SEQ2FUN

FURNA
Download all results in tab-seperated text for 16611 RNAs.
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    # PDB
    (Resolution)
    Length EC number
    & GO term
    RNAcentral Rfam Taxon PubMed ATtRACT
    motif
    Ligand &
    binding nucleotides
    14901 9h83:A
    (7.8Å)

    16 N/A URS0002F12C67 N/A synthetic
    construct

    32630
    40521664 Assembly1
    rna:C:1~36 2~16
    rna:B:1~36 1~2,13~14
    14902 9h83:B
    (7.8Å)

    36 N/A URS0002F12C67 N/A synthetic
    construct

    32630
    40521664 Assembly1
    rna:A:1~16 25~26,36
    rna:D:1~36 2~23
    rna:C:1~36 23~36
    14903 9h83:C
    (7.8Å)

    36 N/A URS0002F12C58 N/A synthetic
    construct

    32630
    40521664 Assembly1
    rna:A:1~16 5~20,22~23
    rna:D:1~36 34~35
    rna:B:1~36 1,21~34,36
    14904 9h83:D
    (7.8Å)

    21 N/A URS0002F12C58 N/A synthetic
    construct

    32630
    40521664 Assembly1
    rna:C:1~36 35~36
    rna:B:1~36 1~19,35~36
    14905 9h86:A
    (9.3Å)

    36 N/A URS0002F12C67 N/A synthetic
    construct

    32630
    40521664 Assembly1
    rna:D:1~36 23~36
    rna:C:1~36 1~23
    rna:B:1~36 13~14,25~26,36
    14906 9h86:B
    (9.3Å)

    36 N/A URS0002F12C67 N/A synthetic
    construct

    32630
    40521664 Assembly1
    rna:A:1~36 1,13~14,25~26
    rna:D:1~36 1~23
    rna:C:1~36 23~36
    14907 9h86:C
    (9.3Å)

    36 N/A URS0002F12C58 N/A synthetic
    construct

    32630
    40521664 Assembly1
    rna:A:1~36 1~20,22~23,35~36
    rna:D:1~36 34~35
    rna:B:1~36 21~34
    14908 9h86:D
    (9.3Å)

    36 N/A URS0002F12C58 N/A synthetic
    construct

    32630
    40521664 Assembly1
    rna:A:1~36 21~34
    rna:C:1~36 34~35
    rna:B:1~36 1~20,22~23,35~36
    rna:G:1~36 20~21
    14909 9h86:E
    (9.3Å)

    36 N/A URS0002F12C67 N/A synthetic
    construct

    32630
    40521664 Assembly1
    rna:H:1~36 23~36
    rna:G:1~36 1~23
    rna:F:1~36 1,13~14,25~26,36
    14910 9h86:F
    (9.3Å)

    36 N/A URS0002F12C67 N/A synthetic
    construct

    32630
    40521664 Assembly1
    rna:E:1~36 1~2,13~14,25~26,36
    rna:H:1~36 1~23
    rna:G:1~36 23~36
    14911 9h86:G
    (9.3Å)

    36 N/A URS0002F12C58 N/A synthetic
    construct

    32630
    40521664 Assembly1
    rna:A:1~36 19~20
    rna:D:1~36 20~21
    rna:E:1~36 1~20,22~23,35~36
    rna:H:1~36 34~35
    rna:F:1~36 21~34
    14912 9h86:H
    (9.3Å)

    36 N/A URS0002F12C58 N/A synthetic
    construct

    32630
    40521664 Assembly1
    rna:E:1~36 21~34
    rna:G:1~36 34~35
    rna:F:1~36 1~20,22~23,35~36
    14913 9h8a:A
    (9.6Å)

    36 N/A URS0002F12C67 N/A synthetic
    construct

    32630
    40521664 Assembly1
    rna:D:1~36 23~36
    rna:C:1~36 1~23
    rna:B:1~36 13~14,25~26,36
    14914 9h8a:B
    (9.6Å)

    36 N/A URS0002F12C67 N/A synthetic
    construct

    32630
    40521664 Assembly1
    rna:A:1~36 1,13~14,25~26
    rna:D:1~36 1~23
    rna:C:1~36 23~36
    14915 9h8a:C
    (9.6Å)

    36 N/A URS0002F12C58 N/A synthetic
    construct

    32630
    40521664 Assembly1
    rna:A:1~36 1~20,22~23,35~36
    rna:D:1~36 34~35
    rna:B:1~36 21~34
    14916 9h8a:D
    (9.6Å)

    36 N/A URS0002F12C58 N/A synthetic
    construct

    32630
    40521664 Assembly1
    rna:A:1~36 21~34
    rna:C:1~36 34~35
    rna:B:1~36 1~20,22~23,35~36
    rna:G:1~36 20~21
    14917 9h8a:E
    (9.6Å)

    36 N/A URS0002F12C67 N/A synthetic
    construct

    32630
    40521664 Assembly1
    rna:H:1~36 23~36
    rna:G:1~36 1~23
    rna:F:1~36 1,13~14,25~26,36
    14918 9h8a:F
    (9.6Å)

    36 N/A URS0002F12C67 N/A synthetic
    construct

    32630
    40521664 Assembly1
    rna:E:1~36 1~2,13~14,25~26,36
    rna:H:1~36 1~23
    rna:G:1~36 23~36
    14919 9h8a:G
    (9.6Å)

    36 N/A URS0002F12C58 N/A synthetic
    construct

    32630
    40521664 Assembly1
    rna:A:1~36 19~20
    rna:D:1~36 20~21
    rna:E:1~36 1~20,22~23,35~36
    rna:H:1~36 34~35
    rna:F:1~36 21~34
    14920 9h8a:H
    (9.6Å)

    36 N/A URS0002F12C58 N/A synthetic
    construct

    32630
    40521664 Assembly1
    rna:E:1~36 21~34
    rna:G:1~36 34~35
    rna:F:1~36 1~20,22~23,35~36
    14921 9h91:A
    (2.7Å)

    2718 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF02541 Vibrio
    natriegens

    691
    40331629 Assembly1
    rna:B:1~121 850~853,904,906~908,946
    14922 9h91:B
    (2.7Å)

    121 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF00001 Vibrio
    natriegens

    691
    40331629 Assembly1
    rna:A:1~2888 79~82,90~91,97~98,100~101
    14923 9h9h:3
    (3.8Å)

    77 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Escherichia
    coli

    562
    39386670 Assembly1
    rna:2:15~18 34~38
    rna:A:1~1534 30~32,34,40~41
    14924 9h9h:A
    (3.8Å)

    1534 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF00177 Escherichia
    coli

    562
    39386670 Assembly1
    rna:2:15~18 926,1400,1505
    rna:3:0~76 966,1230,1338~1340,1400
    14925 9h9i:1
    (3.2Å)

    456 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS0002311995 RF00177 Escherichia
    coli

    562
    39386670 Assembly1
    rna:3:28~44 966,1229~1230,1338~1339
    14926 9h9i:3
    (3.2Å)

    17 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Escherichia
    coli

    562
    39386670 Assembly1
    rna:1:931~1386 31,35,41~42
    rna:2:16~19 35~38
    14927 9h9k:1
    (3.8Å)

    456 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS0002311995 RF00177 Escherichia
    coli

    562
    39386670 Assembly1
    rna:3:28~45 966,1338~1339
    14928 9h9k:3
    (3.8Å)

    17 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Escherichia
    coli

    562
    39386670 Assembly1
    rna:1:931~1386 35,42
    rna:2:15~19 35~38
    14929 9ha4:A
    (4.26Å)

    1977 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS0003054906 RF02541 Escherichia
    coli

    562
    39794318 Assembly1
    rna:B:1~119 861~863,915~918
    14930 9ha4:B
    (4.26Å)

    119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00008116C5 RF00001 Escherichia
    coli

    562
    39794318 Assembly1
    rna:A:1~2903 78~80,96~101
    14931 9ha6:A
    (3.08Å)

    2900 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00004B0F34 RF02541 Escherichia
    coli

    562
    39794318 Assembly1
    rna:B:1~120 861~863,917~919,958~959
    14932 9ha6:B
    (3.08Å)

    120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00008116C5 RF00001 Escherichia
    coli

    562
    39794318 Assembly1
    rna:A:1~2903 78~81,89,96~97,99~100
    14933 9ha7:A
    (4.37Å)

    1988 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS0000B21DED RF02541 Escherichia
    coli

    562
    39794318 Assembly1
    rna:B:1~120 861~863,915,918,958~959
    14934 9ha7:B
    (4.37Å)

    120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00008116C5 RF00001 Escherichia
    coli

    562
    39794318 Assembly1
    rna:A:1~2903 78~80,89,97,99~100
    14935 9hc4:D8
    (3.2Å)

    115 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00029156FC RF00001 Psychrobacter
    urativorans

    45610
    40113756 Assembly1
    rna:Z2:9~2868 76~79,93~94,96~97
    14936 9hc4:Z2
    (3.2Å)

    2705 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS000291572D RF02541 Psychrobacter
    urativorans

    45610
    40113756 Assembly1
    rna:D8:1~115 846~849,900~904
    rna:iN:48~1578 1677,1689,1691~1692,1818,1823,
    1834,1898~1902,1905~1906,1933~
    1934,1945~1947
    14937 9hc4:iN
    (3.2Å)

    1503 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS0003402221 RF00177 Psychrobacter
    urativorans

    45610
    40113756 Assembly1
    rna:Z2:9~2868 746,828,943,1452~1454,1463,147
    4,1519~1520,1528~1529,1537~154
    1,1562
    14938 9hes:2
    (2.25Å)

    76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS00001504D0 RF00005 Arabidopsis
    thaliana

    3702
    41678627 Assembly1
    rna:A:1~3385 37~38,56,74~76
    rna:h1:1~1804 34~37
    rna:B1:18~29 34~37
    14939 9hes:3
    (2.25Å)

    162 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF00002 Arabidopsis
    thaliana

    3702
    41678627 Assembly1
    rna:A:1~3385 3~4,7~26,28~37,39~41,44~45,57~
    58,108,113,115,117~119,142~163
    14940 9hes:A
    (2.25Å)

    3149 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF02540
    RF02541
    RF02543
    Arabidopsis
    thaliana

    3702
    41678627
    555

    M239_0.6
    Assembly1
    rna:3:3~164 1~21,57,141,327~334,336~339,34
    2~343,346,348,365~366,401~416,
    640,668~669,704,1403~1404,1428
    ,1450,1500,1539,1550,1566,1585
    ~1586,1832~1834,2384,2584,2994
    ~2995,3140

    rna:2:1~76 2254,2618~2620,2677,2818~2819,
    2953,2970

    rna:C3:1~119 1007~1010,1012,1062~1066,1165,
    1180,1207,1213

    rna:h1:1~1804 855~856,2124,2253~2257,2260~22
    61,2288~2290,2300~2302

    rna:W2:1~76 2208~2209,2233~2234,2451,2453,
    2763~2764,2792~2793
    14941 9hes:B1
    (2.25Å)

    12 N/A N/A N/A Arabidopsis
    thaliana

    3702
    41678627 Assembly1
    rna:2:1~76 25~27
    rna:h1:1~1804 19,22~26,29
    rna:W2:1~76 22~24
    14942 9hes:C3
    (2.25Å)

    119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF00001 Arabidopsis
    thaliana

    3702
    41678627 Assembly1
    rna:A:1~3385 77~80,84,88,98,100~103
    14943 9hes:W2
    (2.25Å)

    76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS00001504D0 RF00005 Arabidopsis
    thaliana

    3702
    41678627 Assembly1
    rna:A:1~3385 3~4,17,19,71~72,75~76
    rna:h1:1~1804 30~32,34,38~42
    rna:B1:18~29 34~37
    14944 9hes:h1
    (2.25Å)

    1612 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF01960
    RF02542
    RF01959
    RF00177
    Arabidopsis
    thaliana

    3702
    41678627
    516
    Assembly1
    rna:A:1~3385 630,972~973,1646~1649,1657~165
    9,1750~1751,1761~1763,1784

    rna:2:1~76 579,1275,1760
    rna:B1:18~29 905,1151,1636,1639~1640,1759~1
    760,1765

    rna:W2:1~76 1002,1192,1465~1466,1577~1579,
    1639
    14945 9hfo:5
    (3.1Å)

    66 N/A N/A N/A Homo
    sapiens

    9606
    40240327
    749

    996

    779

    M043_0.6

    1144
    Assembly1
    rna:6:1~3 34~37
    rna:A:648~1602 29~32,34,38~42
    14946 9hfo:A
    (3.1Å)

    909 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF00177 Homo
    sapiens

    9606
    40240327
    1321

    886

    1302

    156

    748

    749

    1207

    M027_0.6

    979

    M089_0.6

    82

    495

    175

    93

    399

    492

    s44

    M043_0.6

    M033_0.6

    1194

    1197

    1196

    938

    M142_0.6

    509

    1290

    1031

    1393

    760

    994

    1216

    1312

    1273

    779

    778

    s14

    120

    121

    M047_0.6

    M169_0.6

    M274_0.6

    M325_0.6

    1354

    78

    800

    17

    1186

    M331_0.6

    1241

    M143_0.6

    1364

    1385

    M016_0.6

    s61
    Assembly1
    rna:5:1~73 1078,1220,1358~1359,1422~1424,
    1484

    rna:6:1~3 1179,1484~1485,1563
    14947 9hl9:L1
    (2.5Å)

    1674 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF02543 Leishmania
    major
    strain
    Friedlin

    347515
    40980996 Assembly1
    rna:L2:2~1526 38~41,69,92~93,312~313,321,328
    ,341,343~350,460~464,668~669,6
    74,676~682,684~685,747~749,762
    ,818~819,826~828,856~859,869~8
    70,881~882,911~912,916,920,922
    ~927,929~930,932~933,935~938,9
    41~943,947,951,959,964~967,969
    ,972,975~976,988~991,1006~1013
    ,1018,1044~1046,1098~1099,1105
    ~1107,1109,1173,1181~1182,1185
    ~1193,1207~1209,1263~1267,1364
    ~1370,1372~1373,1526,1533~1544
    ,1547,1581~1601,1611,1613,1619
    ,1626~1630,1632~1635,1649~1651
    ,1654,1656~1658,1661,1666~1667
    ,1682,1712,1730,1755~1756,1758
    ,1770~1774,1776~1781

    rna:L3:5~216 876,889~890,906~908,1638~1639,
    1710,1737,1740~1742,1746~1750,
    1767~1768

    rna:L4:1~184 222~230,457~458,461,477,651,12
    50,1270,1288~1289,1504,1544~15
    45

    rna:L5:2~135 1564,1568~1569
    rna:L6:3~73 491~492,644
    rna:L7:1~169 3~21,57,142,273~274,369~377,37
    9~382,385~386,389,391,408,410,
    439,445~459,688~689,729,1483~1
    484,1488,1509~1510,1531,1636,1
    647,1734~1735,1772~1775

    rna:L8:5~124 1047~1049,1052,1103,1105~1107,
    1213,1228,1258,1265

    rna:S1:1~2203 897~899
    14948 9hl9:L2
    (2.5Å)

    1153 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF02543 Leishmania
    major
    strain
    Friedlin

    347515
    40980996 Assembly1
    rna:L1:3~1781 2~26,29,31~34,37~42,47~50,54~6
    3,73~75,91~92,378~385,388,391~
    393,412~416,421,468~470,570,59
    2~593,599~609,612~627,630~632,
    643,648,654,656~661,666,768~76
    9,1026,1028,1038,1043,1045,105
    9~1065,1068~1070,1072~1073,114
    6~1148,1155~1156,1190~1191,120
    8,1212~1214,1216~1226,1237~124
    1,1247,1249~1253,1255,1263~126
    6,1270,1272~1273,1293~1296,129
    8,1301~1303,1305~1309,1322~132
    5,1376~1377,1388,1395~1396,141
    6~1419,1421,1437~1438

    rna:L3:5~216 4,43,132~133,347,977~978
    rna:L4:1~184 44~45,52~53,78~80,360~363,587~
    588,590,631,1329~1332,1338~134
    0,1346~1348,1350,1371,1433~143
    5,1437,1445

    rna:L5:2~135 68~69,124~127,355~357,595,635~
    636,1429~1430,1511~1512

    rna:L6:3~73 1441~1443,1450,1452
    rna:L7:1~169 9,15,632~633,784,1011~1012,143
    2~1433

    rna:S3:2~76 498,511~513,1046~1048,1257~125
    8,1409

    rna:S4:1~76 456~458,480~482,1191~1192,1231
    ~1232

    rna:S1:1~2203 102,119~120,437,442,452~453,50
    1~502,504~505,508~509,536~539,
    548~550
    14949 9hl9:L3
    (2.5Å)

    181 N/A N/A N/A Leishmania
    major
    strain
    Friedlin

    347515
    40980996 Assembly1
    rna:L1:3~1781 32~33,38,72~74,122~124,152~153
    ,170~171,202~205,216

    rna:L2:2~1526 22,25,46,182,211,213
    rna:L4:1~184 57,59~62
    14950 9hl9:L4
    (2.5Å)

    184 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS0002915759 RF02543 Leishmania
    major
    strain
    Friedlin

    347515
    40980996 Assembly1
    rna:L1:3~1781 7~17,20,105~106,133,143~144,17
    0

    rna:L2:2~1526 41~43,52~54,57~60,80~82,84,89~
    94,107~111,116~118,121,133~135
    ,157~160,170,172,174

    rna:L3:5~216 97~99
    rna:L5:2~135 3,21~22,24,27,85,87~88,112~113
    ,179~181

    rna:L6:3~73 1,23
    14951 9hl9:L5
    (2.5Å)

    119 N/A N/A N/A Leishmania
    major
    strain
    Friedlin

    347515
    40980996 Assembly1
    rna:L1:3~1781 10,127~130
    rna:L2:2~1526 18,20~21,67~69,91~93,107,113
    rna:L4:1~184 2~7,40~41,102~103,106,135
    14952 9hl9:L6
    (2.5Å)

    71 N/A N/A N/A Leishmania
    major
    strain
    Friedlin

    347515
    40980996 Assembly1
    rna:L1:3~1781 65~66
    rna:L2:2~1526 5~9,13~14
    rna:L4:1~184 3~4
    14953 9hl9:L7
    (2.5Å)

    165 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF00002 Leishmania
    major
    strain
    Friedlin

    347515
    40980996 Assembly1
    rna:L1:3~1781 4~21,23~37,40~41,53~54,94,103,
    105,108~109,114,126,139~140,15
    0~156,158~163,165~169

    rna:L2:2~1526 1~3,112,125,164,166,168
    rna:L4:1~184 9~10
    14954 9hl9:L8
    (2.5Å)

    120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS0002915758 RF00001 Leishmania
    major
    strain
    Friedlin

    347515
    40980996 Assembly1
    rna:L1:3~1781 81~84,88,92,102,104~107
    14955 9hl9:S1
    (2.5Å)

    1833 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF01960 Leishmania
    major
    strain
    Friedlin

    347515
    40980996 Assembly1
    rna:L1:3~1781 677,1218~1220
    rna:L2:2~1526 364,1160,1242,1475,2064~2066,2
    075~2077,2086~2087,2149~2150,2
    159~2162,2183

    rna:S3:2~76 1248,1543,1863~1864,1995~1997,
    2057

    rna:S5:1~9 1151,1502,2057~2058,2159,2164
    14956 9hl9:S3
    (2.5Å)

    73 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Leishmania
    major
    strain
    Friedlin

    347515
    40980996 Assembly1
    rna:L2:2~1526 12~13,24~25,74~76
    rna:S5:1~9 34~37
    rna:S1:1~2203 30~32,34,38~41
    14957 9hl9:S4
    (2.5Å)

    74 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS000080E264 RF00005 Leishmania
    major
    strain
    Friedlin

    347515
    40980996 Assembly1
    rna:L2:2~1526 3~4,71~72,75~76
    14958 9hlz:AA
    (3.2Å)

    2709 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF02541
    RF02540
    RF02543
    RF02540
    RF02540
    RF02543
    RF02543
    Saccharomyces
    cerevisiae
    W303

    580240
    41339860 Assembly1
    rna:t:1~76 2660~2662,2688,2690,2698
    rna:r:9~1649 1656~1657,1745,1754~1755,1813,
    1816,1819~1820,1846~1849,1858~
    1861
    14959 9hlz:r
    (3.2Å)

    1495 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF00177
    RF01959
    RF02542
    RF01960
    Saccharomyces
    cerevisiae
    W303

    580240
    41339860 Assembly1
    rna:t:1~76 1031,1261~1262,1406~1408
    rna:AA:8~3293 767,849,1475~1476,1486~1487,14
    96~1497,1575~1577,1586~1588,16
    09
    14960 9hlz:t
    (3.2Å)

    76 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Saccharomyces
    cerevisiae
    W303

    580240
    41339860 Assembly1
    rna:AA:8~3293 74~76
    rna:r:9~1649 30~31,34,40~41
    14961 9hm0:AA
    (3.0Å)

    2708 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF02541
    RF02540
    RF02543
    RF02540
    RF02540
    RF02543
    RF02543
    Saccharomyces
    cerevisiae
    W303

    580240
    41339860 Assembly1
    rna:t:1~76 2010,2012,2660~2662,2688~2690,
    2698

    rna:r:9~1649 1639,1656~1657,1756,1813,1815,
    1819~1820,1847~1848,1859~1861
    14962 9hm0:r
    (3.0Å)

    1495 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF00177
    RF01959
    RF02542
    RF01960
    Saccharomyces
    cerevisiae
    W303

    580240
    41339860 Assembly1
    rna:t:1~76 854~855,1031,1406~1408
    rna:AA:8~3293 767,1475~1476,1486,1496~1497,1
    575~1576,1586~1587,1609
    14963 9hm0:t
    (3.0Å)

    76 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Saccharomyces
    cerevisiae
    W303

    580240
    41339860 Assembly1
    rna:AA:8~3293 17,75~76
    rna:r:9~1649 32,34~35,38~42
    14964 9hm4:B
    (3.2Å)

    47 N/A N/A N/A synthetic
    construct

    32630
    N/A Assembly1
    rna:C:7~40 37~65
    14965 9hm4:C
    (3.2Å)

    34 N/A N/A N/A synthetic
    construct

    32630
    N/A Assembly1
    rna:B:19~65 7~14,16~35
    14966 9hm5:B
    (3.3Å)

    47 N/A N/A N/A synthetic
    construct

    32630
    N/A Assembly1
    rna:C:7~40 37~65
    14967 9hm5:C
    (3.3Å)

    34 N/A N/A N/A synthetic
    construct

    32630
    N/A Assembly1
    rna:B:19~65 7~35
    14968 9hm6:B
    (4.0Å)

    47 N/A N/A N/A synthetic
    construct

    32630
    N/A Assembly1
    rna:C:8~40 37~64
    14969 9hm6:C
    (4.0Å)

    33 N/A N/A N/A synthetic
    construct

    32630
    N/A Assembly1
    rna:B:18~64 8~35
    14970 9hmw:3
    (2.25Å)

    162 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF00002 Arabidopsis
    thaliana

    3702
    41678627 Assembly1
    rna:A:1~3385 3~4,7~26,28~37,39~41,44~45,57~
    58,108,113,115,117~119,142~163
    14971 9hmw:A
    (2.25Å)

    3149 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF02540
    RF02541
    RF02543
    Arabidopsis
    thaliana

    3702
    41678627
    555

    M239_0.6
    Assembly1
    rna:3:3~164 1~21,57,141,327~334,336~339,34
    2~343,346,348,365~366,401~416,
    640,668~669,704,1403~1404,1428
    ,1450,1500,1539,1566,1585~1586
    ,1832~1834,2384,2584,2993~2995
    ,3140

    rna:i2:1~76 2254,2618~2620,2677,2818~2819,
    2970

    rna:C3:1~119 1007~1010,1012,1062~1066,1165,
    1180,1207,1213

    rna:h1:1~1804 855~856,2124,2253~2257,2260~22
    61,2288~2290,2300~2302

    rna:W2:1~76 2209,2234,2451,2453,2763~2764,
    2792~2793
    14972 9hmw:B1
    (2.25Å)

    12 N/A N/A N/A Arabidopsis
    thaliana

    3702
    41678627 Assembly1
    rna:i2:1~76 25~27
    rna:h1:1~1804 18~19,21~26,29
    rna:W2:1~76 22~24
    14973 9hmw:C3
    (2.25Å)

    119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF00001 Arabidopsis
    thaliana

    3702
    41678627 Assembly1
    rna:A:1~3385 77~80,84,88,98,100~103
    14974 9hmw:W2
    (2.25Å)

    76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS00001504D0 RF00005 Arabidopsis
    thaliana

    3702
    41678627 Assembly1
    rna:A:1~3385 3,17,19,71,75~76
    rna:h1:1~1804 30~31,34,38,40~42
    rna:B1:18~29 34~37
    14975 9hmw:h1
    (2.25Å)

    1612 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF01960
    RF02542
    RF01959
    RF00177
    Arabidopsis
    thaliana

    3702
    41678627
    516
    Assembly1
    rna:A:1~3385 630,972~974,1646~1649,1657~165
    9,1750~1751,1761~1763,1784

    rna:i2:1~76 579,1275,1760
    rna:B1:18~29 905,1151,1636,1639~1640,1759~1
    760,1765

    rna:W2:1~76 1002,1192,1465~1466,1577~1579,
    1639
    14976 9hmw:i2
    (2.25Å)

    76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS00001504D0 RF00005 Arabidopsis
    thaliana

    3702
    41678627 Assembly1
    rna:A:1~3385 37~38,56,74~76
    rna:h1:1~1804 34~37
    rna:B1:18~29 34~37
    14977 9hp8:B
    (3.7Å)

    29 N/A N/A N/A synthetic
    construct

    32630
    41702403 Assembly1
    rna:C:4~72 0~18
    14978 9hp8:C
    (3.7Å)

    69 N/A N/A RF02348 synthetic
    construct

    32630
    41702403 Assembly1
    rna:B:-10~18 4~16,18~24
    14979 9hp9:B
    (3.39Å)

    29 N/A N/A N/A synthetic
    construct

    32630
    41702403 Assembly1
    rna:C:4~72 0~18
    14980 9hp9:C
    (3.39Å)

    69 N/A N/A RF02348 synthetic
    construct

    32630
    41702403 Assembly1
    rna:B:-10~18 4~16,18~24
    14981 9hqv:SA
    (2.52Å)

    91 N/A N/A N/A Toxoplasma
    gondii

    5811
    39827269 Assembly1
    rna:SB:422~449 80~83,86
    rna:SD:1~47 65~66
    rna:SE:1~73 22~24,28~29,62~64,67~78,81~83,
    85

    rna:SF:1~120 1~4,10~12,14~21,23~29,52,54,57
    ~58

    rna:SI:1~53 8~10
    rna:SK:1~120 7~14
    14982 9hqv:SB
    (2.52Å)

    28 N/A N/A N/A Toxoplasma
    gondii

    5811
    39827269 Assembly1
    rna:SA:1~91 422~425
    rna:SC:1~23 435~436,439~444
    rna:SD:1~47 430~435,438~440
    rna:SE:1~73 424,428,432
    14983 9hqv:SC
    (2.52Å)

    23 N/A N/A N/A Toxoplasma
    gondii

    5811
    39827269 Assembly1
    rna:SB:422~449 1~5,7
    rna:SD:1~47 7~10,14~18
    rna:SK:1~120 11,13
    14984 9hqv:SD
    (2.52Å)

    47 N/A N/A N/A Toxoplasma
    gondii

    5811
    39827269 Assembly1
    rna:SA:1~91 36~37
    rna:SB:422~449 14~16,39~43
    rna:SC:1~23 1~5,7~9,11~14
    rna:SF:1~120 6,23~24,32~34
    rna:SJ:1~93 4~5
    14985 9hqv:SE
    (2.52Å)

    73 N/A N/A N/A Toxoplasma
    gondii

    5811
    39827269 Assembly1
    rna:SA:1~91 11~12,14~21,23~26,38~40,44~45,
    55~60

    rna:SB:422~449 13~14,38
    14986 9hqv:SF
    (2.52Å)

    120 N/A N/A N/A Toxoplasma
    gondii

    5811
    39827269 Assembly1
    rna:SA:1~91 2,4~5,11~13,15,27,29,48~49,74~
    82,85~87,99~100

    rna:SD:1~47 16~17,83,91,111
    rna:SE:1~73 74~75
    rna:SJ:1~93 97,102,104~110,112~115
    rna:SK:1~120 49,90,94~96,98~103,112~113
    14987 9hqv:SG
    (2.52Å)

    26 N/A N/A N/A Toxoplasma
    gondii

    5811
    39827269 Assembly1
    rna:SI:1~53 10,19~26
    rna:SJ:1~93 1~9,11~17,22~23
    14988 9hqv:SH
    (2.52Å)

    25 N/A N/A N/A Toxoplasma
    gondii

    5811
    39827269 Assembly1
    rna:SI:1~53 16~19
    14989 9hqv:SI
    (2.52Å)

    53 N/A N/A N/A Toxoplasma
    gondii

    5811
    39827269 Assembly1
    rna:SA:1~91 52~53
    rna:SG:1~26 22,27~35,39~40
    rna:SH:1~25 19~22,24,26
    rna:SJ:1~93 11~13,33~34,36,39,42,46~47,49
    14990 9hqv:SJ
    (2.52Å)

    93 N/A N/A N/A Toxoplasma
    gondii

    5811
    39827269 Assembly1
    rna:SF:1~120 19,21~22,24~25,27~31,81~82,85~
    86

    rna:SG:1~26 2~11,13~16,43~44
    rna:SI:1~53 1,43,52~53,63~64,71,84~85,92~9
    3

    rna:SK:1~120 22~25,86~90
    rna:SU:1~54 32~35,46~48,56,59~61,78~81
    14991 9hqv:SK
    (2.52Å)

    114 N/A N/A N/A Toxoplasma
    gondii

    5811
    39827269 Assembly1
    rna:SA:1~91 11,43~50
    rna:SC:1~23 24,33,38
    rna:SF:1~120 4~10,43,46~47
    rna:SI:1~53 48~49
    rna:SJ:1~93 2~6
    rna:SL:1~28 98,113
    rna:SM:1~75 75~86,89~91,101,112~116,118~12
    0

    rna:SP:1~37 77,108~109
    rna:SQ:1~56 67~76,101~102,105~106,108
    rna:SR:1~34 39,51~55,57~60,63~64
    rna:SU:1~54 15~16,41,54~57
    14992 9hqv:SL
    (2.52Å)

    28 N/A N/A N/A Toxoplasma
    gondii

    5811
    39827269 Assembly1
    rna:SK:1~120 8~9,20
    rna:SM:1~75 6~25
    14993 9hqv:SM
    (2.52Å)

    75 N/A N/A N/A Toxoplasma
    gondii

    5811
    39827269 Assembly1
    rna:SK:1~120 14,16,27,29~38,63~71
    rna:SL:1~28 4,7~22,24~26,28~29
    rna:SN:1~29 73~74
    rna:SP:1~37 42,44,58~59,71~72,74
    rna:SQ:1~56 38~39,68~69,72~73
    rna:TP:22~42 64~65
    14994 9hqv:SN
    (2.52Å)

    24 N/A N/A N/A Toxoplasma
    gondii

    5811
    39827269 Assembly1
    rna:SM:1~75 2,4~5
    rna:SP:1~37 2,4,6~10
    14995 9hqv:SO
    (2.52Å)

    16 N/A N/A N/A Toxoplasma
    gondii

    5811
    39827269 Assembly1
    rna:SP:1~37 7~9
    rna:SQ:1~56 9~10
    14996 9hqv:SP
    (2.52Å)

    33 N/A N/A N/A Toxoplasma
    gondii

    5811
    39827269 Assembly1
    rna:SK:1~120 21,30,32~33
    rna:SM:1~75 11,16,18~20,37
    rna:SN:1~29 6~11,17~18
    rna:SO:1~16 1~4
    rna:SQ:1~56 1~2,16,18~23,26~30,33
    14997 9hqv:SQ
    (2.52Å)

    56 N/A N/A N/A Toxoplasma
    gondii

    5811
    39827269 Assembly1
    rna:SK:1~120 12,16~23,28~29,37,39~45,53~56
    rna:SM:1~75 1,13~16,43~44
    rna:SO:1~16 32~33,48~49
    rna:SP:1~37 2~6,8~9,11~14,31~32,39~40,50
    rna:TP:22~42 17~19
    14998 9hqv:SR
    (2.52Å)

    34 N/A N/A N/A Toxoplasma
    gondii

    5811
    39827269 Assembly1
    rna:SK:1~120 3~6,8~12,14~15,17~18,32
    rna:SU:1~54 13,18,20~32,34
    14999 9hqv:SS
    (2.52Å)

    12 N/A N/A N/A Toxoplasma
    gondii

    5811
    39827269 Assembly1
    rna:ST:1~24 3~5,7~11
    15000 9hqv:ST
    (2.52Å)

    24 N/A N/A N/A Toxoplasma
    gondii

    5811
    39827269 Assembly1
    rna:SS:1~12 12~19
    << < 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 > >>
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    Reference:
  • Chengxin Zhang, Lydia Freddolino (2024) "FURNA: a database for function annotations of RNA structures," PLOS Biology 22(7): e3002476.