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FURNA
Download all results in tab-seperated text for 14210 RNAs.
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    # PDB
    (Resolution)
    Length EC number
    & GO term
    RNAcentral Rfam Taxon PubMed ATtRACT
    motif
    Ligand &
    binding nucleotides
    13901 9dfd:2B
    (2.6Å)

    120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF00001 Thermus
    thermophilus
    HB8

    300852
    39372947 Assembly2
    rna:2A:6~2897 78~81,90,97~98,100~102
    13902 9dfd:2a
    (2.6Å)

    1503 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF00177
    RF01959
    RF02542
    RF01960
    Thermus
    thermophilus
    HB8

    300852
    39372947 Assembly2
    rna:2A:6~2897 702,783~784,899,1407~1409,1418
    ,1429~1430,1442A,1473~1475,148
    3~1484,1494~1496,1517

    rna:2v:12~24 926,1196,1397,1400~1402,1492~1
    493,1498,1503,1505,1507

    rna:2w:2~76 530~531,1054,1493
    rna:2x:1~76 790,966,1229~1230,1338~1340,14
    00

    rna:2y:1~76 693~694
    13903 9dfd:2v
    (2.6Å)

    13 N/A N/A N/A Tequatrovirus
    T4

    10665
    39372947 Assembly2
    rna:2a:4~1532 13,15~20,22~24
    rna:2w:2~76 19~21
    rna:2x:1~76 16~18
    13904 9dfd:2w
    (2.6Å)

    72 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Escherichia
    coli

    562
    39372947 Assembly2
    rna:2A:6~2897 37~38,56,64,74~76
    rna:2a:4~1532 34~37
    rna:2v:12~24 34~37
    13905 9dfd:2x
    (2.6Å)

    77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS000041AF00 RF00005 Escherichia
    coli

    562
    39372947 Assembly2
    rna:2A:6~2897 11~13,24~25,74~76
    rna:2a:4~1532 30~32,34,38~41
    rna:2v:12~24 34~37
    13906 9dfd:2y
    (2.6Å)

    73 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Escherichia
    coli

    562
    39372947 Assembly2
    rna:2A:6~2897 3,19,56,71~72,76
    rna:2a:4~1532 37~38
    rna:2x:1~76 35~36
    13907 9dfe:1A
    (2.6Å)

    2872 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF02540
    RF02541
    RF02543
    RF00002
    Thermus
    thermophilus
    HB8

    300852
    39372947 Assembly1
    rna:1B:1~120 861~864,915,917~919,958
    rna:1a:4~1533 1689,1700~1704,1832,1836~1837,
    1846,1848,1895,1912~1916,1919~
    1920,1947~1949,1959~1961,2863~
    2864
    13908 9dfe:1B
    (2.6Å)

    120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF00001 Thermus
    thermophilus
    HB8

    300852
    39372947 Assembly1
    rna:1A:6~2897 78~81,90,97~98,100~102
    13909 9dfe:1a
    (2.6Å)

    1500 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF00177
    RF01959
    RF02542
    RF01960
    Thermus
    thermophilus
    HB8

    300852
    39372947 Assembly1
    rna:1A:6~2897 702,783~784,899~900,1407~1409,
    1418,1429~1430,1442A,1473~1475
    ,1483~1484,1492~1496,1517
    13910 9dfe:2A
    (2.6Å)

    2867 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF02540
    RF02541
    RF02543
    RF00002
    Thermus
    thermophilus
    HB8

    300852
    39372947 Assembly2
    rna:2B:1~120 861~864,915~919,958
    rna:2a:4~1533 1689,1700~1704,1832,1836~1837,
    1846,1848,1895,1912~1916,1919~
    1920,1947~1950,1959~1961,2863~
    2864
    13911 9dfe:2B
    (2.6Å)

    120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF00001 Thermus
    thermophilus
    HB8

    300852
    39372947 Assembly2
    rna:2A:6~2897 78~81,90,97~98,100~102
    13912 9dfe:2a
    (2.6Å)

    1504 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF00177
    RF01959
    RF02542
    RF01960
    Thermus
    thermophilus
    HB8

    300852
    39372947 Assembly2
    rna:2A:6~2897 702,783~784,899~900,1407~1409,
    1418~1420,1429~1430,1442A,1473
    ~1475,1483~1484,1491~1496,1517
    13913 9dll:A

    13 N/A N/A N/A Homo
    sapiens

    9606
    N/A Assembly1
    rna:B:14 1~13
    13914 9dll:B

    13 N/A N/A N/A Homo
    sapiens

    9606
    N/A Assembly1
    rna:A:1~13 14~26
    13915 9dtr:2
    (2.31Å)

    132 GO:0045131 (F) pre-mRNA branch point b...
    GO:0000348 (P) mRNA branch site recogn...
    GO:0005686 (C) U2 snRNP
    N/A RF00004 Saccharomyces
    cerevisiae

    4932
    38746449 Assembly1
    rna:6:1~102 4~13,16~17,21~23,26~30
    rna:E:-14~21 27~28
    rna:I:1~95 33~48
    13916 9dtr:5
    (2.31Å)

    173 GO:0000244 (P) spliceosomal tri-snRNP ...
    GO:0000353 (P) formation of quadruple ...
    GO:0005682 (C) U5 snRNP
    GO:0046540 (C) U4/U6 x U5 tri-snRNP co...
    N/A RF00020 Saccharomyces
    cerevisiae

    4932
    38746449 Assembly1
    rna:6:1~102 98~99
    rna:E:-14~21 96~100
    13917 9dtr:6
    (2.31Å)

    102 GO:0030621 (F) U4 snRNA binding
    GO:0000244 (P) spliceosomal tri-snRNP ...
    GO:0000353 (P) formation of quadruple ...
    GO:0005688 (C) U6 snRNP
    GO:0046540 (C) U4/U6 x U5 tri-snRNP co...
    N/A RF00026 Saccharomyces
    cerevisiae

    4932
    38746449
    383
    Assembly1
    rna:2:4~1170 53,55~62,88~89,92~101
    rna:5:2~178 72~73,75
    rna:E:-14~21 59~60,77
    rna:I:1~95 45~51,58~59,79
    13918 9dtr:E
    (2.31Å)

    33 N/A N/A N/A Saccharomyces
    cerevisiae

    4932
    38746449 Assembly1
    rna:5:2~178 -5~-1,1
    rna:6:1~102 -2~-1,1~2
    13919 9dtr:I
    (2.31Å)

    48 N/A N/A N/A Saccharomyces
    cerevisiae

    4932
    38746449
    132

    387

    168

    403
    Assembly1
    rna:2:4~1170 56~69,71~72
    rna:6:1~102 2~8,95
    13920 9e6q:1
    (1.95Å)

    2842 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF02540
    RF02541
    RF02543
    RF00002
    Pyrobaculum
    calidifontis
    JCM
    11548

    410359
    N/A Assembly1
    rna:2:1~129 980~983,1034,1036~1037,1107,11
    22,1147,1153~1154
    13921 9e6q:2
    (1.95Å)

    129 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF00001 Pyrobaculum
    calidifontis
    JCM
    11548

    410359
    N/A Assembly1
    rna:1:1~3024 84~86,91,95,104~109
    13922 9e71:1
    (2.36Å)

    2849 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF02540
    RF02541
    RF02543
    RF00002
    Pyrobaculum
    calidifontis
    JCM
    11548

    410359
    N/A Assembly1
    rna:2:1~129 980~983,1034,1036~1037,1107,11
    22,1147,1153~1154

    rna:4:1~1495 832~834,1847,2034,2039~2040,20
    68~2069,2080~2081
    13923 9e71:2
    (2.36Å)

    129 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF00001 Pyrobaculum
    calidifontis
    JCM
    11548

    410359
    N/A Assembly1
    rna:1:1~3024 84~86,91,95,104~109
    13924 9e71:4
    (2.36Å)

    1430 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF01959
    RF00177
    RF02542
    RF01960
    Pyrobaculum
    calidifontis
    JCM
    11548

    410359
    N/A Assembly1
    rna:1:1~3024 543,722~724,1373~1374,1384,139
    5,1442~1443,1453~1455,1476
    13925 9e7f:1
    (2.53Å)

    2849 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF02540
    RF02541
    RF02543
    RF00002
    Pyrobaculum
    calidifontis
    JCM
    11548

    410359
    N/A Assembly1
    rna:2:1~129 980~983,1034,1036~1037,1107,11
    22,1147,1153~1154

    rna:4:1~1495 832~834,1847,2034,2039~2040,20
    68~2069,2080~2082
    13926 9e7f:2
    (2.53Å)

    129 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF00001 Pyrobaculum
    calidifontis
    JCM
    11548

    410359
    N/A Assembly1
    rna:1:1~3024 84~86,91,95,105~109
    13927 9e7f:4
    (2.53Å)

    1430 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF01959
    RF00177
    RF02542
    RF01960
    Pyrobaculum
    calidifontis
    JCM
    11548

    410359
    N/A Assembly1
    rna:1:1~3024 543,721~723,1384,1395,1442~144
    4,1453~1455,1476
    13928 9ere:T
    (2.82Å)

    52 N/A N/A N/A Homo
    sapiens

    9606
    39627193
    1177

    1226

    1344

    588

    1332
    Assembly1
    rna:U:77~80 3~6,76
    13929 9erf:T
    (2.64Å)

    48 N/A N/A N/A Homo
    sapiens

    9606
    39627193
    1075
    Assembly1
    rna:U:66~69 3~6,65
    13930 9esh:1
    (3.2Å)

    29 N/A N/A N/A Schizosaccharomyces
    pombe

    4896
    39833470 Assembly1
    rna:5:7~108 -5~-2,0
    rna:6:1~92 -2,3~6
    13931 9esh:2
    (3.2Å)

    24 N/A N/A N/A Schizosaccharomyces
    pombe

    4896
    39833470 Assembly1
    rna:6:1~92 3~6,8~9,11~14,19~22,25~28
    13932 9esh:5
    (3.2Å)

    102 GO:0000244 (P) spliceosomal tri-snRNP ...
    GO:0000353 (P) formation of quadruple ...
    GO:0005682 (C) U5 snRNP
    GO:0046540 (C) U4/U6 x U5 tri-snRNP co...
    N/A RF00020 Schizosaccharomyces
    pombe

    4896
    39833470 Assembly1
    rna:1:-15~13 49~53
    rna:6:1~92 51~52
    13933 9esh:6
    (3.2Å)

    92 GO:0030621 (F) U4 snRNA binding
    GO:0000244 (P) spliceosomal tri-snRNP ...
    GO:0000353 (P) formation of quadruple ...
    GO:0005688 (C) U6 snRNP
    GO:0046540 (C) U4/U6 x U5 tri-snRNP co...
    N/A RF00026 Schizosaccharomyces
    pombe

    4896
    39833470 Assembly1
    rna:1:-15~13 36~39,65,67
    rna:2:3~30 41,43~50,73,76~77,79~80,83,86~
    89,91

    rna:5:7~108 61,63~64
    13934 9esi:1
    (3.1Å)

    29 N/A N/A N/A Schizosaccharomyces
    pombe

    4896
    39833470 Assembly1
    rna:5:7~108 -5~-2
    rna:6:1~92 -2,3~6
    13935 9esi:2
    (3.1Å)

    24 N/A N/A N/A Schizosaccharomyces
    pombe

    4896
    39833470 Assembly1
    rna:6:1~92 3~6,8~9,11~14,19~22,25~28
    13936 9esi:5
    (3.1Å)

    102 GO:0000244 (P) spliceosomal tri-snRNP ...
    GO:0000353 (P) formation of quadruple ...
    GO:0005682 (C) U5 snRNP
    GO:0046540 (C) U4/U6 x U5 tri-snRNP co...
    N/A RF00020 Schizosaccharomyces
    pombe

    4896
    39833470 Assembly1
    rna:6:1~92 51~52
    rna:1:-15~13 50~53
    13937 9esi:6
    (3.1Å)

    92 GO:0030621 (F) U4 snRNA binding
    GO:0000244 (P) spliceosomal tri-snRNP ...
    GO:0000353 (P) formation of quadruple ...
    GO:0005688 (C) U6 snRNP
    GO:0046540 (C) U4/U6 x U5 tri-snRNP co...
    N/A RF00026 Schizosaccharomyces
    pombe

    4896
    39833470 Assembly1
    rna:2:3~30 41,43~50,73,76~77,79,83,86~89,
    91

    rna:5:7~108 61,63~64
    rna:1:-15~13 36~39,65,67
    13938 9f1b:A2
    (3.01Å)

    1770 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00023119C9 RF01960
    RF02542
    RF01959
    RF00177
    Oryctolagus
    cuniculus

    9986
    39169182 Assembly1
    rna:AT:1~76 1059,1249,1525~1526,1640~1642
    rna:B5:1~4808 678~679,971,1030,1181,1709~171
    1,1720~1722,1732,1816~1817,182
    5~1829,1850

    rna:AH:1111~1113 1208,1703~1705,1831,1838
    13939 9f1b:AT
    (3.01Å)

    76 N/A N/A N/A Oryctolagus
    cuniculus

    9986
    39169182 Assembly1
    rna:B5:1~4808 12,24~25,74~76
    rna:A2:1~1870 30~32,34,38~41
    13940 9f1b:B5
    (3.01Å)

    3706 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF02543 Oryctolagus
    cuniculus

    9986
    39169182 Assembly1
    rna:AT:1~76 3487,3501~3503,3942~3944,3946,
    4142~4143,4294

    rna:B7:2~120 1675~1677,1680,1731,1733~1734,
    1833,1848,1875,1881

    rna:B8:1~156 1~22,58,146,193~194,339,341~34
    8,350~353,356~357,360,362,379~
    380,415~430,1248~1249,1277~127
    8,1315,2151~2152,2155~2156,217
    6~2177,2198,2287,2315,2329~233
    1,2336,2351,2385~2389,2621~262
    3,3622,4318

    rna:A2:1~1870 1518~1519,2727~2728,3361,3427,
    3444,3491~3492,3494~3495,3498~
    3499,3526~3528,3538~3539,3566
    13941 9f1b:B7
    (3.01Å)

    119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF00001 Oryctolagus
    cuniculus

    9986
    39169182 Assembly1
    rna:B5:1~4808 77~79,84,88,98,100~101,103
    13942 9f1b:B8
    (3.01Å)

    156 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF00002
    RF02540
    Oryctolagus
    cuniculus

    9986
    39169182 Assembly1
    rna:B5:1~4808 1,3~22,24~37,40~41,53~54,68~69
    ,103,108,110~113,115,123~128,1
    36,138~149,151~156
    13943 9f1c:A2
    (3.78Å)

    1770 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00023119C9 RF01960
    RF02542
    RF01959
    RF00177
    Oryctolagus
    cuniculus

    9986
    39169182 Assembly1
    rna:AH:1111~1113 1208,1831
    rna:AT:1~76 1059,1249,1525~1526,1640~1642
    rna:B5:1~4808 971,1030~1031,1181,1709~1711,1
    720,1722,1732,1816,1825,1827~1
    828,1850
    13944 9f1c:AT
    (3.78Å)

    76 N/A N/A N/A Oryctolagus
    cuniculus

    9986
    39169182 Assembly1
    rna:B5:1~4808 12,24,74~76
    rna:A2:1~1870 30~31,34,38,41
    13945 9f1c:B5
    (3.78Å)

    3706 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF02543 Oryctolagus
    cuniculus

    9986
    39169182 Assembly1
    rna:B7:2~120 1675~1677,1680,1731,1733~1734,
    1848,1875,1881

    rna:AT:1~76 3502,3942~3943,4142~4143
    rna:B8:1~156 1~22,58,146,339,341~348,350~35
    3,356~357,360,362,379~380,415~
    430,1248~1249,1277~1278,1315,2
    151~2152,2156,2176,2198,2287,2
    330~2331,2336,2351,2385~2387,2
    389,2621~2622,3622

    rna:A2:1~1870 1518~1520,2727,3361,3444,3491~
    3492,3498~3499,3538
    13946 9f1c:B7
    (3.78Å)

    119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF00001 Oryctolagus
    cuniculus

    9986
    39169182 Assembly1
    rna:B5:1~4808 77~79,84,88,98,100~101,103
    13947 9f1c:B8
    (3.78Å)

    156 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF00002
    RF02540
    Oryctolagus
    cuniculus

    9986
    39169182 Assembly1
    rna:B5:1~4808 3~22,24~37,40~41,53,103,108,11
    2~113,123~128,138~149,151~156
    13948 9f1d:A2
    (3.26Å)

    1770 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00023119C9 RF01960
    RF02542
    RF01959
    RF00177
    Oryctolagus
    cuniculus

    9986
    39169182 Assembly1
    rna:B5:1~4808 678~679,971,1030~1031,1181,170
    9~1711,1720~1722,1732,1816~181
    7,1825,1827~1829,1850

    rna:AH:1111~1113 1208,1831
    rna:AT:1~76 1059,1249,1525~1526,1640~1642
    13949 9f1d:AT
    (3.26Å)

    76 N/A N/A N/A Oryctolagus
    cuniculus

    9986
    39169182 Assembly1
    rna:B5:1~4808 12,24,74~76
    rna:A2:1~1870 30~31,34,38~41
    13950 9f1d:B5
    (3.26Å)

    3706 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF02543 Oryctolagus
    cuniculus

    9986
    39169182 Assembly1
    rna:B7:2~120 1675~1677,1680,1733~1734,1848,
    1875,1881

    rna:AT:1~76 3502,3942~3944,4142~4143,4294
    rna:B8:1~156 1~22,58,146,339,341~348,350~35
    3,356~357,360,362,379~380,415~
    430,1248~1249,1277~1278,1315,2
    151~2152,2155~2156,2176~2177,2
    198,2287,2329~2331,2336,2351~2
    352,2385~2387,2389,2621~2623,3
    622

    rna:A2:1~1870 1518~1520,2727~2728,3361,3427,
    3444,3491~3492,3494~3495,3498~
    3499,3526~3528,3538~3539
    13951 9f1d:B7
    (3.26Å)

    119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF00001 Oryctolagus
    cuniculus

    9986
    39169182 Assembly1
    rna:B5:1~4808 77~79,84,88,98,100~101,103
    13952 9f1d:B8
    (3.26Å)

    156 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF00002
    RF02540
    Oryctolagus
    cuniculus

    9986
    39169182 Assembly1
    rna:B5:1~4808 3~22,24~37,40~41,53~54,103,108
    ,110~113,115,123~128,136,138~1
    49,151~156
    13953 9f2r:R
    (1.959Å)

    15 N/A N/A N/A Influenza
    A
    virus

    11320
    N/A Assembly1
    rna:V:1~16 5~9
    13954 9f2r:V
    (1.959Å)

    16 N/A N/A N/A Influenza
    A
    virus

    11320
    N/A Assembly1
    rna:R:4~18 11~15
    13955 9f37:R
    (1.905Å)

    15 N/A N/A N/A Influenza
    A
    virus

    11320
    N/A Assembly1
    rna:V:1~16 5~9
    13956 9f37:V
    (1.905Å)

    16 N/A N/A N/A Influenza
    A
    virus

    11320
    N/A Assembly1
    rna:R:4~18 11~15
    13957 9f9s:CM
    (2.9Å)

    41 N/A N/A N/A Saccharomyces
    cerevisiae

    4932
    39566505
    31588918

    562
    Assembly1
    rna:CP:1~76 35~37
    rna:S1:1~1799 31~32,34~38,41
    rna:R1:1~1800 4,6~12,22
    rna:DQ:1~77 7~9
    rna:DP:1~76 10~13
    13958 9f9s:CP
    (2.9Å)

    76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS000080E1EA RF00005 Saccharomyces
    cerevisiae

    4932
    39566505
    31588918
    Assembly1
    rna:CM:1~41 34~37
    rna:L1:3~3396 12,74~76
    rna:S1:1~1799 30~32,34,38~41
    13959 9f9s:DP
    (2.9Å)

    76 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Saccharomyces
    cerevisiae

    4932
    39566505
    31588918
    Assembly1
    rna:CM:1~41 34~37
    rna:R1:1~1800 34~37
    rna:M1:3~3396 37~38,56,75~76
    13960 9f9s:DQ
    (2.9Å)

    77 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Saccharomyces
    cerevisiae

    4932
    39566505
    31588918
    Assembly1
    rna:CM:1~41 35~36,38
    rna:R1:1~1800 31~33,35,39~42
    rna:M1:3~3396 20,57,76~77
    13961 9f9s:L1
    (2.9Å)

    3116 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF02540
    RF02541
    RF02543
    Saccharomyces
    cerevisiae

    4932
    39566505
    31588918

    M107_0.6

    M080_0.6

    M299_0.6

    16
    Assembly1
    rna:CP:1~76 2266,2619~2621,2819~2820,2971
    rna:L2:1~158 3~23,59,143,330~337,339~342,34
    5~346,349,351,368~369,404~419,
    656~657,691,1394~1395,1399,141
    9~1420,1441,1530,1558,1584~158
    5,1618,1830~1832,2386,2585,299
    4~2995

    rna:L3:1~121 996~999,1052,1054~1056,1156,11
    71,1197,1203

    rna:S1:1~1799 846~848,1935~1936,2125,2191,21
    96,2207,2255~2259,2262~2263,22
    90~2292,2302~2303
    13962 9f9s:L2
    (2.9Å)

    158 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF00002 Saccharomyces
    cerevisiae

    4932
    39566505
    31588918

    441
    Assembly1
    rna:L1:3~3396 1~22,24~33,35~37,40,53~54,104,
    109,112~115,118,126,129,136,13
    8~155,157
    13963 9f9s:L3
    (2.9Å)

    121 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF00001 Saccharomyces
    cerevisiae

    4932
    39566505
    31588918
    Assembly1
    rna:L1:3~3396 79~82,86,90,100,102~104
    13964 9f9s:M1
    (2.9Å)

    3190 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS000061F377 RF02540
    RF02541
    RF02543
    Saccharomyces
    cerevisiae

    4932
    39566505
    31588918

    M107_0.6

    M080_0.6

    M299_0.6

    16
    Assembly1
    rna:R1:1~1800 846~848,2124~2125,2206,2255~22
    59,2262~2263,2290~2292,2302~23
    04

    rna:M3:1~121 996~998,1052,1054~1055,1156,11
    71,1197,1203

    rna:M2:1~158 3~23,59,330~337,339~342,345~34
    6,349,351,368~369,404~419,656~
    657,691,1394~1395,1398~1399,14
    18~1420,1441,1530,1558,1618~16
    19,1830~1832,2386,2585,2994~29
    95

    rna:DQ:1~77 2454,2484,2764~2765,2793~2794
    rna:DP:1~76 2256,2678,2876,2922,2952~2954
    13965 9f9s:M2
    (2.9Å)

    158 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF00002 Saccharomyces
    cerevisiae

    4932
    39566505
    31588918

    441
    Assembly1
    rna:M1:3~3396 1,3~22,24~33,35~37,40~41,53~54
    ,104,109,112~115,125~126,129,1
    36~157
    13966 9f9s:M3
    (2.9Å)

    121 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF00001 Saccharomyces
    cerevisiae

    4932
    39566505
    31588918
    Assembly1
    rna:M1:3~3396 79~81,86,90,100,102~103
    13967 9f9s:R1
    (2.9Å)

    1758 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF01960
    RF02542
    RF01959
    RF00177
    Saccharomyces
    cerevisiae

    4932
    39566505
    31588918

    101

    441

    M080_0.6

    386

    M107_0.6

    497

    490
    Assembly1
    rna:CM:1~41 489,577,904,1150,1634,1637~163
    8,1755~1756,1761

    rna:M1:3~3396 628,913,971~973,1644~1646,1655
    ~1657,1746~1747,1757~1759,1780

    rna:DQ:1~77 1001,1191,1462~1463,1575~1577,
    1637

    rna:DP:1~76 577,1274,1756
    13968 9f9s:S1
    (2.9Å)

    1771 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF01960
    RF02542
    RF01959
    RF00177
    Saccharomyces
    cerevisiae

    4932
    39566505
    31588918

    101

    441

    M080_0.6

    386

    M107_0.6

    497

    490
    Assembly1
    rna:CM:1~41 904,1150,1634,1637~1638,1640,1
    756,1761

    rna:CP:1~76 1001,1191,1462~1463,1575~1577,
    1637

    rna:L1:3~3396 628~630,913,970~972,995,1123,1
    644~1646,1655~1657,1667,1746~1
    747,1755~1759,1780
    13969 9fbv:A
    (2.4Å)

    1519 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS000081169C RF00177
    RF01959
    RF02542
    RF01960
    Escherichia
    coli
    BW25113

    679895
    38826346 Assembly1
    rna:a:1~2903 702,783~784,899,1407~1409,1418
    ,1420,1428~1429,1473~1475,1483
    ~1484,1493~1496,1517

    rna:X:16~18 926,1400~1402,1498
    rna:Z:2~76 790,966,1229~1230,1338~1340,14
    00
    13970 9fbv:Z
    (2.4Å)

    73 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Escherichia
    coli
    BW25113

    679895
    38826346 Assembly1
    rna:a:1~2903 11~13,24~25,74~76
    rna:X:16~18 34~37
    rna:A:2~1534 30~32,34,38~41
    13971 9fbv:a
    (2.4Å)

    2753 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF02541 Escherichia
    coli
    BW25113

    679895
    38826346 Assembly1
    rna:b:1~119 861~864,915~919,958,2339~2340
    rna:A:2~1534 1689,1700~1704,1832,1836~1837,
    1846,1848,1895,1912~1916,1919~
    1920,1947~1950,1959~1961

    rna:Z:2~76 1907~1909,1922~1924,2063~2064,
    2251~2253,2450~2451,2602
    13972 9fbv:b
    (2.4Å)

    119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF00001 Escherichia
    coli
    BW25113

    679895
    38826346 Assembly1
    rna:a:1~2903 41,78~81,89~90,96~97,99~100
    13973 9fhl:2
    (2.5Å)

    1430 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF01959
    RF00177
    RF01960
    RF02542
    Saccharolobus
    solfataricus
    P2

    273057
    39753558 Assembly1
    rna:5:1~3 889,1364~1365,1455
    rna:s:806~815 682,1488,1490~1496
    rna:4:27~43 749,930,1192~1193,1302~1304,13
    64
    13974 9fhl:4
    (2.5Å)

    17 N/A N/A N/A Saccharolobus
    solfataricus
    P2

    273057
    39753558 Assembly1
    rna:2:1~1496 30~32,34,38,40~41
    rna:5:1~3 34~37
    13975 9fhl:s
    (2.5Å)

    10 N/A N/A N/A Saccharolobus
    solfataricus
    P2

    273057
    39753558 Assembly1
    rna:2:1~1496 807~810,812~813,815
    13976 9fi8:bN
    (3.6Å)

    58 N/A N/A N/A Toxoplasma
    gondii

    5811
    39690155 Assembly1
    rna:hB:2~57 67~69,71,73~74,77,96,101,105~1
    06,108

    rna:hG:5~72 74~82,87~88,90,93,97~98,100,10
    3,112~116,118~119

    rna:hL:9~41 108~109
    rna:hR:6~32 93,98,112~113
    13977 9fi8:hB
    (3.6Å)

    56 N/A N/A N/A Toxoplasma
    gondii

    5811
    39690155 Assembly1
    rna:bN:62~119 13,18,21~22,37,39,41~44,55
    rna:hG:5~72 14,43
    rna:hL:9~41 2~5,9,11~13,31~32,39~40
    13978 9fi8:hD
    (3.6Å)

    15 N/A N/A N/A Toxoplasma
    gondii

    5811
    39690155 Assembly1
    rna:hL:9~41 8,10
    13979 9fi8:hG
    (3.6Å)

    68 N/A N/A N/A Toxoplasma
    gondii

    5811
    39690155 Assembly1
    rna:bN:62~119 13~15,17~18,30~31,33~37,60~68
    rna:hB:2~57 65~66,70
    rna:hL:9~41 68,71
    rna:hR:6~32 6,8~17,19,21,23~26,29
    13980 9fi8:hL
    (3.6Å)

    33 N/A N/A N/A Toxoplasma
    gondii

    5811
    39690155 Assembly1
    rna:bN:62~119 36~38
    rna:hB:2~57 9~10,24~26,31~34,38
    rna:hD:1~15 9,12
    rna:hG:5~72 20~21,24
    13981 9fi8:hR
    (3.6Å)

    27 N/A N/A N/A Toxoplasma
    gondii

    5811
    39690155 Assembly1
    rna:bN:62~119 12~13,17,24~25
    rna:hG:5~72 10~18,20~21,23,25~30
    13982 9fia:b2
    (3.29Å)

    30 N/A N/A N/A Toxoplasma
    gondii

    5811
    39690155 Assembly1
    rna:bN:1~61 20~26,28~29,31,46~48
    rna:bT:1~52 26~27,32,35~41,43~46
    13983 9fia:b4
    (3.29Å)

    27 N/A N/A N/A Toxoplasma
    gondii

    5811
    39690155 Assembly1
    rna:bQ:1~14 11~12,15~18
    13984 9fia:bA
    (3.29Å)

    27 N/A N/A N/A Toxoplasma
    gondii

    5811
    39690155 Assembly1
    rna:bE:1~92 1~13
    rna:bS:1~31 10,24,26
    13985 9fia:bD
    (3.29Å)

    25 N/A N/A N/A Toxoplasma
    gondii

    5811
    39690155 Assembly1
    rna:bJ:8~65 3~5,8~9,12
    rna:bK:1~66 3,5
    rna:bL:1~48 10~12,14~15,18~19
    rna:bR:1~19 15~16,19~23
    13986 9fia:bE
    (3.29Å)

    92 N/A N/A N/A Toxoplasma
    gondii

    5811
    39690155 Assembly1
    rna:bA:1~27 1,3,5~11,13~17
    rna:bN:1~61 23,87~88
    rna:bO:1~115 21~22,24~25,27~31,81,85~86
    rna:bP:1~15 52~53
    rna:bS:1~31 43,85,92
    rna:bT:1~52 32~34,47,58,60~61,78~81
    13987 9fia:bJ
    (3.29Å)

    58 N/A N/A N/A Toxoplasma
    gondii

    5811
    39690155 Assembly1
    rna:bD:3~27 16~17,40~42,51
    rna:bI:1~3 55~56
    rna:bK:1~66 14~15,17~20,24,26~29,41,43,47~
    48,57,59~61
    13988 9fia:bK
    (3.29Å)

    66 N/A N/A N/A Toxoplasma
    gondii

    5811
    39690155 Assembly1
    rna:bD:3~27 54,56~57
    rna:bG:1~4 32~34
    rna:bI:1~3 31~35
    rna:bJ:8~65 24,29,35~36,41~42,46~51,55~56,
    59

    rna:bL:1~48 22,37~38
    rna:bN:1~61 8~10,12~13
    rna:bO:1~115 1~3,11,15~18,20,23~28
    13989 9fia:bL
    (3.29Å)

    48 N/A N/A N/A Toxoplasma
    gondii

    5811
    39690155 Assembly1
    rna:bD:3~27 14~16,42~43
    rna:bK:1~66 36~38
    rna:bO:1~115 6,23~24,34~35
    rna:bR:1~19 1~3,8~9,14
    13990 9fia:bN
    (3.29Å)

    50 N/A N/A N/A Toxoplasma
    gondii

    5811
    39690155 Assembly1
    rna:b2:19~48 15,40,51~55,58~61
    rna:bE:1~92 2~5
    rna:bK:1~66 10,43~44,47~48
    rna:bO:1~115 3,5~9,47
    rna:bR:1~19 33,35
    rna:bT:1~52 15~16,40~41,55~57
    13991 9fia:bO
    (3.29Å)

    115 N/A N/A N/A Toxoplasma
    gondii

    5811
    39690155 Assembly1
    rna:bE:1~92 97,102,104,106~109,112~113
    rna:bK:1~66 4,11~13,48~49,75~80,82,85~87,9
    9

    rna:bL:1~48 16~17,83,111
    rna:bN:1~61 94~96,98,100~103,113
    13992 9fia:bP
    (3.29Å)

    15 N/A N/A N/A Toxoplasma
    gondii

    5811
    39690155 Assembly1
    rna:bE:1~92 8~10
    13993 9fia:bQ
    (3.29Å)

    14 N/A N/A N/A Toxoplasma
    gondii

    5811
    39690155 Assembly1
    rna:b4:1~27 3~5,7,10~11
    13994 9fia:bR
    (3.29Å)

    19 N/A N/A N/A Toxoplasma
    gondii

    5811
    39690155 Assembly1
    rna:bD:3~27 1~4,6
    rna:bL:1~48 6,13,15~17
    rna:bN:1~61 10,12
    13995 9fia:bS
    (3.29Å)

    31 N/A N/A N/A Toxoplasma
    gondii

    5811
    39690155 Assembly1
    rna:bA:1~27 5,8,11,16~17
    rna:bE:1~92 10,23,25,27
    rna:bK:1~66 30~31
    13996 9fia:bT
    (3.29Å)

    52 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF02542 Toxoplasma
    gondii

    5811
    39690155 Assembly1
    rna:b2:19~48 3~7,9,11~12,14~17,33
    rna:bE:1~92 12,21,26~27,37~38,40~42,44
    rna:bN:1~61 1,3~5,17~19
    13997 9fmd:2
    (3.3Å)

    120 GO:0045131 (F) pre-mRNA branch point b...
    GO:0000348 (P) mRNA branch site recogn...
    GO:0005686 (C) U2 snRNP
    URS0000E60B75 RF00004 Homo
    sapiens

    9606
    38925148
    30705154

    M068_0.6

    504

    M055_0.6

    97
    Assembly1
    rna:6:1~97 1~12,16~17,19~22,25~28
    rna:IN:1~167 31~33,35~46
    13998 9fmd:5
    (3.3Å)

    92 GO:0000244 (P) spliceosomal tri-snRNP ...
    GO:0000353 (P) formation of quadruple ...
    GO:0005682 (C) U5 snRNP
    GO:0046540 (C) U4/U6 x U5 tri-snRNP co...
    N/A RF00020 Homo
    sapiens

    9606
    38925148
    30705154

    M150_0.6

    42

    M025_0.6

    M075_0.6

    185

    s67

    M158_0.6
    Assembly1
    rna:6:1~97 42~43
    rna:EX:-12~2 40~44
    13999 9fmd:6
    (3.3Å)

    97 GO:0030621 (F) U4 snRNA binding
    GO:0000244 (P) spliceosomal tri-snRNP ...
    GO:0000353 (P) formation of quadruple ...
    GO:0005688 (C) U6 snRNP
    GO:0046540 (C) U4/U6 x U5 tri-snRNP co...
    N/A RF00026 Homo
    sapiens

    9606
    38925148
    30705154

    1334

    1124

    s59

    M021_0.6
    Assembly1
    rna:2:1~184 47,49~56,80,82~83,87~88,90~97
    rna:5:9~115 67,69~70
    rna:EX:-12~2 53~54,71
    rna:IN:1~167 29~45,52,73
    14000 9fmd:EX
    (3.3Å)

    14 N/A N/A N/A Human
    adenovirus
    2

    10515
    38925148
    30705154
    Assembly1
    rna:5:9~115 -5~-1,1
    rna:6:1~97 -2~-1,1~2
    << < 130 131 132 133 134 135 136 137 138 139 140 141 142 143 > >>
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    Reference:
  • Chengxin Zhang, P. Lydia Freddolino (2023) FURNA: a database for function annotations of RNA structures, bioRxiv 2023.12.19.572314.
  • lydsfumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218