| # | PDB (Resolution) |
Length | EC number & GO term |
RNAcentral | Rfam | Taxon | PubMed | ATtRACT motif |
Ligand & binding nucleotides |
|---|---|---|---|---|---|---|---|---|---|
| 13901 |
9dfd:2B (2.6Å) |
120 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
N/A | RF00001 | Thermus thermophilus HB8 300852 |
39372947 | Assembly2 rna:2A:6~2897 78~81,90,97~98,100~102 |
|
| 13902 |
9dfd:2a (2.6Å) |
1503 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
N/A | RF00177 RF01959 RF02542 RF01960 |
Thermus thermophilus HB8 300852 |
39372947 | Assembly2 rna:2A:6~2897 702,783~784,899,1407~1409,1418 ,1429~1430,1442A,1473~1475,148 3~1484,1494~1496,1517 rna:2v:12~24 926,1196,1397,1400~1402,1492~1 493,1498,1503,1505,1507 rna:2w:2~76 530~531,1054,1493 rna:2x:1~76 790,966,1229~1230,1338~1340,14 00 rna:2y:1~76 693~694 |
|
| 13903 |
9dfd:2v (2.6Å) |
13 | N/A | N/A | N/A | Tequatrovirus T4 10665 |
39372947 | Assembly2 rna:2a:4~1532 13,15~20,22~24 rna:2w:2~76 19~21 rna:2x:1~76 16~18 |
|
| 13904 |
9dfd:2w (2.6Å) |
72 | GO:0030533 (F) triplet codon-amino aci... | N/A | RF00005 | Escherichia coli 562 |
39372947 | Assembly2 rna:2A:6~2897 37~38,56,64,74~76 rna:2a:4~1532 34~37 rna:2v:12~24 34~37 |
|
| 13905 |
9dfd:2x (2.6Å) |
77 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS000041AF00 | RF00005 | Escherichia coli 562 |
39372947 | Assembly2 rna:2A:6~2897 11~13,24~25,74~76 rna:2a:4~1532 30~32,34,38~41 rna:2v:12~24 34~37 |
|
| 13906 |
9dfd:2y (2.6Å) |
73 | GO:0030533 (F) triplet codon-amino aci... | N/A | RF00005 | Escherichia coli 562 |
39372947 | Assembly2 rna:2A:6~2897 3,19,56,71~72,76 rna:2a:4~1532 37~38 rna:2x:1~76 35~36 |
|
| 13907 |
9dfe:1A (2.6Å) |
2872 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
N/A | RF02540 RF02541 RF02543 RF00002 |
Thermus thermophilus HB8 300852 |
39372947 | Assembly1 rna:1B:1~120 861~864,915,917~919,958 rna:1a:4~1533 1689,1700~1704,1832,1836~1837, 1846,1848,1895,1912~1916,1919~ 1920,1947~1949,1959~1961,2863~ 2864 |
|
| 13908 |
9dfe:1B (2.6Å) |
120 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
N/A | RF00001 | Thermus thermophilus HB8 300852 |
39372947 | Assembly1 rna:1A:6~2897 78~81,90,97~98,100~102 |
|
| 13909 |
9dfe:1a (2.6Å) |
1500 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
N/A | RF00177 RF01959 RF02542 RF01960 |
Thermus thermophilus HB8 300852 |
39372947 | Assembly1 rna:1A:6~2897 702,783~784,899~900,1407~1409, 1418,1429~1430,1442A,1473~1475 ,1483~1484,1492~1496,1517 |
|
| 13910 |
9dfe:2A (2.6Å) |
2867 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
N/A | RF02540 RF02541 RF02543 RF00002 |
Thermus thermophilus HB8 300852 |
39372947 | Assembly2 rna:2B:1~120 861~864,915~919,958 rna:2a:4~1533 1689,1700~1704,1832,1836~1837, 1846,1848,1895,1912~1916,1919~ 1920,1947~1950,1959~1961,2863~ 2864 |
|
| 13911 |
9dfe:2B (2.6Å) |
120 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
N/A | RF00001 | Thermus thermophilus HB8 300852 |
39372947 | Assembly2 rna:2A:6~2897 78~81,90,97~98,100~102 |
|
| 13912 |
9dfe:2a (2.6Å) |
1504 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
N/A | RF00177 RF01959 RF02542 RF01960 |
Thermus thermophilus HB8 300852 |
39372947 | Assembly2 rna:2A:6~2897 702,783~784,899~900,1407~1409, 1418~1420,1429~1430,1442A,1473 ~1475,1483~1484,1491~1496,1517 |
|
| 13913 |
9dll:A |
13 | N/A | N/A | N/A | Homo sapiens 9606 |
N/A | Assembly1 rna:B:14 1~13 |
|
| 13914 |
9dll:B |
13 | N/A | N/A | N/A | Homo sapiens 9606 |
N/A | Assembly1 rna:A:1~13 14~26 |
|
| 13915 |
9dtr:2 (2.31Å) |
132 | GO:0045131 (F) pre-mRNA branch point b... GO:0000348 (P) mRNA branch site recogn... GO:0005686 (C) U2 snRNP |
N/A | RF00004 | Saccharomyces cerevisiae 4932 |
38746449 | Assembly1 rna:6:1~102 4~13,16~17,21~23,26~30 rna:E:-14~21 27~28 rna:I:1~95 33~48 |
|
| 13916 |
9dtr:5 (2.31Å) |
173 | GO:0000244 (P) spliceosomal tri-snRNP ... GO:0000353 (P) formation of quadruple ... GO:0005682 (C) U5 snRNP GO:0046540 (C) U4/U6 x U5 tri-snRNP co... |
N/A | RF00020 | Saccharomyces cerevisiae 4932 |
38746449 | Assembly1 rna:6:1~102 98~99 rna:E:-14~21 96~100 |
|
| 13917 |
9dtr:6 (2.31Å) |
102 | GO:0030621 (F) U4 snRNA binding GO:0000244 (P) spliceosomal tri-snRNP ... GO:0000353 (P) formation of quadruple ... GO:0005688 (C) U6 snRNP GO:0046540 (C) U4/U6 x U5 tri-snRNP co... |
N/A | RF00026 | Saccharomyces cerevisiae 4932 |
38746449 |  383 |
Assembly1 rna:2:4~1170 53,55~62,88~89,92~101 rna:5:2~178 72~73,75 rna:E:-14~21 59~60,77 rna:I:1~95 45~51,58~59,79 |
| 13918 |
9dtr:E (2.31Å) |
33 | N/A | N/A | N/A | Saccharomyces cerevisiae 4932 |
38746449 | Assembly1 rna:5:2~178 -5~-1,1 rna:6:1~102 -2~-1,1~2 |
|
| 13919 |
9dtr:I (2.31Å) |
48 | N/A | N/A | N/A | Saccharomyces cerevisiae 4932 |
38746449 |  132  387  168  403 |
Assembly1 rna:2:4~1170 56~69,71~72 rna:6:1~102 2~8,95 |
| 13920 |
9e6q:1 (1.95Å) |
2842 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
N/A | RF02540 RF02541 RF02543 RF00002 |
Pyrobaculum calidifontis JCM 11548 410359 |
N/A | Assembly1 rna:2:1~129 980~983,1034,1036~1037,1107,11 22,1147,1153~1154 |
|
| 13921 |
9e6q:2 (1.95Å) |
129 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
N/A | RF00001 | Pyrobaculum calidifontis JCM 11548 410359 |
N/A | Assembly1 rna:1:1~3024 84~86,91,95,104~109 |
|
| 13922 |
9e71:1 (2.36Å) |
2849 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
N/A | RF02540 RF02541 RF02543 RF00002 |
Pyrobaculum calidifontis JCM 11548 410359 |
N/A | Assembly1 rna:2:1~129 980~983,1034,1036~1037,1107,11 22,1147,1153~1154 rna:4:1~1495 832~834,1847,2034,2039~2040,20 68~2069,2080~2081 |
|
| 13923 |
9e71:2 (2.36Å) |
129 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
N/A | RF00001 | Pyrobaculum calidifontis JCM 11548 410359 |
N/A | Assembly1 rna:1:1~3024 84~86,91,95,104~109 |
|
| 13924 |
9e71:4 (2.36Å) |
1430 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
N/A | RF01959 RF00177 RF02542 RF01960 |
Pyrobaculum calidifontis JCM 11548 410359 |
N/A | Assembly1 rna:1:1~3024 543,722~724,1373~1374,1384,139 5,1442~1443,1453~1455,1476 |
|
| 13925 |
9e7f:1 (2.53Å) |
2849 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
N/A | RF02540 RF02541 RF02543 RF00002 |
Pyrobaculum calidifontis JCM 11548 410359 |
N/A | Assembly1 rna:2:1~129 980~983,1034,1036~1037,1107,11 22,1147,1153~1154 rna:4:1~1495 832~834,1847,2034,2039~2040,20 68~2069,2080~2082 |
|
| 13926 |
9e7f:2 (2.53Å) |
129 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
N/A | RF00001 | Pyrobaculum calidifontis JCM 11548 410359 |
N/A | Assembly1 rna:1:1~3024 84~86,91,95,105~109 |
|
| 13927 |
9e7f:4 (2.53Å) |
1430 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
N/A | RF01959 RF00177 RF02542 RF01960 |
Pyrobaculum calidifontis JCM 11548 410359 |
N/A | Assembly1 rna:1:1~3024 543,721~723,1384,1395,1442~144 4,1453~1455,1476 |
|
| 13928 |
9ere:T (2.82Å) |
52 | N/A | N/A | N/A | Homo sapiens 9606 |
39627193 |  1177  1226  1344  588  1332 |
Assembly1 rna:U:77~80 3~6,76 |
| 13929 |
9erf:T (2.64Å) |
48 | N/A | N/A | N/A | Homo sapiens 9606 |
39627193 |  1075 |
Assembly1 rna:U:66~69 3~6,65 |
| 13930 |
9esh:1 (3.2Å) |
29 | N/A | N/A | N/A | Schizosaccharomyces pombe 4896 |
39833470 | Assembly1 rna:5:7~108 -5~-2,0 rna:6:1~92 -2,3~6 |
|
| 13931 |
9esh:2 (3.2Å) |
24 | N/A | N/A | N/A | Schizosaccharomyces pombe 4896 |
39833470 | Assembly1 rna:6:1~92 3~6,8~9,11~14,19~22,25~28 |
|
| 13932 |
9esh:5 (3.2Å) |
102 | GO:0000244 (P) spliceosomal tri-snRNP ... GO:0000353 (P) formation of quadruple ... GO:0005682 (C) U5 snRNP GO:0046540 (C) U4/U6 x U5 tri-snRNP co... |
N/A | RF00020 | Schizosaccharomyces pombe 4896 |
39833470 | Assembly1 rna:1:-15~13 49~53 rna:6:1~92 51~52 |
|
| 13933 |
9esh:6 (3.2Å) |
92 | GO:0030621 (F) U4 snRNA binding GO:0000244 (P) spliceosomal tri-snRNP ... GO:0000353 (P) formation of quadruple ... GO:0005688 (C) U6 snRNP GO:0046540 (C) U4/U6 x U5 tri-snRNP co... |
N/A | RF00026 | Schizosaccharomyces pombe 4896 |
39833470 | Assembly1 rna:1:-15~13 36~39,65,67 rna:2:3~30 41,43~50,73,76~77,79~80,83,86~ 89,91 rna:5:7~108 61,63~64 |
|
| 13934 |
9esi:1 (3.1Å) |
29 | N/A | N/A | N/A | Schizosaccharomyces pombe 4896 |
39833470 | Assembly1 rna:5:7~108 -5~-2 rna:6:1~92 -2,3~6 |
|
| 13935 |
9esi:2 (3.1Å) |
24 | N/A | N/A | N/A | Schizosaccharomyces pombe 4896 |
39833470 | Assembly1 rna:6:1~92 3~6,8~9,11~14,19~22,25~28 |
|
| 13936 |
9esi:5 (3.1Å) |
102 | GO:0000244 (P) spliceosomal tri-snRNP ... GO:0000353 (P) formation of quadruple ... GO:0005682 (C) U5 snRNP GO:0046540 (C) U4/U6 x U5 tri-snRNP co... |
N/A | RF00020 | Schizosaccharomyces pombe 4896 |
39833470 | Assembly1 rna:6:1~92 51~52 rna:1:-15~13 50~53 |
|
| 13937 |
9esi:6 (3.1Å) |
92 | GO:0030621 (F) U4 snRNA binding GO:0000244 (P) spliceosomal tri-snRNP ... GO:0000353 (P) formation of quadruple ... GO:0005688 (C) U6 snRNP GO:0046540 (C) U4/U6 x U5 tri-snRNP co... |
N/A | RF00026 | Schizosaccharomyces pombe 4896 |
39833470 | Assembly1 rna:2:3~30 41,43~50,73,76~77,79,83,86~89, 91 rna:5:7~108 61,63~64 rna:1:-15~13 36~39,65,67 |
|
| 13938 |
9f1b:A2 (3.01Å) |
1770 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
URS00023119C9 | RF01960 RF02542 RF01959 RF00177 |
Oryctolagus cuniculus 9986 |
39169182 | Assembly1 rna:AT:1~76 1059,1249,1525~1526,1640~1642 rna:B5:1~4808 678~679,971,1030,1181,1709~171 1,1720~1722,1732,1816~1817,182 5~1829,1850 rna:AH:1111~1113 1208,1703~1705,1831,1838 |
|
| 13939 |
9f1b:AT (3.01Å) |
76 | N/A | N/A | N/A | Oryctolagus cuniculus 9986 |
39169182 | Assembly1 rna:B5:1~4808 12,24~25,74~76 rna:A2:1~1870 30~32,34,38~41 |
|
| 13940 |
9f1b:B5 (3.01Å) |
3706 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
N/A | RF02543 | Oryctolagus cuniculus 9986 |
39169182 | Assembly1 rna:AT:1~76 3487,3501~3503,3942~3944,3946, 4142~4143,4294 rna:B7:2~120 1675~1677,1680,1731,1733~1734, 1833,1848,1875,1881 rna:B8:1~156 1~22,58,146,193~194,339,341~34 8,350~353,356~357,360,362,379~ 380,415~430,1248~1249,1277~127 8,1315,2151~2152,2155~2156,217 6~2177,2198,2287,2315,2329~233 1,2336,2351,2385~2389,2621~262 3,3622,4318 rna:A2:1~1870 1518~1519,2727~2728,3361,3427, 3444,3491~3492,3494~3495,3498~ 3499,3526~3528,3538~3539,3566 |
|
| 13941 |
9f1b:B7 (3.01Å) |
119 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
N/A | RF00001 | Oryctolagus cuniculus 9986 |
39169182 | Assembly1 rna:B5:1~4808 77~79,84,88,98,100~101,103 |
|
| 13942 |
9f1b:B8 (3.01Å) |
156 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
N/A | RF00002 RF02540 |
Oryctolagus cuniculus 9986 |
39169182 | Assembly1 rna:B5:1~4808 1,3~22,24~37,40~41,53~54,68~69 ,103,108,110~113,115,123~128,1 36,138~149,151~156 |
|
| 13943 |
9f1c:A2 (3.78Å) |
1770 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
URS00023119C9 | RF01960 RF02542 RF01959 RF00177 |
Oryctolagus cuniculus 9986 |
39169182 | Assembly1 rna:AH:1111~1113 1208,1831 rna:AT:1~76 1059,1249,1525~1526,1640~1642 rna:B5:1~4808 971,1030~1031,1181,1709~1711,1 720,1722,1732,1816,1825,1827~1 828,1850 |
|
| 13944 |
9f1c:AT (3.78Å) |
76 | N/A | N/A | N/A | Oryctolagus cuniculus 9986 |
39169182 | Assembly1 rna:B5:1~4808 12,24,74~76 rna:A2:1~1870 30~31,34,38,41 |
|
| 13945 |
9f1c:B5 (3.78Å) |
3706 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
N/A | RF02543 | Oryctolagus cuniculus 9986 |
39169182 | Assembly1 rna:B7:2~120 1675~1677,1680,1731,1733~1734, 1848,1875,1881 rna:AT:1~76 3502,3942~3943,4142~4143 rna:B8:1~156 1~22,58,146,339,341~348,350~35 3,356~357,360,362,379~380,415~ 430,1248~1249,1277~1278,1315,2 151~2152,2156,2176,2198,2287,2 330~2331,2336,2351,2385~2387,2 389,2621~2622,3622 rna:A2:1~1870 1518~1520,2727,3361,3444,3491~ 3492,3498~3499,3538 |
|
| 13946 |
9f1c:B7 (3.78Å) |
119 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
N/A | RF00001 | Oryctolagus cuniculus 9986 |
39169182 | Assembly1 rna:B5:1~4808 77~79,84,88,98,100~101,103 |
|
| 13947 |
9f1c:B8 (3.78Å) |
156 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
N/A | RF00002 RF02540 |
Oryctolagus cuniculus 9986 |
39169182 | Assembly1 rna:B5:1~4808 3~22,24~37,40~41,53,103,108,11 2~113,123~128,138~149,151~156 |
|
| 13948 |
9f1d:A2 (3.26Å) |
1770 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
URS00023119C9 | RF01960 RF02542 RF01959 RF00177 |
Oryctolagus cuniculus 9986 |
39169182 | Assembly1 rna:B5:1~4808 678~679,971,1030~1031,1181,170 9~1711,1720~1722,1732,1816~181 7,1825,1827~1829,1850 rna:AH:1111~1113 1208,1831 rna:AT:1~76 1059,1249,1525~1526,1640~1642 |
|
| 13949 |
9f1d:AT (3.26Å) |
76 | N/A | N/A | N/A | Oryctolagus cuniculus 9986 |
39169182 | Assembly1 rna:B5:1~4808 12,24,74~76 rna:A2:1~1870 30~31,34,38~41 |
|
| 13950 |
9f1d:B5 (3.26Å) |
3706 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
N/A | RF02543 | Oryctolagus cuniculus 9986 |
39169182 | Assembly1 rna:B7:2~120 1675~1677,1680,1733~1734,1848, 1875,1881 rna:AT:1~76 3502,3942~3944,4142~4143,4294 rna:B8:1~156 1~22,58,146,339,341~348,350~35 3,356~357,360,362,379~380,415~ 430,1248~1249,1277~1278,1315,2 151~2152,2155~2156,2176~2177,2 198,2287,2329~2331,2336,2351~2 352,2385~2387,2389,2621~2623,3 622 rna:A2:1~1870 1518~1520,2727~2728,3361,3427, 3444,3491~3492,3494~3495,3498~ 3499,3526~3528,3538~3539 |
|
| 13951 |
9f1d:B7 (3.26Å) |
119 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
N/A | RF00001 | Oryctolagus cuniculus 9986 |
39169182 | Assembly1 rna:B5:1~4808 77~79,84,88,98,100~101,103 |
|
| 13952 |
9f1d:B8 (3.26Å) |
156 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
N/A | RF00002 RF02540 |
Oryctolagus cuniculus 9986 |
39169182 | Assembly1 rna:B5:1~4808 3~22,24~37,40~41,53~54,103,108 ,110~113,115,123~128,136,138~1 49,151~156 |
|
| 13953 |
9f2r:R (1.959Å) |
15 | N/A | N/A | N/A | Influenza A virus 11320 |
N/A | Assembly1 rna:V:1~16 5~9 |
|
| 13954 |
9f2r:V (1.959Å) |
16 | N/A | N/A | N/A | Influenza A virus 11320 |
N/A | Assembly1 rna:R:4~18 11~15 |
|
| 13955 |
9f37:R (1.905Å) |
15 | N/A | N/A | N/A | Influenza A virus 11320 |
N/A | Assembly1 rna:V:1~16 5~9 |
|
| 13956 |
9f37:V (1.905Å) |
16 | N/A | N/A | N/A | Influenza A virus 11320 |
N/A | Assembly1 rna:R:4~18 11~15 |
|
| 13957 |
9f9s:CM (2.9Å) |
41 | N/A | N/A | N/A | Saccharomyces cerevisiae 4932 |
39566505 31588918 |
 562 |
Assembly1 rna:CP:1~76 35~37 rna:S1:1~1799 31~32,34~38,41 rna:R1:1~1800 4,6~12,22 rna:DQ:1~77 7~9 rna:DP:1~76 10~13 |
| 13958 |
9f9s:CP (2.9Å) |
76 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS000080E1EA | RF00005 | Saccharomyces cerevisiae 4932 |
39566505 31588918 |
Assembly1 rna:CM:1~41 34~37 rna:L1:3~3396 12,74~76 rna:S1:1~1799 30~32,34,38~41 |
|
| 13959 |
9f9s:DP (2.9Å) |
76 | GO:0030533 (F) triplet codon-amino aci... | N/A | RF00005 | Saccharomyces cerevisiae 4932 |
39566505 31588918 |
Assembly1 rna:CM:1~41 34~37 rna:R1:1~1800 34~37 rna:M1:3~3396 37~38,56,75~76 |
|
| 13960 |
9f9s:DQ (2.9Å) |
77 | GO:0030533 (F) triplet codon-amino aci... | N/A | RF00005 | Saccharomyces cerevisiae 4932 |
39566505 31588918 |
Assembly1 rna:CM:1~41 35~36,38 rna:R1:1~1800 31~33,35,39~42 rna:M1:3~3396 20,57,76~77 |
|
| 13961 |
9f9s:L1 (2.9Å) |
3116 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
N/A | RF02540 RF02541 RF02543 |
Saccharomyces cerevisiae 4932 |
39566505 31588918 |
 M107_0.6  M080_0.6  M299_0.6  16 |
Assembly1 rna:CP:1~76 2266,2619~2621,2819~2820,2971 rna:L2:1~158 3~23,59,143,330~337,339~342,34 5~346,349,351,368~369,404~419, 656~657,691,1394~1395,1399,141 9~1420,1441,1530,1558,1584~158 5,1618,1830~1832,2386,2585,299 4~2995 rna:L3:1~121 996~999,1052,1054~1056,1156,11 71,1197,1203 rna:S1:1~1799 846~848,1935~1936,2125,2191,21 96,2207,2255~2259,2262~2263,22 90~2292,2302~2303 |
| 13962 |
9f9s:L2 (2.9Å) |
158 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
N/A | RF00002 | Saccharomyces cerevisiae 4932 |
39566505 31588918 |
 441 |
Assembly1 rna:L1:3~3396 1~22,24~33,35~37,40,53~54,104, 109,112~115,118,126,129,136,13 8~155,157 |
| 13963 |
9f9s:L3 (2.9Å) |
121 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
N/A | RF00001 | Saccharomyces cerevisiae 4932 |
39566505 31588918 |
Assembly1 rna:L1:3~3396 79~82,86,90,100,102~104 |
|
| 13964 |
9f9s:M1 (2.9Å) |
3190 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
URS000061F377 | RF02540 RF02541 RF02543 |
Saccharomyces cerevisiae 4932 |
39566505 31588918 |
M107_0.6 M080_0.6 M299_0.6 16 |
Assembly1 rna:R1:1~1800 846~848,2124~2125,2206,2255~22 59,2262~2263,2290~2292,2302~23 04 rna:M3:1~121 996~998,1052,1054~1055,1156,11 71,1197,1203 rna:M2:1~158 3~23,59,330~337,339~342,345~34 6,349,351,368~369,404~419,656~ 657,691,1394~1395,1398~1399,14 18~1420,1441,1530,1558,1618~16 19,1830~1832,2386,2585,2994~29 95 rna:DQ:1~77 2454,2484,2764~2765,2793~2794 rna:DP:1~76 2256,2678,2876,2922,2952~2954 |
| 13965 |
9f9s:M2 (2.9Å) |
158 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
N/A | RF00002 | Saccharomyces cerevisiae 4932 |
39566505 31588918 |
441 |
Assembly1 rna:M1:3~3396 1,3~22,24~33,35~37,40~41,53~54 ,104,109,112~115,125~126,129,1 36~157 |
| 13966 |
9f9s:M3 (2.9Å) |
121 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
N/A | RF00001 | Saccharomyces cerevisiae 4932 |
39566505 31588918 |
Assembly1 rna:M1:3~3396 79~81,86,90,100,102~103 |
|
| 13967 |
9f9s:R1 (2.9Å) |
1758 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
N/A | RF01960 RF02542 RF01959 RF00177 |
Saccharomyces cerevisiae 4932 |
39566505 31588918 |
 101 441 M080_0.6  386 M107_0.6  497  490 |
Assembly1 rna:CM:1~41 489,577,904,1150,1634,1637~163 8,1755~1756,1761 rna:M1:3~3396 628,913,971~973,1644~1646,1655 ~1657,1746~1747,1757~1759,1780 rna:DQ:1~77 1001,1191,1462~1463,1575~1577, 1637 rna:DP:1~76 577,1274,1756 |
| 13968 |
9f9s:S1 (2.9Å) |
1771 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
N/A | RF01960 RF02542 RF01959 RF00177 |
Saccharomyces cerevisiae 4932 |
39566505 31588918 |
101 441 M080_0.6 386 M107_0.6 497 490 |
Assembly1 rna:CM:1~41 904,1150,1634,1637~1638,1640,1 756,1761 rna:CP:1~76 1001,1191,1462~1463,1575~1577, 1637 rna:L1:3~3396 628~630,913,970~972,995,1123,1 644~1646,1655~1657,1667,1746~1 747,1755~1759,1780 |
| 13969 |
9fbv:A (2.4Å) |
1519 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
URS000081169C | RF00177 RF01959 RF02542 RF01960 |
Escherichia coli BW25113 679895 |
38826346 | Assembly1 rna:a:1~2903 702,783~784,899,1407~1409,1418 ,1420,1428~1429,1473~1475,1483 ~1484,1493~1496,1517 rna:X:16~18 926,1400~1402,1498 rna:Z:2~76 790,966,1229~1230,1338~1340,14 00 |
|
| 13970 |
9fbv:Z (2.4Å) |
73 | GO:0030533 (F) triplet codon-amino aci... | N/A | RF00005 | Escherichia coli BW25113 679895 |
38826346 | Assembly1 rna:a:1~2903 11~13,24~25,74~76 rna:X:16~18 34~37 rna:A:2~1534 30~32,34,38~41 |
|
| 13971 |
9fbv:a (2.4Å) |
2753 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
N/A | RF02541 | Escherichia coli BW25113 679895 |
38826346 | Assembly1 rna:b:1~119 861~864,915~919,958,2339~2340 rna:A:2~1534 1689,1700~1704,1832,1836~1837, 1846,1848,1895,1912~1916,1919~ 1920,1947~1950,1959~1961 rna:Z:2~76 1907~1909,1922~1924,2063~2064, 2251~2253,2450~2451,2602 |
|
| 13972 |
9fbv:b (2.4Å) |
119 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
N/A | RF00001 | Escherichia coli BW25113 679895 |
38826346 | Assembly1 rna:a:1~2903 41,78~81,89~90,96~97,99~100 |
|
| 13973 |
9fhl:2 (2.5Å) |
1430 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
N/A | RF01959 RF00177 RF01960 RF02542 |
Saccharolobus solfataricus P2 273057 |
39753558 | Assembly1 rna:5:1~3 889,1364~1365,1455 rna:s:806~815 682,1488,1490~1496 rna:4:27~43 749,930,1192~1193,1302~1304,13 64 |
|
| 13974 |
9fhl:4 (2.5Å) |
17 | N/A | N/A | N/A | Saccharolobus solfataricus P2 273057 |
39753558 | Assembly1 rna:2:1~1496 30~32,34,38,40~41 rna:5:1~3 34~37 |
|
| 13975 |
9fhl:s (2.5Å) |
10 | N/A | N/A | N/A | Saccharolobus solfataricus P2 273057 |
39753558 | Assembly1 rna:2:1~1496 807~810,812~813,815 |
|
| 13976 |
9fi8:bN (3.6Å) |
58 | N/A | N/A | N/A | Toxoplasma gondii 5811 |
39690155 | Assembly1 rna:hB:2~57 67~69,71,73~74,77,96,101,105~1 06,108 rna:hG:5~72 74~82,87~88,90,93,97~98,100,10 3,112~116,118~119 rna:hL:9~41 108~109 rna:hR:6~32 93,98,112~113 |
|
| 13977 |
9fi8:hB (3.6Å) |
56 | N/A | N/A | N/A | Toxoplasma gondii 5811 |
39690155 | Assembly1 rna:bN:62~119 13,18,21~22,37,39,41~44,55 rna:hG:5~72 14,43 rna:hL:9~41 2~5,9,11~13,31~32,39~40 |
|
| 13978 |
9fi8:hD (3.6Å) |
15 | N/A | N/A | N/A | Toxoplasma gondii 5811 |
39690155 | Assembly1 rna:hL:9~41 8,10 |
|
| 13979 |
9fi8:hG (3.6Å) |
68 | N/A | N/A | N/A | Toxoplasma gondii 5811 |
39690155 | Assembly1 rna:bN:62~119 13~15,17~18,30~31,33~37,60~68 rna:hB:2~57 65~66,70 rna:hL:9~41 68,71 rna:hR:6~32 6,8~17,19,21,23~26,29 |
|
| 13980 |
9fi8:hL (3.6Å) |
33 | N/A | N/A | N/A | Toxoplasma gondii 5811 |
39690155 | Assembly1 rna:bN:62~119 36~38 rna:hB:2~57 9~10,24~26,31~34,38 rna:hD:1~15 9,12 rna:hG:5~72 20~21,24 |
|
| 13981 |
9fi8:hR (3.6Å) |
27 | N/A | N/A | N/A | Toxoplasma gondii 5811 |
39690155 | Assembly1 rna:bN:62~119 12~13,17,24~25 rna:hG:5~72 10~18,20~21,23,25~30 |
|
| 13982 |
9fia:b2 (3.29Å) |
30 | N/A | N/A | N/A | Toxoplasma gondii 5811 |
39690155 | Assembly1 rna:bN:1~61 20~26,28~29,31,46~48 rna:bT:1~52 26~27,32,35~41,43~46 |
|
| 13983 |
9fia:b4 (3.29Å) |
27 | N/A | N/A | N/A | Toxoplasma gondii 5811 |
39690155 | Assembly1 rna:bQ:1~14 11~12,15~18 |
|
| 13984 |
9fia:bA (3.29Å) |
27 | N/A | N/A | N/A | Toxoplasma gondii 5811 |
39690155 | Assembly1 rna:bE:1~92 1~13 rna:bS:1~31 10,24,26 |
|
| 13985 |
9fia:bD (3.29Å) |
25 | N/A | N/A | N/A | Toxoplasma gondii 5811 |
39690155 | Assembly1 rna:bJ:8~65 3~5,8~9,12 rna:bK:1~66 3,5 rna:bL:1~48 10~12,14~15,18~19 rna:bR:1~19 15~16,19~23 |
|
| 13986 |
9fia:bE (3.29Å) |
92 | N/A | N/A | N/A | Toxoplasma gondii 5811 |
39690155 | Assembly1 rna:bA:1~27 1,3,5~11,13~17 rna:bN:1~61 23,87~88 rna:bO:1~115 21~22,24~25,27~31,81,85~86 rna:bP:1~15 52~53 rna:bS:1~31 43,85,92 rna:bT:1~52 32~34,47,58,60~61,78~81 |
|
| 13987 |
9fia:bJ (3.29Å) |
58 | N/A | N/A | N/A | Toxoplasma gondii 5811 |
39690155 | Assembly1 rna:bD:3~27 16~17,40~42,51 rna:bI:1~3 55~56 rna:bK:1~66 14~15,17~20,24,26~29,41,43,47~ 48,57,59~61 |
|
| 13988 |
9fia:bK (3.29Å) |
66 | N/A | N/A | N/A | Toxoplasma gondii 5811 |
39690155 | Assembly1 rna:bD:3~27 54,56~57 rna:bG:1~4 32~34 rna:bI:1~3 31~35 rna:bJ:8~65 24,29,35~36,41~42,46~51,55~56, 59 rna:bL:1~48 22,37~38 rna:bN:1~61 8~10,12~13 rna:bO:1~115 1~3,11,15~18,20,23~28 |
|
| 13989 |
9fia:bL (3.29Å) |
48 | N/A | N/A | N/A | Toxoplasma gondii 5811 |
39690155 | Assembly1 rna:bD:3~27 14~16,42~43 rna:bK:1~66 36~38 rna:bO:1~115 6,23~24,34~35 rna:bR:1~19 1~3,8~9,14 |
|
| 13990 |
9fia:bN (3.29Å) |
50 | N/A | N/A | N/A | Toxoplasma gondii 5811 |
39690155 | Assembly1 rna:b2:19~48 15,40,51~55,58~61 rna:bE:1~92 2~5 rna:bK:1~66 10,43~44,47~48 rna:bO:1~115 3,5~9,47 rna:bR:1~19 33,35 rna:bT:1~52 15~16,40~41,55~57 |
|
| 13991 |
9fia:bO (3.29Å) |
115 | N/A | N/A | N/A | Toxoplasma gondii 5811 |
39690155 | Assembly1 rna:bE:1~92 97,102,104,106~109,112~113 rna:bK:1~66 4,11~13,48~49,75~80,82,85~87,9 9 rna:bL:1~48 16~17,83,111 rna:bN:1~61 94~96,98,100~103,113 |
|
| 13992 |
9fia:bP (3.29Å) |
15 | N/A | N/A | N/A | Toxoplasma gondii 5811 |
39690155 | Assembly1 rna:bE:1~92 8~10 |
|
| 13993 |
9fia:bQ (3.29Å) |
14 | N/A | N/A | N/A | Toxoplasma gondii 5811 |
39690155 | Assembly1 rna:b4:1~27 3~5,7,10~11 |
|
| 13994 |
9fia:bR (3.29Å) |
19 | N/A | N/A | N/A | Toxoplasma gondii 5811 |
39690155 | Assembly1 rna:bD:3~27 1~4,6 rna:bL:1~48 6,13,15~17 rna:bN:1~61 10,12 |
|
| 13995 |
9fia:bS (3.29Å) |
31 | N/A | N/A | N/A | Toxoplasma gondii 5811 |
39690155 | Assembly1 rna:bA:1~27 5,8,11,16~17 rna:bE:1~92 10,23,25,27 rna:bK:1~66 30~31 |
|
| 13996 |
9fia:bT (3.29Å) |
52 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
N/A | RF02542 | Toxoplasma gondii 5811 |
39690155 | Assembly1 rna:b2:19~48 3~7,9,11~12,14~17,33 rna:bE:1~92 12,21,26~27,37~38,40~42,44 rna:bN:1~61 1,3~5,17~19 |
|
| 13997 |
9fmd:2 (3.3Å) |
120 | GO:0045131 (F) pre-mRNA branch point b... GO:0000348 (P) mRNA branch site recogn... GO:0005686 (C) U2 snRNP |
URS0000E60B75 | RF00004 | Homo sapiens 9606 |
38925148 30705154 |
 M068_0.6  504  M055_0.6  97 |
Assembly1 rna:6:1~97 1~12,16~17,19~22,25~28 rna:IN:1~167 31~33,35~46 |
| 13998 |
9fmd:5 (3.3Å) |
92 | GO:0000244 (P) spliceosomal tri-snRNP ... GO:0000353 (P) formation of quadruple ... GO:0005682 (C) U5 snRNP GO:0046540 (C) U4/U6 x U5 tri-snRNP co... |
N/A | RF00020 | Homo sapiens 9606 |
38925148 30705154 |
 M150_0.6  42  M025_0.6  M075_0.6  185  s67  M158_0.6 |
Assembly1 rna:6:1~97 42~43 rna:EX:-12~2 40~44 |
| 13999 |
9fmd:6 (3.3Å) |
97 | GO:0030621 (F) U4 snRNA binding GO:0000244 (P) spliceosomal tri-snRNP ... GO:0000353 (P) formation of quadruple ... GO:0005688 (C) U6 snRNP GO:0046540 (C) U4/U6 x U5 tri-snRNP co... |
N/A | RF00026 | Homo sapiens 9606 |
38925148 30705154 |
 1334  1124  s59  M021_0.6 |
Assembly1 rna:2:1~184 47,49~56,80,82~83,87~88,90~97 rna:5:9~115 67,69~70 rna:EX:-12~2 53~54,71 rna:IN:1~167 29~45,52,73 |
| 14000 |
9fmd:EX (3.3Å) |
14 | N/A | N/A | N/A | Human adenovirus 2 10515 |
38925148 30705154 |
Assembly1 rna:5:9~115 -5~-1,1 rna:6:1~97 -2~-1,1~2 |
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14210 RNAs.
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Reference: