SEQ2FUN

FURNA
Download all results in tab-seperated text for 16611 RNAs.
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  • Hover over Ligand to view the name of the ligand and the ligand-binding nucleotides on the RNA.

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    # PDB
    (Resolution)    		 Length EC number
    & GO term     		RNAcentral Rfam Taxon PubMed ATtRACT
    motif     		Ligand &
    binding nucleotides
    13301 8uql:d
    (3.2Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000049E57 RF00001 Escherichia
    coli
    562    		 39117885 Assembly1
    rna:a:1~2903 41,78~81,89~90,96~97,99~101
    13302 8uqm:7
    (5.3Å)
    		 37 N/A N/A N/A synthetic
    construct
    32630    		 39117885 Assembly1
    rna:B:1~76 1~2
    rna:D:1~1534 2~6,8~9
    13303 8uqm:A
    (5.3Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080DFF5 RF00005 Escherichia
    coli
    562    		 39117885 Assembly1
    rna:a:1~2903 16~17,19,56,71~72,76
    13304 8uqm:B
    (5.3Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080DFF5 RF00005 Escherichia
    coli
    562    		 39117885 Assembly1
    rna:7:1~41 35,37
    rna:D:1~1534 30~32,37~38
    rna:a:1~2903 2,13,24,75~76
    13305 8uqm:D
    (5.3Å)
    		 1524 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00000ABFE9 RF00177 Escherichia
    coli
    562    		 39117885 Assembly1
    rna:7:1~41 926,1196,1395,1397,1401,1403,1
    493,1499~1501,1505
    rna:B:1~76 790,1339~1341
    rna:a:1~2903 1408~1409,1475,1492,1494,1517
    13306 8uqm:a
    (5.3Å)
    		 2880 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000B21DEA RF02541 Escherichia
    coli
    562    		 39117885 Assembly1
    rna:A:1~76 1851~1852,2111~2112,2168,2180~
    2181,2394~2395,2421~2422
    rna:B:1~76 1907,1922~1923,2255,2493~2494,
    2602
    rna:D:1~1534 1689,1912~1913,1916,1920
    rna:d:1~120 861~864,915,917~919,958,2340
    13307 8uqm:d
    (5.3Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000049E57 RF00001 Escherichia
    coli
    562    		 39117885 Assembly1
    rna:a:1~2903 41,78~81,89~90,96~97,99~101
    13308 8uqp:7
    (3.8Å)
    		 37 N/A N/A N/A synthetic
    construct
    32630    		 39117885 Assembly1
    rna:B:1~76 1~2
    rna:D:1~1534 2~6,8~9
    13309 8uqp:A
    (3.8Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080DFF5 RF00005 Escherichia
    coli
    562    		 39117885 Assembly1
    rna:a:1~2903 16~17,19,56,71~72,76
    13310 8uqp:B
    (3.8Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080DFF5 RF00005 Escherichia
    coli
    562    		 39117885 Assembly1
    rna:7:1~40 35,37
    rna:D:1~1534 30~32,37~38
    rna:a:1~2903 2,13,24,75~76
    13311 8uqp:D
    (3.8Å)
    		 1524 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00000ABFE9 RF00177 Escherichia
    coli
    562    		 39117885 Assembly1
    rna:7:1~40 926,1196,1395,1397,1401,1403,1
    493,1499~1501,1505
    rna:B:1~76 790,1339~1341
    rna:a:1~2903 1408~1409,1475,1492,1494,1517
    13312 8uqp:a
    (3.8Å)
    		 2880 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000B21DEA RF02541 Escherichia
    coli
    562    		 39117885 Assembly1
    rna:A:1~76 1851~1852,2111~2112,2168,2180~
    2181,2394~2395,2421~2422
    rna:B:1~76 1907,1922~1923,2255,2493~2494,
    2602
    rna:D:1~1534 1689,1912~1913,1916,1920
    rna:d:1~120 861~864,915,917~919,958,2340
    13313 8uqp:d
    (3.8Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000049E57 RF00001 Escherichia
    coli
    562    		 39117885 Assembly1
    rna:a:1~2903 41,78~81,89~90,96~97,99~101
    13314 8ur0:7
    (3.4Å)
    		 37 N/A N/A N/A synthetic
    construct
    32630    		 39117885 Assembly1
    rna:B:1~76 1~2
    rna:D:1~1534 2~6,8~9
    13315 8ur0:A
    (3.4Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080DFF5 RF00005 Escherichia
    coli
    562    		 39117885 Assembly1
    rna:a:1~2903 16~17,19,56,71~72,76
    13316 8ur0:B
    (3.4Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080DFF5 RF00005 Escherichia
    coli
    562    		 39117885 Assembly1
    rna:7:1~40 35,37
    rna:D:1~1534 30~32,37~38
    rna:a:1~2903 2,13,24,75~76
    13317 8ur0:D
    (3.4Å)
    		 1524 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00000ABFE9 RF00177 Escherichia
    coli
    562    		 39117885 Assembly1
    rna:7:1~40 926,1196,1395,1397,1401,1403,1
    493,1499~1501,1505
    rna:B:1~76 790,1339~1341
    rna:a:1~2903 1408~1409,1475,1492,1494,1517
    13318 8ur0:a
    (3.4Å)
    		 2880 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000B21DEA RF02541 Escherichia
    coli
    562    		 39117885 Assembly1
    rna:A:1~76 1851~1852,2111~2112,2168,2180~
    2181,2394~2395,2421~2422
    rna:B:1~76 1907,1922~1923,2255,2493~2494,
    2602
    rna:D:1~1534 1689,1912~1913,1916,1920
    rna:d:1~120 861~864,915,917~919,958,2340
    13319 8ur0:d
    (3.4Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000049E57 RF00001 Escherichia
    coli
    562    		 39117885 Assembly1
    rna:a:1~2903 41,78~81,89~90,96~97,99~101
    13320 8urb:I
    (3.4Å)
    		 20 N/A URS00029156A3 N/A synthetic
    construct
    32630    		 36993498 Assembly1
    rna:J:24~44 16~33
    13321 8urb:J
    (3.4Å)
    		 21 N/A URS00029156DD N/A synthetic
    construct
    32630    		 36993498 Assembly1
    rna:I:14~33 27~44
    13322 8urh:7
    (5.7Å)
    		 37 N/A N/A N/A synthetic
    construct
    32630    		 39117885 Assembly1
    rna:B:1~76 1~2
    rna:D:1~1534 2~6,8~9
    13323 8urh:A
    (5.7Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080DFF5 RF00005 Escherichia
    coli
    562    		 39117885 Assembly1
    rna:a:1~2903 16~17,19,56,71~72,76
    13324 8urh:B
    (5.7Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080DFF5 RF00005 Escherichia
    coli
    562    		 39117885 Assembly1
    rna:7:1~43 35,37
    rna:D:1~1534 30~32,37~38
    rna:a:1~2903 2,13,24,75~76
    13325 8urh:D
    (5.7Å)
    		 1524 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00000ABFE9 RF00177 Escherichia
    coli
    562    		 39117885 Assembly1
    rna:7:1~43 926,1196,1395,1397,1401,1403,1
    493,1499~1501,1505
    rna:B:1~76 790,1229~1230,1339~1341
    rna:a:1~2903 1408~1409,1475,1492,1494,1517
    13326 8urh:a
    (5.7Å)
    		 2880 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000B21DEA RF02541 Escherichia
    coli
    562    		 39117885 Assembly1
    rna:A:1~76 1851~1852,2111~2112,2168,2180~
    2181,2394~2395,2421~2422
    rna:B:1~76 1907,1922~1923,2255,2493~2494,
    2602
    rna:D:1~1534 1689,1912~1913,1916,1920
    rna:d:1~120 861~864,915,917~919,958,2340
    13327 8urh:d
    (5.7Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000049E57 RF00001 Escherichia
    coli
    562    		 39117885 Assembly1
    rna:a:1~2903 41,78~81,89~90,96~97,99~101
    13328 8uri:7
    (5.3Å)
    		 37 N/A N/A N/A synthetic
    construct
    32630    		 39117885 Assembly1
    rna:B:1~76 1~2
    rna:D:1~1534 2~6,8~9
    13329 8uri:A
    (5.3Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080DFF5 RF00005 Escherichia
    coli
    562    		 39117885 Assembly1
    rna:a:1~2903 16~17,19,56,71~72,76
    13330 8uri:B
    (5.3Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080DFF5 RF00005 Escherichia
    coli
    562    		 39117885 Assembly1
    rna:7:1~43 35,37
    rna:D:1~1534 30~32,37~38
    rna:a:1~2903 2,13,24,75~76
    13331 8uri:D
    (5.3Å)
    		 1524 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00000ABFE9 RF00177 Escherichia
    coli
    562    		 39117885 Assembly1
    rna:7:1~43 926,1196,1395,1397,1401,1403,1
    493,1499~1501,1505
    rna:B:1~76 790,1339~1341
    rna:a:1~2903 1408~1409,1475,1492,1494,1517
    13332 8uri:a
    (5.3Å)
    		 2880 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000B21DEA RF02541 Escherichia
    coli
    562    		 39117885 Assembly1
    rna:A:1~76 1851~1852,2111~2112,2168,2180~
    2181,2394~2395,2421~2422
    rna:B:1~76 1907,1922~1923,2255,2493~2494,
    2602
    rna:D:1~1534 1689,1912~1913,1916,1920
    rna:d:1~120 861~864,915,917~919,958,2340
    13333 8uri:d
    (5.3Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000049E57 RF00001 Escherichia
    coli
    562    		 39117885 Assembly1
    rna:a:1~2903 41,78~81,89~90,96~97,99~101
    13334 8urm:1
    (3.0Å)
    		 2903 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000B21DEA RF02541 Escherichia
    coli
    562    		 40789848 Assembly1
    rna:2:1~1540 1700~1701,1703~1704,1837,1846,
    1848,1895,1912~1916,1919~1920,
    1947~1948,1959~1961
    rna:3:1~120 861~863,915,917~919,958,2340
    rna:5:1~76 1908,1924,2251~2253,2255,2451,
    2585,2601~2602
    rna:6:1~76 882,896,2482,2506~2507,2553~25
    55,2583~2585,2602
    13335 8urm:2
    (3.0Å)
    		 1540 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00177 Escherichia
    coli
    562    		 40789848 Assembly1
    rna:1:1~2903 702,784,899,1407~1409,1418,142
    9,1474~1475,1483~1484,1494~149
    6,1517
    rna:4:11~22 530,693,926,1397,1400~1401,149
    2~1493,1498,1505,1536
    rna:5:1~76 790,966,1229~1230,1338~1340,14
    00
    rna:6:1~76 530,1054,1493
    13336 8urm:3
    (3.0Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00001 Escherichia
    coli
    562    		 40789848 Assembly1
    rna:1:1~2903 41,78~81,89,97,99~100
    13337 8urm:4
    (3.0Å)
    		 12 N/A N/A N/A Escherichia
    coli
    562    		 40789848 Assembly1
    rna:2:1~1540 11~13,15~22
    rna:5:1~76 14~18
    rna:6:1~76 19~21
    13338 8urm:5
    (3.0Å)
    		 77 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Escherichia
    coli
    562    		 40789848 Assembly1
    rna:1:1~2903 3,12~13,74~76
    rna:2:1~1540 30~31,34,38,40~41
    rna:4:11~22 34~38
    13339 8urm:6
    (3.0Å)
    		 76 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Escherichia
    coli
    562    		 40789848 Assembly1
    rna:1:1~2903 20,56,63,74~76
    rna:2:1~1540 34~37
    rna:4:11~22 34~37
    13340 8urx:7
    (6.6Å)
    		 33 N/A N/A N/A synthetic
    construct
    32630    		 39117885 Assembly1
    rna:B:1~76 1~2
    rna:D:1~1534 2~6,8~9
    13341 8urx:A
    (6.6Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080DFF5 RF00005 Escherichia
    coli
    562    		 39117885 Assembly1
    rna:a:1~2903 16~17,19,56,71~72,76
    13342 8urx:B
    (6.6Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080DFF5 RF00005 Escherichia
    coli
    562    		 39117885 Assembly1
    rna:7:1~47 35,37
    rna:D:1~1534 30~32,37~38
    rna:a:1~2903 2,13,24,75~76
    13343 8urx:D
    (6.6Å)
    		 1524 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00000ABFE9 RF00177 Escherichia
    coli
    562    		 39117885 Assembly1
    rna:7:1~47 926,1196,1395,1397,1401,1403,1
    493,1499~1501,1505
    rna:B:1~76 790,1339~1341
    rna:a:1~2903 1408~1409,1475,1492,1494,1517
    13344 8urx:a
    (6.6Å)
    		 2880 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000B21DEA RF02541 Escherichia
    coli
    562    		 39117885 Assembly1
    rna:A:1~76 1851~1852,2111~2112,2168,2180~
    2181,2394~2395,2421~2422
    rna:B:1~76 1907,1922~1923,2255,2493~2494,
    2602
    rna:D:1~1534 1689,1912~1913,1916,1920
    rna:d:1~120 861~864,915,917~919,958,2340
    13345 8urx:d
    (6.6Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000049E57 RF00001 Escherichia
    coli
    562    		 39117885 Assembly1
    rna:a:1~2903 41,78~81,89~90,96~97,99~101
    13346 8ury:7
    (3.1Å)
    		 37 N/A N/A N/A synthetic
    construct
    32630    		 39117885 Assembly1
    rna:B:1~76 1~2
    rna:D:1~1534 2~6,8~9
    13347 8ury:A
    (3.1Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080DFF5 RF00005 Escherichia
    coli
    562    		 39117885 Assembly1
    rna:a:1~2903 16~17,19,56,71~72,76
    13348 8ury:B
    (3.1Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080DFF5 RF00005 Escherichia
    coli
    562    		 39117885 Assembly1
    rna:7:1~47 35,37
    rna:D:1~1534 30~32,37~38
    rna:a:1~2903 2,13,24,75~76
    13349 8ury:D
    (3.1Å)
    		 1524 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00000ABFE9 RF00177 Escherichia
    coli
    562    		 39117885 Assembly1
    rna:7:1~47 926,1196,1395,1397,1401,1403,1
    493,1499~1501,1505
    rna:B:1~76 790,1339~1341
    rna:a:1~2903 1408~1409,1475,1492,1494,1517
    13350 8ury:a
    (3.1Å)
    		 2880 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000B21DEA RF02541 Escherichia
    coli
    562    		 39117885 Assembly1
    rna:A:1~76 1851~1852,2111~2112,2168,2180~
    2181,2394~2395,2421~2422
    rna:B:1~76 1907,1922~1923,2255,2493~2494,
    2602
    rna:D:1~1534 1689,1912~1913,1916,1920
    rna:d:1~120 861~864,915,917~919,958,2340
    13351 8ury:d
    (3.1Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000049E57 RF00001 Escherichia
    coli
    562    		 39117885 Assembly1
    rna:a:1~2903 41,78~81,89~90,96~97,99~101
    13352 8ut0:2
    (3.22Å)
    		 1771 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00005F2C2D RF01960 Saccharomyces
    cerevisiae
    4932    		 39900920
    101

    441

    M080_0.6

    386

    M107_0.6

    497

    490    		 Assembly1
    rna:A:3~3396 628~629,913,971~973,1644~1646,
    1655~1657,1667,1746~1747,1757~
    1759,1780
    rna:m:1~76 577~578,1274,1756
    rna:n:1~76 1001,1191,1462,1575~1577,1637
    rna:D:1~10 577,904,1150,1634,1637,1639,17
    55~1756,1761
    13353 8ut0:A
    (3.22Å)
    		 3184 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000A7632E RF02543 Saccharomyces
    cerevisiae
    4932    		 39900920
    M107_0.6

    M080_0.6

    M299_0.6

    16    		 Assembly1
    rna:2:1~1799 846~848,1935~1936,2125,2207,22
    55~2259,2262~2263,2290~2292,23
    02~2304
    rna:B:1~121 996~999,1052,1054~1056,1156,11
    71,1197,1202~1203
    rna:C:1~158 3~23,59,143,330~337,339~342,34
    5~346,349,351,368~369,404~419,
    656~657,691,1394~1395,1398~139
    9,1419~1420,1441,1530,1558,161
    8~1619,1830~1832,2386~2387,258
    5,2994~2995
    rna:m:1~76 2256,2839,2851,2876,2922~2924,
    2952~2954,2971
    rna:n:1~76 2251~2252,2265~2266,2619~2621,
    2808,2819~2820,2970~2971
    13354 8ut0:B
    (3.22Å)
    		 121 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000055688D RF00001 Saccharomyces
    cerevisiae
    4932    		 39900920 Assembly1
    rna:A:3~3396 79~82,86,90,100,102~104
    13355 8ut0:C
    (3.22Å)
    		 158 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001BF64E RF00002 Saccharomyces
    cerevisiae
    4932    		 39900920
    441    		 Assembly1
    rna:A:3~3396 1,3~22,24~37,40~41,53~54,104,1
    09,112~115,125~126,129,137~157
    13356 8ut0:D
    (3.22Å)
    		 10 N/A N/A N/A Saccharomyces
    cerevisiae
    4932    		 39900920 Assembly1
    rna:2:1~1799 1,3~10
    rna:m:1~76 7~9
    rna:n:1~76 4~6
    13357 8ut0:m
    (3.22Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000042DDAB RF00005 Saccharomyces
    cerevisiae
    4932    		 39900920 Assembly1
    rna:2:1~1799 34~37
    rna:A:3~3396 37~38,63,74~76
    rna:D:1~10 34~37
    13358 8ut0:n
    (3.22Å)
    		 75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00021ED942 RF00005 Saccharomyces
    cerevisiae
    4932    		 39900920 Assembly1
    rna:2:1~1799 30~31,34,38~41
    rna:A:3~3396 11~12,24~25,74~76
    rna:D:1~10 34~37
    13359 8uti:A
    (3.13Å)
    		 3044 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0002F10443 RF02543 Saccharomyces
    cerevisiae
    4932    		 39900920
    M107_0.6

    M080_0.6

    M299_0.6

    16    		 Assembly1
    rna:B:1~121 996~999,1052,1054~1056,1156,11
    71,1197,1203
    rna:C:1~158 3~23,59,143,330~337,339~342,34
    5~346,349,351,368~369,398,404~
    419,656~657,691,1394~1395,1398
    ~1399,1419~1420,1441,1530,1558
    ,1584,1618~1619,1830~1832,2386
    ~2387,2585,2994~2995
    rna:m:1~76 2256,2839,2851,2876,2922~2924,
    2952~2954,2971
    rna:n:1~76 2251,2266,2619~2620,2820,2971
    rna:E:1~1799 846~848,1935~1936,2125,2207,22
    55~2259,2262~2263,2290~2292,23
    02~2303,2330
    13360 8uti:B
    (3.13Å)
    		 121 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000055688D RF00001 Saccharomyces
    cerevisiae
    4932    		 39900920 Assembly1
    rna:A:3~3396 79~82,86,90,100,102~104
    13361 8uti:C
    (3.13Å)
    		 158 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001BF64E RF00002 Saccharomyces
    cerevisiae
    4932    		 39900920
    441    		 Assembly1
    rna:A:3~3396 1,3~22,24~37,40~41,53~54,104,1
    09,113~115,126,129,136~157
    13362 8uti:D
    (3.13Å)
    		 10 N/A N/A N/A Saccharomyces
    cerevisiae
    4932    		 39900920 Assembly1
    rna:m:1~76 7~9
    rna:n:1~76 4~6
    rna:E:1~1799 1,3~9
    13363 8uti:E
    (3.13Å)
    		 1597 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00005F2C2D RF01960 Saccharomyces
    cerevisiae
    4932    		 39900920
    101

    M080_0.6

    386

    M107_0.6

    497

    490    		 Assembly1
    rna:A:3~3396 628,913,971~973,1644~1646,1655
    ~1657,1667,1746~1747,1756~1759
    ,1780
    rna:D:1~10 577,904,1150,1637~1638,1640,17
    55~1756,1761
    rna:m:1~76 577,1274,1756
    rna:n:1~76 1001,1191,1462,1575~1577,1637
    13364 8uti:m
    (3.13Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000042DDAB RF00005 Saccharomyces
    cerevisiae
    4932    		 39900920 Assembly1
    rna:A:3~3396 37~38,52,63,74~76
    rna:D:1~10 34~37
    rna:E:1~1799 34~37
    13365 8uti:n
    (3.13Å)
    		 75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00002CB170 RF00005 Saccharomyces
    cerevisiae
    4932    		 39900920 Assembly1
    rna:A:3~3396 12,24,74~76
    rna:D:1~10 34~37
    rna:E:1~1799 30~31,34,38~41
    13366 8utj:1
    (3.5Å)
    		 2903 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000B21DEA RF02541 Escherichia
    coli
    562    		 40789848 Assembly1
    rna:2:1~1534 1689,1700~1701,1703,1837,1846,
    1848,1912~1916,1919~1920,1947~
    1948,1959~1961
    rna:3:1~120 861~864,915,917~919,958,2340
    rna:5:1~76 1908~1909,1922~1924,2063,2251~
    2253,2255,2451,2585,2602
    13367 8utj:2
    (3.5Å)
    		 1534 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00177 Escherichia
    coli
    562    		 40789848 Assembly1
    rna:1:1~2903 702,784,899,1407~1409,1418,142
    9,1474~1475,1483~1484,1492,149
    4~1495,1517
    rna:4:13~20 693,926,1400~1401,1493,1498
    rna:5:1~76 790,966,1229~1230,1338~1340,14
    00
    13368 8utj:3
    (3.5Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00001 Escherichia
    coli
    562    		 40789848 Assembly1
    rna:1:1~2903 41,78~81,89,96~97,99~100
    13369 8utj:5
    (3.5Å)
    		 77 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Escherichia
    coli
    562    		 40789848 Assembly1
    rna:1:1~2903 3,11~13,24~25,74~76
    rna:2:1~1534 30~31,34,38,40~41
    rna:4:13~20 34~37
    13370 8uu4:A
    (3.0Å)
    		 2903 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00026805EB RF02541 Listeria
    innocua
    1642    		 38407413 Assembly1
    rna:a:4~1548 1750,1752~1753,1865,1870,1881,
    1945~1949,1952~1953,1980~1983,
    1992~1993
    rna:B:2~115 908~910,962,964~965
    13371 8uu4:B
    (3.0Å)
    		 114 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00000EF410 RF00001 Listeria
    innocua
    1642    		 38407413 Assembly1
    rna:A:3~2930 76~78,95,97~98
    13372 8uu4:a
    (3.0Å)
    		 1516 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000070A295 RF00177 Listeria
    innocua
    1642    		 38407413 Assembly1
    rna:A:3~2930 710,792,908,1414~1416,1425~142
    7,1436,1482,1491~1492,1501~150
    3,1525
    13373 8uu5:A
    (3.0Å)
    		 2902 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00026805EB RF02541 Listeria
    innocua
    1642    		 38407413 Assembly1
    rna:a:4~1548 1749~1750,1752~1753,1870,1879,
    1881,1945~1946,1948~1949,1952~
    1953,1980~1983,1992~1993
    rna:x:1~76 1883~1884,1925~1926,2145,2202,
    2427,2454~2455,2465
    rna:B:2~115 908~910,964~965
    13374 8uu5:B
    (3.0Å)
    		 114 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00000EF410 RF00001 Listeria
    innocua
    1642    		 38407413 Assembly1
    rna:A:3~2930 76~78,95,97~98
    13375 8uu5:a
    (3.0Å)
    		 1523 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000070A295 RF00177 Listeria
    innocua
    1642    		 38407413 Assembly1
    rna:x:1~76 701,975,1236,1345~1347
    rna:w:4~17 701,1541~1548
    rna:A:3~2930 710,792,908,1414~1416,1425~142
    7,1436,1482,1491~1492,1501~150
    3,1525
    13376 8uu5:w
    (3.0Å)
    		 14 N/A N/A N/A Escherichia
    phage
    T4
    2681598    		 38407413 Assembly1
    rna:a:4~1548 4~10,13~14
    rna:x:1~76 14~16
    13377 8uu5:x
    (3.0Å)
    		 74 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    562    		 38407413 Assembly1
    rna:a:4~1548 30~31,34,37,40~41
    rna:w:4~17 34~37
    rna:A:3~2930 3,19,56,70~71,75~76
    13378 8uu6:A
    (3.3Å)
    		 2904 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00026805EB RF02541 Listeria
    innocua
    1642    		 38407413 Assembly1
    rna:a:4~1548 1945~1947,1949,1952~1953,1980~
    1981,1992~1994
    rna:x:1~76 1884,1925~1926,2145,2202,2427,
    2454~2455,2465
    rna:B:2~115 908~910,962,965
    13379 8uu6:B
    (3.3Å)
    		 114 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00000EF410 RF00001 Listeria
    innocua
    1642    		 38407413 Assembly1
    rna:A:2~2930 76~78,95,98
    13380 8uu6:a
    (3.3Å)
    		 1516 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000070A295 RF00177 Listeria
    innocua
    1642    		 38407413 Assembly1
    rna:x:1~76 798,975,1236,1345~1347
    rna:w:11~16 701,796~797,935,1407~1408,1506
    rna:A:2~2930 1414~1416,1425,1491~1492,1501~
    1503,1525
    13381 8uu6:x
    (3.3Å)
    		 74 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    562    		 38407413 Assembly1
    rna:a:4~1548 30~31,34~35,38,40~42
    rna:w:11~16 34~37
    rna:A:2~2930 3,19,56,70~71,75~76
    13382 8uu7:A
    (3.2Å)
    		 2909 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00026805EB RF02541 Listeria
    innocua
    1642    		 38407413 Assembly1
    rna:a:4~1548 1750,1752,1945~1946,1949,1952~
    1953,1955,1980~1982,1992~1993
    rna:y:1~76 1884,1918,2145,2202,2427,2454~
    2455
    rna:B:2~115 908~910,962,965
    13383 8uu7:B
    (3.2Å)
    		 114 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00000EF410 RF00001 Listeria
    innocua
    1642    		 38407413 Assembly1
    rna:A:2~2930 76~78,95,97~98
    13384 8uu7:a
    (3.2Å)
    		 1516 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000070A295 RF00177 Listeria
    innocua
    1642    		 38407413 Assembly1
    rna:A:2~2930 710,799,1414~1415,1425~1426,14
    36,1482,1491~1492,1501~1503,15
    25
    13385 8uu7:y
    (3.2Å)
    		 74 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    562    		 38407413 Assembly1
    rna:A:2~2930 3,19,55~56,70~71,76
    13386 8uu8:A
    (3.1Å)
    		 2901 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00026805EB RF02541 Listeria
    innocua
    1642    		 38407413 Assembly1
    rna:a:4~1548 1749~1750,1752~1753,1880~1881,
    1945~1946,1949,1952~1953,1980~
    1981,1992~1993
    rna:x:1~76 1884,1925~1926,2145,2202,2427,
    2454~2455,2465
    rna:B:2~115 908~910,962,964~965,1004
    13387 8uu8:B
    (3.1Å)
    		 114 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00000EF410 RF00001 Listeria
    innocua
    1642    		 38407413 Assembly1
    rna:A:2~2930 76~78,94~95,97~98
    13388 8uu8:a
    (3.1Å)
    		 1516 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000070A295 RF00177 Listeria
    innocua
    1642    		 38407413 Assembly1
    rna:x:1~76 701~702,1236,1345~1347
    rna:w:11~19 701,797,1407~1408,1542
    rna:A:2~2930 710,1414~1415,1425,1436,1482~1
    483,1491~1492,1501~1503,1525
    13389 8uu8:x
    (3.1Å)
    		 74 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    562    		 38407413 Assembly1
    rna:a:4~1548 30~31,37~38,40~41
    rna:w:11~19 34~37
    rna:A:2~2930 3,19,56,70~71,75~76
    13390 8uu9:A
    (3.1Å)
    		 2899 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00026805EB RF02541 Listeria
    innocua
    1642    		 38407413 Assembly1
    rna:a:5~1548 1879,1945~1946,1948~1949,1952~
    1953,1980~1982,1992~1993
    rna:x:1~76 1883~1884,1925,2202,2427~2428,
    2454~2455,2465
    rna:B:2~115 908~910,962,964~965
    13391 8uu9:B
    (3.1Å)
    		 114 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00000EF410 RF00001 Listeria
    innocua
    1642    		 38407413 Assembly1
    rna:A:3~2930 76~78,95,97~98
    13392 8uu9:a
    (3.1Å)
    		 1515 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000070A295 RF00177 Listeria
    innocua
    1642    		 38407413 Assembly1
    rna:x:1~76 975,1236,1345~1347
    rna:w:11~18 935,1407,1513
    rna:A:3~2930 710,1414~1416,1425~1426,1491~1
    492,1501~1503,1525
    13393 8uu9:x
    (3.1Å)
    		 74 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    562    		 38407413 Assembly1
    rna:a:5~1548 30~32,34,40~41
    rna:w:11~18 34~37
    rna:A:3~2930 3,19,56,70~71,75~76
    13394 8uua:A
    (2.7Å)
    		 2894 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00026805EB RF02541 Listeria
    innocua
    1642    		 38407413 Assembly1
    rna:B:2~115 908~910,962,964~966
    13395 8uua:B
    (2.7Å)
    		 114 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00000EF410 RF00001 Listeria
    innocua
    1642    		 38407413 Assembly1
    rna:A:2~2930 76~79,95,97~98
    13396 8uvr:1A
    (2.6Å)
    		 2871 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001698E8 RF02541 Thermus
    thermophilus
    HB8
    300852    		 38165935 Assembly1
    rna:1B:1~120 861~864,915,917~919,958
    rna:1a:4~1533 1689,1700~1704,1832,1836~1837,
    1846,1848,1912~1916,1919~1920,
    1947~1949,1959~1961,2863~2864
    rna:1w:1~76 882,896~897,1913,2482~2483,250
    6~2507,2553~2555,2583~2585,260
    2
    rna:1x:2~76 1907~1909,1922~1924,2251~2253,
    2439,2450~2451,2601~2602
    rna:1y:1~76 1851,2112,2169,2394~2395,2421~
    2422,2432
    13397 8uvr:1B
    (2.6Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DEE8 RF00001 Thermus
    thermophilus
    HB8
    300852    		 38165935 Assembly1
    rna:1A:6~2897 78~81,90,97~98,100~102
    13398 8uvr:1a
    (2.6Å)
    		 1500 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DFED RF00177 Thermus
    thermophilus
    HB8
    300852    		 38165935 Assembly1
    rna:1A:6~2897 702,783~784,899,1407~1409,1418
    ,1429,1442A,1473~1475,1483~148
    4,1494~1496,1517
    rna:1v:12~24 530,926,1196,1397,1400~1402,14
    92~1493,1498,1503,1505,1507
    rna:1w:1~76 530~531,1054,1493
    rna:1x:2~76 790,966,1229~1230,1338~1340,14
    00
    13399 8uvr:1v
    (2.6Å)
    		 13 N/A N/A N/A Tequatrovirus
    T4
    10665    		 38165935 Assembly1
    rna:1a:4~1533 13,15~24
    rna:1w:1~76 19~21
    rna:1x:2~76 16~18
    13400 8uvr:1w
    (2.6Å)
    		 74 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    562    		 38165935 Assembly1
    rna:1A:6~2897 19,37~38,56,64,74~76
    rna:1a:4~1533 34~37
    rna:1v:12~24 34~37
    << < 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 > >>
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    Reference:
  • Chengxin Zhang, Lydia Freddolino (2024) "FURNA: a database for function annotations of RNA structures," PLOS Biology 22(7): e3002476.