SEQ2FUN

FURNA
Download all results in tab-seperated text for 16611 RNAs.
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  • Hover over Ligand to view the name of the ligand and the ligand-binding nucleotides on the RNA.

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    # PDB
    (Resolution)    		 Length EC number
    & GO term     		RNAcentral Rfam Taxon PubMed ATtRACT
    motif     		Ligand &
    binding nucleotides
    13601 8vtx:1x
    (2.4Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    562    		 39039256 Assembly1
    rna:1A:6~2897 11~13,24~25,74~76
    rna:1a:4~1533 29~32,34,38~41
    rna:1v:12~24 34~37
    13602 8vtx:1y
    (2.4Å)
    		 74 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    562    		 39039256 Assembly1
    rna:1A:6~2897 19,56,71,76
    13603 8vtx:2A
    (2.4Å)
    		 2800 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001698E8 RF02541 Thermus
    thermophilus
    HB8
    300852    		 39039256 Assembly2
    rna:2B:1~120 861~864,915~919,958
    rna:2a:4~1532 1689,1700~1704,1832,1836~1837,
    1846,1848,1912~1916,1919~1920,
    1947~1949,1959~1961,2864
    rna:2w:2~76 896~897,1913,2482~2483,2506~25
    07,2553~2555,2583~2585,2602
    rna:2x:1~76 1907~1909,1922~1924,2251~2253,
    2439,2450~2451,2601~2602
    rna:2y:1~76 1851,1885,2112,2169,2394~2395,
    2421~2422
    13604 8vtx:2B
    (2.4Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DEE8 RF00001 Thermus
    thermophilus
    HB8
    300852    		 39039256 Assembly2
    rna:2A:6~2897 78~81,90,97~98,100~102
    13605 8vtx:2a
    (2.4Å)
    		 1503 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DFED RF00177 Thermus
    thermophilus
    HB8
    300852    		 39039256 Assembly2
    rna:2A:6~2897 702,783~784,899,1407~1409,1418
    ,1429,1442A,1473~1475,1483~148
    4,1494~1496,1517
    rna:2v:12~24 926,1196,1397,1400~1402,1492~1
    493,1498,1503,1505,1507
    rna:2w:2~76 530,1054,1493
    rna:2x:1~76 790,966,1229~1230,1338~1340,14
    00
    13606 8vtx:2v
    (2.4Å)
    		 13 N/A N/A N/A Tequatrovirus
    T4
    10665    		 39039256 Assembly2
    rna:2a:4~1532 12~13,15~20,22~24
    rna:2w:2~76 19~21
    rna:2x:1~76 16~18
    13607 8vtx:2w
    (2.4Å)
    		 72 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    562    		 39039256 Assembly2
    rna:2A:6~2897 37~38,56,64,74~76
    rna:2a:4~1532 34~37
    rna:2v:12~24 34~37
    13608 8vtx:2x
    (2.4Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    562    		 39039256 Assembly2
    rna:2A:6~2897 11~13,24~25,74~76
    rna:2a:4~1532 30~32,34,38~41
    rna:2v:12~24 34~37
    13609 8vtx:2y
    (2.4Å)
    		 73 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    562    		 39039256 Assembly2
    rna:2A:6~2897 3~4,19,56,71~72,76
    13610 8vty:1A
    (2.6Å)
    		 2872 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001698E8 RF02541 Thermus
    thermophilus
    HB8
    300852    		 39039256 Assembly1
    rna:1B:1~120 861~864,915,917~919,958
    rna:1a:4~1533 1689,1700~1704,1832,1837,1846,
    1848,1912~1916,1919~1920,1947~
    1948,1959~1961,2863~2864
    13611 8vty:1B
    (2.6Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DEE8 RF00001 Thermus
    thermophilus
    HB8
    300852    		 39039256 Assembly1
    rna:1A:6~2897 78~81,90,97~98,100~102
    13612 8vty:1a
    (2.6Å)
    		 1500 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DFED RF00177 Thermus
    thermophilus
    HB8
    300852    		 39039256 Assembly1
    rna:1A:6~2897 702,784,899,1407~1409,1418,142
    9,1442A,1473~1475,1483~1484,14
    91~1496,1517
    13613 8vty:2A
    (2.6Å)
    		 2867 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001698E8 RF02541 Thermus
    thermophilus
    HB8
    300852    		 39039256 Assembly2
    rna:2B:1~120 861~864,915,917~919,958
    rna:2a:4~1533 1689,1700~1701,1703~1704,1832,
    1836~1837,1846,1848,1912~1916,
    1919~1920,1947~1948,1959~1961,
    2863~2864
    13614 8vty:2B
    (2.6Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DEE8 RF00001 Thermus
    thermophilus
    HB8
    300852    		 39039256 Assembly2
    rna:2A:6~2897 78~81,90,97~98,100~102
    13615 8vty:2a
    (2.6Å)
    		 1504 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DFED RF00177 Thermus
    thermophilus
    HB8
    300852    		 39039256 Assembly2
    rna:2A:6~2897 702,783~784,899,1407~1409,1418
    ,1429,1442A,1474~1475,1483~148
    4,1491~1496,1517
    13616 8vup:1
    (3.4Å)
    		 2903 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02541 Escherichia
    coli
    562    		 N/A Assembly1
    rna:2:2~1540 1701,1703~1704,1836~1837,1846,
    1848,1912~1916,1919~1920,1947~
    1948,1959~1961
    rna:3:1~120 861~864,915,917~919,958
    rna:5:1~76 1850~1851,1892~1893,2112,2168,
    2394,2421~2422,2432
    13617 8vup:2
    (3.4Å)
    		 1539 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00177 Escherichia
    coli
    562    		 N/A Assembly1
    rna:1:1~2903 702,784,1407~1409,1418,1429,14
    74,1483~1484,1491~1495,1517
    rna:5:1~76 789,966,1229,1338~1340
    13618 8vup:3
    (3.4Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00001 Escherichia
    coli
    562    		 N/A Assembly1
    rna:1:1~2903 78~81,89~90,96~97,99~100
    13619 8vup:5
    (3.4Å)
    		 77 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Escherichia
    coli
    562    		 N/A Assembly1
    rna:1:1~2903 2,19,56,70~71,75~76
    rna:2:2~1540 30~32,34,37,40~41
    rna:4:13~16 34~37
    13620 8vv4:1
    (3.4Å)
    		 2821 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02541 Escherichia
    coli
    562    		 N/A Assembly1
    rna:2:1~1534 1701,1703,1846~1847,1912~1913,
    1916,1919~1920,1947~1948,1959~
    1960
    rna:3:1~120 861~863,917~919,958
    rna:5:1~76 1923,2063,2251~2253,2255,2451,
    2601
    13621 8vv4:2
    (3.4Å)
    		 1534 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00177 Escherichia
    coli
    562    		 N/A Assembly1
    rna:1:1~2903 702,1407~1409,1418,1429,1474,1
    483~1484,1492,1494~1495,1517
    rna:4:12~18 693,926,1400,1403,1498
    rna:5:1~76 790,966,1229~1230,1338~1340,14
    00
    13622 8vv4:3
    (3.4Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00001 Escherichia
    coli
    562    		 N/A Assembly1
    rna:1:1~2903 78~81,89,99~100
    13623 8vv4:5
    (3.4Å)
    		 77 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Escherichia
    coli
    562    		 N/A Assembly1
    rna:1:1~2903 3,12,24,74~76
    rna:2:1~1534 30~31,34,38~41
    rna:4:12~18 34~37
    13624 8vvj:A
    (2.15Å)
    		 64 GO:0006730 (P) one-carbon metabolic pr...
    GO:1900371 (P) regulation of purine nu...    		 URS0000868555 RF01750 Schaalia
    odontolytica
    1660    		 40310613 Assembly1
    rna:A-2:1~64 9~15,19~20,28,34~39,49~63
    13625 8vvp:SA
    (2.9Å)
    		 76 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Bos
    taurus
    9913    		 N/A Assembly1
    rna:VA:15~26 34~35,37
    rna:WA:1~5071 2,12,24,74~76
    rna:ZA:1~1869 30~32,34,38~41
    13626 8vvp:TA
    (2.9Å)
    		 76 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Bos
    taurus
    9913    		 N/A Assembly1
    rna:VA:15~26 35~36
    rna:WA:1~5071 3~4,70~71,75~76
    rna:ZA:1~1869 34~36
    13627 8vvp:UA
    (2.9Å)
    		 75 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Bos
    taurus
    9913    		 N/A Assembly1
    rna:VA:15~26 34~35
    rna:WA:1~5071 18,56
    rna:ZA:1~1869 34,36~37
    13628 8vvp:VA
    (2.9Å)
    		 12 N/A N/A N/A Lampyridae
    7049    		 N/A Assembly1
    rna:SA:1~76 19~21
    rna:UA:2~76 23~24
    rna:ZA:1~1869 16~22,25~26
    13629 8vvp:WA
    (2.9Å)
    		 3578 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02543 Oryctolagus
    cuniculus
    9986    		 N/A Assembly1
    rna:SA:1~76 3757,3772~3773,4198~4200,4202,
    4398~4399,4533,4550
    rna:TA:1~76 3716~3717,3741~3742,4343~4344,
    4372~4373
    rna:UA:2~76 1983,2011
    rna:XA:1~119 1738~1741,1743,1794,1796~1798,
    1896,1911,1938,1944
    rna:YA:1~156 1~11,13~22,58,146,339,341~348,
    350~353,356~357,360,362,379~38
    0,415~430,1306~1307,1335~1336,
    1373,2310~2311,2314~2315,2335~
    2336,2357,2446,2474,2488,2495,
    2510~2511,2544~2546,2780~2781,
    3892
    rna:ZA:1~1869 1565~1567,2869,2886~2887,3631,
    3714,3761~3763,3765,3768~3769,
    3796~3798,3808~3810,3836
    13630 8vvp:XA
    (2.9Å)
    		 119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00001 Oryctolagus
    cuniculus
    9986    		 N/A Assembly1
    rna:WA:1~5071 77~80,84,88,98,100~103
    13631 8vvp:YA
    (2.9Å)
    		 156 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00002 Oryctolagus
    cuniculus
    9986    		 N/A Assembly1
    rna:WA:1~5071 3~22,24~37,40~41,53~54,103,108
    ,112~113,115,123,125~127,136,1
    38~149,151,153~156
    13632 8vvp:ZA
    (2.9Å)
    		 1716 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF01960 Oryctolagus
    cuniculus
    9986    		 N/A Assembly1
    rna:SA:1~76 1058,1248,1524~1525,1639~1641,
    1701
    rna:TA:1~76 1217~1218,1641,1684
    rna:UA:2~76 1331,1825
    rna:VA:15~26 961,1056~1057,1207,1698,1701,1
    704,1825,1830
    rna:WA:1~5071 368,677~678,970,1028~1030,1180
    ,1708~1710,1719~1721,1731,1815
    ~1816,1824,1826~1828,1849
    13633 8vvq:SA
    (2.7Å)
    		 76 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Bos
    taurus
    9913    		 N/A Assembly1
    rna:VA:15~26 34~37
    rna:WA:1~5071 2,12,24~25,74~76
    rna:ZA:1~1869 30~32,34,38~41
    13634 8vvq:TA
    (2.7Å)
    		 76 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Bos
    taurus
    9913    		 N/A Assembly1
    rna:VA:15~26 35~36
    rna:WA:1~5071 3~4,70~71,75~76
    13635 8vvq:UA
    (2.7Å)
    		 75 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Bos
    taurus
    9913    		 N/A Assembly1
    rna:VA:15~26 34~35
    rna:WA:1~5071 18,56
    rna:ZA:1~1869 34,36~37
    13636 8vvq:VA
    (2.7Å)
    		 12 N/A N/A N/A Lampyridae
    7049    		 N/A Assembly1
    rna:SA:1~76 19~21
    rna:UA:2~76 23~24
    rna:ZA:1~1869 16,18~22,25~26
    13637 8vvq:WA
    (2.7Å)
    		 3578 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02543 Oryctolagus
    cuniculus
    9986    		 N/A Assembly1
    rna:SA:1~76 3771~3772,4198~4200,4202,4398~
    4399,4550
    rna:TA:1~76 3716~3717,3741~3742,4343~4344,
    4372~4373
    rna:UA:2~76 1983,2011
    rna:XA:1~119 1738~1741,1743,1794~1798,1896,
    1911,1938,1944
    rna:YA:1~156 1~22,58,146,339,341~348,350~35
    3,356~357,360,362,379~380,415~
    430,1306~1307,1335~1336,1373,2
    310~2311,2314~2315,2335~2336,2
    357,2446,2474,2495,2510,2545~2
    546,2780~2781,3892
    rna:ZA:1~1869 1565~1566,2869,2886~2887,3631,
    3714,3761~3765,3768~3769,3796~
    3798,3808~3810
    13638 8vvq:XA
    (2.7Å)
    		 119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00001 Oryctolagus
    cuniculus
    9986    		 N/A Assembly1
    rna:WA:1~5071 77~80,84,88,98,100~103
    13639 8vvq:YA
    (2.7Å)
    		 156 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00002 Oryctolagus
    cuniculus
    9986    		 N/A Assembly1
    rna:WA:1~5071 3~22,24~37,40,53~54,103,108,11
    0,112~113,115,123,126~127,136,
    138~149,151~156
    13640 8vvq:ZA
    (2.7Å)
    		 1716 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF01960 Oryctolagus
    cuniculus
    9986    		 N/A Assembly1
    rna:SA:1~76 1058,1248,1524~1525,1639~1641,
    1701
    rna:TA:1~76 1217~1218,1641~1642
    rna:UA:2~76 1331,1825
    rna:VA:15~26 961,1207,1698,1701,1825,1830
    rna:WA:1~5071 368,677~678,970,1028~1029,1180
    ,1708~1710,1719~1721,1731,1815
    ~1816,1824,1826~1828,1849
    13641 8vvr:SA
    (3.1Å)
    		 76 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Bos
    taurus
    9913    		 N/A Assembly1
    rna:VA:15~26 34~37
    rna:WA:1~5071 12,24~25,74~76
    rna:ZA:1~1869 30~32,34,38~41
    13642 8vvr:TA
    (3.1Å)
    		 76 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Bos
    taurus
    9913    		 N/A Assembly1
    rna:WA:1~5071 3~4,70~71,75~76
    rna:ZA:1~1869 34~36
    13643 8vvr:UA
    (3.1Å)
    		 75 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Bos
    taurus
    9913    		 N/A Assembly1
    rna:VA:15~26 34~36
    rna:WA:1~5071 18,53~54,56,62~63
    rna:ZA:1~1869 36~37
    13644 8vvr:VA
    (3.1Å)
    		 12 N/A N/A N/A Lampyridae
    7049    		 N/A Assembly1
    rna:SA:1~76 19~21
    rna:UA:2~76 22~24
    rna:ZA:1~1869 16~22,24,26
    13645 8vvr:WA
    (3.1Å)
    		 3578 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02543 Oryctolagus
    cuniculus
    9986    		 N/A Assembly1
    rna:SA:1~76 3771~3772,3911~3912,4198~4200,
    4398~4399,4550
    rna:TA:1~76 3716~3717,3741~3742,4343~4344,
    4372~4373
    rna:UA:2~76 4421,4607~4609
    rna:XA:1~119 1738~1741,1743,1794~1798,1911,
    1938,1944
    rna:YA:1~156 1~22,58,146,339,341~348,350~35
    3,356~357,360,362,379~380,415~
    430,1307,1335~1336,1373,2310~2
    311,2314,2335~2336,2446,2474,2
    488,2495~2496,2510~2511,2544,2
    546,2780~2781,3892,4164
    rna:ZA:1~1869 1565~1567,2886~2887,3631,3696,
    3714,3761~3763,3765,3768~3769,
    3796~3798,3808~3809,3836
    13646 8vvr:XA
    (3.1Å)
    		 119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00001 Oryctolagus
    cuniculus
    9986    		 N/A Assembly1
    rna:WA:1~5071 77~80,84,88,98,100~104
    13647 8vvr:YA
    (3.1Å)
    		 156 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00002 Oryctolagus
    cuniculus
    9986    		 N/A Assembly1
    rna:WA:1~5071 3~22,24~37,40,53~54,103,108,11
    2~113,115,123,125~127,136,138~
    156
    13648 8vvr:ZA
    (3.1Å)
    		 1716 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF01960 Oryctolagus
    cuniculus
    9986    		 N/A Assembly1
    rna:SA:1~76 1058,1248,1524~1525,1639~1641,
    1701
    rna:TA:1~76 1218,1641~1642
    rna:VA:15~26 626,961,1056~1057,1207,1698,17
    01~1702,1704,1825,1830
    rna:WA:1~5071 677~678,970,1028~1030,1180,170
    8~1710,1719~1721,1731,1815~181
    6,1824~1827,1849
    13649 8vvs:SA
    (3.1Å)
    		 76 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Bos
    taurus
    9913    		 N/A Assembly1
    rna:VA:15~26 34~37
    rna:WA:1~5071 12,24~25,74~76
    rna:ZA:1~1869 30~32,34,38~41
    13650 8vvs:TA
    (3.1Å)
    		 76 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Bos
    taurus
    9913    		 N/A Assembly1
    rna:WA:1~5071 3~4,70~71,75~76
    rna:ZA:1~1869 34~36
    13651 8vvs:UA
    (3.1Å)
    		 75 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Bos
    taurus
    9913    		 N/A Assembly1
    rna:VA:15~26 34~36
    rna:WA:1~5071 18,53~54,56,62~63
    rna:ZA:1~1869 36~37
    13652 8vvs:VA
    (3.1Å)
    		 12 N/A N/A N/A Lampyridae
    7049    		 N/A Assembly1
    rna:SA:1~76 19~21
    rna:UA:2~76 22~24
    rna:ZA:1~1869 16~22,24,26
    13653 8vvs:WA
    (3.1Å)
    		 3578 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02543 Oryctolagus
    cuniculus
    9986    		 N/A Assembly1
    rna:SA:1~76 3771~3772,3911~3912,4198~4200,
    4398~4399,4533,4550
    rna:TA:1~76 3716~3717,3741~3742,4343~4344,
    4372~4373
    rna:UA:2~76 4421,4607~4609
    rna:XA:1~119 1738~1741,1743,1794~1798,1911,
    1938,1944
    rna:YA:1~156 1~22,58,146,339,341~348,350~35
    3,356~357,360,362,379~380,415~
    430,1307,1335~1336,1373,2310~2
    311,2314~2315,2335~2336,2446,2
    474,2488,2495~2496,2510~2511,2
    544,2546,2780~2781,3892,4164
    rna:ZA:1~1869 1565~1567,2886~2887,3631,3696,
    3714,3761~3763,3765,3768~3769,
    3796~3798,3808~3810,3836
    13654 8vvs:XA
    (3.1Å)
    		 119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00001 Oryctolagus
    cuniculus
    9986    		 N/A Assembly1
    rna:WA:1~5071 77~80,84,88,98,100~104
    13655 8vvs:YA
    (3.1Å)
    		 156 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00002 Oryctolagus
    cuniculus
    9986    		 N/A Assembly1
    rna:WA:1~5071 3~22,24~37,40,53~54,103,108,11
    2~113,115,123,125~127,136,138~
    156
    13656 8vvs:ZA
    (3.1Å)
    		 1716 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF01960 Oryctolagus
    cuniculus
    9986    		 N/A Assembly1
    rna:SA:1~76 1058,1248,1524~1525,1639~1641,
    1701
    rna:TA:1~76 1218,1641~1642
    rna:VA:15~26 626,961,1056~1057,1207,1698,17
    01~1702,1704,1825,1830
    rna:WA:1~5071 677~678,970,1028~1030,1180,170
    8~1710,1719~1721,1731,1815~181
    6,1824~1827,1849
    13657 8vvt:WA
    (2.9Å)
    		 3541 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02543 Oryctolagus
    cuniculus
    9986    		 N/A Assembly1
    rna:XA:1~120 1741~1744,1746,1797~1801,1899,
    1914,1941,1947~1948
    rna:YA:1~156 1~11,13~22,58,146,339,341~348,
    350~353,355~357,360,362,379~38
    0,415~430,1310~1311,1339~1340,
    1377,2313~2314,2338~2339,2360,
    2449,2477,2498,2513~2514,2547~
    2549,2783~2784
    rna:ZA:1~1869 1568~1570,2889,3634,3714~3715,
    3764~3765,3767~3768,3771~3772,
    3799~3801,3811~3813
    13658 8vvt:XA
    (2.9Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00001 Oryctolagus
    cuniculus
    9986    		 N/A Assembly1
    rna:WA:1~5074 77~80,84,88,98,100~104
    13659 8vvt:YA
    (2.9Å)
    		 151 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00002 Oryctolagus
    cuniculus
    9986    		 N/A Assembly1
    rna:WA:1~5074 4~22,24~37,40,53~54,103,108,11
    1~113,115,126~128,136,138~149,
    151~156
    13660 8vvt:ZA
    (2.9Å)
    		 1698 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000E60BB4 RF01960 Oryctolagus
    cuniculus
    9986    		 N/A Assembly1
    rna:WA:1~5074 677~678,970,1028~1030,1708~171
    0,1719~1721,1731,1815~1816,182
    6~1828,1849
    13661 8vvu:At
    (3.8Å)
    		 74 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Bos
    taurus
    9913    		 N/A Assembly1
    rna:VA:15~26 35~36
    rna:WA:1~5071 19,38
    rna:ZA:1~1869 34~37
    13662 8vvu:SA
    (3.8Å)
    		 76 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Bos
    taurus
    9913    		 N/A Assembly1
    rna:VA:15~26 34~37
    rna:WA:1~5071 2,12,74~76
    rna:ZA:1~1869 30~32,34,38~39,41
    13663 8vvu:TA
    (3.8Å)
    		 76 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Oryctolagus
    cuniculus
    9986    		 N/A Assembly1
    rna:WA:1~5071 3~4,70~71,75~76
    rna:ZA:1~1869 34~36
    13664 8vvu:VA
    (3.8Å)
    		 12 N/A N/A N/A Lampyridae
    7049    		 N/A Assembly1
    rna:SA:1~76 19~21
    rna:ZA:1~1869 16~23,25~26
    rna:At:1~74 22~23
    13665 8vvu:WA
    (3.8Å)
    		 3578 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02543 Oryctolagus
    cuniculus
    9986    		 N/A Assembly1
    rna:SA:1~76 3772,3911,4198~4200,4202,4398~
    4399,4533,4550
    rna:TA:1~76 3716~3717,4343~4344,4372~4373
    rna:XA:1~119 1738~1740,1743,1794~1797,1911,
    1938,1944~1945
    rna:YA:1~156 1~11,13~22,58,146,339,341~348,
    350~353,356~357,360,362,379~38
    0,415~430,1306~1307,1335~1336,
    1373,2310~2311,2314~2315,2335~
    2336,2446~2447,2474,2488,2495,
    2510,2512,2545~2546,2780~2782
    rna:ZA:1~1869 1566~1567,2886,3631,3714,3761,
    3763,3765,3768~3769,3796~3798,
    3808~3809,3836
    rna:At:1~74 1763,3762
    13666 8vvu:XA
    (3.8Å)
    		 119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00001 Oryctolagus
    cuniculus
    9986    		 N/A Assembly1
    rna:WA:1~5071 77~79,84,88,98,100~101,103~104
    13667 8vvu:YA
    (3.8Å)
    		 156 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00002 Oryctolagus
    cuniculus
    9986    		 N/A Assembly1
    rna:WA:1~5071 4~22,24~37,40,53~54,103,108,11
    0,112~113,115~116,123,125,127,
    138~149,151~156
    13668 8vvu:ZA
    (3.8Å)
    		 1716 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF01960 Oryctolagus
    cuniculus
    9986    		 N/A Assembly1
    rna:SA:1~76 1058,1248,1524~1525,1639,1641,
    1701
    rna:TA:1~76 1217~1218,1641,1684
    rna:VA:15~26 961,1056~1057,1207,1698,1701~1
    702,1824~1825,1830
    rna:WA:1~5071 970,1030,1708~1710,1719~1721,1
    731,1815~1816,1826~1827,1849
    rna:At:1~74 626~627,1331,1824~1825
    13669 8vvv:5
    (3.1Å)
    		 3529 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02543 Oryctolagus
    cuniculus
    9986    		 N/A Assembly1
    rna:7:1~120 1742~1744,1747,1798~1802,1900,
    1915,1942,1948~1949
    rna:8:1~156 1~22,58,146~147,339,341~348,35
    0~354,356~357,360,362,379~380,
    415~430,1310~1311,1339~1340,13
    77,2314~2315,2319,2339~2340,23
    61~2362,2450,2478,2493,2499,25
    14~2515,2548~2550,2784~2786,41
    68
    rna:9:1~1869 1569~1571,2890,3706,3717,3765~
    3767,3769,3772~3773,3800~3802,
    3812~3813,3840
    13670 8vvv:7
    (3.1Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00001 Oryctolagus
    cuniculus
    9986    		 N/A Assembly1
    rna:5:1~5075 77~80,84,88,98,100~101,103~104
    13671 8vvv:8
    (3.1Å)
    		 151 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00002 Oryctolagus
    cuniculus
    9986    		 N/A Assembly1
    rna:5:1~5075 4~22,24~37,40,53~54,103,108,11
    0~113,115,126~128,135,137~156
    13672 8vvv:9
    (3.1Å)
    		 1697 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF01960 Oryctolagus
    cuniculus
    9986    		 N/A Assembly1
    rna:5:1~5075 677~678,970,1028~1030,1052,118
    0,1708~1710,1719~1721,1731,181
    5~1816,1824~1828,1849
    13673 8vwq:1
    (3.1Å)
    		 2869 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02541 Escherichia
    coli
    562    		 N/A Assembly1
    rna:2:1~1533 1700~1704,1832,1837,1846,1848,
    1912~1916,1919~1920,1947~1949,
    1959~1961
    rna:3:1~120 861~864,915,917~918,958,2339~2
    340
    rna:5:1~76 1907~1909,1922~1923,2064,2251~
    2253,2255,2450~2451,2602
    13674 8vwq:2
    (3.1Å)
    		 1533 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000081169C RF00177 Escherichia
    coli
    562    		 N/A Assembly1
    rna:1:1~2903 702,784,899,1407~1409,1418~141
    9,1429,1473~1475,1483~1484,149
    2,1494~1496,1517
    rna:4:12~19 693,926,1400~1401,1493,1498
    rna:5:1~76 790,966,1229~1230,1338~1340,14
    00
    13675 8vwq:3
    (3.1Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00001 Escherichia
    coli
    562    		 N/A Assembly1
    rna:1:1~2903 41,78~80,89,96~97,99~100
    13676 8vwq:5
    (3.1Å)
    		 77 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Escherichia
    coli
    562    		 N/A Assembly1
    rna:1:1~2903 3,11~12,24~25,74~76
    rna:2:1~1533 30~32,34,38,40~41
    rna:4:12~19 34~37
    13677 8vxx:A
    (3.1Å)
    		 36 N/A URS0000D77919 N/A synthetic
    construct
    32630    		 40437193 Assembly1
    rna:B:1~36 8,30~32
    13678 8vxx:B
    (3.1Å)
    		 36 N/A URS0000D77919 N/A synthetic
    construct
    32630    		 40437193 Assembly1
    rna:A:1~36 28,30~32
    rna:C:1~36 8~10,14~15,19~20,25~26
    13679 8vxx:C
    (3.1Å)
    		 36 N/A URS0000D77919 N/A synthetic
    construct
    32630    		 40437193 Assembly1
    rna:B:1~36 8~10,14~16,19~20,25~26
    13680 8vxz:A
    (3.0Å)
    		 36 N/A URS0000D77919 N/A synthetic
    construct
    32630    		 40437193 Assembly1
    rna:B:1~36 28,30~31
    13681 8vxz:B
    (3.0Å)
    		 36 N/A URS0000D77919 N/A synthetic
    construct
    32630    		 40437193 Assembly1
    rna:A:1~36 8,30~31
    rna:C:1~36 8,10,14~15,19~20,25~26
    13682 8vxz:C
    (3.0Å)
    		 36 N/A URS0000D77919 N/A synthetic
    construct
    32630    		 40437193 Assembly1
    rna:B:1~36 8,10,14~15,19~20,25~26
    13683 8vy0:A
    (3.1Å)
    		 36 N/A URS0000D77919 N/A synthetic
    construct
    32630    		 40437193 Assembly1
    rna:B:1~36 8,28,30~31
    13684 8vy0:B
    (3.1Å)
    		 36 N/A URS0000D77919 N/A synthetic
    construct
    32630    		 40437193 Assembly1
    rna:A:1~36 8,28,30~31
    rna:C:1~36 8,10,14~15,19~20,25~26
    13685 8vy0:C
    (3.1Å)
    		 36 N/A URS0000D77919 N/A synthetic
    construct
    32630    		 40437193 Assembly1
    rna:B:1~36 8,10,14~15,19~20,25~26
    13686 8vy1:A
    (3.1Å)
    		 36 N/A URS0000D77919 N/A synthetic
    construct
    32630    		 40437193 Assembly1
    rna:B:1~36 30~31
    13687 8vy1:B
    (3.1Å)
    		 36 N/A URS0000D77919 N/A synthetic
    construct
    32630    		 40437193 Assembly1
    rna:A:1~36 30~31
    rna:C:1~36 8,10,14~15,20,25~26
    13688 8vy1:C
    (3.1Å)
    		 36 N/A URS0000D77919 N/A synthetic
    construct
    32630    		 40437193 Assembly1
    rna:B:1~36 10,14~15,19~20,25~26
    13689 8w2n:1
    (3.2Å)
    		 2815 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02541 Escherichia
    coli
    562    		 N/A Assembly1
    rna:2:1~1532 1701~1703,1837,1848,1912~1913,
    1915~1916,1919~1920,1947~1949,
    1959~1961
    rna:3:1~120 861~864,915,917~918,958,2340
    rna:5:1~76 1908~1909,1922~1923,2063~2064,
    2251~2253,2255,2450~2451,2602
    13690 8w2n:2
    (3.2Å)
    		 1532 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00177 Escherichia
    coli
    562    		 N/A Assembly1
    rna:1:1~2903 702,784,1407~1409,1418,1429,14
    74,1483~1484,1492~1495,1517
    rna:4:13~18 693,926,1400,1498
    rna:5:1~76 790,966,1229~1230,1338~1340,14
    00
    13691 8w2n:3
    (3.2Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00001 Escherichia
    coli
    562    		 N/A Assembly1
    rna:1:1~2903 41,78~80,89,96~97,99~100
    13692 8w2n:5
    (3.2Å)
    		 77 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Escherichia
    coli
    562    		 N/A Assembly1
    rna:1:1~2903 3,12,24~25,74~76
    rna:2:1~1532 30~32,34,38,40~41
    rna:4:13~18 34~37
    13693 8w51:A
    (2.4Å)
    		 2904 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000B21DEA RF02541 Escherichia
    coli
    562    		 N/A Assembly1
    rna:B:2~119 861~864,915,917~919,958,2340
    13694 8w51:B
    (2.4Å)
    		 118 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000366A67 RF00001 Escherichia
    coli
    562    		 N/A Assembly1
    rna:A:1~2904 41,78~81,89~90,96~97,99~101
    13695 8wce:G
    (3.09Å)
    		 66 N/A URS000291574B N/A synthetic
    construct
    32630    		 38661236 Assembly1
    rna:T:1~31 -29~0
    13696 8wce:T
    (3.09Å)
    		 31 N/A URS0002915753 N/A synthetic
    construct
    32630    		 38661236 Assembly1
    rna:G:-29~36 2~31
    13697 8wf9:B
    (3.13Å)
    		 54 N/A URS000340221A N/A synthetic
    construct
    32630    		 40217120 Assembly1
    rna:C:1~18 -17~0
    13698 8wf9:C
    (3.13Å)
    		 18 N/A URS0003402211 N/A synthetic
    construct
    32630    		 40217120 Assembly1
    rna:B:-17~36 1~18
    13699 8wfa:B
    (3.13Å)
    		 57 N/A URS000340221A N/A synthetic
    construct
    32630    		 40217120 Assembly1
    rna:C:1~21 -20~0
    13700 8wfa:C
    (3.13Å)
    		 21 N/A URS0003402211 N/A synthetic
    construct
    32630    		 40217120 Assembly1
    rna:B:-20~36 1~21
    << < 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 > >>
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    Reference:
  • Chengxin Zhang, Lydia Freddolino (2024) "FURNA: a database for function annotations of RNA structures," PLOS Biology 22(7): e3002476.