SEQ2FUN

FURNA
Download all results in tab-seperated text for 16611 RNAs.
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  • Hover over Ligand to view the name of the ligand and the ligand-binding nucleotides on the RNA.

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    # PDB
    (Resolution)    		 Length EC number
    & GO term     		RNAcentral Rfam Taxon PubMed ATtRACT
    motif     		Ligand &
    binding nucleotides
    14001 8z8u:A
    (2.71Å)
    		 41 N/A URS0003402226 N/A Homo
    9605    		 39721592 Assembly1
    rna:B:1~41 6~10,12~13,30~35
    rna:B-2:1~41 8~9,11
    14002 8z8u:B
    (2.71Å)
    		 41 N/A URS0003402226 N/A Homo
    9605    		 39721592 Assembly1
    rna:A:1~41 7~11,13,29~35
    rna:A-2:1~41 12,23~24
    14003 8z8x:D
    (3.06Å)
    		 18 N/A URS0002915767 N/A Thogoto
    virus
    (isolate
    SiAr
    126)
    126796    		 38816392 Assembly1
    rna:E:1~17 11~18
    14004 8z8x:E
    (3.06Å)
    		 17 N/A URS000291575B N/A Thogoto
    virus
    (isolate
    SiAr
    126)
    126796    		 38816392 Assembly1
    rna:D:1~18 1~9
    14005 8z90:D
    (2.87Å)
    		 18 N/A URS0002915767 N/A Thogoto
    virus
    (isolate
    SiAr
    126)
    126796    		 38816392 Assembly1
    rna:E:1~17 11~18
    14006 8z90:E
    (2.87Å)
    		 17 N/A URS000291575B N/A Thogoto
    virus
    (isolate
    SiAr
    126)
    126796    		 38816392 Assembly1
    rna:D:1~18 1~9
    14007 8z97:F
    (2.65Å)
    		 13 N/A URS000291575B N/A Thogoto
    virus
    (isolate
    SiAr
    126)
    126796    		 38816392 Assembly1
    rna:G:2 8~17
    14008 8z99:M
    (3.2Å)
    		 54 N/A URS00029EB35A N/A metagenome
    256318    		 39143216 Assembly1
    rna:N:-16~37 1~4,6~10,12~16,18~22,24~28,30~
    34,36~40
    14009 8z99:N
    (3.2Å)
    		 46 N/A URS00029EB31B N/A metagenome
    256318    		 39143216 Assembly1
    rna:M:-9~45 -3~1,3~7,9~13,15~31,33~36
    14010 8z9c:M
    (3.01Å)
    		 48 N/A URS00029EB35A N/A metagenome
    256318    		 39143216 Assembly1
    rna:N:-16~37 1~4,6~10,12~16,18~22,24~28,30~
    34
    14011 8z9c:N
    (3.01Å)
    		 41 N/A URS00029EB321 N/A metagenome
    256318    		 39143216 Assembly1
    rna:M:-9~39 3~31,33~36
    14012 8z9e:M
    (3.13Å)
    		 39 N/A URS00029EB35A N/A metagenome
    256318    		 39143216 Assembly1
    rna:N:-16~37 1~4,6~10,12~16,18~22,24~28
    14013 8z9e:N
    (3.13Å)
    		 34 N/A URS00029EB31B N/A metagenome
    256318    		 39143216 Assembly1
    rna:M:-9~30 9~25,27~31,33~36
    14014 8z9h:F
    (2.7Å)
    		 13 N/A URS000291575B N/A Thogoto
    virus
    (isolate
    SiAr
    126)
    126796    		 38816392 Assembly1
    rna:G:2~10 8~17
    14015 8z9k:A
    (3.86Å)
    		 41 N/A URS000340222C N/A Homo
    9605    		 39721592 Assembly1
    rna:B:1~41 6~10,12~13,30~35
    14016 8z9k:B
    (3.86Å)
    		 41 N/A URS000340222C N/A Homo
    9605    		 39721592 Assembly1
    rna:A:1~41 7~11,13,29~34
    14017 8z9r:F
    (2.58Å)
    		 13 N/A URS000291575B N/A Thogoto
    virus
    (isolate
    SiAr
    126)
    126796    		 38816392 Assembly1
    rna:G:1~10 8~17
    14018 8z9r:G
    (2.58Å)
    		 10 N/A URS0002915768 N/A Thogoto
    virus
    (isolate
    SiAr
    126)
    126796    		 38816392 Assembly1
    rna:F:5~17 1~10
    14019 8za0:A
    (1.96Å)
    		 15 N/A URS000340220D N/A Homo
    sapiens
    9606    		 39721592
    659    		 Assembly1
    rna:B:1~16 1~15
    14020 8za0:B
    (1.96Å)
    		 16 N/A URS000340221F N/A Homo
    sapiens
    9606    		 39721592 Assembly1
    rna:A:1~15 1~5,7~16
    14021 8za0:C
    (1.96Å)
    		 15 N/A URS000340220D N/A Homo
    sapiens
    9606    		 39721592
    659    		 Assembly1
    rna:A:1~15 10~11
    rna:B:1~16 8~9
    rna:D:1~16 1~15
    14022 8za0:D
    (1.96Å)
    		 16 N/A URS000340221F N/A Homo
    sapiens
    9606    		 39721592 Assembly1
    rna:B:1~16 9~10
    rna:C:1~15 1~5,7~16
    14023 8za0:E
    (1.96Å)
    		 15 N/A URS000340220D N/A Homo
    sapiens
    9606    		 39721592
    659    		 Assembly1
    rna:F:1~16 1~15
    14024 8za0:F
    (1.96Å)
    		 16 N/A URS000340221F N/A Homo
    sapiens
    9606    		 39721592 Assembly1
    rna:E:1~15 1~5,7~16
    14025 8za4:A
    (2.85Å)
    		 15 N/A URS000340220D N/A Homo
    sapiens
    9606    		 39721592
    659    		 Assembly1
    rna:B:1~16 1~15
    14026 8za4:B
    (2.85Å)
    		 16 N/A URS0003402228 N/A Homo
    sapiens
    9606    		 39721592 Assembly1
    rna:A:1~15 1~5,7~16
    14027 8za4:C
    (2.85Å)
    		 15 N/A URS000340220D N/A Homo
    sapiens
    9606    		 39721592
    659    		 Assembly1
    rna:A:1~15 10~11
    rna:B:1~16 8~9
    rna:D:1~16 1~15
    14028 8za4:D
    (2.85Å)
    		 16 N/A URS0003402228 N/A Homo
    sapiens
    9606    		 39721592 Assembly1
    rna:B:1~16 9~10
    rna:C:1~15 1~5,7~16
    14029 8za4:E
    (2.85Å)
    		 15 N/A URS000340220D N/A Homo
    sapiens
    9606    		 39721592
    659    		 Assembly1
    rna:F:1~16 1~15
    14030 8za4:F
    (2.85Å)
    		 16 N/A URS0003402228 N/A Homo
    sapiens
    9606    		 39721592 Assembly1
    rna:E:1~15 1~5,7~16
    14031 8zej:A
    (2.69Å)
    		 1533 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00000ABFE9 RF00177 Escherichia
    coli
    562    		 N/A Assembly1
    rna:X:1~76 694,1383
    rna:Y:1~77 966,1338~1340,1400
    rna:Z:1~77 530,1054,1493
    rna:b:2~2903 702,784,1407~1409,1418,1429,14
    83~1484,1493~1495,1517
    rna:x:10~23 693,926,1400~1401,1492,1498
    14032 8zej:X
    (2.69Å)
    		 76 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Escherichia
    coli
    562    		 N/A Assembly1
    rna:A:1~1533 34,38
    rna:b:2~2903 3,17,19,56~57,70~71,75~76
    rna:x:10~23 35~37
    14033 8zej:Y
    (2.69Å)
    		 77 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Escherichia
    coli
    562    		 N/A Assembly1
    rna:A:1~1533 32,35,42
    rna:b:2~2903 12,75~77
    rna:x:10~23 35~37
    14034 8zej:Z
    (2.69Å)
    		 77 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Escherichia
    coli
    562    		 N/A Assembly1
    rna:A:1~1533 35~38
    rna:b:2~2903 20,38,57,64,75~77
    rna:x:10~23 35~38
    14035 8zej:a
    (2.69Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00001 Escherichia
    coli
    562    		 N/A Assembly1
    rna:b:2~2903 41,78~80,89,97,99~100
    14036 8zej:b
    (2.69Å)
    		 2902 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02541 Escherichia
    coli
    562    		 N/A Assembly1
    rna:A:1~1533 1703,1837,1847~1848,1912~1913,
    1915~1916,1919~1920,1947~1948,
    1959~1960
    rna:X:1~76 1851,1893,2112,2168,2180,2394,
    2421~2422,2432
    rna:Y:1~77 1923,2064,2251~2252,2450~2451,
    2602
    rna:Z:1~77 896~897,1913,1942,2482,2506~25
    07,2553~2555,2583~2585
    rna:a:1~120 861~863,918,958,2340
    14037 8zej:x
    (2.69Å)
    		 14 N/A N/A N/A Escherichia
    coli
    562    		 N/A Assembly1
    rna:A:1~1533 12,15~17,19
    rna:X:1~76 12~13
    rna:Y:1~77 15~17
    rna:Z:1~77 18~20
    14038 8zff:A
    (2.59Å)
    		 1512 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00177 Escherichia
    coli
    BW25113
    679895    		 N/A Assembly1
    rna:a:1~2903 702,784,899,1407~1409,1418,142
    9,1473~1475,1483~1484,1492,149
    4~1496,1517
    rna:X:37~42 693,926,1400~1402,1498
    rna:Z:1~77 790,966,1229~1230,1338~1340,14
    00
    14039 8zff:Z
    (2.59Å)
    		 77 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Escherichia
    coli
    BW25113
    679895    		 N/A Assembly1
    rna:A:1~1534 31~33,35,39,41~42
    rna:a:1~2903 12~13,25~26,75~77
    rna:X:37~42 35~38
    14040 8zff:a
    (2.59Å)
    		 2761 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02541 Escherichia
    coli
    BW25113
    679895    		 N/A Assembly1
    rna:A:1~1534 1700~1704,1832,1836~1837,1846,
    1848,1912~1913,1915~1916,1919~
    1920,1947~1948,1959~1961
    rna:b:1~119 861~864,915,917~919,958,2339~2
    340
    rna:Z:1~77 1907~1909,1922~1924,2063,2251~
    2252,2255,2450~2451,2585,2602
    14041 8zff:b
    (2.59Å)
    		 119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00001 Escherichia
    coli
    BW25113
    679895    		 N/A Assembly1
    rna:a:1~2903 41,78~81,89,96~97,99~100
    14042 8zfg:A
    (2.68Å)
    		 1512 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00177 Escherichia
    coli
    BW25113
    679895    		 N/A Assembly1
    rna:a:1~2903 702,784,899,1407~1409,1418,142
    9,1473~1474,1483~1484,1492,149
    4~1496,1517
    rna:X:37~42 693,926,1400~1402,1498
    rna:Z:1~77 790,966,1229~1230,1338~1340,14
    00
    14043 8zfg:Z
    (2.68Å)
    		 77 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Escherichia
    coli
    BW25113
    679895    		 N/A Assembly1
    rna:A:1~1534 31~33,35,39~42
    rna:a:1~2903 11~12,25~26,75~77
    rna:X:37~42 35~38
    14044 8zfg:a
    (2.68Å)
    		 2761 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02541 Escherichia
    coli
    BW25113
    679895    		 N/A Assembly1
    rna:A:1~1534 1700~1703,1832,1837,1846,1848,
    1912~1916,1919~1920,1947~1948,
    1959~1961
    rna:b:1~119 861~863,915,917~919,958,2339~2
    340
    rna:Z:1~77 1907~1909,1922~1923,2251~2253,
    2255,2450~2451,2602
    14045 8zfg:b
    (2.68Å)
    		 119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00001 Escherichia
    coli
    BW25113
    679895    		 N/A Assembly1
    rna:a:1~2903 41,78~81,89~90,96~97,99~100
    14046 8zfi:A
    (2.9Å)
    		 1533 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00000ABFE9 RF00177 Escherichia
    coli
    562    		 N/A Assembly1
    rna:X:1~76 693~694
    rna:Y:1~77 966,1229~1230,1338~1339,1400
    rna:Z:1~77 1054,1493
    rna:b:1~2903 702,1407~1408,1418,1474~1475,1
    483,1493~1495,1517
    rna:x:10~23 693,1195~1196,1397,1492~1493,1
    498
    14047 8zfi:X
    (2.9Å)
    		 76 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Escherichia
    coli
    562    		 N/A Assembly1
    rna:A:1~1533 38~39
    rna:b:1~2903 19,56~57,71,75~76
    rna:x:10~23 34~37
    14048 8zfi:Y
    (2.9Å)
    		 77 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Escherichia
    coli
    562    		 N/A Assembly1
    rna:A:1~1533 31,35,41~42
    rna:b:1~2903 75~77
    rna:x:10~23 35~38
    14049 8zfi:Z
    (2.9Å)
    		 77 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Escherichia
    coli
    562    		 N/A Assembly1
    rna:A:1~1533 35,37~38
    rna:b:1~2903 20,64,75~77
    rna:x:10~23 35~38
    14050 8zfi:a
    (2.9Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00001 Escherichia
    coli
    562    		 N/A Assembly1
    rna:b:1~2903 41,78~80,89,96,99~100
    14051 8zfi:b
    (2.9Å)
    		 2903 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02541 Escherichia
    coli
    562    		 N/A Assembly1
    rna:A:1~1533 1700~1701,1846~1848,1912~1913,
    1919~1920,1947~1948,1959
    rna:X:1~76 1851,2112~2113,2168,2394,2421~
    2422,2432
    rna:Y:1~77 2251~2252,2450,2602
    rna:Z:1~77 896,2482,2506~2507,2553~2555,2
    583~2584
    rna:a:1~120 861~863,915,917~918,958,2340
    14052 8zfi:x
    (2.9Å)
    		 14 N/A N/A N/A Escherichia
    coli
    562    		 N/A Assembly1
    rna:A:1~1533 12,15~16,19,21~22
    rna:X:1~76 12~14
    rna:Y:1~77 15~17
    rna:Z:1~77 18~21
    14053 8zgr:LA
    (2.7Å)
    		 3184 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02543 Saccharomyces
    cerevisiae
    S288C
    559292    		 N/A Assembly1
    rna:LB:1~121 995~998,1051~1055,1155,1170,11
    96,1202
    rna:LC:1~158 4~23,59,143,330~337,339~342,34
    5~346,349,351,368~369,404~419,
    655~656,690,1393~1394,1397~139
    8,1417~1419,1440~1441,1529,155
    7,1571,1583~1584,1617~1618,182
    9~1831,2385,2584
    rna:S2:1~1799 845~847,1917~1919,1932~1935,21
    24,2206,2254~2255,2257~2258,22
    61~2262,2264,2289~2291,2301~23
    02
    rna:Ta:1~77 2255,2284,2297,2875,2921~2925,
    2951,2953
    14054 8zgr:LB
    (2.7Å)
    		 121 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00001 Saccharomyces
    cerevisiae
    S288C
    559292    		 N/A Assembly1
    rna:LA:3~3395 79~82,86,90,100,102~104
    14055 8zgr:LC
    (2.7Å)
    		 158 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00002 Saccharomyces
    cerevisiae
    S288C
    559292    		 N/A Assembly1
    rna:LA:3~3395 3~22,24~37,40~41,53~54,104,109
    ,112~115,118,126,129,136~155
    14056 8zgr:S2
    (2.7Å)
    		 1771 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF01960 Saccharomyces
    cerevisiae
    S288C
    559292    		 N/A Assembly1
    rna:LA:3~3395 628,913,971~973,1001~1002,1644
    ~1646,1655~1657,1666~1667,1736
    ,1746~1747,1756~1759,1780
    rna:Ta:1~77 577,1274,1637,1756~1757
    14057 8zgr:Ta
    (2.7Å)
    		 77 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Saccharomyces
    cerevisiae
    S288C
    559292    		 N/A Assembly1
    rna:LA:3~3395 1,38~39,74~77
    rna:S2:1~1799 34,36~38
    14058 8zgy:LA
    (2.8Å)
    		 3184 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02543 Saccharomyces
    cerevisiae
    S288C
    559292    		 N/A Assembly1
    rna:LB:1~121 995~998,1051,1053~1055,1155,11
    70,1196,1202
    rna:LC:1~158 3~23,59,143,330~337,339~342,34
    5~346,349,351,368~369,404~419,
    655~656,690,1393~1394,1397~139
    8,1417~1419,1440,1529,1557,158
    3~1584,1617~1619,1829~1831,238
    5,2584,2994
    rna:S2:1~1799 845~847,1934,2124,2205,2254~22
    56,2258,2260~2262,2289~2291,23
    01~2303
    rna:Tb:1~77 2210,2417,2451
    14059 8zgy:LB
    (2.8Å)
    		 121 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00001 Saccharomyces
    cerevisiae
    S288C
    559292    		 N/A Assembly1
    rna:LA:3~3395 79~82,86,90,100,102~104
    14060 8zgy:LC
    (2.8Å)
    		 158 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00002 Saccharomyces
    cerevisiae
    S288C
    559292    		 N/A Assembly1
    rna:LA:3~3395 1,3~22,24~33,35~37,40~41,53~54
    ,104,109,112~115,125~126,129,1
    36~156
    14061 8zgy:S2
    (2.8Å)
    		 1771 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF01960 Saccharomyces
    cerevisiae
    S288C
    559292    		 N/A Assembly1
    rna:LA:3~3395 628,913,971~973,1644~1646,1655
    ~1657,1667,1746~1747,1757~1759
    ,1780
    rna:Tb:1~77 1001,1191,1462,1575~1577,1637
    rna:mR:13422~13431 1000,1150,1634,1637,1639,1756,
    1761,1769
    14062 8zgy:Tb
    (2.8Å)
    		 77 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Saccharomyces
    cerevisiae
    S288C
    559292    		 N/A Assembly1
    rna:LA:3~3395 57,72~74
    rna:S2:1~1799 31~33,35,39~42
    rna:mR:13422~13431 35~38
    14063 8zgy:mR
    (2.8Å)
    		 10 N/A N/A N/A West
    Nile
    virus
    11082    		 N/A Assembly1
    rna:S2:1~1799 13423~13431
    rna:Tb:1~77 13425~13427
    14064 8zh3:LA
    (2.7Å)
    		 3184 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02543 Saccharomyces
    cerevisiae
    S288C
    559292    		 N/A Assembly1
    rna:LB:1~121 996~999,1052,1054~1056,1156,11
    71,1197,1203
    rna:LC:1~158 3~23,59,143,330~337,339~342,34
    5~346,349,351~352,368~369,404~
    419,656~657,691,1394~1395,1398
    ~1399,1418~1420,1441,1530,1558
    ,1584~1585,1618,1620,1830~1832
    ,2585,2994~2995
    rna:S2:1~1799 846~848,2125,2255~2259,2262~22
    63,2290~2292,2302~2304
    rna:Ta:1~77 2256,2619~2621,2820,2954,2971
    rna:Tb:1~77 2211,2234~2236
    14065 8zh3:LB
    (2.7Å)
    		 121 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00001 Saccharomyces
    cerevisiae
    S288C
    559292    		 N/A Assembly1
    rna:LA:3~3396 79~82,86,90,100,102~104
    14066 8zh3:LC
    (2.7Å)
    		 158 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00002 Saccharomyces
    cerevisiae
    S288C
    559292    		 N/A Assembly1
    rna:LA:3~3396 1,4~22,24~33,35~37,40~41,53~54
    ,104,106,109,112~115,118,125~1
    26,129,136~156
    14067 8zh3:S2
    (2.7Å)
    		 1771 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF01960 Saccharomyces
    cerevisiae
    S288C
    559292    		 N/A Assembly1
    rna:LA:3~3396 628,971~973,1644~1647,1655~165
    7,1746~1747,1757~1759,1780
    rna:Ta:1~77 577,1273~1274,1756
    rna:Tb:1~77 1001,1191,1462~1463,1575~1577,
    1637
    rna:mR:13422~13431 577,904,1150,1634,1637,1755~17
    56,1761
    14068 8zh3:Ta
    (2.7Å)
    		 77 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Saccharomyces
    cerevisiae
    S288C
    559292    		 N/A Assembly1
    rna:LA:3~3396 38~39,75~77
    rna:S2:1~1799 34~38
    rna:mR:13422~13431 35~38
    14069 8zh3:Tb
    (2.7Å)
    		 77 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Saccharomyces
    cerevisiae
    S288C
    559292    		 N/A Assembly1
    rna:LA:3~3396 73~74
    rna:S2:1~1799 30~33,35,39~42
    rna:mR:13422~13431 35~38
    14070 8zh3:mR
    (2.7Å)
    		 10 N/A N/A N/A West
    Nile
    virus
    11082    		 N/A Assembly1
    rna:S2:1~1799 13422,13424~13431
    rna:Ta:1~77 13428~13430
    rna:Tb:1~77 13425~13427
    14071 8zhb:LA
    (2.6Å)
    		 3184 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02543 Saccharomyces
    cerevisiae
    S288C
    559292    		 N/A Assembly1
    rna:LB:1~121 995~997,1000,1052~1055,1136,11
    55,1170,1196,1202
    rna:LC:1~158 4~23,59,181,330~337,339~342,34
    4~346,349,353,368~369,404~419,
    655~656,690,1393~1394,1397~139
    8,1417~1419,1440,1529,1557,158
    3~1584,1617,1829~1831,2385~238
    6,2584,2993
    rna:S2:1~1799 845~847,1933~1934,2123~2124,22
    54~2256,2261~2262,2289~2291,23
    01~2303
    rna:Ta:1~77 1018~1019,2257,2286,2874~2875,
    2921~2923,2951~2953
    rna:Tb:1~77 2208,2235,2417,2493,2763,2792~
    2793
    14072 8zhb:LB
    (2.6Å)
    		 121 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00001 Saccharomyces
    cerevisiae
    S288C
    559292    		 N/A Assembly1
    rna:LA:3~3395 79~83,86,90,100,102,105
    14073 8zhb:LC
    (2.6Å)
    		 158 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00002 Saccharomyces
    cerevisiae
    S288C
    559292    		 N/A Assembly1
    rna:LA:3~3395 1~22,24~33,35~37,40~41,54,94,1
    04,109,112~115,118,126,136~155
    14074 8zhb:S2
    (2.6Å)
    		 1771 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF01960 Saccharomyces
    cerevisiae
    S288C
    559292    		 N/A Assembly1
    rna:LA:3~3395 628,971~973,1644~1645,1647,165
    5~1657,1666~1667,1746~1747,175
    7~1759,1780
    rna:Ta:1~77 577~578,1274,1756
    rna:Tb:1~77 1001,1191,1462~1463,1575~1577
    rna:mR:13421~13431 1000,1150,1634,1637~1638,1756,
    1761,1766,1770
    14075 8zhb:Ta
    (2.6Å)
    		 77 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Saccharomyces
    cerevisiae
    S288C
    559292    		 N/A Assembly1
    rna:LA:3~3395 12,20,58,74~77
    rna:S2:1~1799 35~37
    rna:mR:13421~13431 35~37
    14076 8zhb:Tb
    (2.6Å)
    		 77 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Saccharomyces
    cerevisiae
    S288C
    559292    		 N/A Assembly1
    rna:LA:3~3395 5,18,72~73,77
    rna:S2:1~1799 31,33,35,38~39,41~43
    rna:mR:13421~13431 35~38
    14077 8zhb:mR
    (2.6Å)
    		 11 N/A N/A N/A West
    Nile
    virus
    11082    		 N/A Assembly1
    rna:S2:1~1799 13421,13423~13428,13430
    rna:Ta:1~77 13428~13429
    rna:Tb:1~77 13425~13427
    14078 8zhc:LA
    (2.3Å)
    		 3184 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02543 Saccharomyces
    cerevisiae
    S288C
    559292    		 N/A Assembly1
    rna:LB:1~121 995~998,1051~1055,1155,1170,11
    96,1202
    rna:LC:1~158 3~23,59,143,330~337,339~342,34
    4~346,349,351,368~369,404~417,
    419,655~656,690,1393~1394,1397
    ~1398,1417~1419,1440~1441,1529
    ,1557,1570,1583~1584,1617~1618
    ,1829~1831,2385~2386,2584,2994
    rna:S2:1~1799 845~847,1918,1934~1935,2124,21
    90,2206,2254~2258,2261~2262,22
    64,2289~2291,2301~2303
    rna:Ta:1~77 2265~2266,2404,2618~2620,2622,
    2818~2819,2969~2970
    14079 8zhc:LB
    (2.3Å)
    		 121 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00001 Saccharomyces
    cerevisiae
    S288C
    559292    		 N/A Assembly1
    rna:LA:3~3395 79~82,86,90,100,102~104
    14080 8zhc:LC
    (2.3Å)
    		 158 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00002 Saccharomyces
    cerevisiae
    S288C
    559292    		 N/A Assembly1
    rna:LA:3~3395 1,3~22,24~33,35~37,40~41,53~54
    ,104,109,112~115,126~127,129,1
    36~156
    14081 8zhc:S2
    (2.3Å)
    		 1771 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF01960 Saccharomyces
    cerevisiae
    S288C
    559292    		 N/A Assembly1
    rna:LA:3~3395 628~629,912~913,971~973,1001~1
    002,1123,1644~1647,1655~1657,1
    666~1667,1746~1747,1756~1759,1
    780
    rna:Ta:1~77 1000~1001,1191,1462~1463,1575~
    1577,1637
    rna:mR:13425~13434 577,904,1150,1637~1640,1756,17
    61
    14082 8zhc:Ta
    (2.3Å)
    		 77 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Saccharomyces
    cerevisiae
    S288C
    559292    		 N/A Assembly1
    rna:LA:3~3395 2~3,12,75~77
    rna:S2:1~1799 31~33,35,39~42
    rna:mR:13425~13434 35~38
    14083 8zhc:mR
    (2.3Å)
    		 10 N/A N/A N/A West
    Nile
    virus
    11082    		 N/A Assembly1
    rna:S2:1~1799 13425,13427~13430,13432,13434
    rna:Ta:1~77 13428~13430
    14084 8ztu:A
    (2.9Å)
    		 1507 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00000ABFE9 RF00177 Escherichia
    coli
    562    		 40057501 Assembly1
    rna:a:1~2903 702,784,899,1407~1409,1418,142
    8~1429,1473~1475,1483~1484,149
    3~1496,1517
    rna:X:13~21 530,693,926,1400~1403,1492~149
    3,1498
    rna:Y:1~76 790,966,1229~1230,1338~1340,14
    00
    14085 8ztu:Y
    (2.9Å)
    		 73 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000009EE82 RF00005 Escherichia
    coli
    562    		 40057501 Assembly1
    rna:A:1~1533 30~32,34,38~41
    rna:a:1~2903 11~12,74~76
    rna:X:13~21 34~37
    14086 8ztu:a
    (2.9Å)
    		 2753 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B0F34 RF02541 Escherichia
    coli
    562    		 40057501 Assembly1
    rna:A:1~1533 1686,1689,1700~1703,1837,1846,
    1848,1912~1913,1915~1916,1919~
    1920,1947~1948,1959~1961
    rna:b:1~119 861~863,915,917~918,958,2340
    rna:Y:1~76 1909,1923,2063,2251~2253,2255,
    2450~2451,2602
    rna:Z:75~76 2394~2395,2421~2422,2432
    14087 8ztu:b
    (2.9Å)
    		 119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000049E57 RF00001 Escherichia
    coli
    562    		 40057501 Assembly1
    rna:a:1~2903 41,78~80,89,96~97,99~100
    14088 8ztv:A
    (2.9Å)
    		 1507 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00000ABFE9 RF00177 Escherichia
    coli
    562    		 40057501 Assembly1
    rna:X:13~21 530,693,926,1400~1403,1492~149
    3,1498
    rna:Y:1~76 790,966,1229~1230,1338~1340,14
    00
    rna:a:1~2903 702,784,899,1407~1409,1418,142
    8~1429,1474~1475,1483~1484,149
    3~1496,1517
    14089 8ztv:Y
    (2.9Å)
    		 71 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000009EE82 RF00005 Escherichia
    coli
    562    		 40057501 Assembly1
    rna:A:1~1533 30~32,34,38,40~41
    rna:X:13~21 34~37
    rna:a:1~2903 11~12,24,74~76
    14090 8ztv:a
    (2.9Å)
    		 2753 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B0F34 RF02541 Escherichia
    coli
    562    		 40057501 Assembly1
    rna:A:1~1533 1689,1700~1703,1837,1846,1848,
    1912~1913,1915~1916,1919~1920,
    1947~1948,1959~1961
    rna:Y:1~76 1908~1909,1923,2251~2253,2255,
    2450~2451,2602
    rna:Z:75~76 2394~2395,2421~2422,2432
    rna:b:1~119 861~863,915,917~918,958,2340
    14091 8ztv:b
    (2.9Å)
    		 119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000049E57 RF00001 Escherichia
    coli
    562    		 40057501 Assembly1
    rna:a:1~2903 41,78~80,89,97,99~100
    14092 9ash:R
    (2.58Å)
    		 37 N/A URS00029EB314 N/A Lactococcus
    lactis
    subsp.
    lactis
    1360    		 38989619 Assembly1
    rna:T:7~28 15~19,21~25,27~31,33,35~37
    14093 9ash:T
    (2.58Å)
    		 22 N/A URS00029EB373 N/A Lactococcus
    lactis
    subsp.
    lactis
    1360    		 38989619 Assembly1
    rna:R:1~37 7~9,11~16,19~22,24~28
    14094 9asi:R
    (2.79Å)
    		 37 N/A URS00029EB314 N/A Lactococcus
    lactis
    subsp.
    lactis
    1360    		 38989619 Assembly1
    rna:T:7~35 9~13,15~19,21~25,27~31,33~35,3
    7
    14095 9asi:T
    (2.79Å)
    		 29 N/A URS00029EB373 N/A Lactococcus
    lactis
    subsp.
    lactis
    1360    		 38989619 Assembly1
    rna:R:1~37 8~10,12~16,18~22,24~28,30~34
    14096 9ax7:A
    (2.63Å)
    		 1519 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00000ABFE9 RF00177 Escherichia
    coli
    562    		 39222680 Assembly1
    rna:X:13~21 693,926,1400~1402,1493,1498
    rna:Z:2~76 790,966,1229~1230,1338~1340,14
    00
    rna:a:1~2903 702,784,899,1407~1409,1418,142
    9,1474~1475,1483~1484,1492~149
    6,1517
    14097 9ax7:Z
    (2.63Å)
    		 75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00029EB308 RF00005 Escherichia
    coli
    562    		 39222680 Assembly1
    rna:A:2~1534 30~32,34,38,40~41
    rna:X:13~21 34~37
    rna:a:1~2903 11~12,24~25,74~76
    14098 9ax7:a
    (2.63Å)
    		 2753 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B0F34 RF02541 Escherichia
    coli
    562    		 39222680 Assembly1
    rna:A:2~1534 1689,1700~1703,1832,1836~1837,
    1846,1848,1895,1912~1913,1915~
    1916,1919~1920,1947~1948,1959~
    1961
    rna:Z:2~76 1907~1909,1922~1923,2063~2064,
    2251~2253,2450~2451,2602
    rna:b:1~119 861~863,915,917~918,958,2340
    14099 9ax7:b
    (2.63Å)
    		 119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000049E57 RF00001 Escherichia
    coli
    562    		 39222680 Assembly1
    rna:a:1~2903 41,78~80,89,97,99~100
    14100 9ax8:A
    (2.6Å)
    		 2854 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00029EB30A RF02541 Escherichia
    coli
    562    		 39222680 Assembly1
    rna:X:2~119 861~863,915,917~918,958
    rna:a:2~1540 1700,1703,1832,1837,1846,1848,
    1912~1914,1916,1919~1920,1947~
    1949,1959~1961
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    Reference:
  • Chengxin Zhang, Lydia Freddolino (2024) "FURNA: a database for function annotations of RNA structures," PLOS Biology 22(7): e3002476.