SEQ2FUN

FURNA
Download all results in tab-seperated text for 16611 RNAs.
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  • Hover over Ligand to view the name of the ligand and the ligand-binding nucleotides on the RNA.
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    # PDB
    (Resolution)
    Length EC number
    & GO term
    RNAcentral Rfam Taxon PubMed ATtRACT
    motif
    Ligand &
    binding nucleotides
    14801 9gmo:A
    (2.59Å)

    3394 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00029EB357 RF02543 Homo
    sapiens

    9606
    38746087
    M054_0.6

    1306

    769

    706

    1303

    762

    872

    1148

    1149

    764

    167

    21

    930

    1072

    1073

    1071

    819

    1373

    938

    1375

    s52

    s50

    931

    M272_0.6

    M347_0.6

    s59

    995

    994

    595

    1314

    991

    1312

    1311

    1150

    123

    124

    125

    1068

    1017

    1060

    s100

    s102

    52

    533

    M227_0.6

    1384

    375

    926

    822

    1128

    1323

    988

    1321

    1083

    705

    1328

    707

    1124

    987

    1126

    703

    M077_0.6

    1237

    1037

    83

    770

    797

    796

    795

    836

    837

    791

    790

    838

    1334

    s70

    1016

    s72

    1393

    610

    1012

    1013

    1236

    M290_0.6

    763

    1231

    1232

    1233

    1335

    s17

    M109_0.6

    1336

    1331

    1239

    1333

    589

    776

    s96

    s99

    M273_0.6

    1389

    902

    821

    900

    901

    906

    905

    33

    s48

    970

    M044_0.6

    1245

    s62

    1227

    883

    M035_0.6

    1223

    M156_0.6

    1165

    1042

    1347

    60

    s81

    M349_0.6

    708

    977

    976

    974

    852

    853

    M154_0.6

    884

    s55

    979

    M153_0.6

    183

    1238

    185

    546

    815

    1036

    503

    1034

    1035

    1212

    M102_0.6

    1216

    1215

    986

    467

    M148_0.6

    1354

    M103_0.6

    169

    91

    1127

    M070_0.6

    1026

    M020_0.6

    M050_0.6

    1187

    1182

    1183

    1181

    1107

    722

    935

    M086_0.6

    936

    1164

    604

    1166

    606

    886

    156

    748

    749

    608

    727

    M061_0.6

    958

    1055

    878

    879

    1059

    953

    952

    42

    954

    957

    1352

    774

    M104_0.6

    1173

    s77

    773

    1271

    1272

    1273

    779

    778

    1178

    78

    1285

    M083_0.6

    1041

    1040

    1043

    1045

    1044

    1288

    354

    1360

    684

    800
    Assembly1
    rna:B:2~119 1736~1738,1741,1794~1795,1894,
    1909,1936,1942~1943

    rna:C:1~156 1~22,58,146,339,341~348,350~35
    3,356~357,360,362,379~380,415~
    430,1305,1333~1334,1371,2308~2
    309,2333~2334,2444,2472,2508,2
    542,2778~2779,3890,4572
    14802 9gmo:B
    (2.59Å)

    118 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS000231198C RF00001 Homo
    sapiens

    9606
    38746087
    931

    1290

    s51

    879
    Assembly1
    rna:A:1~5069 77~79,84,88,98,100~101,103
    14803 9gmo:C
    (2.59Å)

    148 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS0000005270 RF00002 Homo
    sapiens

    9606
    38746087
    1227

    592

    993

    1215

    1271

    s37

    1238

    1178

    M085_0.6

    1389

    1360

    1352

    589

    706
    Assembly1
    rna:A:1~5069 1~22,24~37,40~41,53~54,103,108
    ,110~113,115,128,135~136,138~1
    56
    14804 9gmx:T
    (2.82Å)

    52 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS0002F12C70 RF00005 Homo
    sapiens

    9606
    39627193
    1177

    1226

    1344

    588

    1332
    Assembly1
    rna:U:77~80 3~6,76
    14805 9gr1:4
    (3.17Å)

    10 N/A N/A N/A synthetic
    construct

    32630
    39607923 Assembly1
    rna:A:1~1542 2~5,7,9~10
    14806 9gr1:A
    (3.17Å)

    1513 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS0002F10457 RF00177 Escherichia
    coli
    BL21(DE3)

    469008
    39607923 Assembly1
    rna:X:12~24 530,693,789,926,1397,1400~1403
    ,1492~1493,1498

    rna:Z:1~76 530,1054,1493
    rna:a:1~2907 702,783~784,899~900,1406~1409,
    1418,1428~1429,1473~1475,1483~
    1484,1493~1496,1517

    rna:4:2~11 929~930,1381~1382,1536~1538,15
    40~1541

    rna:Y:1~76 790,966,1229~1230,1338~1340,14
    00
    14807 9gr1:X
    (3.17Å)

    13 N/A N/A N/A synthetic
    construct

    32630
    39607923 Assembly1
    rna:A:1~1542 12~14,16~21,23
    rna:Z:1~76 19~22
    rna:Y:1~76 16~18
    14808 9gr1:Y
    (3.17Å)

    77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS00001BBAFC RF00005 Escherichia
    coli

    562
    39607923 Assembly1
    rna:A:1~1542 30~32,34,38,40~41
    rna:X:12~24 34~37
    rna:a:1~2907 3,12,24~25,74~76
    14809 9gr1:Z
    (3.17Å)

    76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS00005AA258 RF00005 Escherichia
    coli

    562
    39607923 Assembly1
    rna:A:1~1542 34~37
    rna:X:12~24 34~37
    rna:a:1~2907 20,37,52~53,63,71,74~76
    14810 9gr1:a
    (3.17Å)

    2748 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00026177A6 RF02541 Escherichia
    coli
    BL21(DE3)

    469008
    39607923 Assembly1
    rna:A:1~1542 1691,1702~1706,1833~1834,1838~
    1839,1848~1850,1916~1921,1923~
    1924,1951~1953,1963~1965

    rna:Z:1~76 885,1917,1946,2473~2474,2486,2
    510~2511,2559,2587~2589,2606

    rna:b:1~119 863~866,917~921,960,2344
    rna:Y:1~76 1911,1926~1928,2068,2255~2257,
    2259,2443,2454~2455,2606
    14811 9gr1:b
    (3.17Å)

    119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS000080E133 RF00001 Escherichia
    coli
    BL21(DE3)

    469008
    39607923 Assembly1
    rna:a:1~2907 41,78~81,89~90,96~97,99~101
    14812 9gul:L5
    (2.2Å)

    3670 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF02543 Homo
    sapiens

    9606
    40973728
    31588918

    M054_0.6

    1306

    769

    706

    1303

    762

    872

    1148

    1149

    764

    870

    167

    21

    1079

    930

    1029

    1075

    1072

    1073

    s77

    1071

    819

    1373

    938

    546

    s52

    s51

    s50

    931

    813

    936

    s59

    995

    994

    595

    1314

    991

    1312

    1311

    1028

    1150

    123

    124

    125

    1068

    s72

    1060

    s100

    s102

    52

    533

    M227_0.6

    1384

    375

    926

    822

    1128

    988

    1321

    708

    705

    1328

    707

    1124

    987

    703

    M077_0.6

    1237

    83

    1181

    797

    796

    795

    836

    837

    791

    790

    838

    1334

    s70

    1016

    1017

    1393

    610

    1012

    1013

    1236

    M290_0.6

    763

    1231

    1232

    1233

    1335

    s17

    M109_0.6

    1336

    1331

    1333

    589

    776

    M273_0.6

    s99

    1389

    902

    821

    900

    901

    906

    905

    33

    924

    970

    M044_0.6

    1245

    s62

    s96

    1227

    883

    M035_0.6

    1223

    M156_0.6

    604

    M320_0.6

    1347

    60

    s81

    M349_0.6

    1083

    175

    1026

    100

    s61

    977

    976

    974

    852

    853

    M154_0.6

    884

    s55

    979

    M153_0.6

    183

    1238

    185

    1375

    815

    1036

    503

    1034

    1035

    1212

    M102_0.6

    1211

    1216

    1042

    986

    1354

    M103_0.6

    169

    91

    1127

    M070_0.6

    M272_0.6

    M020_0.6

    M050_0.6

    1187

    1182

    1183

    1037

    727

    M347_0.6

    722

    935

    M086_0.6

    1164

    1165

    1166

    606

    886

    156

    748

    749

    608

    M061_0.6

    s48

    1055

    878

    879

    1059

    953

    952

    42

    954

    957

    1107

    1352

    774

    1215

    M104_0.6

    1173

    770

    773

    958

    1271

    1272

    1273

    779

    778

    1178

    M151_0.6

    78

    1285

    M083_0.6

    1041

    1040

    1043

    1045

    1044

    1288

    1360

    684

    800

    1368
    Assembly1
    rna:2:74~76 3909,4196~4197,4396~4397,4548
    rna:L7:1~120 1736~1738,1741,1792,1794~1796,
    1894,1909,1936,1942

    rna:L8:1~156 2~22,58,339,342~348,350~353,35
    6~357,360,362,379~380,415~430,
    1305,1333~1334,1371,2308~2309,
    2333,2444,2544,2778~2779
    14813 9gul:L7
    (2.2Å)

    120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF00001 Homo
    sapiens

    9606
    40973728
    31588918

    931

    1290

    s51

    879
    Assembly1
    rna:L5:1~5069 77~80,84,88,98,100~101,103
    14814 9gul:L8
    (2.2Å)

    156 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF00002 Homo
    sapiens

    9606
    40973728
    31588918

    1227

    592

    s24

    993

    1215

    1352

    s37

    1238

    1178

    M085_0.6

    1389

    1360

    589

    375

    M106_0.6
    Assembly1
    rna:L5:1~5069 4~22,24~37,40,53~54,103,110,11
    2~113,123,126,138~149,151~156
    14815 9gup:A
    (2.8Å)

    1539 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS0002F10452 RF00177 Escherichia
    coli
    K-12

    83333
    39607923 Assembly1
    rna:X:4~20 1534~1541
    14816 9gup:X
    (2.8Å)

    17 N/A N/A N/A synthetic
    construct

    32630
    39607923 Assembly1
    rna:A:1~1541 4~11
    14817 9guq:A
    (3.1Å)

    1539 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS0002F10452 RF00177 Escherichia
    coli
    K-12

    83333
    39607923 Assembly1
    rna:W:1~77 790,966,1229,1338~1340,1400
    rna:X:5~27 926,1397,1400~1402,1498,1534~1
    540
    14818 9guq:W
    (3.1Å)

    77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS00001BBAFC RF00005 Escherichia
    coli
    K-12

    83333
    39607923 Assembly1
    rna:A:1~1541 31~32,35,39~42
    rna:X:5~27 35~38
    14819 9guq:X
    (3.1Å)

    20 N/A N/A N/A synthetic
    construct

    32630
    39607923 Assembly1
    rna:A:1~1541 5~10,15~18,22~23
    rna:W:1~77 16~18
    14820 9gus:A
    (3.5Å)

    1539 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS0002F10452 RF00177 Escherichia
    coli
    K-12

    83333
    39607923 Assembly1
    rna:X:3~20 1535~1541
    14821 9gus:X
    (3.5Å)

    18 N/A N/A N/A synthetic
    construct

    32630
    39607923 Assembly1
    rna:A:1~1541 4~10
    14822 9gut:A
    (2.8Å)

    1539 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS0002F1044B RF00177
    RF01959
    Escherichia
    coli
    K-12

    83333
    39607923 Assembly1
    rna:X:4~20 1534~1541
    14823 9gut:X
    (2.8Å)

    17 N/A N/A N/A synthetic
    construct

    32630
    39607923 Assembly1
    rna:A:1~1541 4~11
    14824 9guu:A
    (2.5Å)

    1539 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS0002F10452 RF00177 Escherichia
    coli
    K-12

    83333
    39607923 Assembly1
    rna:X:4~20 1534~1541
    14825 9guu:X
    (2.5Å)

    17 N/A N/A N/A synthetic
    construct

    32630
    39607923 Assembly1
    rna:A:1~1541 4~11
    14826 9guv:A
    (3.0Å)

    1539 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS0002F10452 RF00177 Escherichia
    coli
    K-12

    83333
    39607923 Assembly1
    rna:X:4~20 1534~1541
    14827 9guv:X
    (3.0Å)

    17 N/A N/A N/A synthetic
    construct

    32630
    39607923 Assembly1
    rna:A:1~1541 4~11
    14828 9guw:A
    (3.1Å)

    1526 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS0002F10452 RF00177 Escherichia
    coli
    K-12

    83333
    39607923 Assembly1
    rna:X:5~53 1535~1540
    14829 9guw:X
    (3.1Å)

    22 N/A N/A N/A synthetic
    construct

    32630
    39607923 Assembly1
    rna:A:1~1540 5~10
    14830 9gux:A
    (3.3Å)

    1512 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00003C2BBD RF00177 Escherichia
    coli
    K-12

    83333
    39607923 Assembly1
    rna:X:5~52 1535~1541
    14831 9gux:X
    (3.3Å)

    21 N/A N/A N/A synthetic
    construct

    32630
    39607923 Assembly1
    rna:A:1~1542 5~10
    14832 9gxx:A
    (2.61Å)

    1520 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00000ABFE9 RF00177 Escherichia
    coli

    562
    40571681 Assembly1
    rna:V:2~76 693~695
    rna:X:13~23 693,926,1397,1400~1402,1493,14
    98

    rna:Z:2~76 790,966,1229,1338~1340,1400
    rna:a:1~2903 702,784,899,1407~1409,1418,142
    9,1474,1483~1484,1492,1494~149
    6,1517
    14833 9gxx:V
    (2.61Å)

    76 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Escherichia
    coli

    562
    40571681 Assembly1
    rna:a:1~2903 71,76
    14834 9gxx:X
    (2.61Å)

    11 N/A N/A N/A Escherichia
    coli

    562
    40571681 Assembly1
    rna:A:1~1534 13,15~19,22~23
    rna:Y:1~76 19~21
    rna:Z:2~76 16~18
    14835 9gxx:Y
    (2.61Å)

    93 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Escherichia
    coli

    562
    40571681 Assembly1
    rna:A:1~1534 36~37
    rna:X:13~23 34~36
    rna:a:1~2903 19,52,56,63,74~76
    14836 9gxx:Z
    (2.61Å)

    76 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Escherichia
    coli

    562
    40571681 Assembly1
    rna:A:1~1534 30~32,34,38~41
    rna:X:13~23 34~37
    rna:a:1~2903 11~13,24~25,74~76
    14837 9gxx:a
    (2.61Å)

    2753 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF02541 Escherichia
    coli

    562
    40571681 Assembly1
    rna:A:1~1534 1700~1704,1832,1837,1848,1912~
    1916,1919~1920,1947~1949,1959~
    1961

    rna:V:2~76 1851~1852,2394~2395,2421~2422
    rna:Y:1~76 896~897,2470,2482,2506~2507,25
    53,2555,2583~2584,2602

    rna:Z:2~76 1907~1909,1922~1924,2063~2064,
    2251~2253,2450~2451,2602

    rna:b:1~119 861~863,915,917~919,958,2339
    14838 9gxx:b
    (2.61Å)

    119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF00001 Escherichia
    coli

    562
    40571681 Assembly1
    rna:a:1~2903 41,78~81,89~90,96~97,99~100
    14839 9gy4:5
    (3.0Å)

    3528 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF02543 Homo
    sapiens

    9606
    40315331
    M054_0.6

    1306

    769

    1303

    762

    42

    1148

    1149

    764

    870

    167

    21

    1079

    930

    1072

    1073

    s77

    1071

    819

    1373

    938

    546

    s52

    s51

    s50

    931

    813

    936

    s59

    995

    994

    1314

    991

    1312

    1311

    1028

    1150

    673

    123

    124

    125

    1068

    s72

    1060

    s100

    s102

    52

    533

    M227_0.6

    1384

    375

    926

    822

    1128

    988

    1321

    1083

    704

    705

    1328

    707

    1124

    987

    1126

    703

    M077_0.6

    1237

    1037

    83

    1181

    797

    796

    795

    836

    837

    791

    790

    838

    1334

    s70

    1016

    1017

    1393

    610

    1012

    1013

    1236

    M290_0.6

    763

    1231

    1232

    1233

    1335

    1331

    M109_0.6

    1336

    1238

    1239

    1333

    589

    776

    M273_0.6

    s99

    1389

    902

    821

    900

    901

    906

    905

    33

    924

    s17

    853

    M044_0.6

    1245

    1183

    s62

    s96

    1227

    883

    M035_0.6

    1223

    M156_0.6

    1165

    1347

    60

    s81

    M349_0.6

    595

    1026

    100

    977

    976

    974

    852

    970

    M154_0.6

    884

    s55

    979

    M153_0.6

    183

    185

    1375

    1036

    706

    1034

    1035

    1212

    M102_0.6

    1211

    1216

    1042

    986

    467

    M148_0.6

    1354

    708

    M103_0.6

    169

    91

    1127

    162

    M070_0.6

    M272_0.6

    M020_0.6

    M050_0.6

    1187

    1182

    815

    503

    727

    M347_0.6

    722

    935

    M086_0.6

    1164

    604

    1166

    606

    886

    156

    748

    749

    608

    M061_0.6

    s48

    1055

    878

    879

    1059

    953

    952

    872

    954

    957

    1107

    1352

    774

    1215

    M104_0.6

    1173

    770

    773

    958

    1271

    1272

    1273

    779

    778

    1178

    M151_0.6

    78

    1285

    M083_0.6

    1041

    1040

    1043

    1045

    1044

    1288

    354

    688

    1360

    684

    800
    Assembly1
    rna:7:1~120 1736~1739,1741,1792~1796,1894,
    1909,1936,1942

    rna:8:1~156 1~22,58,146~147,339,341~348,35
    0~353,355~357,360,362,379~380,
    415~430,1304~1305,1333~1334,13
    71,2308~2309,2312~2313,2333~23
    34,2355,2444,2472,2508,2778~27
    80

    rna:G:1~76 4196~4197,4255~4256,4396~4397,
    4531,4548
    14840 9gy4:7
    (3.0Å)

    120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF00001 Homo
    sapiens

    9606
    40315331
    931

    1290

    s51

    879
    Assembly1
    rna:5:1~5069 77~80,84,88,98,100~104
    14841 9gy4:8
    (3.0Å)

    148 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS0000005270 RF00002 Homo
    sapiens

    9606
    40315331
    1227

    592

    s24

    993

    1215

    1271

    s37

    1238

    1178

    M085_0.6

    1389

    1360

    1352

    589

    375

    706
    Assembly1
    rna:5:1~5069 4~22,24~37,40~41,53~54,103,108
    ,110~113,115,136,138~149,151~1
    56
    14842 9gy4:G
    (3.0Å)

    76 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Homo
    sapiens

    9606
    40315331
    6
    Assembly1
    rna:5:1~5069 19,56~57,74~76
    14843 9gyt:1
    (2.11Å)

    2922 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF02541 Brassica
    oleracea
    var.
    botrytis

    3715
    41330901 Assembly1
    rna:3:1~118 1006~1008,1063~1067,1098
    rna:2:3~1848 2031,2045~2046,2170~2171,2230~
    2232,2237~2238,2265~2268,2277~
    2279
    14844 9gyt:2
    (2.11Å)

    1766 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF00177 Brassica
    oleracea
    var.
    botrytis

    3715
    41330901 Assembly1
    rna:1:16~3169 698,1669~1672,1680~1682,1691,1
    784,1792~1793,1802~1805,1826
    14845 9gyt:3
    (2.11Å)

    118 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS0000240B4B RF00001 Brassica
    oleracea
    var.
    botrytis

    3715
    41330901 Assembly1
    rna:1:16~3169 81~84,87,95,97~98
    14846 9h0l:A
    (2.49Å)

    1529 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00000ABFE9 RF00177 Escherichia
    coli

    562
    40571681 Assembly1
    rna:X:13~23 530,693,926,1196,1397,1400~140
    2,1492~1493,1498

    rna:Y:1~76 530,1054,1493
    rna:Z:2~76 790,966,1229,1338~1340,1400
    rna:a:1~2903 702,784,899,1407~1409,1418,142
    9,1473~1475,1483~1484,1494~149
    6,1517
    14847 9h0l:V
    (2.49Å)

    76 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Escherichia
    coli

    562
    40571681 Assembly1
    rna:a:1~2903 70~71,76
    14848 9h0l:X
    (2.49Å)

    11 N/A N/A N/A Escherichia
    coli

    562
    40571681 Assembly1
    rna:A:1~1534 13,15~21,23
    rna:Y:1~76 19~22
    rna:Z:2~76 16~18
    14849 9h0l:Y
    (2.49Å)

    93 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Escherichia
    coli

    562
    40571681 Assembly1
    rna:A:1~1534 34~37
    rna:X:13~23 34~37
    rna:a:1~2903 19,37~38,56,63,74~76
    14850 9h0l:Z
    (2.49Å)

    76 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Escherichia
    coli

    562
    40571681 Assembly1
    rna:A:1~1534 30~32,34,38,40~41
    rna:X:13~23 34~37
    rna:a:1~2903 11~13,24~25,74~76
    14851 9h0l:a
    (2.49Å)

    2753 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF02541 Escherichia
    coli

    562
    40571681 Assembly1
    rna:A:1~1534 1700~1703,1832,1837,1848,1912~
    1916,1919~1920,1947~1948,1959~
    1961

    rna:V:2~76 1851~1852,2394~2395,2421~2422
    rna:Y:1~76 896,1913,2482,2506~2507,2553~2
    555,2583~2584

    rna:Z:2~76 1907~1909,1922~1923,2064,2251~
    2253,2450~2451,2602

    rna:b:1~119 861~863,915~919,958,2339~2340
    14852 9h0l:b
    (2.49Å)

    119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF00001 Escherichia
    coli

    562
    40571681 Assembly1
    rna:a:1~2903 41,78~81,89,96~97,99~100
    14853 9h21:B
    (3.33Å)

    22 N/A N/A N/A synthetic
    construct

    32630
    41702403 Assembly1
    rna:C:11 0~11
    14854 9h21:C
    (3.33Å)

    62 N/A N/A RF02348 synthetic
    construct

    32630
    41702403 Assembly1
    rna:B:-10~11 11~16,18~24
    14855 9h2g:B
    (3.28Å)

    26 N/A N/A N/A synthetic
    construct

    32630
    41702403 Assembly1
    rna:C:8~72 0~14
    14856 9h2g:C
    (3.28Å)

    65 N/A N/A RF02348 synthetic
    construct

    32630
    41702403 Assembly1
    rna:B:-11~14 8~16,18~24
    14857 9h2m:B
    (3.06Å)

    26 N/A N/A N/A synthetic
    construct

    32630
    41702403 Assembly1
    rna:C:8~72 0~14
    14858 9h2m:C
    (3.06Å)

    65 N/A N/A RF02348 synthetic
    construct

    32630
    41702403 Assembly1
    rna:B:-11~14 8~16,18~24
    14859 9h3g:3
    (1.82Å)

    162 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF00002 Arabidopsis
    thaliana

    3702
    41678627 Assembly1
    rna:A:1~3385 3~4,7~26,28~37,39~41,44~45,57~
    58,108,110,112~113,115,117~119
    ,142~163
    14860 9h3g:A
    (1.82Å)

    3149 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF02540
    RF02541
    RF02543
    Arabidopsis
    thaliana

    3702
    41678627
    555

    M239_0.6
    Assembly1
    rna:3:3~164 1~21,57,141,327~334,336~339,34
    2~343,346,348,365~366,401~416,
    640,668~669,704,1403~1404,1428
    ~1429,1450,1500,1539,1550,1566
    ,1585~1586,1832~1834,2384,2584
    ,2994~2995,3140

    rna:i2:1~76 2254,2618~2620,2677,2818~2819,
    2970

    rna:C3:1~119 1007~1010,1012,1062~1066,1165,
    1180,1207,1212~1213

    rna:h1:1~1804 855~857,2124,2203,2253~2257,22
    60~2261,2288~2290,2300~2302

    rna:W2:1~76 2208~2209,2233~2234,2451,2453,
    2763~2764,2792~2793
    14861 9h3g:B1
    (1.82Å)

    12 N/A N/A N/A Arabidopsis
    thaliana

    3702
    41678627 Assembly1
    rna:i2:1~76 25~27
    rna:h1:1~1804 18~19,21~26,29
    rna:W2:1~76 22~24
    14862 9h3g:C3
    (1.82Å)

    119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF00001 Arabidopsis
    thaliana

    3702
    41678627 Assembly1
    rna:A:1~3385 77~80,84,88,98,100~103
    14863 9h3g:W2
    (1.82Å)

    76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS00001504D0 RF00005 Arabidopsis
    thaliana

    3702
    41678627 Assembly1
    rna:A:1~3385 3~4,17,19,71,75~76
    rna:h1:1~1804 30~32,34,38~42
    rna:B1:18~29 34~37
    14864 9h3g:h1
    (1.82Å)

    1612 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF01960
    RF02542
    RF01959
    RF00177
    Arabidopsis
    thaliana

    3702
    41678627
    516
    Assembly1
    rna:A:1~3385 630,914,972~974,1646~1649,1657
    ~1659,1750~1751,1760~1763,1784

    rna:i2:1~76 579,1275,1760
    rna:B1:18~29 905,1151,1636,1639~1640,1759~1
    760,1765

    rna:W2:1~76 1002,1192,1465~1466,1577~1579,
    1639
    14865 9h3g:i2
    (1.82Å)

    76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS00001504D0 RF00005 Arabidopsis
    thaliana

    3702
    41678627 Assembly1
    rna:A:1~3385 37~38,56,74~76
    rna:h1:1~1804 34~37
    rna:B1:18~29 34~37
    14866 9h3q:A
    (4.02Å)

    2569 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS0000B21DED RF02541 Escherichia
    coli

    562
    39794318 Assembly1
    rna:B:1~120 861~863,915,918,958~959
    14867 9h3q:B
    (4.02Å)

    120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00008116C5 RF00001 Escherichia
    coli

    562
    39794318 Assembly1
    rna:A:1~2903 78~80,89,97,99~100
    14868 9h3r:A
    (4.12Å)

    2576 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS0000A76322 RF02541 Escherichia
    coli

    562
    39794318 Assembly1
    rna:B:1~120 861~863,917~919,958~959
    14869 9h3r:B
    (4.12Å)

    120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00008116C5 RF00001 Escherichia
    coli

    562
    39794318 Assembly1
    rna:A:1~2903 78~80,89,96~100
    14870 9h3s:A
    (4.16Å)

    2715 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS0000A76322 RF02541 Escherichia
    coli

    562
    39794318 Assembly1
    rna:B:1~120 861~863,917~918,958~959
    14871 9h3s:B
    (4.16Å)

    120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00008116C5 RF00001 Escherichia
    coli

    562
    39794318 Assembly1
    rna:A:1~2903 78~81,89,97,99~100
    14872 9h3v:A
    (3.55Å)

    2490 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS0000B21DED RF02541 Escherichia
    coli

    562
    39794318 Assembly1
    rna:B:1~119 861~863,915,917~918
    14873 9h3v:B
    (3.55Å)

    119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00008116C5 RF00001 Escherichia
    coli

    562
    39794318 Assembly1
    rna:A:1~2903 78~80,97,99~100
    14874 9h3w:A
    (5.38Å)

    2650 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS000080E25C RF02541 Escherichia
    coli

    562
    39794318 Assembly1
    rna:B:1~119 861~863,915,917~919,958
    14875 9h3w:B
    (5.38Å)

    119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00008116C5 RF00001 Escherichia
    coli

    562
    39794318 Assembly1
    rna:A:1~2903 78~80,89,96,99~100
    14876 9h3x:A
    (4.12Å)

    2637 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS000080E25C RF02541 Escherichia
    coli

    562
    39794318 Assembly1
    rna:B:1~119 861~863,915,917~919,958
    14877 9h3x:B
    (4.12Å)

    119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00008116C5 RF00001 Escherichia
    coli

    562
    39794318 Assembly1
    rna:A:1~2903 78~81,89,96~97,99~100
    14878 9h3y:A
    (3.09Å)

    2895 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS0000A76322 RF02541 Escherichia
    coli

    562
    39794318 Assembly1
    rna:B:1~120 861~862,915,917~919,958~959
    14879 9h3y:B
    (3.09Å)

    120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00008116C5 RF00001 Escherichia
    coli

    562
    39794318 Assembly1
    rna:A:1~2903 78~81,89,96~97,99~100
    14880 9h3z:A
    (2.98Å)

    2900 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00004B0F34 RF02541 Escherichia
    coli

    562
    39794318 Assembly1
    rna:B:1~120 861~863,917~919,958~959
    14881 9h3z:B
    (2.98Å)

    120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00008116C5 RF00001 Escherichia
    coli

    562
    39794318 Assembly1
    rna:A:1~2903 78~81,89,96~97,99~100
    14882 9h4n:A2
    (2.46Å)

    3609 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF02543 Mus
    musculus

    10090
    N/A
    1320

    1325

    153

    M188_0.6

    113

    350

    1379

    513
    Assembly1
    rna:B2:1~120 1538~1540,1543,1594,1596~1598,
    1696,1711,1738,1744

    rna:C2:1~156 1~22,58,146,339,342~348,350~35
    3,355~357,360,362,379~380,415~
    430,1118~1119,1147~1148,1185,2
    063~2064,2067,2087~2088,2110~2
    112,2199,2227,2241~2243,2263~2
    264,2299,2533~2534,3546,3815

    rna:m2:1~1871 1376~1378,2622,2639~2640,3285,
    3415~3416,3419,3422,3450~3452,
    3462~3464

    rna:n2:2~76 3370~3371,3395~3396,3614,3696,
    3993~3994,4022~4023
    14883 9h4n:B2
    (2.46Å)

    120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF00001 Mus
    musculus

    10090
    N/A Assembly1
    rna:A2:1~4715 77~80,84,88,98,100~101,103~104
    14884 9h4n:Bx
    (2.46Å)

    10 N/A N/A N/A Mus
    musculus

    10090
    N/A Assembly1
    rna:m2:1~1871 47~50,53~54
    rna:n2:2~76 45~46
    14885 9h4n:C2
    (2.46Å)

    156 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF00002 Mus
    musculus

    10090
    N/A Assembly1
    rna:A2:1~4715 3~22,24~37,40~41,53~54,103,108
    ,110~113,115,124~126,136,138~1
    56
    14886 9h4n:m2
    (2.46Å)

    1724 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF01960 Mus
    musculus

    10090
    N/A
    M207_0.6

    576
    Assembly1
    rna:A2:1~4715 370,679,1030~1032,1182,1710~17
    12,1721~1723,1733,1817~1818,18
    26~1829

    rna:n2:2~76 1250,1526,1641~1643
    rna:Bx:45~54 616,626,628,1703~1704,1832
    14887 9h4n:n2
    (2.46Å)

    75 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Mus
    musculus

    10090
    N/A
    576
    Assembly1
    rna:A2:1~4715 4~5,56~57,70~71,75~76
    rna:m2:1~1871 30~32,34,41~42
    rna:Bx:45~54 36~37
    14888 9h6i:2
    (2.2Å)

    76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS00001504D0 RF00005 Arabidopsis
    thaliana

    3702
    41678627 Assembly1
    rna:A:1~3385 37~38,56,74~76
    rna:h1:1~1804 34~37
    rna:B1:18~29 34~37
    14889 9h6i:3
    (2.2Å)

    162 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF00002 Arabidopsis
    thaliana

    3702
    41678627 Assembly1
    rna:A:1~3385 3~4,7~26,28~37,39~41,44~45,57~
    58,108,113,115,117~119,142~163
    14890 9h6i:A
    (2.2Å)

    3149 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF02540
    RF02541
    RF02543
    Arabidopsis
    thaliana

    3702
    41678627
    555

    M239_0.6
    Assembly1
    rna:2:1~76 2254,2618~2620,2677,2818~2819,
    2970

    rna:3:3~164 1~21,57,141,327~334,336~339,34
    2~343,346,348,365~366,401~416,
    640,668~669,704,1403~1404,1428
    ,1450,1500,1539~1540,1566,1585
    ~1586,1832~1834,2384,2584,2994
    ~2995,3140

    rna:C3:1~119 1007~1010,1012,1062~1066,1165,
    1180,1207,1212~1213

    rna:h1:1~1804 855~857,2124,2253~2257,2260~22
    61,2288~2290,2300~2301

    rna:W2:1~76 2208~2209,2233~2234,2451,2453,
    2763~2764,2792~2793
    14891 9h6i:B1
    (2.2Å)

    12 N/A N/A N/A Arabidopsis
    thaliana

    3702
    41678627 Assembly1
    rna:2:1~76 25~27
    rna:h1:1~1804 19,22~27,29
    rna:W2:1~76 22~24
    14892 9h6i:C3
    (2.2Å)

    119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF00001 Arabidopsis
    thaliana

    3702
    41678627 Assembly1
    rna:A:1~3385 77~80,84,88,98,100~103
    14893 9h6i:W2
    (2.2Å)

    76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS00001504D0 RF00005 Arabidopsis
    thaliana

    3702
    41678627 Assembly1
    rna:A:1~3385 3~4,17,19,71,75~76
    rna:h1:1~1804 30~32,34,38,40~41
    rna:B1:18~29 34~37
    14894 9h6i:h1
    (2.2Å)

    1612 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF01960
    RF02542
    RF01959
    RF00177
    Arabidopsis
    thaliana

    3702
    41678627
    516
    Assembly1
    rna:2:1~76 579,1275,1760
    rna:A:1~3385 630,972~974,1646~1648,1657~165
    9,1750~1751,1761~1763,1784

    rna:B1:18~29 579,905,1151,1636,1639~1640,17
    59~1760,1765

    rna:W2:1~76 1002,1192,1465~1466,1577~1579,
    1639
    14895 9h6y:1
    (2.9Å)

    75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS0000326EAC RF00005 Oryctolagus
    cuniculus

    9986
    41272315 Assembly1
    rna:2:1~1863 30~32,34,38~39,41
    rna:3:137~145 34~37
    14896 9h6y:2
    (2.9Å)

    1741 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS0001A16A63 RF01960
    RF02542
    RF01959
    RF00177
    Oryctolagus
    cuniculus

    9986
    41272315 Assembly1
    rna:1:2~76 1054,1244,1519,1634~1636,1696
    rna:3:137~145 957,1203,1696~1697,1824
    14897 9h74:1
    (2.9Å)

    75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS0000326EAC RF00005 Oryctolagus
    cuniculus

    9986
    41272315 Assembly1
    rna:2:1~1863 30~32,34,38~39,41
    rna:3:137~145 34~37
    14898 9h74:2
    (2.9Å)

    1741 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS0001A16A63 RF01960
    RF02542
    RF01959
    RF00177
    Oryctolagus
    cuniculus

    9986
    41272315 Assembly1
    rna:1:2~76 1054,1244,1519,1634~1636,1696
    rna:3:137~145 957,1203,1696~1697,1824
    14899 9h82:B
    (7.29Å)

    36 N/A URS0002F12C67 N/A synthetic
    construct

    32630
    40521664 Assembly1
    rna:E:1~36 1~23,25
    14900 9h82:E
    (7.29Å)

    22 N/A URS0002F12C58 N/A synthetic
    construct

    32630
    40521664 Assembly1
    rna:B:1~36 1~20,35~36
    << < 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 > >>
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    Reference:
  • Chengxin Zhang, Lydia Freddolino (2024) "FURNA: a database for function annotations of RNA structures," PLOS Biology 22(7): e3002476.