SEQ2FUN

FURNA
Download all results in tab-seperated text for 14210 RNAs.
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    # PDB
    (Resolution)
    Length EC number
    & GO term
    RNAcentral Rfam Taxon PubMed ATtRACT
    motif
    Ligand &
    binding nucleotides
    13701 8z9e:M
    (3.13Å)

    39 N/A N/A N/A metagenome
    256318
    39143216 Assembly1
    rna:N:-16~37 1~4,6~10,12~16,18~22,24~28
    13702 8z9e:N
    (3.13Å)

    34 N/A N/A N/A metagenome
    256318
    39143216 Assembly1
    rna:M:-9~30 9~25,27~31,33~36
    13703 8z9h:F
    (2.7Å)

    13 N/A N/A N/A Thogoto
    virus
    (isolate
    SiAr
    126)

    126796
    38816392 Assembly1
    rna:G:2~10 8~17
    13704 8z9r:F
    (2.58Å)

    13 N/A N/A N/A Thogoto
    virus
    (isolate
    SiAr
    126)

    126796
    38816392 Assembly1
    rna:G:1~10 8~17
    13705 8z9r:G
    (2.58Å)

    10 N/A N/A N/A Thogoto
    virus
    (isolate
    SiAr
    126)

    126796
    38816392 Assembly1
    rna:F:5~17 1~10
    13706 9ash:R
    (2.58Å)

    37 N/A N/A N/A Lactococcus
    lactis
    subsp.
    lactis

    1360
    38989619 Assembly1
    rna:T:7~28 15~19,21~25,27~31,33,35~37
    13707 9ash:T
    (2.58Å)

    22 N/A N/A N/A Lactococcus
    lactis
    subsp.
    lactis

    1360
    38989619 Assembly1
    rna:R:1~37 7~9,11~16,19~22,24~28
    13708 9asi:R
    (2.79Å)

    37 N/A N/A N/A Lactococcus
    lactis
    subsp.
    lactis

    1360
    38989619 Assembly1
    rna:T:7~35 9~13,15~19,21~25,27~31,33~35,3
    7
    13709 9asi:T
    (2.79Å)

    29 N/A N/A N/A Lactococcus
    lactis
    subsp.
    lactis

    1360
    38989619 Assembly1
    rna:R:1~37 8~10,12~16,18~22,24~28,30~34
    13710 9ax7:A
    (2.63Å)

    1519 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF00177
    RF01959
    RF02542
    RF01960
    Escherichia
    coli

    562
    39222680 Assembly1
    rna:X:13~21 693,926,1400~1402,1493,1498
    rna:Z:2~76 790,966,1229~1230,1338~1340,14
    00

    rna:a:1~2903 702,784,899,1407~1409,1418,142
    9,1474~1475,1483~1484,1492~149
    6,1517
    13711 9ax7:Z
    (2.63Å)

    75 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Escherichia
    coli

    562
    39222680 Assembly1
    rna:A:2~1534 30~32,34,38,40~41
    rna:X:13~21 34~37
    rna:a:1~2903 11~12,24~25,74~76
    13712 9ax7:a
    (2.63Å)

    2753 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF02540
    RF02541
    RF02543
    RF00002
    Escherichia
    coli

    562
    39222680 Assembly1
    rna:A:2~1534 1689,1700~1703,1832,1836~1837,
    1846,1848,1895,1912~1913,1915~
    1916,1919~1920,1947~1948,1959~
    1961

    rna:Z:2~76 1907~1909,1922~1923,2063~2064,
    2251~2253,2450~2451,2602

    rna:b:1~119 861~863,915,917~918,958,2340
    13713 9ax7:b
    (2.63Å)

    119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF00001 Escherichia
    coli

    562
    39222680 Assembly1
    rna:a:1~2903 41,78~80,89,97,99~100
    13714 9ax8:A
    (2.6Å)

    2854 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF02540
    RF02541
    RF02543
    RF00002
    Escherichia
    coli

    562
    39222680 Assembly1
    rna:X:2~119 861~863,915,917~918,958
    rna:a:2~1540 1700,1703,1832,1837,1846,1848,
    1912~1914,1916,1919~1920,1947~
    1949,1959~1961
    13715 9ax8:X
    (2.6Å)

    118 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF00001 Escherichia
    coli

    562
    39222680 Assembly1
    rna:A:1~2903 78~80,89~90,97,99~100
    13716 9ax8:a
    (2.6Å)

    1539 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF01959
    RF00177
    RF02542
    RF01960
    Escherichia
    coli

    562
    39222680 Assembly1
    rna:x:13~21 693,926,1397,1400~1401,1492~14
    93,1498

    rna:y:0~76 790,966,1229,1338~1340,1400
    rna:A:1~2903 702,784,899,1407~1409,1418~141
    9,1429,1474~1475,1483~1484,149
    3~1496,1517
    13717 9ax8:y
    (2.6Å)

    77 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Escherichia
    coli

    562
    39222680 Assembly1
    rna:a:2~1540 30~31,34,38,40~42
    rna:x:13~21 34~35
    13718 9axt:AA
    (2.4Å)

    1705 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF01960
    RF02542
    RF01959
    RF00177
    Schizosaccharomyces
    pombe

    4896
    39379376 Assembly1
    rna:B2:3~3498 631~632,925,928,987~988,1009~1
    010,1696~1698,1708,1788
    13719 9axt:B2
    (2.4Å)

    3212 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF02540
    RF02541
    RF02543
    Schizosaccharomyces
    pombe

    4896
    39379376 Assembly1
    rna:AA:1~1842 878~880,1990,2213,2283~2284,22
    95~2296,2327,2379~2381

    rna:B3:1~119 1028~1030,1084~1088,1187,1202,
    1228,1234~1235

    rna:B4:9~165 3~23,59,149~150,338~345,347~35
    0,353~354,357,359,376~377,412~
    427,681~682,718,1428~1429,1432
    ~1433,1453~1454,1475~1476,1564
    ,1592,1607,1620,1653~1654,1885
    ~1887,2474,3089~3091
    13720 9axt:B3
    (2.4Å)

    119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF00001 Schizosaccharomyces
    pombe

    4896
    39379376 Assembly1
    rna:B2:3~3498 77~80,84,88,98,100~102
    13721 9axt:B4
    (2.4Å)

    157 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF00002 Schizosaccharomyces
    pombe

    4896
    39379376 Assembly1
    rna:B2:3~3498 9~30,32~41,43~45,48,61~62,112,
    114,117,121~123,134~136,144~15
    8,160~163,165
    13722 9axu:2
    (1.94Å)

    3212 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF02540
    RF02541
    RF02543
    Schizosaccharomyces
    pombe

    4896
    39379376 Assembly1
    rna:3:1~119 1028~1030,1084,1086~1088,1187,
    1202,1228,1233~1234

    rna:4:9~165 3~23,59,149,338~345,347~350,35
    3~354,357,359,376~377,412~427,
    681~682,718,1428~1429,1432~143
    3,1452~1454,1475~1476,1564,160
    7,1620,1653~1654,1885~1887,247
    4,3089~3091
    13723 9axu:3
    (1.94Å)

    119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF00001 Schizosaccharomyces
    pombe

    4896
    39379376 Assembly1
    rna:2:3~3498 77~80,84,88,98,100~102
    13724 9axu:4
    (1.94Å)

    157 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF00002 Schizosaccharomyces
    pombe

    4896
    39379376 Assembly1
    rna:2:3~3498 9~21,23~30,32~41,43~45,48,61,1
    12,114,117~118,121~123,133~136
    ,144~158,160~165
    13725 9axv:AA
    (2.4Å)

    1705 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF01960
    RF02542
    RF01959
    RF00177
    Schizosaccharomyces
    pombe

    4896
    39379376 Assembly1
    rna:B2:3~3498 631,928,986~988,1685~1687,1697
    ~1698,1799~1800,1822

    rna:Sm:1~77 1016,1208,1617~1618,1678
    rna:Sn:1~76 1196~1197,1798
    rna:S3:27~36 580,919,1166,1291,1678~1679,17
    97~1798,1803
    13726 9axv:B2
    (2.4Å)

    3212 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF02540
    RF02541
    RF02543
    Schizosaccharomyces
    pombe

    4896
    39379376 Assembly1
    rna:AA:1~1842 878,880,2213,2295,2343~2344,23
    50~2352,2380

    rna:B3:1~119 1028~1030,1084~1088,1187,1202,
    1228,1234

    rna:B4:9~165 3~23,59,149~150,338~345,347~35
    0,353~354,357,359,376~377,412~
    427,681~682,718,1428~1429,1432
    ~1433,1453~1454,1475~1476,1564
    ,1592,1606~1607,1619~1620,1653
    ~1654,1885~1887,2474,3089~3091

    rna:Sn:1~76 2714~2715,2915,3066
    13727 9axv:B3
    (2.4Å)

    119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF00001 Schizosaccharomyces
    pombe

    4896
    39379376 Assembly1
    rna:B2:3~3498 77~80,84,88,98,100~102
    13728 9axv:B4
    (2.4Å)

    157 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF00002 Schizosaccharomyces
    pombe

    4896
    39379376 Assembly1
    rna:B2:3~3498 9~30,32~41,43~45,48~49,61,112,
    114,117,120~123,133~137,144~15
    8,160~163,165
    13729 9axv:S3
    (2.4Å)

    10 N/A N/A N/A Schizosaccharomyces
    pombe

    4896
    39379376 Assembly1
    rna:AA:1~1842 27,29~36
    rna:Sm:1~77 30~32
    rna:Sn:1~76 33~36
    13730 9axv:Sm
    (2.4Å)

    77 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Schizosaccharomyces
    pombe

    4896
    39379376 Assembly1
    rna:AA:1~1842 31~33,35,39
    rna:S3:27~36 36~38
    13731 9axv:Sn
    (2.4Å)

    75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS00021ED942 RF00005 Schizosaccharomyces
    pombe

    4896
    39379376 Assembly1
    rna:AA:1~1842 35~36,41~42
    rna:B2:3~3498 74~76
    rna:S3:27~36 34,37
    13732 9b00:1A
    (2.8Å)

    2871 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF02541 Thermus
    thermophilus
    HB8

    300852
    39019034 Assembly1
    rna:1B:1~120 861~863,915,917~919,958
    rna:1a:4~1533 1689,1701~1704,1832,1836~1837,
    1846,1848,1895,1912~1913,1915~
    1916,1919~1920,1947~1948,1959~
    1961,2863~2864

    rna:1w:1~76 882,896~897,1913,2482~2483,250
    6~2507,2553,2555,2573,2583~258
    5,2602

    rna:1x:2~76 1907~1909,1922~1924,2064,2251~
    2253,2255,2450~2451,2602

    rna:1y:1~76 1851,2112,2169,2394~2395,2421~
    2422
    13733 9b00:1B
    (2.8Å)

    120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF00001 Thermus
    thermophilus
    HB8

    300852
    39019034 Assembly1
    rna:1A:6~2897 78~81,90,97~98,100~101
    13734 9b00:1a
    (2.8Å)

    1500 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF00177
    RF01959
    RF02542
    RF01960
    Thermus
    thermophilus
    HB8

    300852
    39019034 Assembly1
    rna:1A:6~2897 702,783~784,899~900,1407~1409,
    1418,1429,1442A,1473~1475,1483
    ~1484,1494~1496,1517

    rna:1v:12~24 530,926,1196,1397,1400~1401,14
    92~1493,1498,1503,1505,1507

    rna:1w:1~76 530~531,1054,1493
    rna:1x:2~76 790,966,1229~1230,1338~1341,14
    00
    13735 9b00:1v
    (2.8Å)

    13 N/A N/A N/A Tequatrovirus
    T4

    10665
    39019034 Assembly1
    rna:1a:4~1533 12~13,15~21,23~24
    rna:1w:1~76 19~21
    rna:1x:2~76 16~18
    13736 9b00:1w
    (2.8Å)

    74 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Escherichia
    coli

    562
    39019034 Assembly1
    rna:1A:6~2897 19,37~38,56,64,74~76
    rna:1a:4~1533 34~37
    rna:1v:12~24 34~37
    13737 9b00:1x
    (2.8Å)

    76 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Escherichia
    coli

    562
    39019034 Assembly1
    rna:1A:6~2897 2~3,11~13,24~25,74~76
    rna:1a:4~1533 30~32,34,38~41
    rna:1v:12~24 34~37
    13738 9b00:1y
    (2.8Å)

    74 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Escherichia
    coli

    562
    39019034 Assembly1
    rna:1A:6~2897 19,56,71,76
    13739 9b00:2A
    (2.8Å)

    2800 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF02541 Thermus
    thermophilus
    HB8

    300852
    39019034 Assembly2
    rna:2B:1~120 861~864,915~918,958
    rna:2a:4~1532 1700,1702~1704,1832,1836~1837,
    1846,1848,1912~1916,1919~1920,
    1947~1948,1959~1961,2863~2864

    rna:2w:2~76 881~882,896~897,1913,2483,2506
    ~2507,2553,2555,2583~2585,2602

    rna:2x:2~76 1907~1909,1922~1924,2251~2253,
    2255,2439,2451,2602

    rna:2y:1~76 1851~1852,2112,2169,2394~2395,
    2421~2422
    13740 9b00:2B
    (2.8Å)

    120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF00001 Thermus
    thermophilus
    HB8

    300852
    39019034 Assembly2
    rna:2A:6~2897 78~80,90,97~98,100~102
    13741 9b00:2a
    (2.8Å)

    1503 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF00177
    RF01959
    RF02542
    RF01960
    Thermus
    thermophilus
    HB8

    300852
    39019034 Assembly2
    rna:2A:6~2897 702,783~784,899~900,1407~1409,
    1418,1429,1442A,1473~1474,1483
    ~1485,1493~1496,1517

    rna:2v:12~24 926,1196,1397,1400~1402,1493,1
    498,1503,1505~1507

    rna:2w:2~76 530,1054,1493
    rna:2x:2~76 790,966,1229~1230,1338~1340,14
    00
    13742 9b00:2v
    (2.8Å)

    13 N/A N/A N/A Tequatrovirus
    T4

    10665
    39019034 Assembly2
    rna:2a:4~1532 13,15~20,22~24
    rna:2w:2~76 19~21
    rna:2x:2~76 16~18
    13743 9b00:2w
    (2.8Å)

    72 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS00005AA258 RF00005 Escherichia
    coli

    562
    39019034 Assembly2
    rna:2A:6~2897 19,37~38,56,64,74~76
    rna:2a:4~1532 34~37
    rna:2v:12~24 34~37
    13744 9b00:2x
    (2.8Å)

    76 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Escherichia
    coli

    562
    39019034 Assembly2
    rna:2A:6~2897 11~13,24~25,74~76
    rna:2a:4~1532 30~32,34,38~41
    rna:2v:12~24 34~37
    13745 9b00:2y
    (2.8Å)

    73 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Escherichia
    coli

    562
    39019034 Assembly2
    rna:2A:6~2897 19,56,71~72,76
    13746 9bdl:A18S
    (2.8Å)

    1691 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS0000EEACFB RF01960
    RF02542
    RF01959
    RF00177
    Oryctolagus
    cuniculus

    9986
    38718836 Assembly1
    rna:A28S:1~5069 677~678,970,1028~1029,1180,170
    8~1710,1719~1721,1731,1815~181
    6,1824~1828,1849

    rna:MRNA:2~11 626,961,1207,1489,1701~1703,18
    30

    rna:PTRN:1~76 1058,1248,1524,1639~1641,1701
    13747 9bdl:A28S
    (2.8Å)

    3557 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF02543 Oryctolagus
    cuniculus

    9986
    38718836 Assembly1
    rna:A18S:1~1869 1563~1564,2884~2885,3629,3695,
    3712,3759~3760,3762~3763,3766~
    3767,3794~3796,3806~3808,3834

    rna:A58S:1~156 1~22,58,339,342~348,350~353,35
    6~357,360,362,379~380,415~430,
    1304~1305,1333~1334,1371,2308~
    2309,2312,2333,2355,2444,2472,
    2486~2487,2508~2509,2543~2544,
    2778~2779,3890

    rna:A5S:1~120 1736~1738,1741,1792~1796,1894,
    1909,1936,1942

    rna:ETRN:1~76 3714~3716,3738~3740,3958,4341~
    4342,4370~4371

    rna:PTRN:1~76 3755~3756,3769~3771,4196~4198,
    4396~4397
    13748 9bdl:A58S
    (2.8Å)

    151 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF00002
    RF02540
    Oryctolagus
    cuniculus

    9986
    38718836 Assembly1
    rna:A28S:1~5069 3~22,24~37,40~41,53~54,103,108
    ,112~113,126~127,136,138~156
    13749 9bdl:A5S
    (2.8Å)

    120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF00001 Oryctolagus
    cuniculus

    9986
    38718836 Assembly1
    rna:A28S:1~5069 77~80,84,88,98,100~101,103
    13750 9bdl:ETRN
    (2.8Å)

    77 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Escherichia
    coli
    K-12

    83333
    38718836 Assembly1
    rna:A28S:1~5069 3~4,19,70~72,75~76
    rna:PTRN:1~76 35~36
    13751 9bdl:MRNA
    (2.8Å)

    10 N/A URS00023359A7 N/A Oryctolagus
    cuniculus

    9986
    38718836 Assembly1
    rna:A18S:1~1869 2,5~7,9~11
    rna:PTRN:1~76 5~7
    13752 9bdl:PTRN
    (2.8Å)

    77 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Escherichia
    coli
    K-12

    83333
    38718836 Assembly1
    rna:A18S:1~1869 30~32,34,38,40~41
    rna:A28S:1~5069 11~13,24~25,74~76
    rna:MRNA:2~11 34~37
    13753 9bdn:A18S
    (3.1Å)

    1691 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS0000EEACFB RF01960
    RF02542
    RF01959
    RF00177
    Oryctolagus
    cuniculus

    9986
    38718836 Assembly1
    rna:A28S:1~5069 677~678,970,1029,1052,1180,170
    8~1710,1719~1720,1731,1815~181
    6,1824~1828,1849

    rna:MRNA:2~11 626,961,1207,1331,1489,1698,17
    01~1703,1830

    rna:PTRN:1~76 1058,1248,1524,1639~1641,1701
    rna:TIRN:1~76 50,488
    13754 9bdn:A28S
    (3.1Å)

    3557 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF02543 Oryctolagus
    cuniculus

    9986
    38718836 Assembly1
    rna:A18S:1~1869 1563~1564,2884,3695,3700,3712,
    3759~3763,3766~3767,3794~3796,
    3806~3807

    rna:A58S:1~156 1~22,58,339,341~348,350~353,35
    6~357,360,362,379~380,415~430,
    1305,1333~1334,1371,2308~2309,
    2312~2313,2333~2334,2355,2444,
    2472,2508,2543~2545,2778~2779

    rna:A5S:1~120 1736~1738,1741,1792~1795,1894,
    1909,1936,1942

    rna:ETRN:1~76 3714~3716,3738~3740,3958,4046,
    4341~4342,4370~4371

    rna:PTRN:1~76 3754,3756,3769~3771,4196~4198,
    4396~4397

    rna:TIRN:1~76 1981,2009
    13755 9bdn:A58S
    (3.1Å)

    151 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF00002
    RF02540
    Oryctolagus
    cuniculus

    9986
    38718836 Assembly1
    rna:A28S:1~5069 3~22,24~37,40~41,53~54,103,108
    ,112~113,115,126~127,135~136,1
    38~149,151~156
    13756 9bdn:A5S
    (3.1Å)

    120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF00001 Oryctolagus
    cuniculus

    9986
    38718836 Assembly1
    rna:A28S:1~5069 77~79,84,88,98,100~101,103
    13757 9bdn:ETRN
    (3.1Å)

    77 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Escherichia
    coli

    562
    38718836 Assembly1
    rna:A28S:1~5069 3~4,19,56,70~72,75~76
    13758 9bdn:MRNA
    (3.1Å)

    10 N/A URS00023359A7 N/A Homo
    sapiens

    9606
    38718836 Assembly1
    rna:A18S:1~1869 2,5~7,9~11
    rna:PTRN:1~76 5~7
    13759 9bdn:PTRN
    (3.1Å)

    77 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Escherichia
    coli

    562
    38718836 Assembly1
    rna:A18S:1~1869 30~32,34,38,40~41
    rna:A28S:1~5069 11~13,24~25,74~76
    rna:MRNA:2~11 34~37
    13760 9bdn:TIRN
    (3.1Å)

    71 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Saccharomyces
    cerevisiae

    4932
    38718836 Assembly1
    rna:A28S:1~5069 19,56
    13761 9bdp:A18S
    (3.7Å)

    1691 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS0000EEACFB RF01960
    RF02542
    RF01959
    RF00177
    Oryctolagus
    cuniculus

    9986
    38718836 Assembly1
    rna:A28S:1~5069 677~678,970,1028~1029,1180,170
    8~1710,1719~1721,1731,1815~181
    6,1824~1828,1849

    rna:MRNA:2~11 626,961,1207,1331,1489,1698,17
    01~1703,1825,1830

    rna:PTRN:1~76 1058,1248,1524~1525,1639~1641,
    1701
    13762 9bdp:A28S
    (3.7Å)

    3557 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF02543 Oryctolagus
    cuniculus

    9986
    38718836 Assembly1
    rna:A18S:1~1869 1563~1564,2884~2885,3629,3712,
    3759~3760,3762~3763,3766~3767,
    3794~3796,3806~3807

    rna:A58S:1~156 1~22,58,146~147,339,342~348,35
    0~353,356~357,360,362,379~380,
    415~430,1305,1333~1334,1371,23
    08~2309,2333,2355,2444~2445,24
    86~2487,2493,2508,2510,2542~25
    45,2778~2779,3890

    rna:A5S:1~120 1736~1738,1741,1792~1795,1909,
    1936

    rna:ETRN:1~76 3714~3715,3738~3740,3958,4046,
    4341~4342,4370~4371

    rna:PTRN:1~76 3769~3771,4196~4198,4397,4548
    rna:TIRN:1~76 1981,2009
    13763 9bdp:A58S
    (3.7Å)

    151 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF00002
    RF02540
    Oryctolagus
    cuniculus

    9986
    38718836 Assembly1
    rna:A28S:1~5069 3~22,24~37,40~41,53~54,103,108
    ,110,112~113,124,126~128,136,1
    38~149,151~156
    13764 9bdp:A5S
    (3.7Å)

    120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF00001 Oryctolagus
    cuniculus

    9986
    38718836 Assembly1
    rna:A28S:1~5069 77~79,84,98,100~101,103
    13765 9bdp:ETRN
    (3.7Å)

    77 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Escherichia
    coli

    562
    38718836 Assembly1
    rna:A28S:1~5069 3~4,19,56,70~72,76
    13766 9bdp:MRNA
    (3.7Å)

    10 N/A URS00023359A7 N/A Homo
    sapiens

    9606
    38718836 Assembly1
    rna:A18S:1~1869 2,4~7,9~11
    rna:PTRN:1~76 5~7
    13767 9bdp:PTRN
    (3.7Å)

    77 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Escherichia
    coli

    562
    38718836 Assembly1
    rna:A18S:1~1869 30~31,34,38~41
    rna:A28S:1~5069 12~13,24~25,74~76
    rna:MRNA:2~11 34~37
    13768 9bdp:TIRN
    (3.7Å)

    70 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Saccharomyces
    cerevisiae

    4932
    38718836 Assembly1
    rna:A28S:1~5069 19,56
    13769 9bh5:A5
    (2.63Å)

    3022 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF02543 Caenorhabditis
    elegans

    6239
    39209556
    392

    145
    Assembly1
    rna:A7:1~119 1050~1053,1108~1109,1208,1223,
    1249,1255

    rna:A8:2~153 1~22,58,144,183,186,335~343,34
    5~348,351~352,355,357,374~375,
    404,410~425,685~686,721,1458~1
    459,1484,1506,1595~1596,1660~1
    661,1693~1696,2489,2697,3107

    rna:B2:2~1754 901~902,2028~2029,2228~2229,22
    94,2298,2309~2310,2358~2362,23
    65~2366,2393~2395,2405~2407

    rna:DA:1~76 2354,2369~2370,2731~2733,2735,
    2920,2931~2932,3083

    rna:DB:1~76 2359,2388,2963~2964,2987~2988,
    3034~3036,3064~3066
    13770 9bh5:A7
    (2.63Å)

    119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF00001 Caenorhabditis
    elegans

    6239
    39209556 Assembly1
    rna:A5:1~3510 77~79,84,88,98,100~102
    13771 9bh5:A8
    (2.63Å)

    146 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF00002 Caenorhabditis
    elegans

    6239
    39209556 Assembly1
    rna:A5:1~3510 2~22,24~33,35~37,40,53~54,68,1
    02,107,111,121~122,124~125,132
    ~133,135~136,138~153
    13772 9bh5:B2
    (2.63Å)

    1476 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF01960
    RF02542
    RF01959
    RF00177
    Caenorhabditis
    elegans

    6239
    39209556
    26

    145

    111

    448

    M017_0.6
    Assembly1
    rna:A5:1~3510 604~605,878,936~937,959,1082,1
    600~1602,1611~1613,1623~1624,1
    700~1701,1711~1713,1734

    rna:DA:1~76 966,1150,1418,1531~1533,1593
    rna:DB:1~76 553~554,1233,1710
    rna:DC:1~10 869,1109,1593~1594,1710,1715
    13773 9bh5:DA
    (2.63Å)

    76 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Caenorhabditis
    elegans

    6239
    39209556 Assembly1
    rna:B2:2~1754 30~32,34,38,40~41
    rna:A5:1~3510 2~3,12~13,24,74~76
    rna:DC:1~10 34~37
    13774 9bh5:DB
    (2.63Å)

    76 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Caenorhabditis
    elegans

    6239
    39209556 Assembly1
    rna:B2:2~1754 34~37
    rna:A5:1~3510 37~38,63,71,74~76
    rna:DC:1~10 34~37
    13775 9bh5:DC
    (2.63Å)

    10 N/A N/A N/A Caenorhabditis
    elegans

    6239
    39209556 Assembly1
    rna:B2:2~1754 1,3~7
    rna:DA:1~76 4~6
    rna:DB:1~76 7~9
    13776 9bih:G
    (3.24Å)

    28 N/A N/A N/A Severe
    acute
    respiratory
    syndrome
    coronavirus
    2

    2697049
    39755678 Assembly1
    rna:H:8~34 1~13,16~28
    13777 9bih:H
    (3.24Å)

    27 N/A N/A N/A Severe
    acute
    respiratory
    syndrome
    coronavirus
    2

    2697049
    39755678 Assembly1
    rna:G:1~28 8~20,22~34
    13778 9bs0:A
    (3.3Å)

    2678 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF02540
    RF02541
    RF02543
    RF00002
    Bacillus
    subtilis
    subsp.
    subtilis
    str.
    168

    224308
    39658043 Assembly1
    rna:B:3~114 908~910,965
    13779 9bs0:B
    (3.3Å)

    111 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF00001 Bacillus
    subtilis
    subsp.
    subtilis
    str.
    168

    224308
    39658043 Assembly1
    rna:A:3~2925 76~78,94,97~98
    13780 9bss:A
    (3.1Å)

    2572 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF02540
    RF02541
    RF02543
    RF00002
    Bacillus
    subtilis
    subsp.
    subtilis
    str.
    168

    224308
    39658043 Assembly1
    rna:B:3~114 908~911,961~965,1004,1073~1074
    13781 9bss:B
    (3.1Å)

    112 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF00001 Bacillus
    subtilis
    subsp.
    subtilis
    str.
    168

    224308
    39658043 Assembly1
    rna:A:3~2925 76~78,85,87,95,97~99
    13782 9bz1:A
    (2.8Å)

    84 GO:0006730 (P) one-carbon metabolic pr...
    GO:1900371 (P) regulation of purine nu...
    N/A RF01750 Clostridium
    beijerinckii

    1520
    N/A Assembly1
    rna:B:1~89 8~11,39~41
    13783 9bz1:B
    (2.8Å)

    84 GO:0006730 (P) one-carbon metabolic pr...
    GO:1900371 (P) regulation of purine nu...
    N/A RF01750 Clostridium
    beijerinckii

    1520
    N/A Assembly1
    rna:A:1~89 23~25,30~32
    13784 9c3h:L1
    (2.0Å)

    148 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS0000005270 RF00002 Homo
    sapiens

    9606
    39571015
    1227

    592

    993

    1215

    1271

    s37

    1238

    1178

    M085_0.6

    1389

    1360

    1352

    589

    706
    Assembly1
    rna:L5:1~5069 3~22,24~37,40,53~54,68,103,108
    ,110~113,128,136,138~149,151~1
    56
    13785 9c3h:L5
    (2.0Å)

    3531 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF02543
    RF02540
    RF02541
    Homo
    sapiens

    9606
    39571015
    M054_0.6

    1306

    769

    706

    1303

    762

    872

    1148

    1149

    764

    870

    167

    21

    930

    1029

    1075

    1072

    1073

    s77

    1071

    819

    1373

    938

    546

    s52

    s50

    931

    813

    936

    s59

    995

    994

    1083

    1314

    991

    1312

    1311

    1028

    1150

    123

    124

    125

    1068

    1017

    1060

    s100

    s102

    52

    533

    M227_0.6

    1384

    821

    926

    822

    1128

    988

    1321

    595

    705

    1328

    707

    1124

    987

    703

    M290_0.6

    83

    1181

    797

    796

    795

    836

    837

    791

    790

    838

    1331

    1334

    s70

    1016

    s72

    1393

    1272

    1012

    1013

    1236

    1237

    763

    1231

    1232

    1233

    1335

    1238

    M109_0.6

    1336

    s17

    1239

    1333

    589

    776

    s96

    s99

    M273_0.6

    1389

    902

    900

    901

    906

    905

    33

    375

    970

    924

    M044_0.6

    1245

    s62

    s61

    1227

    1164

    M035_0.6

    1223

    604

    M320_0.6

    1347

    60

    s81

    M349_0.6

    708

    175

    1026

    977

    976

    974

    852

    853

    M154_0.6

    884

    s55

    979

    M153_0.6

    183

    185

    1375

    815

    1036

    1037

    1034

    1035

    1212

    M102_0.6

    1216

    M083_0.6

    986

    467

    M148_0.6

    1354

    M103_0.6

    169

    91

    1127

    M070_0.6

    M272_0.6

    M020_0.6

    M050_0.6

    1187

    1182

    1183

    503

    727

    M347_0.6

    722

    935

    M086_0.6

    883

    1165

    1166

    606

    886

    156

    748

    749

    608

    M061_0.6

    s48

    1055

    878

    879

    1059

    953

    952

    42

    954

    957

    1107

    1352

    774

    1215

    M104_0.6

    1173

    770

    773

    958

    1271

    610

    1273

    779

    778

    1178

    M151_0.6

    78

    1285

    1042

    1041

    1040

    1043

    1045

    1044

    1288

    354

    1360

    684

    800
    Assembly1
    rna:L1:1~156 1~22,58,146,193,339,341~348,35
    0~353,355~357,360,362,379~380,
    415~430,1304~1305,1333~1334,13
    71,2308~2309,2312~2313,2332~23
    34,2355,2444~2445,2508~2509,25
    43,2778~2780,3890

    rna:L9:1~120 1736~1739,1741,1792~1796,1894,
    1909,1936,1942

    rna:S4:1~76 3754~3756,3769~3771,4196~4198,
    4200,4396~4397,4547~4548

    rna:S2:1~1869 1563~1565,2867,2884~2885,3629,
    3695,3700,3711,3759~3764,3766~
    3767,3794~3796,3806~3808
    13786 9c3h:L9
    (2.0Å)

    120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF00001 Homo
    sapiens

    9606
    39571015
    931

    1290

    s51

    879
    Assembly1
    rna:L5:1~5069 77~80,84,88,98,100~104
    13787 9c3h:S2
    (2.0Å)

    1660 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF01960
    RF02542
    RF01959
    RF00177
    Homo
    sapiens

    9606
    39571015
    1263

    872

    1149

    1267

    764

    43

    692

    1079

    1072

    1073

    819

    346

    546

    1378

    930

    936

    935

    M296_0.6

    M141_0.6

    1068

    1017

    M147_0.6

    1060

    s102

    1386

    M016_0.6

    s48

    926

    822

    1128

    1323

    988

    595

    1327

    986

    796

    836

    762

    790

    838

    1124

    s72

    1392

    1390

    1236

    1335

    1334

    M109_0.6

    1238

    M273_0.6

    s14

    s96

    s99

    1311

    902

    900

    821

    1333

    924

    s62

    s61

    M074_0.6

    335

    1167

    977

    976

    974

    970

    1037

    1035

    1213

    756

    639

    M148_0.6

    786

    1355

    M065_0.6

    167

    M070_0.6

    813

    M050_0.6

    1188

    1187

    1029

    815

    727

    722

    883

    604

    606

    884

    749

    779

    608

    M037_0.6

    1055

    878

    1059

    952

    1195

    954

    870

    1380

    325

    770

    610

    1274

    1042

    M127_0.6

    804
    Assembly1
    rna:L5:1~5069 368,677~678,970,1028~1030,1052
    ,1180,1708~1710,1719~1721,1731
    ,1815~1816,1824~1828,1849

    rna:S4:1~76 1058,1248,1524~1525,1639~1641,
    1701

    rna:S5:34~42 961,1056~1057,1207,1701~1702,1
    825,1830,1837~1838
    13788 9c3h:S4
    (2.0Å)

    76 N/A N/A N/A Homo
    sapiens

    9606
    39571015 Assembly1
    rna:L5:1~5069 2~3,12~13,24~25,74~76
    rna:S2:1~1869 30~32,34,38,40~41
    rna:S5:34~42 34~37
    13789 9c4g:a
    (2.53Å)

    2903 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS000268139D RF02541 Cutibacterium
    acnes

    1747
    39122144 Assembly1
    rna:b:1~120 946~948,999~1003,1041,1111
    13790 9c4g:b
    (2.53Å)

    120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS0000F006E4 RF00001 Cutibacterium
    acnes

    1747
    39122144 Assembly1
    rna:a:2~3080 78~81,88,90,97~98,100~101
    13791 9c8k:1
    (3.1Å)

    1708 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF01960
    RF02542
    RF01959
    RF00177
    Oryctolagus
    cuniculus

    9986
    39893634 Assembly1
    rna:2:1~53 1112~1113,1115~1121
    13792 9c8k:2
    (3.1Å)

    27 N/A N/A N/A Rabbit
    hemorrhagic
    disease
    virus

    11976
    39893634 Assembly1
    rna:1:1~1869 5~12,49
    13793 9cai:A5
    (2.59Å)

    3022 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF02540
    RF02541
    RF02543
    Caenorhabditis
    elegans

    6239
    39209556
    392

    145
    Assembly1
    rna:DA:1~76 2354,2368~2369,2731~2732,2735,
    2931~2932,3082~3083

    rna:A7:1~119 1050~1053,1108~1109,1208,1223,
    1249,1255

    rna:A8:2~153 1~22,58,144,183,186,335~343,34
    5~348,351~352,355,357,374~375,
    404,410~425,657,685~686,721,14
    58~1459,1484,1506,1595~1596,16
    60~1661,1693~1696,2489,2697,31
    07

    rna:B2:2~1754 901~902,2028~2029,2228~2229,22
    94,2298,2308~2310,2358~2362,23
    65~2366,2393~2395,2405~2406
    13794 9cai:A7
    (2.59Å)

    119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF00001 Caenorhabditis
    elegans

    6239
    39209556 Assembly1
    rna:A5:1~3510 77~79,84,88,98,100~102
    13795 9cai:A8
    (2.59Å)

    146 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF00002 Caenorhabditis
    elegans

    6239
    39209556 Assembly1
    rna:A5:1~3510 2~22,24~33,35~37,40,53~54,68,1
    02,107,110~111,121~122,124~125
    ,132~133,135~153
    13796 9cai:B2
    (2.59Å)

    1476 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF01960
    RF02542
    RF01959
    RF00177
    Caenorhabditis
    elegans

    6239
    39209556
    26

    145

    111

    448

    M017_0.6
    Assembly1
    rna:DA:1~76 966,1150,1418~1419,1531~1533,1
    593

    rna:A5:1~3510 604~605,878,936~937,959~960,10
    82,1600~1602,1611~1613,1623~16
    24,1700~1701,1711~1713,1734

    rna:DC:1~10 869,1109,1593~1594,1710,1715
    13797 9cai:DA
    (2.59Å)

    76 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Caenorhabditis
    elegans

    6239
    39209556 Assembly1
    rna:B2:2~1754 30~32,34,38~41
    rna:A5:1~3510 2~3,12,24~25,74~76
    rna:DC:1~10 34~37
    13798 9cai:DC
    (2.59Å)

    10 N/A N/A N/A Caenorhabditis
    elegans

    6239
    39209556 Assembly1
    rna:DA:1~76 4~6
    rna:B2:2~1754 1,3~7
    13799 9cg5:A
    (2.59Å)

    1519 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF00177
    RF01959
    RF02542
    RF01960
    Escherichia
    coli

    562
    39222680 Assembly1
    rna:X:13~21 693,926,1400~1403,1493,1498
    rna:Z:2~76 790,966,1229~1230,1338~1340,14
    00

    rna:a:1~2903 702,784,899,1407~1409,1418,142
    9,1473~1475,1483~1484,1492~149
    6,1517
    13800 9cg5:Z
    (2.59Å)

    75 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Escherichia
    coli

    562
    39222680 Assembly1
    rna:A:2~1534 30~32,34,38~41
    rna:X:13~21 34~37
    rna:a:1~2903 11~13,24~25,74~76
    << < 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 > >>
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    Reference:
  • Chengxin Zhang, Lydia Freddolino (2024) "FURNA: a database for function annotations of RNA structures," PLOS Biology 22(7): e3002476.