SEQ2FUN

FURNA
Download all results in tab-seperated text for 16611 RNAs.
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  • Hover over Ligand to view the name of the ligand and the ligand-binding nucleotides on the RNA.

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    # PDB
    (Resolution)    		 Length EC number
    & GO term     		RNAcentral Rfam Taxon PubMed ATtRACT
    motif     		Ligand &
    binding nucleotides
    13401 8uvr:1x
    (2.6Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    562    		 38165935 Assembly1
    rna:1A:6~2897 11~13,24~25,74~76
    rna:1a:4~1533 29~32,34,38~41
    rna:1v:12~24 34~37
    13402 8uvr:1y
    (2.6Å)
    		 74 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    562    		 38165935 Assembly1
    rna:1A:6~2897 19,56,71,76
    13403 8uvr:2A
    (2.6Å)
    		 2800 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001698E8 RF02541 Thermus
    thermophilus
    HB8
    300852    		 38165935 Assembly2
    rna:2B:1~120 861~863,915,917~919,958
    rna:2a:4~1532 1689,1700~1704,1832,1836~1837,
    1846,1848,1912~1916,1919~1920,
    1947~1949,1959~1961,2864
    rna:2w:2~76 897,1913,2482~2483,2506~2507,2
    553~2555,2583~2585,2602
    rna:2x:2~76 1907~1909,1922~1924,2251~2253,
    2450~2451,2601~2602
    rna:2y:1~76 1851,2112,2169,2394~2395,2421~
    2422,2432
    13404 8uvr:2B
    (2.6Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DEE8 RF00001 Thermus
    thermophilus
    HB8
    300852    		 38165935 Assembly2
    rna:2A:6~2897 78~81,90,97~98,100~101
    13405 8uvr:2a
    (2.6Å)
    		 1503 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DFED RF00177 Thermus
    thermophilus
    HB8
    300852    		 38165935 Assembly2
    rna:2A:6~2897 702,783~784,899~900,1407~1409,
    1418,1429~1430,1442A,1473~1475
    ,1483~1484,1493~1496,1517
    rna:2v:12~24 530,926,1196,1397,1400~1402,14
    92~1493,1498,1503,1505,1507
    rna:2w:2~76 530,1054,1493
    rna:2x:2~76 790,966,1229~1230,1338~1340,14
    00
    rna:2y:1~76 693~694
    13406 8uvr:2v
    (2.6Å)
    		 13 N/A N/A N/A Tequatrovirus
    T4
    10665    		 38165935 Assembly2
    rna:2a:4~1532 13,15~24
    rna:2w:2~76 19~21
    rna:2x:2~76 16~18
    13407 8uvr:2w
    (2.6Å)
    		 72 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    562    		 38165935 Assembly2
    rna:2A:6~2897 37~38,56,64,74~76
    rna:2a:4~1532 34~37
    rna:2v:12~24 34~37
    13408 8uvr:2x
    (2.6Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    562    		 38165935 Assembly2
    rna:2A:6~2897 11~13,24~25,74~76
    rna:2a:4~1532 30~32,34,38,40~41
    rna:2v:12~24 34~37
    13409 8uvr:2y
    (2.6Å)
    		 73 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    562    		 38165935 Assembly2
    rna:2A:6~2897 19,56,71~72,76
    13410 8uvs:1A
    (2.75Å)
    		 2871 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001698E8 RF02541 Thermus
    thermophilus
    HB8
    300852    		 38165935 Assembly1
    rna:1B:1~120 861~864,915,917~919,958
    rna:1a:4~1533 1701~1704,1832,1836~1837,1846,
    1848,1912~1916,1919~1920,1947~
    1948,1959~1961,2863~2864
    rna:1w:1~76 881~882,897,1913,2482~2483,250
    6~2507,2553~2555,2573,2583~258
    5,2602
    rna:1x:2~76 1907~1909,1922~1924,2251~2253,
    2450~2451,2601~2602
    rna:1y:1~76 1851,2112,2169,2394~2395,2421~
    2422
    13411 8uvs:1B
    (2.75Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DEE8 RF00001 Thermus
    thermophilus
    HB8
    300852    		 38165935 Assembly1
    rna:1A:6~2897 78~81,90,97~98,100~102
    13412 8uvs:1a
    (2.75Å)
    		 1500 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DFED RF00177 Thermus
    thermophilus
    HB8
    300852    		 38165935 Assembly1
    rna:1A:6~2897 702,783~784,899~900,1407~1409,
    1418,1429,1442A,1473~1475,1483
    ~1484,1494~1496,1517
    rna:1v:12~24 530,926,1196,1397,1400~1402,14
    92~1493,1498,1503,1505,1507
    rna:1w:1~76 530~531,1054,1493
    rna:1x:2~76 790,966,1229~1230,1338~1340,14
    00
    13413 8uvs:1v
    (2.75Å)
    		 13 N/A N/A N/A Tequatrovirus
    T4
    10665    		 38165935 Assembly1
    rna:1a:4~1533 12~13,15~24
    rna:1w:1~76 19~22
    rna:1x:2~76 16~18
    13414 8uvs:1w
    (2.75Å)
    		 74 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    562    		 38165935 Assembly1
    rna:1A:6~2897 19,37~38,56,64,74~76
    rna:1a:4~1533 34~37
    rna:1v:12~24 34~37
    13415 8uvs:1x
    (2.75Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    562    		 38165935 Assembly1
    rna:1A:6~2897 11~13,24~25,74~76
    rna:1a:4~1533 30~32,34,38,40~41
    rna:1v:12~24 34~37
    13416 8uvs:1y
    (2.75Å)
    		 74 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    562    		 38165935 Assembly1
    rna:1A:6~2897 19,56,71~72,76
    13417 8uvs:2A
    (2.75Å)
    		 2800 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001698E8 RF02541 Thermus
    thermophilus
    HB8
    300852    		 38165935 Assembly2
    rna:2B:1~120 861~863,915,917~919,958
    rna:2a:4~1532 1700~1704,1832,1836~1837,1846,
    1848,1912~1916,1919~1920,1947~
    1949,1959~1961,2864
    rna:2w:2~76 881,896~897,1913,2482~2483,250
    6~2507,2553~2555,2583~2585,260
    2
    rna:2x:2~76 1907~1909,1922~1924,2251~2253,
    2255,2439,2450~2451,2601~2602
    rna:2y:1~76 1851,2112,2169,2394~2395,2421~
    2422
    13418 8uvs:2B
    (2.75Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DEE8 RF00001 Thermus
    thermophilus
    HB8
    300852    		 38165935 Assembly2
    rna:2A:6~2897 78~81,90,97~98,100~101
    13419 8uvs:2a
    (2.75Å)
    		 1503 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DFED RF00177 Thermus
    thermophilus
    HB8
    300852    		 38165935 Assembly2
    rna:2A:6~2897 702,783~784,899~900,1407~1409,
    1418,1429~1430,1442A,1473~1475
    ,1483~1484,1493~1496,1517
    rna:2v:12~24 530,926,1196,1397,1400~1402,14
    92~1493,1498,1503,1505,1507
    rna:2w:2~76 530,1054,1493
    rna:2x:2~76 790,966,1229~1230,1338~1340,14
    00
    13420 8uvs:2v
    (2.75Å)
    		 13 N/A N/A N/A Tequatrovirus
    T4
    10665    		 38165935 Assembly2
    rna:2a:4~1532 13,15~24
    rna:2w:2~76 19~21
    rna:2x:2~76 16~18
    13421 8uvs:2w
    (2.75Å)
    		 72 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    562    		 38165935 Assembly2
    rna:2A:6~2897 19,37~38,55~56,64,74~76
    rna:2a:4~1532 34~37
    rna:2v:12~24 34~37
    13422 8uvs:2x
    (2.75Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    562    		 38165935 Assembly2
    rna:2A:6~2897 11~13,24~25,74~76
    rna:2a:4~1532 30~32,34,38~41
    rna:2v:12~24 34~37
    13423 8uvs:2y
    (2.75Å)
    		 73 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    562    		 38165935 Assembly2
    rna:2A:6~2897 19,56,71~72,76
    13424 8ux4:A
    (3.3Å)
    		 2876 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02541
    RF02540
    RF02543
    RF02540
    RF02540
    RF02543
    RF02543    		 Saccharomyces
    cerevisiae
    4932    		 N/A
    27

    22

    53

    149

    73

    127

    9

    103

    434

    101

    490    		 Assembly1
    rna:AL:13~1649 1816,1819,1847,1849~1850,1859~
    1861
    rna:AM:1~76 2662,2688~2689
    13425 8ux4:AL
    (3.3Å)
    		 1498 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00177
    RF01959
    RF02542
    RF01960    		 Saccharomyces
    cerevisiae
    4932    		 N/A
    132

    434

    22    		 Assembly1
    rna:AM:1~76 855,1031,1406~1409,1468
    rna:AN:1~13 632,644,758,853~855,1228,1465,
    1468~1469
    rna:A:8~3293 1475,1477,1486,1488~1489,1575~
    1576
    13426 8ux4:AM
    (3.3Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS0000B21DDE RF00005 Saccharomyces
    cerevisiae
    4932    		 N/A Assembly1
    rna:AL:13~1649 29~32,34,38~42
    rna:AN:1~13 31~32,34~40
    rna:A:8~3293 74~76
    13427 8ux4:AN
    (3.3Å)
    		 13 N/A N/A N/A Saccharomyces
    cerevisiae
    4932    		 N/A Assembly1
    rna:AL:13~1649 1~2,6,8,11~13
    rna:AM:1~76 7~11
    13428 8ux8:1
    (3.6Å)
    		 2903 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000B21DEA RF02541 Escherichia
    coli
    562    		 40789848 Assembly1
    rna:2:1~1534 1686,1700~1703,1837,1846,1848,
    1895,1912~1913,1916,1919~1920,
    1947~1948,1959~1961
    rna:3:1~120 861~863,917~918,958~959
    rna:5:1~76 1908,1922~1924,2063~2064,2251~
    2253,2255,2450~2451,2602
    13429 8ux8:2
    (3.6Å)
    		 1534 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00177 Escherichia
    coli
    562    		 40789848 Assembly1
    rna:1:1~2903 702,784,899,1407~1409,1418,142
    8~1429,1473~1475,1483~1484,149
    2,1494~1496,1517
    rna:4:11~21 530,693,926~927,1054,1400,1402
    ,1493,1498,1503,1505~1506,1531
    rna:5:1~76 790,966,1229,1338~1340,1400
    13430 8ux8:3
    (3.6Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00001 Escherichia
    coli
    562    		 40789848 Assembly1
    rna:1:1~2903 78~80,89,97,99
    13431 8ux8:4
    (3.6Å)
    		 11 N/A N/A N/A Escherichia
    coli
    562    		 40789848 Assembly1
    rna:2:1~1534 11~13,15~19,21
    rna:5:1~76 15~18
    13432 8ux8:5
    (3.6Å)
    		 77 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Escherichia
    coli
    562    		 40789848 Assembly1
    rna:1:1~2903 3,12~13,25,74~76
    rna:2:1~1534 29~31,34,38,40~41
    rna:4:11~21 34~37
    13433 8uxa:A
    (3.2Å)
    		 2876 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02541 Saccharomyces
    cerevisiae
    4932    		 N/A
    27

    22

    53

    149

    73

    127

    9

    103

    434

    101

    490    		 Assembly1
    rna:AM:1~76 1822~1824,2278~2279,2851~2852,
    2869
    13434 8uxa:AL
    (3.2Å)
    		 1501 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000060F99B RF00177 Saccharomyces
    cerevisiae
    4932    		 N/A
    132

    434

    22    		 Assembly1
    rna:AM:1~76 855,1031,1261,1408~1409,1468
    rna:AN:1~13 644,758,854,856,991,1101,1468,
    1585,1590,1598
    13435 8uxa:AM
    (3.2Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS0000B21DDE RF00005 Saccharomyces
    cerevisiae
    4932    		 N/A Assembly1
    rna:AL:13~1649 30~32,34,38~39
    rna:AN:1~13 35~37
    rna:A:8~3293 12~13,73~76
    13436 8uxa:AN
    (3.2Å)
    		 13 N/A N/A N/A Saccharomyces
    cerevisiae
    4932    		 N/A Assembly1
    rna:AL:13~1649 1~2,4,6~12
    rna:AM:1~76 6~8
    13437 8uxb:1
    (2.9Å)
    		 2900 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02541 Escherichia
    coli
    562    		 40789848 Assembly1
    rna:2:2~1540 1700,1703,1846,1912~1913,1915~
    1916,1919,1947~1948,1959~1961
    rna:3:1~120 861~864,915,917~919,958
    rna:5:1~76 1850~1851,1892~1893,2112~2113,
    2121,2168,2180~2181,2394~2395,
    2421~2422,2432
    13438 8uxb:2
    (2.9Å)
    		 1539 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00177 Escherichia
    coli
    562    		 40789848 Assembly1
    rna:1:1~2903 702,1407~1409,1418,1428,1474~1
    475,1483~1485,1493~1495
    rna:4:13~21 530,926,1400~1401,1492~1493,14
    98
    rna:5:1~76 790,966,1338~1340,1400
    13439 8uxb:3
    (2.9Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00001 Escherichia
    coli
    562    		 40789848 Assembly1
    rna:1:1~2903 78~81,89~90,97,99~100
    13440 8uxb:5
    (2.9Å)
    		 77 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Escherichia
    coli
    562    		 40789848 Assembly1
    rna:1:1~2903 17A,19~20,56~57,70~71,75~76
    rna:2:2~1540 30~31,34,38~39,41~42
    rna:4:13~21 34~38
    13441 8uz3:1
    (3.2Å)
    		 2903 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02541 Escherichia
    coli
    562    		 N/A Assembly1
    rna:2:2~1540 1703~1704,1846,1848,1895,1912~
    1915,1919~1920,1947~1948,1959~
    1961
    rna:3:1~120 861~864,915,917~919,958
    rna:5:2~76 1850~1851,1892~1893,2112,2168,
    2394,2421~2422,2432
    13442 8uz3:2
    (3.2Å)
    		 1539 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00177 Escherichia
    coli
    562    		 N/A Assembly1
    rna:1:1~2903 702,1408~1410,1418,1429,1483~1
    484,1492,1494~1495,1517
    rna:4:13~16 693,926
    rna:5:2~76 966,1229,1338~1339
    13443 8uz3:3
    (3.2Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00001 Escherichia
    coli
    562    		 N/A Assembly1
    rna:1:1~2903 78~80,89,96,99~101
    13444 8uz3:5
    (3.2Å)
    		 76 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Escherichia
    coli
    562    		 N/A Assembly1
    rna:1:1~2903 4,19,56,70~71,75~76
    rna:2:2~1540 30~31,34,40~41
    rna:4:13~16 34~37
    13445 8uzg:1
    (3.7Å)
    		 2903 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02541 Escherichia
    coli
    562    		 40789848 Assembly1
    rna:2:2~1540 1689,1700~1701,1703~1704,1846,
    1848,1895,1912~1916,1919~1920,
    1947~1948,1959~1961
    rna:3:1~120 861~864,915,917~919,958
    rna:5:2~76 1850~1851,1892~1893,2112,2168,
    2395,2421~2422,2432
    13446 8uzg:2
    (3.7Å)
    		 1539 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00177 Escherichia
    coli
    562    		 40789848 Assembly1
    rna:1:1~2903 702,1407~1409,1418,1429,1474~1
    475,1483~1484,1492~1495,1517
    rna:4:13~16 693,926
    rna:5:2~76 789,966,1229,1338~1340
    13447 8uzg:3
    (3.7Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00001 Escherichia
    coli
    562    		 40789848 Assembly1
    rna:1:1~2903 78~81,89~90,96~97,99~101
    13448 8uzg:5
    (3.7Å)
    		 76 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Escherichia
    coli
    562    		 40789848 Assembly1
    rna:1:1~2903 4~5,19,56,70~71,75~76
    rna:2:2~1540 30~31,34,37,41
    rna:4:13~16 34~37
    13449 8v03:1
    (4.0Å)
    		 2900 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02541 Escherichia
    coli
    562    		 40789848 Assembly1
    rna:2:2~1532 1703,1846,1912~1913,1915~1916,
    1919~1920,1947~1949,1959~1961
    rna:3:1~120 861~864,915,917~919,958~959,23
    39~2340
    rna:5:1~76 1850~1851,1891~1893,2112~2113,
    2119,2168,2180,2394~2395,2421~
    2422,2432
    13450 8v03:2
    (4.0Å)
    		 1531 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00177 Escherichia
    coli
    562    		 40789848 Assembly1
    rna:1:1~2903 702,1407~1409,1418~1419,1428~1
    429,1483~1484,1493~1495,1517
    rna:5:1~76 790,966,1229,1338~1341
    13451 8v03:3
    (4.0Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00001 Escherichia
    coli
    562    		 40789848 Assembly1
    rna:1:1~2903 41,78~81,89~90,96~97,99~100
    13452 8v03:5
    (4.0Å)
    		 77 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Escherichia
    coli
    562    		 40789848 Assembly1
    rna:1:1~2903 17A,19,56~57,70~72,75~76
    rna:2:2~1532 29~32,34,38,40~41
    rna:4:13~16 34~38
    13453 8v83:1
    (2.53Å)
    		 2015 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000061F377 RF02543 Saccharomyces
    cerevisiae
    BY4741
    1247190    		 38632236 Assembly1
    rna:2:1~158 1,3~23,59,143,330~337,339~342,
    344~346,349,351,368~369,404~42
    0,422,656~657,691,1394~1395,13
    99,1418~1420,1441,2386,2997
    rna:6:1~232 1,3
    13454 8v83:2
    (2.53Å)
    		 150 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001BF64E RF00002 Saccharomyces
    cerevisiae
    BY4741
    1247190    		 38632236 Assembly1
    rna:1:1~3396 1~22,24~37,40~41,53,104,117,13
    6~150,152~157
    13455 8v83:6
    (2.53Å)
    		 58 N/A URS000013305B N/A Saccharomyces
    cerevisiae
    BY4741
    1247190    		 38632236 Assembly1
    rna:2:1~158 1,230
    13456 8v84:1
    (2.7Å)
    		 1970 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000061F377 RF02543 Saccharomyces
    cerevisiae
    BY4741
    1247190    		 38632236 Assembly1
    rna:2:1~158 1,3~23,59,143,330~337,339~342,
    345~346,349,351,368~369,404~42
    0,422,656~657,691,1394~1395,13
    99,1418~1420,1441,2386,2997
    rna:6:1~232 1,3
    13457 8v84:2
    (2.7Å)
    		 150 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001BF64E RF00002 Saccharomyces
    cerevisiae
    BY4741
    1247190    		 38632236 Assembly1
    rna:1:1~3396 1~22,24~37,40~41,53,104,117,13
    6~150,152~156
    13458 8v84:6
    (2.7Å)
    		 58 N/A URS000013305B N/A Saccharomyces
    cerevisiae
    BY4741
    1247190    		 38632236 Assembly1
    rna:2:1~158 1,230
    13459 8v87:1
    (2.66Å)
    		 2489 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000061F377 RF02543 Saccharomyces
    cerevisiae
    BY4741
    1247190    		 38632236 Assembly1
    rna:2:1~158 1,3~23,59,143,330~337,339~342,
    345~346,349,351,368~369,404~41
    9,656~657,691,1394~1395,1399,1
    418~1420,1441,1530,1558,1584,1
    618~1619,1831,2386,2994~2995
    rna:6:1~232 1,3,1570
    13460 8v87:2
    (2.66Å)
    		 155 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001BF64E RF00002 Saccharomyces
    cerevisiae
    BY4741
    1247190    		 38632236 Assembly1
    rna:1:1~3396 1~22,24~37,40~41,52~53,104,109
    ,114~115,128~129,136~150,152~1
    57
    13461 8v87:6
    (2.66Å)
    		 87 N/A URS000013305B N/A Saccharomyces
    cerevisiae
    BY4741
    1247190    		 38632236 Assembly1
    rna:1:1~3396 229,232
    rna:2:1~158 1,230
    13462 8v9j:A
    (3.1Å)
    		 3073 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00003A7753 RF02541 Mycolicibacterium
    smegmatis
    MC2
    155
    246196    		 38355796 Assembly1
    rna:a:7~1517 1918~1919,1921~1922,2063,2065,
    2136~2137,2140,2143~2144,2171~
    2173,2183~2185
    rna:y:1~76 2067~2068,2115~2117,2335,2391,
    2618~2619,2645~2646,2656
    rna:B:1~118 976~978,1030,1032~1033
    13463 8v9j:B
    (3.1Å)
    		 118 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00000ACC0A RF00001 Mycolicibacterium
    smegmatis
    MC2
    155
    246196    		 38355796 Assembly1
    rna:A:2~3120 79~81,94~98
    13464 8v9j:a
    (3.1Å)
    		 1511 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001AF2F7 RF00177 Mycolicibacterium
    smegmatis
    MC2
    155
    246196    		 38355796 Assembly1
    rna:y:1~76 948,1211,1320~1322
    rna:A:2~3120 682,1390~1391,1401~1402,1412,1
    458~1459,1467~1468,1477~1479,1
    501
    13465 8v9j:y
    (3.1Å)
    		 74 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Mycolicibacterium
    smegmatis
    MC2
    155
    246196    		 38355796 Assembly1
    rna:a:7~1517 30~32,34,41
    rna:v:1~3 35~37
    rna:A:2~3120 3~4,19,56,70~71,75~76
    13466 8v9k:A
    (3.1Å)
    		 3081 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00003A7753 RF02541 Mycolicibacterium
    smegmatis
    MC2
    155
    246196    		 38355796 Assembly1
    rna:a:7~1517 1907,1918,1921,2063,2065,2136~
    2137,2140,2143~2144,2171~2173,
    2183~2184
    rna:y:1~76 2067~2068,2116~2117,2335,2391,
    2618~2619,2645~2646,2656
    rna:B:1~118 976~978,1032~1033
    13467 8v9k:B
    (3.1Å)
    		 118 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00000ACC0A RF00001 Mycolicibacterium
    smegmatis
    MC2
    155
    246196    		 38355796 Assembly1
    rna:A:2~3120 79~81,94~98
    13468 8v9k:a
    (3.1Å)
    		 1511 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001AF2F7 RF00177 Mycolicibacterium
    smegmatis
    MC2
    155
    246196    		 38355796 Assembly1
    rna:y:1~76 948,1210,1320~1322
    rna:A:2~3120 682,1390~1391,1401~1402,1412,1
    458~1459,1467~1468,1476~1479,1
    501
    13469 8v9k:y
    (3.1Å)
    		 74 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Mycolicibacterium
    smegmatis
    MC2
    155
    246196    		 38355796 Assembly1
    rna:a:7~1517 30~31,34,40~41
    rna:v:1~3 34~37
    rna:A:2~3120 3~4,19,56,70~71,75~76
    13470 8v9l:A
    (3.0Å)
    		 3073 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00003A7753 RF02541 Mycolicibacterium
    smegmatis
    MC2
    155
    246196    		 38355796 Assembly1
    rna:a:7~1517 1919,1921~1922,2063~2065,2136~
    2137,2139~2140,2143~2144,2171~
    2173,2183~2184
    rna:y:1~76 2067~2068,2115~2117,2335,2391,
    2618~2619,2645~2646,2656
    rna:B:1~118 976~978,1030,1032~1033
    13471 8v9l:B
    (3.0Å)
    		 118 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00000ACC0A RF00001 Mycolicibacterium
    smegmatis
    MC2
    155
    246196    		 38355796 Assembly1
    rna:A:2~3120 79~81,95~98
    13472 8v9l:a
    (3.0Å)
    		 1511 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001AF2F7 RF00177 Mycolicibacterium
    smegmatis
    MC2
    155
    246196    		 38355796 Assembly1
    rna:v:1~4 673,908
    rna:y:1~76 769,948,1210~1211,1320~1322
    rna:A:2~3120 682,1390~1392,1401~1402,1412,1
    458~1459,1467~1468,1477~1479,1
    501
    13473 8v9l:y
    (3.0Å)
    		 74 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Mycolicibacterium
    smegmatis
    MC2
    155
    246196    		 38355796 Assembly1
    rna:a:7~1517 30~32,34,37~38,40~41
    rna:v:1~4 35~37
    rna:A:2~3120 3~4,19,56,70~71,75~76
    13474 8vaj:E
    (3.45Å)
    		 12 N/A URS00029EB358 N/A Homo
    sapiens
    9606    		 39368090
    399    		 Assembly1
    rna:F:5~16 2~9
    13475 8vaj:F
    (3.45Å)
    		 12 N/A URS00029EB309 N/A Homo
    sapiens
    9606    		 39368090 Assembly1
    rna:E:1~14 6~13
    13476 8vaw:A
    (1.25Å)
    		 15 N/A N/A N/A synthetic
    construct
    32630    		 38579124 Assembly1
    rna:B:1~15 2~15
    13477 8vaw:B
    (1.25Å)
    		 15 N/A N/A N/A synthetic
    construct
    32630    		 38579124 Assembly1
    rna:A:1~15 2~15
    13478 8vax:AAA
    (1.417Å)
    		 15 N/A N/A N/A synthetic
    construct
    32630    		 38579124 Assembly1
    rna:BBB:1~15 2~15
    13479 8vax:BBB
    (1.417Å)
    		 15 N/A N/A N/A synthetic
    construct
    32630    		 38579124 Assembly1
    rna:AAA:1~15 2~15
    13480 8vfs:A
    (2.7Å)
    		 27 N/A URS000305491C N/A Providencia
    stuartii
    588    		 38992441 Assembly1
    rna:B:1~27 1~5,7~27
    13481 8vfs:B
    (2.7Å)
    		 27 N/A URS000305491C N/A Providencia
    stuartii
    588    		 38992441 Assembly1
    rna:A:1~27 1~5,7~27
    13482 8vft:2
    (3.3Å)
    		 74 GO:0030533 (F) triplet codon-amino aci... URS0003054929 RF00005 Oryctolagus
    cuniculus
    9986    		 41037622 Assembly1
    rna:5:1~5069 2~3,74~76
    rna:9:1~1869 33~34
    rna:w:16~21 35~37
    13483 8vft:3
    (3.3Å)
    		 74 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000086855F RF00005 Oryctolagus
    cuniculus
    9986    		 41037622 Assembly1
    rna:5:1~5069 3~4,70~72,75~76
    rna:9:1~1869 30~32,34,40~41
    rna:w:16~21 35~37
    13484 8vft:5
    (3.3Å)
    		 3529 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00029156CB RF02543 Oryctolagus
    cuniculus
    9986    		 41037622 Assembly1
    rna:7:1~120 1736~1739,1741,1792~1796,1894,
    1909,1936,1942
    rna:8:1~156 1~11,13~22,58,146~147,339,341~
    348,350~353,356~357,360,362,37
    9~380,415~430,1304~1305,1333~1
    334,1371,2308~2309,2312~2313,2
    333~2334,2355,2444,2472,2487,2
    508~2509,2542~2544,2778~2780,3
    890
    rna:9:1~1869 1563~1565,2884~2885,3629,3699~
    3700,3712,3759~3761,3763,3766~
    3767,3794~3796,3806~3807
    rna:3:1~76 3714~3715,3738~3740,4341~4342,
    4370~4371
    rna:2:1~76 3910,4196~4198,4200,4385,4396~
    4397,4531,4547~4548
    13485 8vft:7
    (3.3Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000002B0D5 RF00001 Oryctolagus
    cuniculus
    9986    		 41037622 Assembly1
    rna:5:1~5069 77~80,84,88,98,100~103
    13486 8vft:8
    (3.3Å)
    		 156 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B2C76 RF00002 Oryctolagus
    cuniculus
    9986    		 41037622 Assembly1
    rna:5:1~5069 3~22,24~37,40~41,53~54,103,108
    ,110~113,115,126~128,136~149,1
    51~156
    13487 8vft:9
    (3.3Å)
    		 1698 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0003054904 RF01960 Oryctolagus
    cuniculus
    9986    		 41037622 Assembly1
    rna:5:1~5069 677~678,970,1028~1030,1051~105
    2,1708~1710,1719~1721,1731,181
    5~1816,1824~1827,1849
    rna:3:1~76 1248,1524~1525,1639~1641
    rna:w:16~21 1207,1701~1702,1830,1837
    rna:2:1~76 1247,1331,1701
    13488 8vio:5
    (3.26Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Mycolicibacterium
    smegmatis
    MC2
    155
    246196    		 39913204 Assembly1
    rna:A:2~3120 3~4,20,57,71~73,76~77
    rna:a:7~1517 31~32,41~42
    13489 8vio:A
    (3.26Å)
    		 3119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000BC467B RF02541 Mycolicibacterium
    smegmatis
    MC2
    155
    246196    		 39913204 Assembly1
    rna:B:1~118 976~978,1030,1032~1034
    rna:5:1~77 2067~2068,2115~2117,2335,2391,
    2618,2645,2656
    rna:a:7~1517 1919,1921,2063,2065,2136~2137,
    2140,2143~2144,2171~2173,2183~
    2184
    13490 8vio:B
    (3.26Å)
    		 118 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00000ACC0A RF00001 Mycolicibacterium
    smegmatis
    MC2
    155
    246196    		 39913204 Assembly1
    rna:A:2~3120 79~82,94~95,97~98
    13491 8vio:a
    (3.26Å)
    		 1511 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001AF2F7 RF00177 Mycolicibacterium
    smegmatis
    MC2
    155
    246196    		 39913204 Assembly1
    rna:A:2~3120 682,1390~1392,1401~1402,1412,1
    458,1467~1468,1475~1479,1501
    rna:5:1~77 1211,1320~1322
    13492 8vk0:A
    (3.14Å)
    		 3119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000BC467B RF02541 Mycolicibacterium
    smegmatis
    MC2
    155
    246196    		 39913204 Assembly1
    rna:B:1~118 976~978,1030,1032~1033
    13493 8vk0:B
    (3.14Å)
    		 118 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00000ACC0A RF00001 Mycolicibacterium
    smegmatis
    MC2
    155
    246196    		 39913204 Assembly1
    rna:A:2~3120 79~81,94~95,97~98
    13494 8vk7:A
    (3.09Å)
    		 2950 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000BC467B RF02541 Mycolicibacterium
    smegmatis
    MC2
    155
    246196    		 39913204 Assembly1
    rna:B:1~114 976~978,1032~1033
    13495 8vk7:B
    (3.09Å)
    		 114 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00000ACC0A RF00001 Mycolicibacterium
    smegmatis
    MC2
    155
    246196    		 39913204 Assembly1
    rna:A:2~3120 79~81,94~98
    13496 8vki:A
    (2.96Å)
    		 2952 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000BC467B RF02541 Mycolicibacterium
    smegmatis
    MC2
    155
    246196    		 39913204 Assembly1
    rna:B:1~118 976~978,1030,1032~1034
    13497 8vki:B
    (2.96Å)
    		 118 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00000ACC0A RF00001 Mycolicibacterium
    smegmatis
    MC2
    155
    246196    		 39913204 Assembly1
    rna:A:2~3120 79~82,95,97~98
    13498 8vkv:7
    (3.6Å)
    		 37 N/A N/A N/A synthetic
    construct
    32630    		 N/A Assembly1
    rna:B:1~76 1~2
    rna:D:1~1534 2~6,8~9
    13499 8vkv:A
    (3.6Å)
    		 76 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Escherichia
    coli
    562    		 N/A Assembly1
    rna:a:1~2903 16~17,19,56,71~72,76
    13500 8vkv:B
    (3.6Å)
    		 76 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Escherichia
    coli
    562    		 N/A Assembly1
    rna:7:1~50 35,37
    rna:D:1~1534 30~32,37~38
    rna:a:1~2903 2,13,24,75~76
    << < 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 > >>
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    Reference:
  • Chengxin Zhang, Lydia Freddolino (2024) "FURNA: a database for function annotations of RNA structures," PLOS Biology 22(7): e3002476.