SEQ2FUN

FURNA
Download all results in tab-seperated text for 16611 RNAs.
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  • Hover over Ligand to view the name of the ligand and the ligand-binding nucleotides on the RNA.

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    # PDB
    (Resolution)    		 Length EC number
    & GO term     		RNAcentral Rfam Taxon PubMed ATtRACT
    motif     		Ligand &
    binding nucleotides
    14401 9d7s:2v
    (2.85Å)
    		 13 N/A N/A N/A Escherichia
    phage
    T4
    2681598    		 39415050
    39415050    		 Assembly2
    rna:2a:4~1532 10,12~13,15~21
    rna:2x:1~76 15~18
    14402 9d7s:2x
    (2.85Å)
    		 75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    562    		 39415050
    39415050    		 Assembly2
    rna:2A:6~2897 2~3,11~13,24~25,74~76
    rna:2a:4~1532 29~32,34,38~39,41
    rna:2v:10~22 34~37
    rna:2y:1~76 39~40
    14403 9d7s:2y
    (2.85Å)
    		 74 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    562    		 39415050
    39415050    		 Assembly2
    rna:2A:6~2897 19,56,71~72,76
    rna:2x:1~76 35~36
    14404 9d7t:1A
    (2.7Å)
    		 2871 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001698E8 RF02541 Thermus
    thermophilus
    HB8
    300852    		 39415050
    39415050    		 Assembly1
    rna:1B:1~120 861~864,916~919,958
    rna:1a:4~1533 1689,1700~1704,1832,1836~1837,
    1846,1848,1912~1916,1919~1920,
    1947~1948,1959~1961,2863~2864
    rna:1x:1~76 1907~1909,1922~1924,2251~2253,
    2255,2439,2450~2451,2601~2602
    rna:1y:1~76 1851~1852,2112,2394~2395,2421~
    2422
    14405 9d7t:1B
    (2.7Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DEE8 RF00001 Thermus
    thermophilus
    HB8
    300852    		 39415050
    39415050    		 Assembly1
    rna:1A:6~2897 78~81,90,97~98,100~101
    14406 9d7t:1a
    (2.7Å)
    		 1500 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DFED RF00177 Thermus
    thermophilus
    HB8
    300852    		 39415050
    39415050    		 Assembly1
    rna:1A:6~2897 702,783~784,899,1407~1409,1418
    ,1429,1442A,1473~1475,1483~148
    5,1493~1496,1517
    rna:1v:10~22 530,926,1400~1401,1492~1493,14
    98,1503~1505,1507
    rna:1x:1~76 790,966,1229~1230,1338~1341,14
    00
    14407 9d7t:1v
    (2.7Å)
    		 13 N/A N/A N/A Escherichia
    phage
    T4
    2681598    		 39415050
    39415050    		 Assembly1
    rna:1a:4~1533 12~13,15~21
    rna:1x:1~76 16~18
    14408 9d7t:1x
    (2.7Å)
    		 75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    562    		 39415050
    39415050    		 Assembly1
    rna:1A:6~2897 2~3,11~13,24~25,74~76
    rna:1a:4~1533 30~32,34,38,40~41
    rna:1v:10~22 34~37
    rna:1y:1~76 39~40
    14409 9d7t:1y
    (2.7Å)
    		 74 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    562    		 39415050
    39415050    		 Assembly1
    rna:1A:6~2897 19,71~72,76
    rna:1x:1~76 35~36
    14410 9d7t:2A
    (2.7Å)
    		 2800 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001698E8 RF02541 Thermus
    thermophilus
    HB8
    300852    		 39415050
    39415050    		 Assembly2
    rna:2B:1~120 861~864,915,917~918
    rna:2a:4~1532 1689,1700~1704,1832,1836~1837,
    1846,1848,1912~1913,1915~1916,
    1919~1920,1947~1948,1959~1961,
    2863~2864
    rna:2x:1~76 1907~1909,1922~1924,2251~2253,
    2255,2439,2450~2451,2602
    rna:2y:1~76 1851~1852,2112,2169,2394~2395,
    2421~2422
    14411 9d7t:2B
    (2.7Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DEE8 RF00001 Thermus
    thermophilus
    HB8
    300852    		 39415050
    39415050    		 Assembly2
    rna:2A:6~2897 78~80,97~102
    14412 9d7t:2a
    (2.7Å)
    		 1503 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DFED RF00177 Thermus
    thermophilus
    HB8
    300852    		 39415050
    39415050    		 Assembly2
    rna:2A:6~2897 702,783~784,899,1407~1409,1418
    ,1429,1442A,1473~1475,1483~148
    4,1493~1496,1517
    rna:2v:10~22 530,926~927,1400~1402,1492~149
    3,1498,1503~1505,1507,1532
    rna:2x:1~76 790,966,1229~1230,1338~1340,14
    00
    14413 9d7t:2v
    (2.7Å)
    		 13 N/A N/A N/A Escherichia
    phage
    T4
    2681598    		 39415050
    39415050    		 Assembly2
    rna:2a:4~1532 10,12~13,15~21
    rna:2x:1~76 16~18
    14414 9d7t:2x
    (2.7Å)
    		 75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    562    		 39415050
    39415050    		 Assembly2
    rna:2A:6~2897 2~3,12~13,24~25,74~76
    rna:2a:4~1532 30~32,34,38~41
    rna:2v:10~22 34~37
    14415 9d7t:2y
    (2.7Å)
    		 74 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    562    		 39415050
    39415050    		 Assembly2
    rna:2A:6~2897 19,56,71~72,76
    14416 9d89:D
    (1.95Å)
    		 2728 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0003054956 RF02541 Escherichia
    coli
    562    		 39414793 Assembly1
    rna:E:1~119 863~866,917,919~921,960,2343
    14417 9d89:E
    (1.95Å)
    		 119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E133 RF00001 Escherichia
    coli
    562    		 39414793 Assembly1
    rna:D:1~2907 41,78~81,89~90,96~97,99~100
    14418 9dfc:1A
    (2.5Å)
    		 2871 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001698E8 RF02541 Thermus
    thermophilus
    HB8
    300852    		 39372947 Assembly1
    rna:1B:1~120 861~864,915,917~919,958
    rna:1a:4~1533 1689,1700~1704,1832,1836~1837,
    1846,1848,1912~1916,1919~1920,
    1947~1949,1959~1961,2864
    rna:1w:1~76 897,1913,2451~2452,2482~2483,2
    506~2507,2553~2555,2573,2583~2
    585,2602
    rna:1x:1~76 1907~1909,1922~1924,2062~2063,
    2251~2252,2439,2450~2451,2601~
    2602
    rna:1y:1~76 1851,1885,2112,2169,2394~2395,
    2421~2422
    14419 9dfc:1B
    (2.5Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DEE8 RF00001 Thermus
    thermophilus
    HB8
    300852    		 39372947 Assembly1
    rna:1A:6~2897 78~81,90,97~98,100~102
    14420 9dfc:1a
    (2.5Å)
    		 1500 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DFED RF00177 Thermus
    thermophilus
    HB8
    300852    		 39372947 Assembly1
    rna:1A:6~2897 702,783~784,899,1407~1409,1418
    ,1429,1442A,1473~1475,1483~148
    4,1494~1496,1517
    rna:1v:12~24 530,926,1196,1397,1400~1401,14
    92~1493,1498,1503,1505,1507
    rna:1w:1~76 530~531,1054,1493
    rna:1x:1~76 790,966,1229~1230,1338~1340,14
    00
    14421 9dfc:1v
    (2.5Å)
    		 13 N/A N/A N/A Tequatrovirus
    T4
    10665    		 39372947 Assembly1
    rna:1a:4~1533 12~13,15~24
    rna:1w:1~76 19~21
    rna:1x:1~76 16~18
    14422 9dfc:1w
    (2.5Å)
    		 75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    562    		 39372947 Assembly1
    rna:1A:6~2897 37~38,56,64,74~76
    rna:1a:4~1533 34~37
    rna:1v:12~24 34~37
    14423 9dfc:1x
    (2.5Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    562    		 39372947 Assembly1
    rna:1A:6~2897 11~13,24~25,74~76
    rna:1a:4~1533 30~32,34,38~41
    rna:1v:12~24 34~37
    14424 9dfc:1y
    (2.5Å)
    		 74 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    562    		 39372947 Assembly1
    rna:1A:6~2897 19,56,71,76
    14425 9dfc:2A
    (2.5Å)
    		 2800 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001698E8 RF02541 Thermus
    thermophilus
    HB8
    300852    		 39372947 Assembly2
    rna:2B:1~120 861~864,915,917~919,958
    rna:2a:4~1532 1689,1700~1704,1832,1836~1837,
    1846,1848,1912~1916,1919~1920,
    1947~1949,1959~1961,2863~2864
    rna:2w:2~76 897,1913,2451~2452,2482~2483,2
    506~2507,2553~2555,2583~2585,2
    602
    rna:2x:1~76 1907~1909,1922~1924,2062~2063,
    2251~2252,2439,2450~2451,2601~
    2602
    rna:2y:1~76 1851,2112,2169,2394~2395,2421~
    2422,2432
    14426 9dfc:2B
    (2.5Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DEE8 RF00001 Thermus
    thermophilus
    HB8
    300852    		 39372947 Assembly2
    rna:2A:6~2897 78~81,90,97~98,100~102
    14427 9dfc:2a
    (2.5Å)
    		 1503 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DFED RF00177 Thermus
    thermophilus
    HB8
    300852    		 39372947 Assembly2
    rna:2A:6~2897 702,783~784,899,1407~1409,1418
    ,1429~1430,1442A,1473~1475,148
    3~1484,1494~1496,1517
    rna:2v:12~24 926,1196,1397,1400~1402,1492~1
    493,1498,1503,1505,1507
    rna:2w:2~76 530~531,1054,1493
    rna:2x:1~76 790,966,1229~1230,1338~1340,14
    00
    14428 9dfc:2v
    (2.5Å)
    		 13 N/A N/A N/A Tequatrovirus
    T4
    10665    		 39372947 Assembly2
    rna:2a:4~1532 12~13,15~20,22~24
    rna:2w:2~76 19~21
    rna:2x:1~76 16~18
    14429 9dfc:2w
    (2.5Å)
    		 72 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    562    		 39372947 Assembly2
    rna:2A:6~2897 37~38,56,64,74~76
    rna:2a:4~1532 34~37
    rna:2v:12~24 34~37
    14430 9dfc:2x
    (2.5Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    562    		 39372947 Assembly2
    rna:2A:6~2897 11~13,24~25,74~76
    rna:2a:4~1532 30~32,34,38~41
    rna:2v:12~24 34~37
    14431 9dfc:2y
    (2.5Å)
    		 73 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    562    		 39372947 Assembly2
    rna:2A:6~2897 19,56,71~72,76
    rna:2x:1~76 35~36
    14432 9dfd:1A
    (2.6Å)
    		 2871 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001698E8 RF02541 Thermus
    thermophilus
    HB8
    300852    		 39372947 Assembly1
    rna:1B:1~120 861~863,915,917~919,958
    rna:1a:4~1533 1689,1700~1704,1832,1836~1837,
    1846,1848,1912~1916,1919~1920,
    1947~1949,1959~1961,2864
    rna:1w:1~76 882,897,1913,2451~2452,2482~24
    83,2506~2507,2553~2555,2573,25
    83~2585,2602
    rna:1x:1~76 1907~1909,1922~1924,2062~2063,
    2251~2253,2439,2450~2451,2585,
    2601~2602
    rna:1y:1~76 1885,2112,2169,2394~2395,2421~
    2422
    14433 9dfd:1B
    (2.6Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DEE8 RF00001 Thermus
    thermophilus
    HB8
    300852    		 39372947 Assembly1
    rna:1A:6~2897 78~81,90,97~98,100~101
    14434 9dfd:1a
    (2.6Å)
    		 1500 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DFED RF00177 Thermus
    thermophilus
    HB8
    300852    		 39372947 Assembly1
    rna:1A:6~2897 702,783~784,899~900,1407~1409,
    1418,1429,1442A,1473~1475,1483
    ~1484,1494~1496,1517
    rna:1v:12~24 530,926,1196,1397,1400~1401,14
    92~1493,1498,1503,1505,1507
    rna:1w:1~76 530,1054,1493
    rna:1x:1~76 790,966,1229~1230,1338~1341,14
    00
    14435 9dfd:1v
    (2.6Å)
    		 13 N/A N/A N/A Tequatrovirus
    T4
    10665    		 39372947 Assembly1
    rna:1a:4~1533 12~13,15~24
    rna:1w:1~76 19~21
    rna:1x:1~76 16~18
    14436 9dfd:1w
    (2.6Å)
    		 75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    562    		 39372947 Assembly1
    rna:1A:6~2897 19,37~38,56,64,74~76
    rna:1a:4~1533 34~37
    rna:1v:12~24 34~37
    14437 9dfd:1x
    (2.6Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    562    		 39372947 Assembly1
    rna:1A:6~2897 11~13,24~25,74~76
    rna:1a:4~1533 29~32,34,38~41
    rna:1v:12~24 34~37
    14438 9dfd:1y
    (2.6Å)
    		 74 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    562    		 39372947 Assembly1
    rna:1A:6~2897 19,56,76
    rna:1x:1~76 35~36
    14439 9dfd:2A
    (2.6Å)
    		 2800 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001698E8 RF02541 Thermus
    thermophilus
    HB8
    300852    		 39372947 Assembly2
    rna:2B:1~120 861~864,915,917~919,958
    rna:2a:4~1532 1689,1700~1704,1832,1836~1837,
    1846,1848,1912~1916,1919~1920,
    1947~1949,1959~1961,2864
    rna:2w:2~76 897,1913,2451~2452,2482,2506~2
    507,2553~2555,2573,2583~2585,2
    602
    rna:2x:1~76 1907~1909,1922~1924,2062~2063,
    2251~2253,2439,2450~2451,2585,
    2601~2602
    rna:2y:1~76 1851,1885,2112,2169,2394~2395,
    2421~2422
    14440 9dfd:2B
    (2.6Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DEE8 RF00001 Thermus
    thermophilus
    HB8
    300852    		 39372947 Assembly2
    rna:2A:6~2897 78~81,90,97~98,100~102
    14441 9dfd:2a
    (2.6Å)
    		 1503 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DFED RF00177 Thermus
    thermophilus
    HB8
    300852    		 39372947 Assembly2
    rna:2A:6~2897 702,783~784,899,1407~1409,1418
    ,1429~1430,1442A,1473~1475,148
    3~1484,1494~1496,1517
    rna:2v:12~24 926,1196,1397,1400~1402,1492~1
    493,1498,1503,1505,1507
    rna:2w:2~76 530~531,1054,1493
    rna:2x:1~76 790,966,1229~1230,1338~1340,14
    00
    rna:2y:1~76 693~694
    14442 9dfd:2v
    (2.6Å)
    		 13 N/A N/A N/A Tequatrovirus
    T4
    10665    		 39372947 Assembly2
    rna:2a:4~1532 13,15~20,22~24
    rna:2w:2~76 19~21
    rna:2x:1~76 16~18
    14443 9dfd:2w
    (2.6Å)
    		 72 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    562    		 39372947 Assembly2
    rna:2A:6~2897 37~38,56,64,74~76
    rna:2a:4~1532 34~37
    rna:2v:12~24 34~37
    14444 9dfd:2x
    (2.6Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    562    		 39372947 Assembly2
    rna:2A:6~2897 11~13,24~25,74~76
    rna:2a:4~1532 30~32,34,38~41
    rna:2v:12~24 34~37
    14445 9dfd:2y
    (2.6Å)
    		 73 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    562    		 39372947 Assembly2
    rna:2A:6~2897 3,19,56,71~72,76
    rna:2a:4~1532 37~38
    rna:2x:1~76 35~36
    14446 9dfe:1A
    (2.6Å)
    		 2872 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001698E8 RF02541 Thermus
    thermophilus
    HB8
    300852    		 39372947 Assembly1
    rna:1B:1~120 861~864,915,917~919,958
    rna:1a:4~1533 1689,1700~1704,1832,1836~1837,
    1846,1848,1895,1912~1916,1919~
    1920,1947~1949,1959~1961,2863~
    2864
    14447 9dfe:1B
    (2.6Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DEE8 RF00001 Thermus
    thermophilus
    HB8
    300852    		 39372947 Assembly1
    rna:1A:6~2897 78~81,90,97~98,100~102
    14448 9dfe:1a
    (2.6Å)
    		 1500 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DFED RF00177 Thermus
    thermophilus
    HB8
    300852    		 39372947 Assembly1
    rna:1A:6~2897 702,783~784,899~900,1407~1409,
    1418,1429~1430,1442A,1473~1475
    ,1483~1484,1492~1496,1517
    14449 9dfe:2A
    (2.6Å)
    		 2867 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001698E8 RF02541 Thermus
    thermophilus
    HB8
    300852    		 39372947 Assembly2
    rna:2B:1~120 861~864,915~919,958
    rna:2a:4~1533 1689,1700~1704,1832,1836~1837,
    1846,1848,1895,1912~1916,1919~
    1920,1947~1950,1959~1961,2863~
    2864
    14450 9dfe:2B
    (2.6Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DEE8 RF00001 Thermus
    thermophilus
    HB8
    300852    		 39372947 Assembly2
    rna:2A:6~2897 78~81,90,97~98,100~102
    14451 9dfe:2a
    (2.6Å)
    		 1504 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DFED RF00177 Thermus
    thermophilus
    HB8
    300852    		 39372947 Assembly2
    rna:2A:6~2897 702,783~784,899~900,1407~1409,
    1418~1420,1429~1430,1442A,1473
    ~1475,1483~1484,1491~1496,1517
    14452 9dhx:B
    (3.1Å)
    		 20 N/A URS000036142B N/A Homo
    sapiens
    9606    		 N/A
    M175_0.6    		 Assembly1
    rna:C:2~22 2~20
    14453 9dhx:C
    (3.1Å)
    		 21 N/A N/A N/A synthetic
    construct
    32630    		 N/A Assembly1
    rna:B:1~20 2~20
    14454 9dib:A
    (2.68Å)
    		 96 N/A N/A N/A Rous
    sarcoma
    virus
    -
    Prague
    C
    11888    		 40172966 Assembly1
    rna:B:1~111 1,21,86~87,99,111
    14455 9dib:B
    (2.68Å)
    		 104 N/A N/A N/A Rous
    sarcoma
    virus
    -
    Prague
    C
    11888    		 40172966 Assembly1
    rna:A:1~111 1,21,86~87,99,111
    14456 9did:A
    (2.8Å)
    		 96 N/A N/A N/A Rous
    sarcoma
    virus
    -
    Prague
    C
    11888    		 40172966 Assembly1
    rna:B:1~111 1,21~22,86~87,99,111
    14457 9did:B
    (2.8Å)
    		 102 N/A N/A N/A Rous
    sarcoma
    virus
    -
    Prague
    C
    11888    		 40172966 Assembly1
    rna:A:1~111 1,21,86~87,99,111
    14458 9dig:A
    (3.22Å)
    		 96 N/A N/A N/A Rous
    sarcoma
    virus
    -
    Prague
    C
    11888    		 40172966 Assembly1
    rna:B:1~111 1,21,86~90,92~94,96~99,111
    14459 9dig:B
    (3.22Å)
    		 96 N/A N/A N/A Rous
    sarcoma
    virus
    -
    Prague
    C
    11888    		 40172966 Assembly1
    rna:A:1~111 1,21,86~90,92~94,96~99,111
    14460 9dii:A
    (4.0Å)
    		 92 N/A N/A N/A Rous
    sarcoma
    virus
    -
    Prague
    C
    11888    		 40172966 Assembly1
    rna:B:1~111 1,21,86~91,96~99,111
    14461 9dii:B
    (4.0Å)
    		 92 N/A N/A N/A Rous
    sarcoma
    virus
    -
    Prague
    C
    11888    		 40172966 Assembly1
    rna:A:1~111 1,21,86~91,95~99,111
    14462 9dll:A

    		 13 N/A URS00029EB347 N/A Homo
    sapiens
    9606    		 N/A Assembly1
    rna:B:14 1~13
    14463 9dll:B

    		 13 N/A URS00029EB347 N/A Homo
    sapiens
    9606    		 N/A Assembly1
    rna:A:1~13 14~26
    14464 9dtr:2
    (2.31Å)
    		 132 GO:0045131 (F) pre-mRNA branch point b...
    GO:0000348 (P) mRNA branch site recogn...
    GO:0005686 (C) U2 snRNP    		 URS000023C730 RF00004 Saccharomyces
    cerevisiae
    4932    		 38746449 Assembly1
    rna:6:1~102 4~13,16~17,21~23,26~30
    rna:E:-14~21 27~28
    rna:I:1~95 33~48
    14465 9dtr:5
    (2.31Å)
    		 173 GO:0000244 (P) spliceosomal tri-snRNP ...
    GO:0000353 (P) formation of quadruple ...
    GO:0005682 (C) U5 snRNP
    GO:0046540 (C) U4/U6 x U5 tri-snRNP co...    		 URS000053F313 RF00020 Saccharomyces
    cerevisiae
    4932    		 38746449 Assembly1
    rna:6:1~102 98~99
    rna:E:-14~21 96~100
    14466 9dtr:6
    (2.31Å)
    		 102 GO:0030621 (F) U4 snRNA binding
    GO:0000244 (P) spliceosomal tri-snRNP ...
    GO:0000353 (P) formation of quadruple ...
    GO:0005688 (C) U6 snRNP
    GO:0046540 (C) U4/U6 x U5 tri-snRNP co...    		 URS00006184A9 RF00026 Saccharomyces
    cerevisiae
    4932    		 38746449
    383    		 Assembly1
    rna:2:4~1170 53,55~62,88~89,92~101
    rna:5:2~178 72~73,75
    rna:E:-14~21 59~60,77
    rna:I:1~95 45~51,58~59,79
    14467 9dtr:E
    (2.31Å)
    		 33 N/A N/A N/A Saccharomyces
    cerevisiae
    4932    		 38746449 Assembly1
    rna:5:2~178 -5~-1,1
    rna:6:1~102 -2~-1,1~2
    14468 9dtr:I
    (2.31Å)
    		 48 N/A URS0000B21DEE N/A Saccharomyces
    cerevisiae
    4932    		 38746449
    132

    387

    168

    403    		 Assembly1
    rna:2:4~1170 56~69,71~72
    rna:6:1~102 2~8,95
    14469 9e0n:A
    (3.24Å)
    		 3102 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000BC467B RF02541 Mycolicibacterium
    smegmatis
    1772    		 40626557 Assembly1
    rna:B:1~117 976~978,1030~1034
    rna:a:9~1518 1907,1919~1922,2063,2065,2136~
    2138,2143~2144,2171~2173,2183~
    2184
    14470 9e0n:B
    (3.24Å)
    		 117 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000047BBB1 RF00001 Mycolicibacterium
    smegmatis
    1772    		 40626557 Assembly1
    rna:A:2~3119 78~81,94,96~97
    14471 9e0n:a
    (3.24Å)
    		 1506 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00177 Mycolicibacterium
    smegmatis
    1772    		 40626557 Assembly1
    rna:A:2~3119 682,1390~1393,1401~1402,1412,1
    457~1459,1467~1468,1475,1477~1
    479,1501
    14472 9e0p:A
    (3.17Å)
    		 3102 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02541 Mycolicibacterium
    smegmatis
    1772    		 40626557 Assembly1
    rna:B:1~117 976~978,1030~1034
    rna:a:9~1518 1907,1918~1922,2053,2063~2065,
    2136~2137,2140,2143~2144,2146,
    2171~2174,2183~2184
    14473 9e0p:B
    (3.17Å)
    		 117 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000047BBB1 RF00001 Mycolicibacterium
    smegmatis
    1772    		 40626557 Assembly1
    rna:A:2~3119 78~81,94~97
    14474 9e0p:a
    (3.17Å)
    		 1506 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00177 Mycolicibacterium
    smegmatis
    1772    		 40626557 Assembly1
    rna:A:2~3119 682,763,771,1390~1392,1401~140
    3,1412,1457~1459,1467~1468,147
    7~1480,1501
    14475 9e6q:1
    (1.95Å)
    		 2842 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0002F10451 RF02540 Pyrobaculum
    calidifontis
    JCM
    11548
    410359    		 40676158 Assembly1
    rna:2:1~129 980~983,1034,1036~1037,1107,11
    22,1147,1153~1154
    14476 9e6q:2
    (1.95Å)
    		 129 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0002F1043C RF00001 Pyrobaculum
    calidifontis
    JCM
    11548
    410359    		 40676158 Assembly1
    rna:1:1~3024 84~86,91,95,104~109
    14477 9e71:1
    (2.36Å)
    		 2849 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0002F10451 RF02540 Pyrobaculum
    calidifontis
    JCM
    11548
    410359    		 40676158 Assembly1
    rna:2:1~129 980~983,1034,1036~1037,1107,11
    22,1147,1153~1154
    rna:4:1~1495 832~834,1847,2034,2039~2040,20
    68~2069,2080~2081
    14478 9e71:2
    (2.36Å)
    		 129 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0002F1043C RF00001 Pyrobaculum
    calidifontis
    JCM
    11548
    410359    		 40676158 Assembly1
    rna:1:1~3024 84~86,91,95,104~109
    14479 9e71:4
    (2.36Å)
    		 1430 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0002F1044D RF01959 Pyrobaculum
    calidifontis
    JCM
    11548
    410359    		 40676158 Assembly1
    rna:1:1~3024 543,722~724,1373~1374,1384,139
    5,1442~1443,1453~1455,1476
    14480 9e7f:1
    (2.53Å)
    		 2849 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0002F10451 RF02540 Pyrobaculum
    calidifontis
    JCM
    11548
    410359    		 40676158 Assembly1
    rna:2:1~129 980~983,1034,1036~1037,1107,11
    22,1147,1153~1154
    rna:4:1~1495 832~834,1847,2034,2039~2040,20
    68~2069,2080~2082
    14481 9e7f:2
    (2.53Å)
    		 129 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0002F1043C RF00001 Pyrobaculum
    calidifontis
    JCM
    11548
    410359    		 40676158 Assembly1
    rna:1:1~3024 84~86,91,95,105~109
    14482 9e7f:4
    (2.53Å)
    		 1430 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0002F1044D RF01959 Pyrobaculum
    calidifontis
    JCM
    11548
    410359    		 40676158 Assembly1
    rna:1:1~3024 543,721~723,1384,1395,1442~144
    4,1453~1455,1476
    14483 9e93:D
    (3.58Å)
    		 10 N/A URS0000D77946 N/A Escherichia
    coli
    BL21(DE3)
    469008    		 40593686 Assembly1
    rna:C:2~10 2~9
    14484 9e93:H
    (3.58Å)
    		 10 N/A URS0000D77946 N/A Escherichia
    coli
    BL21(DE3)
    469008    		 40593686 Assembly1
    rna:G:2~10 2~9
    14485 9e9v:H
    (4.0Å)
    		 10 N/A URS0000D77946 N/A Escherichia
    coli
    BL21(DE3)
    469008    		 40593686 Assembly1
    rna:G:2~10 2~9
    14486 9ec8:B
    (3.07Å)
    		 52 N/A N/A N/A [Eubacterium]
    siraeum
    DSM
    15702
    428128    		 39103341 Assembly1
    rna:C:5~27 31~40,42~52
    14487 9ec8:C
    (3.07Å)
    		 23 N/A N/A N/A [Eubacterium]
    siraeum
    DSM
    15702
    428128    		 39103341 Assembly1
    rna:B:1~52 5~15,17~27
    14488 9ec9:B
    (3.26Å)
    		 49 N/A N/A N/A [Eubacterium]
    siraeum
    DSM
    15702
    428128    		 N/A Assembly1
    rna:C:4~23 33~49
    14489 9ec9:C
    (3.26Å)
    		 20 N/A N/A N/A [Eubacterium]
    siraeum
    DSM
    15702
    428128    		 N/A Assembly1
    rna:B:1~49 8~23
    14490 9eca:B
    (3.19Å)
    		 49 N/A N/A N/A [Eubacterium]
    siraeum
    DSM
    15702
    428128    		 N/A Assembly1
    rna:C:6~23 33~49
    14491 9eca:C
    (3.19Å)
    		 18 N/A N/A N/A [Eubacterium]
    siraeum
    DSM
    15702
    428128    		 N/A Assembly1
    rna:B:1~49 9~19,21~23
    14492 9ecb:B
    (3.15Å)
    		 44 N/A N/A N/A [Eubacterium]
    siraeum
    DSM
    15702
    428128    		 N/A Assembly1
    rna:C:6~23 36~49
    14493 9ecb:C
    (3.15Å)
    		 18 N/A N/A N/A [Eubacterium]
    siraeum
    DSM
    15702
    428128    		 N/A Assembly1
    rna:B:1~49 10~15,17~21
    14494 9ecc:B
    (3.32Å)
    		 45 N/A N/A N/A [Eubacterium]
    siraeum
    DSM
    15702
    428128    		 N/A Assembly1
    rna:C:7~22 32~33,37~39,41~45
    14495 9ecc:C
    (3.32Å)
    		 16 N/A N/A N/A [Eubacterium]
    siraeum
    DSM
    15702
    428128    		 N/A Assembly1
    rna:B:1~45 10,12~13,15~22
    14496 9ecd:B
    (3.47Å)
    		 46 N/A N/A N/A [Eubacterium]
    siraeum
    DSM
    15702
    428128    		 N/A Assembly1
    rna:C:8~27 31~38,40~46
    14497 9ecd:C
    (3.47Å)
    		 20 N/A N/A N/A [Eubacterium]
    siraeum
    DSM
    15702
    428128    		 N/A Assembly1
    rna:B:1~46 11~27
    14498 9ece:B
    (3.01Å)
    		 50 N/A N/A N/A [Eubacterium]
    siraeum
    DSM
    15702
    428128    		 N/A Assembly1
    rna:C:6~23 35~37,39~41,43~50
    14499 9ece:C
    (3.01Å)
    		 18 N/A N/A N/A [Eubacterium]
    siraeum
    DSM
    15702
    428128    		 N/A Assembly1
    rna:B:1~50 7~18,20~22
    14500 9ere:T
    (2.82Å)
    		 52 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS0002F12C70 RF00005 Homo
    sapiens
    9606    		 39627193
    1177

    1226

    1344

    588

    1332    		 Assembly1
    rna:U:77~80 3~6,76
    << < 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 > >>
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    Reference:
  • Chengxin Zhang, Lydia Freddolino (2024) "FURNA: a database for function annotations of RNA structures," PLOS Biology 22(7): e3002476.