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FURNA
Download all results in tab-seperated text for 14210 RNAs.
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  • Hover over Ligand to view the name of the ligand and the ligand-binding nucleotides on the RNA.

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    # PDB
    (Resolution)    		 Length EC number
    & GO term     		RNAcentral Rfam Taxon PubMed ATtRACT
    motif     		Ligand &
    binding nucleotides
    13401 8vfs:B
    (2.7Å)
    		 27 N/A N/A N/A Providencia
    stuartii
    588    		 38992441 Assembly1
    rna:A:1~27 1~5,7~27
    13402 8vft:2
    (3.3Å)
    		 74 N/A N/A N/A Oryctolagus
    cuniculus
    9986    		 N/A Assembly1
    rna:5:1~5069 2~3,74~76
    rna:9:1~1869 33~34
    rna:w:16~21 35~37
    13403 8vft:3
    (3.3Å)
    		 74 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Oryctolagus
    cuniculus
    9986    		 N/A Assembly1
    rna:5:1~5069 3~4,70~72,75~76
    rna:9:1~1869 30~32,34,40~41
    rna:w:16~21 35~37
    13404 8vft:5
    (3.3Å)
    		 3529 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02540
    RF02543
    RF02541    		 Oryctolagus
    cuniculus
    9986    		 N/A Assembly1
    rna:7:1~120 1736~1739,1741,1792~1796,1894,
    1909,1936,1942
    rna:8:1~156 1~11,13~22,58,146~147,339,341~
    348,350~353,356~357,360,362,37
    9~380,415~430,1304~1305,1333~1
    334,1371,2308~2309,2312~2313,2
    333~2334,2355,2444,2472,2487,2
    508~2509,2542~2544,2778~2780,3
    890
    rna:9:1~1869 1563~1565,2884~2885,3629,3699~
    3700,3712,3759~3761,3763,3766~
    3767,3794~3796,3806~3807
    rna:3:1~76 3714~3715,3738~3740,4341~4342,
    4370~4371
    rna:2:1~76 3910,4196~4198,4200,4385,4396~
    4397,4531,4547~4548
    13405 8vft:7
    (3.3Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00001 Oryctolagus
    cuniculus
    9986    		 N/A Assembly1
    rna:5:1~5069 77~80,84,88,98,100~103
    13406 8vft:8
    (3.3Å)
    		 156 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00002
    RF02540    		 Oryctolagus
    cuniculus
    9986    		 N/A Assembly1
    rna:5:1~5069 3~22,24~37,40~41,53~54,103,108
    ,110~113,115,126~128,136~149,1
    51~156
    13407 8vft:9
    (3.3Å)
    		 1698 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF01960
    RF02542
    RF01959
    RF00177    		 Oryctolagus
    cuniculus
    9986    		 N/A Assembly1
    rna:5:1~5069 677~678,970,1028~1030,1051~105
    2,1708~1710,1719~1721,1731,181
    5~1816,1824~1827,1849
    rna:3:1~76 1248,1524~1525,1639~1641
    rna:w:16~21 1207,1701~1702,1830,1837
    rna:2:1~76 1247,1331,1701
    13408 8vio:5
    (3.26Å)
    		 77 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Mycolicibacterium
    smegmatis
    MC2
    155
    246196    		 39913204 Assembly1
    rna:A:2~3120 3~4,20,57,71~73,76~77
    rna:a:7~1517 31~32,41~42
    13409 8vio:A
    (3.26Å)
    		 3119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02540
    RF02541
    RF02543
    RF00002    		 Mycolicibacterium
    smegmatis
    MC2
    155
    246196    		 39913204 Assembly1
    rna:B:1~118 976~978,1030,1032~1034
    rna:5:1~77 2067~2068,2115~2117,2335,2391,
    2618,2645,2656
    rna:a:7~1517 1919,1921,2063,2065,2136~2137,
    2140,2143~2144,2171~2173,2183~
    2184
    13410 8vio:B
    (3.26Å)
    		 118 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00001 Mycolicibacterium
    smegmatis
    MC2
    155
    246196    		 39913204 Assembly1
    rna:A:2~3120 79~82,94~95,97~98
    13411 8vio:a
    (3.26Å)
    		 1511 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00177
    RF01959
    RF02542
    RF01960    		 Mycolicibacterium
    smegmatis
    MC2
    155
    246196    		 39913204 Assembly1
    rna:A:2~3120 682,1390~1392,1401~1402,1412,1
    458,1467~1468,1475~1479,1501
    rna:5:1~77 1211,1320~1322
    13412 8vk0:A
    (3.14Å)
    		 3119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02540
    RF02541
    RF02543
    RF00002    		 Mycolicibacterium
    smegmatis
    MC2
    155
    246196    		 39913204 Assembly1
    rna:B:1~118 976~978,1030,1032~1033
    13413 8vk0:B
    (3.14Å)
    		 118 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00001 Mycolicibacterium
    smegmatis
    MC2
    155
    246196    		 39913204 Assembly1
    rna:A:2~3120 79~81,94~95,97~98
    13414 8vk7:A
    (3.09Å)
    		 2950 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02540
    RF02541
    RF02543
    RF00002    		 Mycolicibacterium
    smegmatis
    MC2
    155
    246196    		 39913204 Assembly1
    rna:B:1~114 976~978,1032~1033
    13415 8vk7:B
    (3.09Å)
    		 114 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00001 Mycolicibacterium
    smegmatis
    MC2
    155
    246196    		 39913204 Assembly1
    rna:A:2~3120 79~81,94~98
    13416 8vki:A
    (2.96Å)
    		 2952 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02540
    RF02541
    RF02543
    RF00002    		 Mycolicibacterium
    smegmatis
    MC2
    155
    246196    		 39913204 Assembly1
    rna:B:1~118 976~978,1030,1032~1034
    13417 8vki:B
    (2.96Å)
    		 118 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00001 Mycolicibacterium
    smegmatis
    MC2
    155
    246196    		 39913204 Assembly1
    rna:A:2~3120 79~82,95,97~98
    13418 8vkw:A
    (3.44Å)
    		 3043 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02540
    RF02541
    RF02543
    RF00002    		 Mycolicibacterium
    smegmatis
    MC2
    155
    246196    		 39913204 Assembly1
    rna:B:1~118 976~978,1030,1032~1034
    13419 8vkw:B
    (3.44Å)
    		 118 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00001 Mycolicibacterium
    smegmatis
    MC2
    155
    246196    		 39913204 Assembly1
    rna:A:2~3120 79~82,95,97~98
    13420 8vr4:A
    (2.8Å)
    		 3118 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02540
    RF02541
    RF02543
    RF00002    		 Mycolicibacterium
    smegmatis
    MC2
    155
    246196    		 39913204 Assembly1
    rna:B:1~118 976~978,1030,1032~1034
    13421 8vr4:B
    (2.8Å)
    		 118 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00001 Mycolicibacterium
    smegmatis
    MC2
    155
    246196    		 39913204 Assembly1
    rna:A:2~3120 79~82,94~98
    13422 8vr8:A
    (3.25Å)
    		 2950 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02540
    RF02541
    RF02543
    RF00002    		 Mycolicibacterium
    smegmatis
    MC2
    155
    246196    		 39913204 Assembly1
    rna:B:1~118 976~978,1030,1032~1033
    13423 8vr8:B
    (3.25Å)
    		 118 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00001 Mycolicibacterium
    smegmatis
    MC2
    155
    246196    		 39913204 Assembly1
    rna:A:2~3120 79~81,94~95,97~98
    13424 8vrl:A
    (3.33Å)
    		 3119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02540
    RF02541
    RF02543
    RF00002    		 Mycolicibacterium
    smegmatis
    MC2
    155
    246196    		 39913204 Assembly1
    rna:B:1~118 976~978,1030,1032~1034
    13425 8vrl:B
    (3.33Å)
    		 118 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00001 Mycolicibacterium
    smegmatis
    MC2
    155
    246196    		 39913204 Assembly1
    rna:A:2~3120 79~82,94~95,98
    13426 8vs9:16S
    (3.9Å)
    		 1539 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF01959
    RF00177
    RF02542
    RF01960    		 Escherichia
    coli
    562    		 38500588 Assembly1
    rna:23S:1~2903 702,784,899,1407~1409,1418,142
    0,1428~1429,1474~1475,1483~148
    4,1493~1496,1517
    rna:ATRN:1~76 530,1493
    rna:TMRN:1~363 1397,1492~1493
    13427 8vs9:23S
    (3.9Å)
    		 2903 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02541 Escherichia
    coli
    562    		 38500588 Assembly1
    rna:16S:2~1540 1689,1700~1701,1703~1704,1832,
    1837,1846,1848,1895,1912~1913,
    1916,1919~1920,1947~1948,1950,
    1959~1961
    rna:5S:1~120 861~864,915,917~919,958~959,23
    39~2340
    rna:ATRN:1~76 896,1913,2470,2482,2507~2508,2
    553,2555,2573,2583~2585
    rna:ETRN:1~76 1851~1852,2112~2113,2180~2181,
    2394~2395,2421~2422,2432
    rna:TMRN:1~363 885~888,890,2251~2253,2255,230
    7~2308,2439,2450~2451,2602
    13428 8vs9:5S
    (3.9Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00001 Escherichia
    coli
    562    		 38500588 Assembly1
    rna:23S:1~2903 41,78~81,89~90,97,99~100
    13429 8vs9:ATRN
    (3.9Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005F0912 RF00005 Escherichia
    coli
    562    		 38500588 Assembly1
    rna:16S:2~1540 35~37
    rna:23S:1~2903 37~38,52,56,63,74~76
    rna:TMRN:1~363 30~31,34~41
    13430 8vs9:ETRN
    (3.9Å)
    		 77 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Escherichia
    coli
    562    		 38500588 Assembly1
    rna:23S:1~2903 17A,19~20,71,75~76
    13431 8vs9:TMRN
    (3.9Å)
    		 363 GO:0006401 (P) RNA catabolic process URS000037602E RF00023 Escherichia
    coli
    562    		 38500588 Assembly1
    rna:16S:2~1540 90~91,93~94
    rna:23S:1~2903 3,25~26,59~61,75~76,361~363
    rna:ATRN:1~76 82~85,90~93
    13432 8vsa:16S
    (3.7Å)
    		 1539 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF01959
    RF00177
    RF02542
    RF01960    		 Escherichia
    coli
    562    		 38500588 Assembly1
    rna:23S:1~2903 702,784,899,1407~1409,1418,142
    8~1429,1473~1475,1483~1485,149
    3~1496,1517
    rna:TMRN:1~363 1397,1492~1493
    rna:ATRN:1~76 530,1493
    13433 8vsa:23S
    (3.7Å)
    		 2903 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02541 Escherichia
    coli
    562    		 38500588 Assembly1
    rna:5S:1~120 861~864,915~918,958
    rna:TMRN:1~363 885~886,888,890,2251~2253,2306
    ~2307,2439,2450~2451,2602
    rna:16S:2~1540 1689,1700~1704,1837,1846,1848,
    1895,1912~1916,1919~1920,1947~
    1948,1959~1961
    rna:ATRN:1~76 882,896,1913,2470,2482,2507~25
    08,2553,2555,2583~2585
    13434 8vsa:5S
    (3.7Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00001 Escherichia
    coli
    562    		 38500588 Assembly1
    rna:23S:1~2903 78~81,89,97,99~101
    13435 8vsa:ATRN
    (3.7Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005F0912 RF00005 Escherichia
    coli
    562    		 38500588 Assembly1
    rna:23S:1~2903 19~20,37~38,52,56,63,74~76
    rna:TMRN:1~363 30~31,34~37,39~41
    rna:16S:2~1540 35~37
    13436 8vsa:TMRN
    (3.7Å)
    		 363 GO:0006401 (P) RNA catabolic process URS000037602E RF00023 Escherichia
    coli
    562    		 38500588 Assembly1
    rna:23S:1~2903 3,25~26,60~61,75~76,361~363
    rna:16S:2~1540 90~91,93~94
    rna:ATRN:1~76 82~84,90~93
    13437 8vtu:1A
    (2.4Å)
    		 2871 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02541 Thermus
    thermophilus
    HB8
    300852    		 39039256 Assembly1
    rna:1B:1~120 861~863,915,917~919,958
    rna:1a:4~1533 1689,1700~1704,1832,1836~1837,
    1846,1848,1912~1916,1919~1920,
    1947~1948,1959~1961,2864
    rna:1w:1~76 882,897,1913,2482~2483,2506~25
    07,2553~2555,2583~2585,2602
    rna:1x:1~76 1907~1909,1922~1924,2251~2253,
    2439,2450~2451,2601~2602
    rna:1y:1~76 1885,2112,2169,2394~2395,2421~
    2422,2432
    13438 8vtu:1B
    (2.4Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00001 Thermus
    thermophilus
    HB8
    300852    		 39039256 Assembly1
    rna:1A:6~2897 78~81,90,97~98,100~101
    13439 8vtu:1a
    (2.4Å)
    		 1500 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00177
    RF01959
    RF02542
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 39039256 Assembly1
    rna:1A:6~2897 702,783~784,899,1407~1409,1418
    ,1429,1442A,1473~1475,1483~148
    4,1494~1496,1517
    rna:1v:12~24 530,926,1196,1397,1400~1401,14
    92~1493,1498,1503,1505,1507
    rna:1w:1~76 530,1054,1493
    rna:1x:1~76 790,966,1229~1230,1338~1341,14
    00
    13440 8vtu:1v
    (2.4Å)
    		 13 N/A N/A N/A Tequatrovirus
    T4
    10665    		 39039256 Assembly1
    rna:1a:4~1533 13,15~24
    rna:1w:1~76 19~21
    rna:1x:1~76 16~18
    13441 8vtu:1w
    (2.4Å)
    		 74 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Escherichia
    coli
    562    		 39039256 Assembly1
    rna:1A:6~2897 19,37~38,56,64,74~76
    rna:1a:4~1533 34~37
    rna:1v:12~24 34~37
    13442 8vtu:1x
    (2.4Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    562    		 39039256 Assembly1
    rna:1A:6~2897 11~13,24~25,74~76
    rna:1a:4~1533 29~32,34,38~41
    rna:1v:12~24 34~37
    13443 8vtu:1y
    (2.4Å)
    		 74 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Escherichia
    coli
    562    		 39039256 Assembly1
    rna:1A:6~2897 4,19,56,71,76
    13444 8vtu:2A
    (2.4Å)
    		 2800 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02541 Thermus
    thermophilus
    HB8
    300852    		 39039256 Assembly2
    rna:2B:1~120 861~864,915,917~919,958
    rna:2a:4~1532 1689,1700~1704,1832,1836~1837,
    1846,1848,1912~1916,1919~1920,
    1947~1949,1959~1961,2864
    rna:2w:2~76 897,1913,2482~2483,2506~2507,2
    553~2555,2583~2585,2602
    rna:2x:1~76 1907~1909,1922~1924,2251~2253,
    2439,2450~2451,2601~2602
    rna:2y:1~76 1851~1852,1885,2112,2169,2394~
    2395,2421~2422
    13445 8vtu:2B
    (2.4Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00001 Thermus
    thermophilus
    HB8
    300852    		 39039256 Assembly2
    rna:2A:6~2897 78~81,90,97~98,100~102
    13446 8vtu:2a
    (2.4Å)
    		 1503 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00177
    RF01959
    RF02542
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 39039256 Assembly2
    rna:2A:6~2897 702,783~784,899,1407~1409,1418
    ,1429,1442A,1473~1475,1483~148
    4,1494~1496,1517
    rna:2v:12~24 530,926,1196,1397,1400~1402,14
    92~1493,1498,1503,1505,1507
    rna:2w:2~76 530,1054,1493
    rna:2x:1~76 790,966,1229~1230,1338~1340,14
    00
    rna:2y:1~76 694~695
    13447 8vtu:2v
    (2.4Å)
    		 13 N/A N/A N/A Tequatrovirus
    T4
    10665    		 39039256 Assembly2
    rna:2a:4~1532 13,15~24
    rna:2w:2~76 19~21
    rna:2x:1~76 16~18
    13448 8vtu:2w
    (2.4Å)
    		 72 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Escherichia
    coli
    562    		 39039256 Assembly2
    rna:2A:6~2897 37~38,56,64,74~76
    rna:2a:4~1532 34~37
    rna:2v:12~24 34~37
    13449 8vtu:2x
    (2.4Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    562    		 39039256 Assembly2
    rna:2A:6~2897 11~13,24~25,74~76
    rna:2a:4~1532 30~32,34,38~41
    rna:2v:12~24 34~37
    13450 8vtu:2y
    (2.4Å)
    		 73 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Escherichia
    coli
    562    		 39039256 Assembly2
    rna:2A:6~2897 3,19,56,71~72,76
    rna:2x:1~76 35~36
    13451 8vtv:1A
    (2.55Å)
    		 2871 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02541 Thermus
    thermophilus
    HB8
    300852    		 39039256 Assembly1
    rna:1B:1~120 861~864,915,917~919,958
    rna:1a:4~1533 1689,1703~1704,1832,1836~1837,
    1846,1848,1912~1916,1919~1920,
    1947~1949,1959~1961,2864
    rna:1w:1~76 882,897,1913,2482~2483,2506~25
    07,2553~2555,2583~2585
    rna:1x:1~76 1907~1909,1922~1924,2251~2253,
    2439,2450~2451,2601~2602
    rna:1y:1~76 1851~1852,1885,2112,2169,2394~
    2395,2421~2422
    13452 8vtv:1B
    (2.55Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00001 Thermus
    thermophilus
    HB8
    300852    		 39039256 Assembly1
    rna:1A:6~2897 78~81,90,98,100~101
    13453 8vtv:1a
    (2.55Å)
    		 1500 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00177
    RF01959
    RF02542
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 39039256 Assembly1
    rna:1A:6~2897 702,783~784,899,1407~1409,1418
    ,1429,1442A,1474~1475,1483~148
    4,1494~1496,1517
    rna:1v:12~24 926,1196,1397,1400~1401,1492~1
    493,1498,1503,1505,1507
    rna:1w:1~76 530,1054,1493
    rna:1x:1~76 790,966,1229,1338~1340,1400
    13454 8vtv:1v
    (2.55Å)
    		 13 N/A N/A N/A Tequatrovirus
    T4
    10665    		 39039256 Assembly1
    rna:1a:4~1533 12~13,15~20,22~24
    rna:1w:1~76 19~21
    rna:1x:1~76 16~18
    13455 8vtv:1w
    (2.55Å)
    		 74 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Escherichia
    coli
    562    		 39039256 Assembly1
    rna:1A:6~2897 19,37~38,56,64,74~76
    rna:1a:4~1533 34~37
    rna:1v:12~24 34~37
    13456 8vtv:1x
    (2.55Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    562    		 39039256 Assembly1
    rna:1A:6~2897 11~13,24~25,74~76
    rna:1a:4~1533 29~32,34,38,40~41
    rna:1v:12~24 34~37
    13457 8vtv:1y
    (2.55Å)
    		 74 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Escherichia
    coli
    562    		 39039256 Assembly1
    rna:1A:6~2897 4,19,56,71,76
    13458 8vtv:2A
    (2.55Å)
    		 2800 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02541 Thermus
    thermophilus
    HB8
    300852    		 39039256 Assembly2
    rna:2B:1~120 861~863,915,917~919,958
    rna:2a:4~1532 1689,1700~1704,1832,1836~1837,
    1846,1848,1912~1916,1919~1920,
    1947~1949,1959~1961,2864
    rna:2w:2~76 897,1913,2482~2483,2506~2507,2
    553~2555,2583~2585,2602
    rna:2x:1~76 1907~1909,1922~1924,2251~2252,
    2439,2450~2451,2601~2602
    rna:2y:1~76 1851,1885,2112,2169,2394~2395,
    2421~2422
    13459 8vtv:2B
    (2.55Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00001 Thermus
    thermophilus
    HB8
    300852    		 39039256 Assembly2
    rna:2A:6~2897 78~81,90,97~98,100~101
    13460 8vtv:2a
    (2.55Å)
    		 1503 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00177
    RF01959
    RF02542
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 39039256 Assembly2
    rna:2A:6~2897 702,783~784,899,1407~1409,1418
    ,1429~1430,1442A,1473~1475,148
    3~1484,1494~1496,1517
    rna:2v:12~24 926,1196,1397,1400~1402,1492~1
    493,1498,1503,1505,1507
    rna:2w:2~76 530,1054,1493
    rna:2x:1~76 790,966,1229~1230,1338~1340,14
    00
    13461 8vtv:2v
    (2.55Å)
    		 13 N/A N/A N/A Tequatrovirus
    T4
    10665    		 39039256 Assembly2
    rna:2a:4~1532 12~13,15~20,22~24
    rna:2w:2~76 19~21
    rna:2x:1~76 16~18
    13462 8vtv:2w
    (2.55Å)
    		 72 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Escherichia
    coli
    562    		 39039256 Assembly2
    rna:2A:6~2897 37~38,56,64,74~76
    rna:2a:4~1532 34~37
    rna:2v:12~24 34~37
    13463 8vtv:2x
    (2.55Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    562    		 39039256 Assembly2
    rna:2A:6~2897 11~13,24~25,74~76
    rna:2a:4~1532 30~32,34,38~41
    rna:2v:12~24 34~37
    13464 8vtv:2y
    (2.55Å)
    		 73 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Escherichia
    coli
    562    		 39039256 Assembly2
    rna:2A:6~2897 3,19,56,76
    rna:2x:1~76 35~36
    13465 8vtw:1A
    (2.35Å)
    		 2872 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02541 Thermus
    thermophilus
    HB8
    300852    		 39039256 Assembly1
    rna:1B:1~120 861~864,915~919,958
    rna:1a:4~1533 1689,1700~1704,1832,1836~1837,
    1846,1848,1912~1916,1919~1920,
    1947~1948,1959~1961,2863~2864
    13466 8vtw:1B
    (2.35Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00001 Thermus
    thermophilus
    HB8
    300852    		 39039256 Assembly1
    rna:1A:6~2897 78~81,90,97~102
    13467 8vtw:1a
    (2.35Å)
    		 1500 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00177
    RF01959
    RF02542
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 39039256 Assembly1
    rna:1A:6~2897 702,784,899,1407~1409,1418,142
    9,1442A,1473~1475,1483~1484,14
    91~1496,1517
    13468 8vtw:2A
    (2.35Å)
    		 2867 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02541 Thermus
    thermophilus
    HB8
    300852    		 39039256 Assembly2
    rna:2B:1~120 861~864,915~919,958
    rna:2a:4~1533 1689,1700~1704,1832,1836~1837,
    1846,1848,1912~1916,1919~1920,
    1947~1948,1950,1959~1961,2863~
    2864
    13469 8vtw:2B
    (2.35Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00001 Thermus
    thermophilus
    HB8
    300852    		 39039256 Assembly2
    rna:2A:6~2897 78~81,90,97~98,100~102
    13470 8vtw:2a
    (2.35Å)
    		 1504 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00177
    RF01959
    RF02542
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 39039256 Assembly2
    rna:2A:6~2897 702,783~784,899,1407~1409,1418
    ,1420,1429~1430,1442A,1473~147
    5,1483~1484,1491~1496,1517
    13471 8vtx:1A
    (2.4Å)
    		 2871 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001698E8 RF02541 Thermus
    thermophilus
    HB8
    300852    		 39039256 Assembly1
    rna:1B:1~120 861~864,915,917~919,958
    rna:1a:4~1533 1689,1700~1704,1832,1836~1837,
    1846,1848,1912~1916,1919~1920,
    1947~1949,1959~1961,2863~2864
    rna:1w:1~76 882,897,1913,2482~2483,2506~25
    07,2553~2555,2583~2585,2602
    rna:1x:1~76 1907~1909,1922~1924,2251~2253,
    2439,2450~2451,2601~2602
    rna:1y:1~76 1851,1885,2112,2169,2394~2395,
    2421~2422
    13472 8vtx:1B
    (2.4Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00001 Thermus
    thermophilus
    HB8
    300852    		 39039256 Assembly1
    rna:1A:6~2897 78~81,90,98,100~102
    13473 8vtx:1a
    (2.4Å)
    		 1500 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00177
    RF01959
    RF02542
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 39039256 Assembly1
    rna:1A:6~2897 702,783~784,899~900,1407~1409,
    1418,1429~1430,1442A,1473~1475
    ,1483~1484,1494~1496,1517
    rna:1v:12~24 530,926,1196,1397,1400~1401,14
    92~1493,1498,1503,1505,1507
    rna:1w:1~76 530,1054,1493
    rna:1x:1~76 790,966,1229~1230,1338~1341,14
    00
    13474 8vtx:1v
    (2.4Å)
    		 13 N/A N/A N/A Tequatrovirus
    T4
    10665    		 39039256 Assembly1
    rna:1a:4~1533 12~13,15~24
    rna:1w:1~76 19~21
    rna:1x:1~76 16~18
    13475 8vtx:1w
    (2.4Å)
    		 74 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Escherichia
    coli
    562    		 39039256 Assembly1
    rna:1A:6~2897 19,37~38,56,64,74~76
    rna:1a:4~1533 34~37
    rna:1v:12~24 34~37
    13476 8vtx:1x
    (2.4Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    562    		 39039256 Assembly1
    rna:1A:6~2897 11~13,24~25,74~76
    rna:1a:4~1533 29~32,34,38~41
    rna:1v:12~24 34~37
    13477 8vtx:1y
    (2.4Å)
    		 74 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Escherichia
    coli
    562    		 39039256 Assembly1
    rna:1A:6~2897 19,56,71,76
    13478 8vtx:2A
    (2.4Å)
    		 2800 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001698E8 RF02541 Thermus
    thermophilus
    HB8
    300852    		 39039256 Assembly2
    rna:2B:1~120 861~864,915~919,958
    rna:2a:4~1532 1689,1700~1704,1832,1836~1837,
    1846,1848,1912~1916,1919~1920,
    1947~1949,1959~1961,2864
    rna:2w:2~76 896~897,1913,2482~2483,2506~25
    07,2553~2555,2583~2585,2602
    rna:2x:1~76 1907~1909,1922~1924,2251~2253,
    2439,2450~2451,2601~2602
    rna:2y:1~76 1851,1885,2112,2169,2394~2395,
    2421~2422
    13479 8vtx:2B
    (2.4Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00001 Thermus
    thermophilus
    HB8
    300852    		 39039256 Assembly2
    rna:2A:6~2897 78~81,90,97~98,100~102
    13480 8vtx:2a
    (2.4Å)
    		 1503 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00177
    RF01959
    RF02542
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 39039256 Assembly2
    rna:2A:6~2897 702,783~784,899,1407~1409,1418
    ,1429,1442A,1473~1475,1483~148
    4,1494~1496,1517
    rna:2v:12~24 926,1196,1397,1400~1402,1492~1
    493,1498,1503,1505,1507
    rna:2w:2~76 530,1054,1493
    rna:2x:1~76 790,966,1229~1230,1338~1340,14
    00
    13481 8vtx:2v
    (2.4Å)
    		 13 N/A N/A N/A Tequatrovirus
    T4
    10665    		 39039256 Assembly2
    rna:2a:4~1532 12~13,15~20,22~24
    rna:2w:2~76 19~21
    rna:2x:1~76 16~18
    13482 8vtx:2w
    (2.4Å)
    		 72 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Escherichia
    coli
    562    		 39039256 Assembly2
    rna:2A:6~2897 37~38,56,64,74~76
    rna:2a:4~1532 34~37
    rna:2v:12~24 34~37
    13483 8vtx:2x
    (2.4Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    562    		 39039256 Assembly2
    rna:2A:6~2897 11~13,24~25,74~76
    rna:2a:4~1532 30~32,34,38~41
    rna:2v:12~24 34~37
    13484 8vtx:2y
    (2.4Å)
    		 73 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Escherichia
    coli
    562    		 39039256 Assembly2
    rna:2A:6~2897 3~4,19,56,71~72,76
    13485 8vty:1A
    (2.6Å)
    		 2872 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02541 Thermus
    thermophilus
    HB8
    300852    		 39039256 Assembly1
    rna:1B:1~120 861~864,915,917~919,958
    rna:1a:4~1533 1689,1700~1704,1832,1837,1846,
    1848,1912~1916,1919~1920,1947~
    1948,1959~1961,2863~2864
    13486 8vty:1B
    (2.6Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00001 Thermus
    thermophilus
    HB8
    300852    		 39039256 Assembly1
    rna:1A:6~2897 78~81,90,97~98,100~102
    13487 8vty:1a
    (2.6Å)
    		 1500 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00177
    RF01959
    RF02542
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 39039256 Assembly1
    rna:1A:6~2897 702,784,899,1407~1409,1418,142
    9,1442A,1473~1475,1483~1484,14
    91~1496,1517
    13488 8vty:2A
    (2.6Å)
    		 2867 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02541 Thermus
    thermophilus
    HB8
    300852    		 39039256 Assembly2
    rna:2B:1~120 861~864,915,917~919,958
    rna:2a:4~1533 1689,1700~1701,1703~1704,1832,
    1836~1837,1846,1848,1912~1916,
    1919~1920,1947~1948,1959~1961,
    2863~2864
    13489 8vty:2B
    (2.6Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00001 Thermus
    thermophilus
    HB8
    300852    		 39039256 Assembly2
    rna:2A:6~2897 78~81,90,97~98,100~102
    13490 8vty:2a
    (2.6Å)
    		 1504 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00177
    RF01959
    RF02542
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 39039256 Assembly2
    rna:2A:6~2897 702,783~784,899,1407~1409,1418
    ,1429,1442A,1474~1475,1483~148
    4,1491~1496,1517
    13491 8vxx:A
    (3.1Å)
    		 36 N/A URS0000D77919 N/A synthetic
    construct
    32630    		 N/A Assembly1
    rna:B:1~36 8,30~32
    13492 8vxx:B
    (3.1Å)
    		 36 N/A URS0000D77919 N/A synthetic
    construct
    32630    		 N/A Assembly1
    rna:A:1~36 28,30~32
    rna:C:1~36 8~10,14~15,19~20,25~26
    13493 8vxx:C
    (3.1Å)
    		 36 N/A URS0000D77919 N/A synthetic
    construct
    32630    		 N/A Assembly1
    rna:B:1~36 8~10,14~16,19~20,25~26
    13494 8vxz:A
    (3.0Å)
    		 36 N/A URS0000D77919 N/A synthetic
    construct
    32630    		 N/A Assembly1
    rna:B:1~36 28,30~31
    13495 8vxz:B
    (3.0Å)
    		 36 N/A URS0000D77919 N/A synthetic
    construct
    32630    		 N/A Assembly1
    rna:A:1~36 8,30~31
    rna:C:1~36 8,10,14~15,19~20,25~26
    13496 8vxz:C
    (3.0Å)
    		 36 N/A URS0000D77919 N/A synthetic
    construct
    32630    		 N/A Assembly1
    rna:B:1~36 8,10,14~15,19~20,25~26
    13497 8vy0:A
    (3.1Å)
    		 36 N/A URS0000D77919 N/A synthetic
    construct
    32630    		 N/A Assembly1
    rna:B:1~36 8,28,30~31
    13498 8vy0:B
    (3.1Å)
    		 36 N/A URS0000D77919 N/A synthetic
    construct
    32630    		 N/A Assembly1
    rna:A:1~36 8,28,30~31
    rna:C:1~36 8,10,14~15,19~20,25~26
    13499 8vy0:C
    (3.1Å)
    		 36 N/A URS0000D77919 N/A synthetic
    construct
    32630    		 N/A Assembly1
    rna:B:1~36 8,10,14~15,19~20,25~26
    13500 8vy1:A
    (3.1Å)
    		 36 N/A URS0000D77919 N/A synthetic
    construct
    32630    		 N/A Assembly1
    rna:B:1~36 30~31
    << < 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 > >>
    Go to page

    Reference:
  • Chengxin Zhang, P. Lydia Freddolino (2023) FURNA: a database for function annotations of RNA structures, bioRxiv 2023.12.19.572314.

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