 Assembly1
    rna:a:1~2903 16~17,19,56,71~72,76
    13286 8upo:B
    (5.5Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080DFF5 RF00005 Escherichia
    coli
    562    		 39117885 Assembly1
    rna:7:1~37 35,37
    rna:D:1~1534 30~32,37~38
    rna:a:1~2903 2,13,24,75~76
    13287 8upo:D
    (5.5Å)
    		 1524 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00000ABFE9 RF00177 Escherichia
    coli
    562    		 39117885 Assembly1
    rna:7:1~37 926,1196,1395,1397,1401,1403,1
    493,1499~1501,1505
    rna:B:1~76 790,1229~1230,1339~1341
    rna:a:1~2903 1408~1409,1475,1492,1494,1517
    13288 8upo:a
    (5.5Å)
    		 2880 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000B21DEA RF02541 Escherichia
    coli
    562    		 39117885 Assembly1
    rna:A:1~76 1851~1852,2111~2112,2168,2180~
    2181,2394~2395,2421~2422
    rna:B:1~76 1907,1922~1923,2255,2493~2494,
    2602
    rna:D:1~1534 1689,1912~1913,1916,1920
    rna:d:1~120 861~864,915,917~919,958,2340
    13289 8upo:d
    (5.5Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000049E57 RF00001 Escherichia
    coli
    562    		 39117885 Assembly1
    rna:a:1~2903 41,78~81,89~90,96~97,99~101
    13290 8upr:7
    (5.3Å)
    		 38 N/A N/A N/A synthetic
    construct
    32630    		 39117885 Assembly1
    rna:B:1~76 1~2
    rna:D:1~1534 2~6,8~9
    13291 8upr:A
    (5.3Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080DFF5 RF00005 Escherichia
    coli
    562    		 39117885 Assembly1
    rna:a:1~2903 16~17,19,56,71~72,76
    13292 8upr:B
    (5.3Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080DFF5 RF00005 Escherichia
    coli
    562    		 39117885 Assembly1
    rna:7:1~38 35,37
    rna:D:1~1534 30~32,37~38
    rna:a:1~2903 2,13,24,75~76
    13293 8upr:D
    (5.3Å)
    		 1524 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00000ABFE9 RF00177 Escherichia
    coli
    562    		 39117885 Assembly1
    rna:7:1~38 926,1196,1395,1397,1401,1403,1
    493,1499~1501,1505
    rna:B:1~76 790,1339~1341
    rna:a:1~2903 1408~1409,1475,1492,1494,1517
    13294 8upr:a
    (5.3Å)
    		 2880 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000B21DEA RF02541 Escherichia
    coli
    562    		 39117885 Assembly1
    rna:A:1~76 1851~1852,2111~2112,2168,2180~
    2181,2394~2395,2421~2422
    rna:B:1~76 1907,1922~1923,2255,2493~2494,
    2602
    rna:D:1~1534 1689,1912~1913,1916,1920
    rna:d:1~120 861~864,915,917~919,958,2340
    13295 8upr:d
    (5.3Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000049E57 RF00001 Escherichia
    coli
    562    		 39117885 Assembly1
    rna:a:1~2903 41,78~81,89~90,96~97,99~101
    13296 8uql:7
    (3.2Å)
    		 37 N/A N/A N/A synthetic
    construct
    32630    		 39117885 Assembly1
    rna:B:1~76 1~2
    rna:D:1~1534 2~6,8~9
    13297 8uql:A
    (3.2Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080DFF5 RF00005 Escherichia
    coli
    562    		 39117885 Assembly1
    rna:a:1~2903 16~17,19,56,71~72,76
    13298 8uql:B
    (3.2Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080DFF5 RF00005 Escherichia
    coli
    562    		 39117885 Assembly1
    rna:7:1~41 35,37
    rna:D:1~1534 30~32,37~38
    rna:a:1~2903 2,13,24,75~76
    13299 8uql:D
    (3.2Å)
    		 1524 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00000ABFE9 RF00177 Escherichia
    coli
    562    		 39117885 Assembly1
    rna:7:1~41 926,1196,1395,1397,1401,1403,1
    493,1499~1501,1505
    rna:B:1~76 790,1339~1341
    rna:a:1~2903 1408~1409,1475,1492,1494,1517
    13300 8uql:a
    (3.2Å)
    		 2880 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000B21DEA RF02541 Escherichia
    coli
    562    		 39117885 Assembly1
    rna:A:1~76 1851~1852,2111~2112,2168,2180~
    2181,2394~2395,2421~2422
    rna:B:1~76 1907,1922~1923,2255,2493~2494,
    2602
    rna:D:1~1534 1689,1912~1913,1916,1920
    rna:d:1~120 861~864,915,917~919,958,2340
    << < 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 > >>
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    Reference:
  • Chengxin Zhang, Lydia Freddolino (2024) "FURNA: a database for function annotations of RNA structures," PLOS Biology 22(7): e3002476.