SEQ2FUN

FURNA
Download all results in tab-seperated text for 16611 RNAs.
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  • Hover over Ligand to view the name of the ligand and the ligand-binding nucleotides on the RNA.

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    # PDB
    (Resolution)    		 Length EC number
    & GO term     		RNAcentral Rfam Taxon PubMed ATtRACT
    motif     		Ligand &
    binding nucleotides
    14201 9bdl:A18S
    (2.8Å)
    		 1691 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00029EB371 RF01960 Oryctolagus
    cuniculus
    9986    		 38718836 Assembly1
    rna:A28S:1~5069 677~678,970,1028~1029,1180,170
    8~1710,1719~1721,1731,1815~181
    6,1824~1828,1849
    rna:MRNA:2~11 626,961,1207,1489,1701~1703,18
    30
    rna:PTRN:1~76 1058,1248,1524,1639~1641,1701
    14202 9bdl:A28S
    (2.8Å)
    		 3557 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00029EB342 RF02543 Oryctolagus
    cuniculus
    9986    		 38718836 Assembly1
    rna:A18S:1~1869 1563~1564,2884~2885,3629,3695,
    3712,3759~3760,3762~3763,3766~
    3767,3794~3796,3806~3808,3834
    rna:A58S:1~156 1~22,58,339,342~348,350~353,35
    6~357,360,362,379~380,415~430,
    1304~1305,1333~1334,1371,2308~
    2309,2312,2333,2355,2444,2472,
    2486~2487,2508~2509,2543~2544,
    2778~2779,3890
    rna:A5S:1~120 1736~1738,1741,1792~1796,1894,
    1909,1936,1942
    rna:ETRN:1~76 3714~3716,3738~3740,3958,4341~
    4342,4370~4371
    rna:PTRN:1~76 3755~3756,3769~3771,4196~4198,
    4396~4397
    14203 9bdl:A58S
    (2.8Å)
    		 151 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B2C76 RF00002 Oryctolagus
    cuniculus
    9986    		 38718836 Assembly1
    rna:A28S:1~5069 3~22,24~37,40~41,53~54,103,108
    ,112~113,126~127,136,138~156
    14204 9bdl:A5S
    (2.8Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000002B0D5 RF00001 Oryctolagus
    cuniculus
    9986    		 38718836 Assembly1
    rna:A28S:1~5069 77~80,84,88,98,100~101,103
    14205 9bdl:ETRN
    (2.8Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    K-12
    83333    		 38718836 Assembly1
    rna:A28S:1~5069 3~4,19,70~72,75~76
    rna:PTRN:1~76 35~36
    14206 9bdl:MRNA
    (2.8Å)
    		 10 N/A URS00023359A7 N/A Oryctolagus
    cuniculus
    9986    		 38718836 Assembly1
    rna:A18S:1~1869 2,5~7,9~11
    rna:PTRN:1~76 5~7
    14207 9bdl:PTRN
    (2.8Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    K-12
    83333    		 38718836 Assembly1
    rna:A18S:1~1869 30~32,34,38,40~41
    rna:A28S:1~5069 11~13,24~25,74~76
    rna:MRNA:2~11 34~37
    14208 9bdn:A18S
    (3.1Å)
    		 1691 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00029EB371 RF01960 Oryctolagus
    cuniculus
    9986    		 38718836 Assembly1
    rna:A28S:1~5069 677~678,970,1029,1052,1180,170
    8~1710,1719~1720,1731,1815~181
    6,1824~1828,1849
    rna:MRNA:2~11 626,961,1207,1331,1489,1698,17
    01~1703,1830
    rna:PTRN:1~76 1058,1248,1524,1639~1641,1701
    rna:TIRN:1~76 50,488
    14209 9bdn:A28S
    (3.1Å)
    		 3557 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00029EB342 RF02543 Oryctolagus
    cuniculus
    9986    		 38718836 Assembly1
    rna:A18S:1~1869 1563~1564,2884,3695,3700,3712,
    3759~3763,3766~3767,3794~3796,
    3806~3807
    rna:A58S:1~156 1~22,58,339,341~348,350~353,35
    6~357,360,362,379~380,415~430,
    1305,1333~1334,1371,2308~2309,
    2312~2313,2333~2334,2355,2444,
    2472,2508,2543~2545,2778~2779
    rna:A5S:1~120 1736~1738,1741,1792~1795,1894,
    1909,1936,1942
    rna:ETRN:1~76 3714~3716,3738~3740,3958,4046,
    4341~4342,4370~4371
    rna:PTRN:1~76 3754,3756,3769~3771,4196~4198,
    4396~4397
    rna:TIRN:1~76 1981,2009
    14210 9bdn:A58S
    (3.1Å)
    		 151 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B2C76 RF00002 Oryctolagus
    cuniculus
    9986    		 38718836 Assembly1
    rna:A28S:1~5069 3~22,24~37,40~41,53~54,103,108
    ,112~113,115,126~127,135~136,1
    38~149,151~156
    14211 9bdn:A5S
    (3.1Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000002B0D5 RF00001 Oryctolagus
    cuniculus
    9986    		 38718836 Assembly1
    rna:A28S:1~5069 77~79,84,88,98,100~101,103
    14212 9bdn:ETRN
    (3.1Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    562    		 38718836 Assembly1
    rna:A28S:1~5069 3~4,19,56,70~72,75~76
    14213 9bdn:MRNA
    (3.1Å)
    		 10 N/A URS00023359A7 N/A Homo
    sapiens
    9606    		 38718836 Assembly1
    rna:A18S:1~1869 2,5~7,9~11
    rna:PTRN:1~76 5~7
    14214 9bdn:PTRN
    (3.1Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    562    		 38718836 Assembly1
    rna:A18S:1~1869 30~32,34,38,40~41
    rna:A28S:1~5069 11~13,24~25,74~76
    rna:MRNA:2~11 34~37
    14215 9bdn:TIRN
    (3.1Å)
    		 71 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00029EB351 RF00005 Saccharomyces
    cerevisiae
    4932    		 38718836 Assembly1
    rna:A28S:1~5069 19,56
    14216 9bdp:A18S
    (3.7Å)
    		 1691 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00029EB371 RF01960 Oryctolagus
    cuniculus
    9986    		 38718836 Assembly1
    rna:A28S:1~5069 677~678,970,1028~1029,1180,170
    8~1710,1719~1721,1731,1815~181
    6,1824~1828,1849
    rna:MRNA:2~11 626,961,1207,1331,1489,1698,17
    01~1703,1825,1830
    rna:PTRN:1~76 1058,1248,1524~1525,1639~1641,
    1701
    14217 9bdp:A28S
    (3.7Å)
    		 3557 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00029EB342 RF02543 Oryctolagus
    cuniculus
    9986    		 38718836 Assembly1
    rna:A18S:1~1869 1563~1564,2884~2885,3629,3712,
    3759~3760,3762~3763,3766~3767,
    3794~3796,3806~3807
    rna:A58S:1~156 1~22,58,146~147,339,342~348,35
    0~353,356~357,360,362,379~380,
    415~430,1305,1333~1334,1371,23
    08~2309,2333,2355,2444~2445,24
    86~2487,2493,2508,2510,2542~25
    45,2778~2779,3890
    rna:A5S:1~120 1736~1738,1741,1792~1795,1909,
    1936
    rna:ETRN:1~76 3714~3715,3738~3740,3958,4046,
    4341~4342,4370~4371
    rna:PTRN:1~76 3769~3771,4196~4198,4397,4548
    rna:TIRN:1~76 1981,2009
    14218 9bdp:A58S
    (3.7Å)
    		 151 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B2C76 RF00002 Oryctolagus
    cuniculus
    9986    		 38718836 Assembly1
    rna:A28S:1~5069 3~22,24~37,40~41,53~54,103,108
    ,110,112~113,124,126~128,136,1
    38~149,151~156
    14219 9bdp:A5S
    (3.7Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000002B0D5 RF00001 Oryctolagus
    cuniculus
    9986    		 38718836 Assembly1
    rna:A28S:1~5069 77~79,84,98,100~101,103
    14220 9bdp:ETRN
    (3.7Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    562    		 38718836 Assembly1
    rna:A28S:1~5069 3~4,19,56,70~72,76
    14221 9bdp:MRNA
    (3.7Å)
    		 10 N/A URS00023359A7 N/A Homo
    sapiens
    9606    		 38718836 Assembly1
    rna:A18S:1~1869 2,4~7,9~11
    rna:PTRN:1~76 5~7
    14222 9bdp:PTRN
    (3.7Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    562    		 38718836 Assembly1
    rna:A18S:1~1869 30~31,34,38~41
    rna:A28S:1~5069 12~13,24~25,74~76
    rna:MRNA:2~11 34~37
    14223 9bdp:TIRN
    (3.7Å)
    		 70 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00029EB351 RF00005 Saccharomyces
    cerevisiae
    4932    		 38718836 Assembly1
    rna:A28S:1~5069 19,56
    14224 9bh5:A5
    (2.63Å)
    		 3022 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00029EB32B RF02543 Caenorhabditis
    elegans
    6239    		 39209556
    392

    145    		 Assembly1
    rna:A7:1~119 1050~1053,1108~1109,1208,1223,
    1249,1255
    rna:A8:2~153 1~22,58,144,183,186,335~343,34
    5~348,351~352,355,357,374~375,
    404,410~425,685~686,721,1458~1
    459,1484,1506,1595~1596,1660~1
    661,1693~1696,2489,2697,3107
    rna:B2:2~1754 901~902,2028~2029,2228~2229,22
    94,2298,2309~2310,2358~2362,23
    65~2366,2393~2395,2405~2407
    rna:DA:1~76 2354,2369~2370,2731~2733,2735,
    2920,2931~2932,3083
    rna:DB:1~76 2359,2388,2963~2964,2987~2988,
    3034~3036,3064~3066
    14225 9bh5:A7
    (2.63Å)
    		 119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000170579 RF00001 Caenorhabditis
    elegans
    6239    		 39209556 Assembly1
    rna:A5:1~3510 77~79,84,88,98,100~102
    14226 9bh5:A8
    (2.63Å)
    		 146 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001218EE RF00002 Caenorhabditis
    elegans
    6239    		 39209556 Assembly1
    rna:A5:1~3510 2~22,24~33,35~37,40,53~54,68,1
    02,107,111,121~122,124~125,132
    ~133,135~136,138~153
    14227 9bh5:B2
    (2.63Å)
    		 1476 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00005A42AA RF01960 Caenorhabditis
    elegans
    6239    		 39209556
    26

    145

    111

    448

    M017_0.6    		 Assembly1
    rna:A5:1~3510 604~605,878,936~937,959,1082,1
    600~1602,1611~1613,1623~1624,1
    700~1701,1711~1713,1734
    rna:DA:1~76 966,1150,1418,1531~1533,1593
    rna:DB:1~76 553~554,1233,1710
    rna:DC:1~10 869,1109,1593~1594,1710,1715
    14228 9bh5:DA
    (2.63Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00029EB34B RF00005 Caenorhabditis
    elegans
    6239    		 39209556 Assembly1
    rna:B2:2~1754 30~32,34,38,40~41
    rna:A5:1~3510 2~3,12~13,24,74~76
    rna:DC:1~10 34~37
    14229 9bh5:DB
    (2.63Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00029EB34B RF00005 Caenorhabditis
    elegans
    6239    		 39209556 Assembly1
    rna:B2:2~1754 34~37
    rna:A5:1~3510 37~38,63,71,74~76
    rna:DC:1~10 34~37
    14230 9bh5:DC
    (2.63Å)
    		 10 N/A N/A N/A Caenorhabditis
    elegans
    6239    		 39209556 Assembly1
    rna:B2:2~1754 1,3~7
    rna:DA:1~76 4~6
    rna:DB:1~76 7~9
    14231 9bih:G
    (3.24Å)
    		 28 N/A URS0003054942 N/A Severe
    acute
    respiratory
    syndrome
    coronavirus
    2
    2697049    		 39755678 Assembly1
    rna:H:8~34 1~13,16~28
    14232 9bih:H
    (3.24Å)
    		 27 N/A URS000305490B N/A Severe
    acute
    respiratory
    syndrome
    coronavirus
    2
    2697049    		 39755678 Assembly1
    rna:G:1~28 8~20,22~34
    14233 9blf:P
    (3.31Å)
    		 29 N/A N/A N/A Severe
    acute
    respiratory
    syndrome
    coronavirus
    2
    2697049    		 N/A Assembly1
    rna:T:2~36 3~31
    14234 9blf:T
    (3.31Å)
    		 35 N/A N/A N/A synthetic
    construct
    32630    		 N/A Assembly1
    rna:P:3~31 8~36
    14235 9bs0:A
    (3.3Å)
    		 2678 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0003054908 RF02541 Bacillus
    subtilis
    subsp.
    subtilis
    str.
    168
    224308    		 39658043 Assembly1
    rna:B:3~114 908~910,965
    14236 9bs0:B
    (3.3Å)
    		 111 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001CC3E3 RF00001 Bacillus
    subtilis
    subsp.
    subtilis
    str.
    168
    224308    		 39658043 Assembly1
    rna:A:3~2925 76~78,94,97~98
    14237 9bss:A
    (3.1Å)
    		 2572 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0003054908 RF02541 Bacillus
    subtilis
    subsp.
    subtilis
    str.
    168
    224308    		 39658043 Assembly1
    rna:B:3~114 908~911,961~965,1004,1073~1074
    14238 9bss:B
    (3.1Å)
    		 112 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001CC3E3 RF00001 Bacillus
    subtilis
    subsp.
    subtilis
    str.
    168
    224308    		 39658043 Assembly1
    rna:A:3~2925 76~78,85,87,95,97~99
    14239 9bup:AA
    (2.7Å)
    		 3193 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02543 Plasmodium
    falciparum
    3D7
    36329    		 40825879 Assembly1
    rna:S7:1~74 2504,2527~2529,3103~3104,3152~
    3153
    rna:SA:1~2090 965~966,2203~2204,2418,2484,24
    88~2489,2500~2501,2548~2549,25
    51~2552,2555~2556,2583~2585,25
    95~2597,2623
    rna:AC:2~157 10~24,59,152,338~345,347~350,3
    53~354,357,359,376~377,408,414
    ~429,707,734~735,772,1542~1543
    ,1546,1567,1590,1727~1728,2092
    ~2093,2097~2099,2679,3353~3354
    ,3568~3570
    rna:AB:2~119 1118~1121,1175,1177~1179,1284,
    1299,1325,1331
    rna:S8:1~76 2544~2545,2558~2559,2699,2958~
    2960,2962,3178~3179,3330
    rna:S9:1~76 2549,2578,3180,3210~3211,3221~
    3222,3234~3235,3281~3283,3311~
    3313
    14240 9bup:AB
    (2.7Å)
    		 118 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00001 Plasmodium
    falciparum
    3D7
    36329    		 40825879 Assembly1
    rna:AA:10~3786 77~80,84,88,98,100~102
    14241 9bup:AC
    (2.7Å)
    		 151 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00002 Plasmodium
    falciparum
    3D7
    36329    		 40825879 Assembly1
    rna:AA:10~3786 2~17,19~26,28~41,44~45,58,107,
    109,111~113,116~118,123,138~14
    0,143~144,146~156
    14242 9bup:S7
    (2.7Å)
    		 74 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000035398D RF00005 Plasmodium
    falciparum
    3D7
    36329    		 40825879 Assembly1
    rna:SA:1~2090 35~36
    rna:AA:10~3786 3~4,68~69,73~74
    rna:mR:15~25 33~35
    14243 9bup:S8
    (2.7Å)
    		 76 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Plasmodium
    falciparum
    3D7
    36329    		 40825879 Assembly1
    rna:SA:1~2090 30~32,34,38,40~41
    rna:AA:10~3786 2,11~12,24~25,74~76
    rna:mR:15~25 34~35,37
    14244 9bup:S9
    (2.7Å)
    		 76 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Plasmodium
    falciparum
    3D7
    36329    		 40825879 Assembly1
    rna:SA:1~2090 34,36
    rna:AA:10~3786 37~38,63,72,74~76
    rna:mR:15~25 34~37
    14245 9bup:SA
    (2.7Å)
    		 1608 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00006B7111 RF01960 Plasmodium
    falciparum
    3D7
    36329    		 40825879 Assembly1
    rna:AA:10~3786 635~636,982,1040~1041,1063~106
    4,1224,1941~1943,1952~1954,196
    4,2038~2039,2048~2051,2072
    rna:S8:1~76 1070,1292,1708~1709,1872~1874,
    1934
    rna:mR:15~25 973,1251,1934~1935,1937,2047~2
    048,2053
    rna:S9:1~76 1375,2048
    14246 9bup:mR
    (2.7Å)
    		 11 N/A N/A N/A Plasmodium
    falciparum
    3D7
    36329    		 40825879 Assembly1
    rna:S7:1~74 16~18
    rna:SA:1~2090 16,19~23
    rna:S8:1~76 19~21
    rna:S9:1~76 22~25
    14247 9buq:AA
    (2.3Å)
    		 3193 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02543 Plasmodium
    falciparum
    3D7
    36329    		 40825879 Assembly1
    rna:S7:1~74 2503~2504,2527~2529,3103~3104,
    3152~3153
    rna:SA:1~2090 965~967,2203~2204,2418,2484,24
    88~2489,2501,2548~2549,2551~25
    52,2555~2556,2583~2585,2595~25
    97,2623
    rna:AC:2~157 10~24,59,152,338~345,347~350,3
    53~354,357,359,376~377,408,414
    ~429,707,734~735,772,1542~1543
    ,1546,1567~1568,1590,1727~1728
    ,2092~2093,2097~2099,2679,3568
    ~3570
    rna:AB:2~119 1118~1121,1175,1177~1179,1284,
    1299,1325,1331
    rna:S9:1~76 2544~2545,2558~2560,2958~2960,
    2962,3178~3179,3330
    14248 9buq:AB
    (2.3Å)
    		 118 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00001 Plasmodium
    falciparum
    3D7
    36329    		 40825879 Assembly1
    rna:AA:10~3786 77~80,84,88,98,100~102
    14249 9buq:AC
    (2.3Å)
    		 151 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00002 Plasmodium
    falciparum
    3D7
    36329    		 40825879 Assembly1
    rna:AA:10~3786 2~26,28~41,44~45,57,107,109,11
    1~113,116~118,123,138~140,143~
    144,146~156
    14250 9buq:S7
    (2.3Å)
    		 74 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000035398D RF00005 Plasmodium
    falciparum
    3D7
    36329    		 40825879 Assembly1
    rna:SA:1~2090 35~36
    rna:AA:10~3786 3~4,68~69,73~74
    rna:mR:15~21 33~35
    14251 9buq:S9
    (2.3Å)
    		 76 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Plasmodium
    falciparum
    3D7
    36329    		 40825879 Assembly1
    rna:SA:1~2090 30~31,34,38,40~41
    rna:AA:10~3786 2,11~12,25,74~76
    rna:mR:15~21 34~35,37
    14252 9buq:SA
    (2.3Å)
    		 1608 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00006B7111 RF01960 Plasmodium
    falciparum
    3D7
    36329    		 40825879 Assembly1
    rna:AA:10~3786 635~636,982,1040~1042,1064,122
    4,1941~1943,1952~1954,1964,203
    8~2039,2047,2049~2051,2072
    rna:S9:1~76 1070,1292,1708~1709,1872~1874,
    1934
    rna:mR:15~21 973,1069,1934~1935,1937,2053
    14253 9bus:AA
    (2.4Å)
    		 3193 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02543 Plasmodium
    falciparum
    3D7
    36329    		 40825879 Assembly1
    rna:S7:1~74 2504,2527~2529,3103~3104,3152~
    3153
    rna:SA:1~2090 965~967,2203~2204,2418,2484,25
    01,2548~2549,2551~2552,2555~25
    56,2583~2585,2595~2597,2623
    rna:AC:2~157 10~24,59,152,338~345,347~350,3
    53~354,357,359,376~377,408,414
    ~429,707,734~735,772,1542~1543
    ,1546,1567~1568,1590,1727~1728
    ,2092~2093,2098~2099,2679,3353
    ~3354,3568~3570
    rna:AB:2~119 1118~1121,1175,1177~1179,1284,
    1299,1325,1331
    14254 9bus:AB
    (2.4Å)
    		 118 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00001 Plasmodium
    falciparum
    3D7
    36329    		 40825879 Assembly1
    rna:AA:10~3786 77~80,84,88,98,100~102
    14255 9bus:AC
    (2.4Å)
    		 151 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00002 Plasmodium
    falciparum
    3D7
    36329    		 40825879 Assembly1
    rna:AA:10~3786 2~26,28~41,44~45,57,107,109,11
    1~112,116~117,123,138~140,143~
    144,146~156
    14256 9bus:S7
    (2.4Å)
    		 74 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000035398D RF00005 Plasmodium
    falciparum
    3D7
    36329    		 40825879 Assembly1
    rna:AA:10~3786 3~4,68~69,73~74
    14257 9bus:SA
    (2.4Å)
    		 1608 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00006B7111 RF01960 Plasmodium
    falciparum
    3D7
    36329    		 40825879 Assembly1
    rna:AA:10~3786 635~636,982,1040~1042,1064,122
    4,1941~1943,1952~1954,1964,203
    8~2039,2047,2049~2051,2072
    14258 9but:AA
    (2.8Å)
    		 3193 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02543 Plasmodium
    falciparum
    3D7
    36329    		 40825879 Assembly1
    rna:S7:1~76 2504,2528~2529,3103~3104,3152~
    3153
    rna:AC:2~157 10~24,59,152,338~345,347~350,3
    52~354,357,359,376~377,408,414
    ~429,706~707,734~735,772,1542~
    1543,1546,1567~1568,1590,1640,
    1727~1728,2092~2093,2098~2099,
    2679,3568~3570
    rna:AB:2~119 1118~1120,1175,1177~1179,1284,
    1299,1325
    rna:SA:1~2090 965~967,2548~2551,2555~2556,25
    83~2585,2595~2597
    rna:S9:1~76 2549,2958~2959,3017,3178~3179,
    3313,3330
    14259 9but:AB
    (2.8Å)
    		 118 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00001 Plasmodium
    falciparum
    3D7
    36329    		 40825879 Assembly1
    rna:AA:10~3786 77~80,84,98,100~101
    14260 9but:AC
    (2.8Å)
    		 151 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00002 Plasmodium
    falciparum
    3D7
    36329    		 40825879 Assembly1
    rna:AA:10~3786 2~5,7~26,28~41,44~45,56~57,107
    ,109,111~112,114,116~117,120,1
    23,138~140,144,146~156
    14261 9but:S7
    (2.8Å)
    		 76 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Plasmodium
    falciparum
    3D7
    36329    		 40825879 Assembly1
    rna:AA:10~3786 3,70~71,75~76
    rna:SA:1~2090 30~32,34,38,40~42
    rna:mR:15~23 34~37
    14262 9but:S9
    (2.8Å)
    		 76 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Plasmodium
    falciparum
    3D7
    36329    		 40825879 Assembly1
    rna:AA:10~3786 37~38,56,74~76
    rna:SA:1~2090 33~35,37
    rna:mR:15~23 33~34,37~38
    14263 9but:SA
    (2.8Å)
    		 1608 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00006B7111 RF01960 Plasmodium
    falciparum
    3D7
    36329    		 40825879 Assembly1
    rna:S7:1~76 1070,1292,1708~1709,1872~1874,
    1934
    rna:AA:10~3786 635~636,1041~1042,1941~1943,19
    52~1953,2038~2039,2048~2050,20
    72
    rna:mR:15~23 973,1251,1934~1935,2048,2053,2
    060
    rna:S9:1~76 572~573,584,1375,2047~2048
    14264 9buu:AA
    (2.8Å)
    		 3193 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02543 Plasmodium
    falciparum
    3D7
    36329    		 40825879 Assembly1
    rna:S7:1~76 2503~2505,2527~2529,2942,3103~
    3104,3152~3153
    rna:AC:2~157 10~24,59,152,338~345,347~350,3
    53~354,357,359,376~377,408,414
    ~429,706~707,734~735,772,1542~
    1543,1546,1567~1568,1590,1640,
    1679,1727~1728,2092~2093,2098~
    2099,2679,3568~3570
    rna:AB:2~119 1118~1120,1175,1177~1179,1284,
    1299,1325
    rna:SA:1~2090 965~967,2548~2552,2555~2556,25
    83~2585,2595~2597
    14265 9buu:AB
    (2.8Å)
    		 118 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00001 Plasmodium
    falciparum
    3D7
    36329    		 40825879 Assembly1
    rna:AA:10~3786 77~80,84,98,100~101
    14266 9buu:AC
    (2.8Å)
    		 151 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00002 Plasmodium
    falciparum
    3D7
    36329    		 40825879 Assembly1
    rna:AA:10~3786 2~5,7~26,28~41,44~45,107,109,1
    11~114,116~117,120,123,138,140
    ,143~144,146~156
    14267 9buu:S7
    (2.8Å)
    		 76 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Plasmodium
    falciparum
    3D7
    36329    		 40825879 Assembly1
    rna:AA:10~3786 3,70~73,75~76
    rna:SA:1~2090 30~31,34,38,40~41
    14268 9buu:SA
    (2.8Å)
    		 1608 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00006B7111 RF01960 Plasmodium
    falciparum
    3D7
    36329    		 40825879 Assembly1
    rna:S7:1~76 1070,1292,1708~1709,1873,1934
    rna:AA:10~3786 635~636,1041~1042,1941~1943,19
    52~1953,2038~2039,2048~2050,20
    72
    14269 9bxe:A

    		 11 N/A N/A N/A synthetic
    construct
    32630    		 41261770 Assembly1
    rna:B:12~22 1~11
    14270 9bxe:B

    		 11 N/A N/A N/A synthetic
    construct
    32630    		 41261770 Assembly1
    rna:A:1~11 12~22
    14271 9bz1:A
    (2.8Å)
    		 84 GO:0006730 (P) one-carbon metabolic pr...
    GO:1900371 (P) regulation of purine nu...    		 URS0002F12C62 RF01750 Clostridium
    beijerinckii
    1520    		 N/A Assembly1
    rna:B:1~89 8~11,39~41
    14272 9bz1:B
    (2.8Å)
    		 84 GO:0006730 (P) one-carbon metabolic pr...
    GO:1900371 (P) regulation of purine nu...    		 URS0002F12C62 RF01750 Clostridium
    beijerinckii
    1520    		 N/A Assembly1
    rna:A:1~89 23~25,30~32
    14273 9c3h:L1
    (2.0Å)
    		 148 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000005270 RF00002 Homo
    sapiens
    9606    		 39571015
    1227

    592

    993

    1215

    1271

    s37

    1238

    1178

    M085_0.6

    1389

    1360

    1352

    589

    706    		 Assembly1
    rna:L5:1~5069 3~22,24~37,40,53~54,68,103,108
    ,110~113,128,136,138~149,151~1
    56
    14274 9c3h:L5
    (2.0Å)
    		 3531 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0002F12C63 RF02543 Homo
    sapiens
    9606    		 39571015
    M054_0.6

    1306

    769

    1303

    762

    872

    1148

    1149

    764

    870

    167

    21

    930

    1029

    1075

    1072

    1073

    s77

    1071

    819

    1373

    938

    546

    s52

    s50

    931

    813

    936

    s59

    995

    994

    1083

    1314

    991

    1312

    1311

    1028

    1150

    123

    124

    125

    1068

    1017

    1060

    s100

    s102

    52

    533

    M227_0.6

    1384

    821

    926

    822

    1128

    988

    1321

    595

    705

    1328

    707

    1124

    987

    703

    M290_0.6

    503

    83

    1181

    797

    796

    795

    836

    837

    791

    790

    838

    1331

    1334

    s70

    1016

    s72

    1393

    1272

    1012

    1013

    1236

    1237

    763

    1231

    1232

    1233

    1335

    1238

    M109_0.6

    1336

    s17

    1239

    1333

    589

    776

    s96

    s99

    M273_0.6

    1389

    902

    900

    901

    906

    905

    33

    375

    970

    924

    M044_0.6

    1245

    s62

    s61

    1227

    1164

    M035_0.6

    1223

    604

    M320_0.6

    1347

    60

    s81

    M349_0.6

    708

    175

    1026

    977

    976

    974

    852

    853

    M154_0.6

    884

    s55

    979

    M153_0.6

    183

    185

    1375

    815

    1036

    706

    1034

    1035

    1212

    M102_0.6

    1216

    M083_0.6

    986

    467

    M148_0.6

    1354

    M103_0.6

    169

    91

    1127

    M070_0.6

    M272_0.6

    M020_0.6

    M050_0.6

    1187

    1182

    1183

    1037

    727

    M347_0.6

    722

    935

    M086_0.6

    883

    1165

    1166

    606

    886

    156

    748

    749

    608

    M061_0.6

    s48

    1055

    878

    879

    1059

    953

    952

    42

    954

    957

    1107

    1352

    774

    1215

    M104_0.6

    1173

    770

    773

    958

    1271

    610

    1273

    779

    778

    1178

    M151_0.6

    78

    1285

    1042

    1041

    1040

    1043

    1045

    1044

    1288

    354

    1360

    684

    800    		 Assembly1
    rna:L1:1~156 1~22,58,146,193,339,341~348,35
    0~353,355~357,360,362,379~380,
    415~430,1304~1305,1333~1334,13
    71,2308~2309,2312~2313,2332~23
    34,2355,2444~2445,2508~2509,25
    43,2778~2780,3890
    rna:L9:1~120 1736~1739,1741,1792~1796,1894,
    1909,1936,1942
    rna:S4:1~76 3754~3756,3769~3771,4196~4198,
    4200,4396~4397,4547~4548
    rna:S2:1~1869 1563~1565,2867,2884~2885,3629,
    3695,3700,3711,3759~3764,3766~
    3767,3794~3796,3806~3808
    14275 9c3h:L9
    (2.0Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00000F9D45 RF00001 Homo
    sapiens
    9606    		 39571015
    931

    1290

    s51

    879    		 Assembly1
    rna:L5:1~5069 77~80,84,88,98,100~104
    14276 9c3h:S2
    (2.0Å)
    		 1660 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00027E5AFD RF01960 Homo
    sapiens
    9606    		 39571015
    1263

    872

    1149

    1267

    764

    43

    692

    1079

    1072

    1073

    819

    346

    546

    1378

    930

    936

    935

    M296_0.6

    M141_0.6

    1068

    1017

    M147_0.6

    1060

    s102

    1386

    M016_0.6

    821

    926

    822

    1128

    1323

    988

    595

    1327

    986

    796

    836

    762

    790

    838

    1124

    s72

    1392

    1390

    1236

    1335

    1334

    M109_0.6

    1238

    M273_0.6

    s14

    s96

    s99

    1311

    902

    900

    s48

    1333

    924

    s62

    s61

    M074_0.6

    335

    1167

    977

    976

    974

    970

    1037

    1035

    1213

    756

    639

    M148_0.6

    786

    1355

    M065_0.6

    167

    M070_0.6

    813

    M050_0.6

    1188

    1187

    1029

    815

    727

    722

    883

    604

    606

    884

    749

    779

    608

    M037_0.6

    1055

    878

    1059

    952

    1195

    954

    870

    1380

    325

    770

    610

    1274

    1042

    M127_0.6

    804    		 Assembly1
    rna:L5:1~5069 368,677~678,970,1028~1030,1052
    ,1180,1708~1710,1719~1721,1731
    ,1815~1816,1824~1828,1849
    rna:S4:1~76 1058,1248,1524~1525,1639~1641,
    1701
    rna:S5:34~42 961,1056~1057,1207,1701~1702,1
    825,1830,1837~1838
    14277 9c3h:S4
    (2.0Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS0002F12C5F RF00005 Homo
    sapiens
    9606    		 39571015 Assembly1
    rna:L5:1~5069 2~3,12~13,24~25,74~76
    rna:S2:1~1869 30~32,34,38,40~41
    rna:S5:34~42 34~37
    14278 9c4g:a
    (2.53Å)
    		 2903 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000268139D RF02541 Cutibacterium
    acnes
    1747    		 39122144 Assembly1
    rna:b:1~120 946~948,999~1003,1041,1111
    14279 9c4g:b
    (2.53Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000F006E4 RF00001 Cutibacterium
    acnes
    1747    		 39122144 Assembly1
    rna:a:2~3080 78~81,88,90,97~98,100~101
    14280 9c8k:1
    (3.1Å)
    		 1708 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00005A14E2 RF01960 Oryctolagus
    cuniculus
    9986    		 39893634 Assembly1
    rna:2:1~53 1112~1113,1115~1121
    14281 9c8k:2
    (3.1Å)
    		 27 N/A URS0003054909 N/A Rabbit
    hemorrhagic
    disease
    virus
    11976    		 39893634 Assembly1
    rna:1:1~1869 5~12,49
    14282 9cai:A5
    (2.59Å)
    		 3022 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00029EB32B RF02543 Caenorhabditis
    elegans
    6239    		 39209556
    392

    145    		 Assembly1
    rna:DA:1~76 2354,2368~2369,2731~2732,2735,
    2931~2932,3082~3083
    rna:A7:1~119 1050~1053,1108~1109,1208,1223,
    1249,1255
    rna:A8:2~153 1~22,58,144,183,186,335~343,34
    5~348,351~352,355,357,374~375,
    404,410~425,657,685~686,721,14
    58~1459,1484,1506,1595~1596,16
    60~1661,1693~1696,2489,2697,31
    07
    rna:B2:2~1754 901~902,2028~2029,2228~2229,22
    94,2298,2308~2310,2358~2362,23
    65~2366,2393~2395,2405~2406
    14283 9cai:A7
    (2.59Å)
    		 119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000170579 RF00001 Caenorhabditis
    elegans
    6239    		 39209556 Assembly1
    rna:A5:1~3510 77~79,84,88,98,100~102
    14284 9cai:A8
    (2.59Å)
    		 146 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001218EE RF00002 Caenorhabditis
    elegans
    6239    		 39209556 Assembly1
    rna:A5:1~3510 2~22,24~33,35~37,40,53~54,68,1
    02,107,110~111,121~122,124~125
    ,132~133,135~153
    14285 9cai:B2
    (2.59Å)
    		 1476 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00005A42AA RF01960 Caenorhabditis
    elegans
    6239    		 39209556
    26

    145

    111

    448

    M017_0.6    		 Assembly1
    rna:DA:1~76 966,1150,1418~1419,1531~1533,1
    593
    rna:A5:1~3510 604~605,878,936~937,959~960,10
    82,1600~1602,1611~1613,1623~16
    24,1700~1701,1711~1713,1734
    rna:DC:1~10 869,1109,1593~1594,1710,1715
    14286 9cai:DA
    (2.59Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00029EB34B RF00005 Caenorhabditis
    elegans
    6239    		 39209556 Assembly1
    rna:B2:2~1754 30~32,34,38~41
    rna:A5:1~3510 2~3,12,24~25,74~76
    rna:DC:1~10 34~37
    14287 9cai:DC
    (2.59Å)
    		 10 N/A N/A N/A Caenorhabditis
    elegans
    6239    		 39209556 Assembly1
    rna:DA:1~76 4~6
    rna:B2:2~1754 1,3~7
    14288 9cg5:A
    (2.59Å)
    		 1519 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00000ABFE9 RF00177 Escherichia
    coli
    562    		 39222680 Assembly1
    rna:X:13~21 693,926,1400~1403,1493,1498
    rna:Z:2~76 790,966,1229~1230,1338~1340,14
    00
    rna:a:1~2903 702,784,899,1407~1409,1418,142
    9,1473~1475,1483~1484,1492~149
    6,1517
    14289 9cg5:Z
    (2.59Å)
    		 75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00029EB308 RF00005 Escherichia
    coli
    562    		 39222680 Assembly1
    rna:A:2~1534 30~32,34,38~41
    rna:X:13~21 34~37
    rna:a:1~2903 11~13,24~25,74~76
    14290 9cg5:a
    (2.59Å)
    		 2753 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B0F34 RF02541 Escherichia
    coli
    562    		 39222680 Assembly1
    rna:A:2~1534 1700~1704,1832,1836~1837,1846,
    1848,1895,1912~1916,1919~1920,
    1947~1948,1959~1961
    rna:Z:2~76 1907~1909,1922~1923,2063~2064,
    2251~2253,2255,2450~2451,2602
    rna:b:1~119 861~863,915,917~919,958,2340
    14291 9cg5:b
    (2.59Å)
    		 119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000049E57 RF00001 Escherichia
    coli
    562    		 39222680 Assembly1
    rna:a:1~2903 41,78~81,89,97,99~100
    14292 9cg6:A
    (2.61Å)
    		 1519 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00000ABFE9 RF00177 Escherichia
    coli
    562    		 39222680 Assembly1
    rna:X:13~21 693,926,1400~1403,1493,1498
    rna:Z:2~76 790,966,1229~1230,1338~1340,14
    00
    rna:a:1~2903 702,784,899,1407~1409,1418,142
    9,1474~1475,1483~1484,1492~149
    6,1517
    14293 9cg6:Z
    (2.61Å)
    		 75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00029EB308 RF00005 Escherichia
    coli
    562    		 39222680 Assembly1
    rna:A:2~1534 30~32,34,38,40~41
    rna:X:13~21 34~37
    rna:a:1~2903 11~12,24~25,74~76
    14294 9cg6:a
    (2.61Å)
    		 2753 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B0F34 RF02541 Escherichia
    coli
    562    		 39222680 Assembly1
    rna:A:2~1534 1689,1700~1704,1832,1836~1837,
    1846,1848,1895,1912~1916,1919~
    1920,1947~1948,1959~1961
    rna:Z:2~76 1907~1909,1922~1923,2064,2251~
    2253,2450~2451
    rna:b:1~119 861~864,915,917~919,958,2340
    14295 9cg6:b
    (2.61Å)
    		 119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000049E57 RF00001 Escherichia
    coli
    562    		 39222680 Assembly1
    rna:a:1~2903 41,78~81,89~90,96~97,99~100
    14296 9cg7:A
    (2.75Å)
    		 1519 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00000ABFE9 RF00177 Escherichia
    coli
    562    		 39222680 Assembly1
    rna:X:13~21 693,926,1400~1403,1493,1498
    rna:Z:2~76 790,966,1229~1230,1338~1340,14
    00
    rna:a:1~2903 702,784,899,1407~1409,1418,142
    9,1474~1475,1483~1484,1492~149
    6,1517
    14297 9cg7:Z
    (2.75Å)
    		 75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00029EB308 RF00005 Escherichia
    coli
    562    		 39222680 Assembly1
    rna:A:2~1534 30~32,34,38,40~41
    rna:X:13~21 34~37
    rna:a:1~2903 11~12,24~25,74~76
    14298 9cg7:a
    (2.75Å)
    		 2753 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B0F34 RF02541 Escherichia
    coli
    562    		 39222680 Assembly1
    rna:A:2~1534 1700~1703,1832,1837,1846,1848,
    1895,1912~1916,1919~1920,1947~
    1948,1959~1961
    rna:Z:2~76 1907~1909,1922~1923,2063~2064,
    2251~2253,2450~2451,2585,2602
    rna:b:1~119 861~863,915,917~919,958,2340
    14299 9cg7:b
    (2.75Å)
    		 119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000049E57 RF00001 Escherichia
    coli
    562    		 39222680 Assembly1
    rna:a:1~2903 41,78~81,89,97,99~100
    14300 9cgv:P
    (2.7Å)
    		 15 N/A URS000261779E N/A synthetic
    construct
    32630    		 40049411 Assembly1
    rna:T:100~116 21~35
    << < 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 > >>
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    Reference:
  • Chengxin Zhang, Lydia Freddolino (2024) "FURNA: a database for function annotations of RNA structures," PLOS Biology 22(7): e3002476.