SEQ2FUN

FURNA
Download all results in tab-seperated text for 16611 RNAs.
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  • Hover over Ligand to view the name of the ligand and the ligand-binding nucleotides on the RNA.

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    # PDB
    (Resolution)    		 Length EC number
    & GO term     		RNAcentral Rfam Taxon PubMed ATtRACT
    motif     		Ligand &
    binding nucleotides
    15101 9iiy:C
    (3.0Å)
    		 21 N/A URS0002F1043D N/A Homo
    sapiens
    9606    		 39814893 Assembly1
    rna:B:1~22 1~21
    15102 9iiz:B
    (3.8Å)
    		 25 N/A URS00029156CE N/A Homo
    sapiens
    9606    		 39814893 Assembly1
    rna:C:2~25 2~9,11~25
    15103 9iiz:C
    (3.8Å)
    		 24 N/A URS0002F1043F N/A Homo
    sapiens
    9606    		 39814893 Assembly1
    rna:B:1~25 2~16,18~25
    15104 9ij0:B
    (3.2Å)
    		 19 N/A URS0000400A3F N/A Homo
    sapiens
    9606    		 39814893 Assembly1
    rna:C:16~23 2~6,8~9
    15105 9ij1:B
    (3.2Å)
    		 26 N/A URS0000400A3F N/A Homo
    sapiens
    9606    		 39814893 Assembly1
    rna:C:1~21 3~23
    15106 9ij1:C
    (3.2Å)
    		 21 N/A URS0002F1043A N/A Homo
    sapiens
    9606    		 39814893 Assembly1
    rna:B:1~26 1~21
    15107 9ij2:B
    (3.9Å)
    		 22 N/A URS0002F10449 N/A Homo
    sapiens
    9606    		 39814893 Assembly1
    rna:C:1~21 3~22
    15108 9ij2:C
    (3.9Å)
    		 21 N/A URS0002F1043A N/A Homo
    sapiens
    9606    		 39814893 Assembly1
    rna:B:1~22 1~19,21
    15109 9ij3:B
    (2.6Å)
    		 26 N/A URS0000400A3F N/A Homo
    sapiens
    9606    		 39814893 Assembly1
    rna:C:1~25 2~26
    15110 9ij3:C
    (2.6Å)
    		 25 N/A URS0002F1043B N/A Homo
    sapiens
    9606    		 39814893 Assembly1
    rna:B:1~26 1~25
    15111 9ij4:B
    (2.7Å)
    		 26 N/A URS0000400A3F N/A Homo
    sapiens
    9606    		 39814893 Assembly1
    rna:C:1~25 2~26
    15112 9ij4:C
    (2.7Å)
    		 25 N/A URS0002F1043B N/A Homo
    sapiens
    9606    		 39814893 Assembly1
    rna:B:1~26 1~25
    15113 9ij5:B
    (2.8Å)
    		 26 N/A URS0000400A3F N/A Homo
    sapiens
    9606    		 39814893 Assembly1
    rna:C:1~25 2~26
    15114 9ij5:C
    (2.8Å)
    		 25 N/A URS0002F1043B N/A Homo
    sapiens
    9606    		 39814893 Assembly1
    rna:B:1~26 1~25
    15115 9ikz:I
    (3.14Å)
    		 25 N/A N/A N/A Severe
    acute
    respiratory
    syndrome
    coronavirus
    2
    2697049    		 40570837 Assembly1
    rna:J:24~50 10~15,17,19~22,24~27,30~33
    15116 9ikz:J
    (3.14Å)
    		 27 N/A N/A N/A Severe
    acute
    respiratory
    syndrome
    coronavirus
    2
    2697049    		 40570837 Assembly1
    rna:I:9~33 27~30,33~37,39~41,43~47,49~50
    15117 9imk:O
    (4.01Å)
    		 40 N/A N/A N/A Severe
    acute
    respiratory
    syndrome
    coronavirus
    2
    2697049    		 41130208 Assembly1
    rna:Q:13~58 4~40
    15118 9imk:P
    (4.01Å)
    		 40 N/A N/A N/A Severe
    acute
    respiratory
    syndrome
    coronavirus
    2
    2697049    		 41130208 Assembly1
    rna:R:13~58 4~40
    15119 9imk:Q
    (4.01Å)
    		 46 N/A N/A N/A Severe
    acute
    respiratory
    syndrome
    coronavirus
    2
    2697049    		 41130208 Assembly1
    rna:O:1~40 20~37,39~57
    15120 9imk:R
    (4.01Å)
    		 46 N/A N/A N/A Severe
    acute
    respiratory
    syndrome
    coronavirus
    2
    2697049    		 41130208 Assembly1
    rna:P:1~40 20~37,39~57
    15121 9imm:O
    (3.22Å)
    		 10 N/A N/A N/A Severe
    acute
    respiratory
    syndrome
    coronavirus
    2
    2697049    		 41130208 Assembly1
    rna:Q:132~140 4~10
    15122 9imm:P
    (3.22Å)
    		 40 N/A N/A N/A Severe
    acute
    respiratory
    syndrome
    coronavirus
    2
    2697049    		 41130208 Assembly1
    rna:R:14~58 4~40
    15123 9imm:R
    (3.22Å)
    		 45 N/A N/A N/A Severe
    acute
    respiratory
    syndrome
    coronavirus
    2
    2697049    		 41130208 Assembly1
    rna:P:1~40 20~57
    15124 9ioa:D
    (2.59Å)
    		 177 N/A N/A N/A Escherichia
    coli
    562    		 40310939 Assembly1
    rna:H:1~177 93~94
    15125 9ioa:F
    (2.59Å)
    		 177 N/A N/A N/A Escherichia
    coli
    562    		 40310939 Assembly1
    rna:B:1~177 93~94
    15126 9iob:B
    (2.62Å)
    		 177 N/A N/A N/A Escherichia
    coli
    562    		 40310939 Assembly1
    rna:F:1~177 93~94
    rna:H:1~177 67~68
    15127 9iob:D
    (2.62Å)
    		 177 N/A N/A N/A Escherichia
    coli
    562    		 40310939 Assembly1
    rna:J:1~177 67~68
    rna:L:1~177 93~94
    15128 9iob:F
    (2.62Å)
    		 177 N/A N/A N/A Escherichia
    coli
    562    		 40310939 Assembly1
    rna:J:1~177 93~94
    rna:L:1~177 67~68
    15129 9iob:H
    (2.62Å)
    		 177 N/A N/A N/A Escherichia
    coli
    562    		 40310939 Assembly1
    rna:B:1~177 67~68
    rna:D:1~177 93~94
    15130 9iob:J
    (2.62Å)
    		 177 N/A N/A N/A Escherichia
    coli
    562    		 40310939 Assembly1
    rna:B:1~177 93~94
    rna:D:1~177 67~68
    15131 9iob:L
    (2.62Å)
    		 177 N/A N/A N/A Escherichia
    coli
    562    		 40310939 Assembly1
    rna:F:1~177 67~68
    rna:H:1~177 93~94
    15132 9iot:A
    (2.7Å)
    		 2841 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02541 Escherichia
    coli
    562    		 N/A Assembly1
    rna:B:1~120 861~864,915,917~919,958,2340
    rna:a:1~1539 1700~1704,1832,1837,1848,1912~
    1913,1915~1916,1919~1920,1947~
    1950,1959~1961
    15133 9iot:B
    (2.7Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00001 Escherichia
    coli
    562    		 N/A Assembly1
    rna:A:1~2903 41,78~81,89,96~97,99~100
    15134 9iot:a
    (2.7Å)
    		 1534 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00177 Escherichia
    coli
    562    		 N/A Assembly1
    rna:A:1~2903 702,784,899,1407~1409,1418~142
    0,1429,1473~1475,1483~1484,149
    3~1496,1517
    15135 9is7:A
    (2.87Å)
    		 123 N/A URS0003054954 N/A Paracandidimonas
    lactea
    2895524    		 39890981 Assembly1
    rna:B:154~735 1,20,22~28,30,32,34~36,39~41,4
    3,45~47,51~56,58,60~61,66,71~7
    2,97~99,105~107,145~153
    15136 9is7:B
    (2.87Å)
    		 582 N/A URS0003054900 N/A Paracandidimonas
    lactea
    2895524    		 39890981 Assembly1
    rna:A:1~153 154,158,312~314,356~358,374,42
    7,462,467~472,474~479,525,551~
    552,578,642~644,692,694,705~70
    6,727~733,735
    15137 9j1m:A
    (2.33Å)
    		 2904 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00005E0FC6 RF02541 Mycobacterium
    tuberculosis
    variant
    bovis
    BCG
    str.
    Pasteur
    1173P2
    410289    		 40043128 Assembly1
    rna:B:1~115 990~993,1044~1048
    rna:a:8~1526 1924,1935~1936,1938~1939,2066,
    2070~2071,2080~2082,2150~2154,
    2157~2158,2185~2188,2197~2199
    rna:u:75~77 2301,2489~2491,2688~2689,2823,
    2839~2840
    15138 9j1m:B
    (2.33Å)
    		 115 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00005330B1 RF00001 Mycobacterium
    tuberculosis
    variant
    bovis
    BCG
    str.
    Pasteur
    1173P2
    410289    		 40043128 Assembly1
    rna:A:5~3132 77~80,92~96
    15139 9j1m:a
    (2.33Å)
    		 1519 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00002C0A67 RF00177 Mycobacterium
    tuberculosis
    variant
    bovis
    BCG
    str.
    Pasteur
    1173P2
    410289    		 40043128 Assembly1
    rna:A:5~3132 693,775,892,1400~1402,1411~141
    3,1422,1467~1468,1476~1477,148
    5~1489,1510
    15140 9j3r:A
    (4.72Å)
    		 452 N/A URS0000D65D6E RF03087 Enterococcus
    faecalis
    JH1
    565648    		 40080543 Assembly1
    rna:B:12~571 42~44,46,64~65,167,223~225,262
    ~264
    rna:D:12~571 230~232,287~290,318~320,356,42
    0~424
    15141 9j3r:B
    (4.72Å)
    		 452 N/A URS0000D65D6E RF03087 Enterococcus
    faecalis
    JH1
    565648    		 40080543 Assembly1
    rna:A:12~571 230~232,287~290,318~320,356,42
    0~424
    rna:C:12~571 42~46,64~65,167,223~225,262~26
    4
    15142 9j3r:C
    (4.72Å)
    		 452 N/A URS0000D65D6E RF03087 Enterococcus
    faecalis
    JH1
    565648    		 40080543 Assembly1
    rna:B:12~571 230~232,287~290,318~320,356,42
    0~424
    rna:D:12~571 42~44,46,64~65,167,223~225,262
    ~264
    15143 9j3r:D
    (4.72Å)
    		 452 N/A URS0000D65D6E RF03087 Enterococcus
    faecalis
    JH1
    565648    		 40080543 Assembly1
    rna:A:12~571 42~46,64~65,167,223~225,262~26
    4
    rna:C:12~571 230~232,287~290,318~320,356,42
    0~424
    15144 9j3t:A
    (3.8Å)
    		 519 N/A URS0000D65D6E RF03087 Enterococcus
    faecalis
    1351    		 40080543 Assembly1
    rna:B:8~575 42~44,46,64~65,167,223~225,262
    ~264
    rna:D:8~575 230~232,287~290,318~320,356,42
    0~424
    rna:E:8~575 485~489,491~492
    rna:F:8~575 186,415~417,443,502~503,535,55
    4~557
    15145 9j3t:B
    (3.8Å)
    		 519 N/A URS0000D65D6E RF03087 Enterococcus
    faecalis
    1351    		 40080543 Assembly1
    rna:A:8~575 230~232,287~290,318~320,356,42
    0~424
    rna:C:8~575 42~46,64~65,167,223~225,262~26
    4
    rna:F:8~575 485~489,491~492
    rna:G:8~575 186,415~417,443,502~503,535,55
    4~557
    15146 9j3t:C
    (3.8Å)
    		 519 N/A URS0000D65D6E RF03087 Enterococcus
    faecalis
    1351    		 40080543 Assembly1
    rna:B:8~575 230~232,287~290,318~320,356,42
    0~424
    rna:D:8~575 42~44,46,64~65,167,223~225,262
    ~264
    rna:G:8~575 485~489,491~492
    rna:H:8~575 186,415~417,443,502~503,535,55
    4~557
    15147 9j3t:D
    (3.8Å)
    		 519 N/A URS0000D65D6E RF03087 Enterococcus
    faecalis
    1351    		 40080543 Assembly1
    rna:A:8~575 42~46,64~65,167,223~225,262~26
    4
    rna:C:8~575 230~232,287~290,318~320,356,42
    0~424
    rna:E:8~575 186,415~417,443,502~503,535,55
    4~557
    rna:H:8~575 485~489,491~492
    15148 9j3t:E
    (3.8Å)
    		 519 N/A URS0000D65D6E RF03087 Enterococcus
    faecalis
    1351    		 40080543 Assembly1
    rna:A:8~575 485~489,491~492
    rna:D:8~575 186,415~417,443,502~503,535,55
    4~557
    rna:F:8~575 230~232,287~290,318~320,356,42
    0~424
    rna:H:8~575 42~46,64~65,167,223~225,262~26
    4
    15149 9j3t:F
    (3.8Å)
    		 519 N/A URS0000D65D6E RF03087 Enterococcus
    faecalis
    1351    		 40080543 Assembly1
    rna:B:8~575 485~489,491~492
    rna:A:8~575 186,415~417,443,502~503,535,55
    4~557
    rna:E:8~575 42~44,46,64~65,167,223~225,262
    ~264
    rna:G:8~575 230~232,287~290,318~320,356,42
    0~424
    15150 9j3t:G
    (3.8Å)
    		 519 N/A URS0000D65D6E RF03087 Enterococcus
    faecalis
    1351    		 40080543 Assembly1
    rna:B:8~575 186,415~417,443,502~503,535,55
    4~557
    rna:C:8~575 485~489,491~492
    rna:F:8~575 42~46,64~65,167,223~225,262~26
    4
    rna:H:8~575 230~232,287~290,318~320,356,42
    0~424
    15151 9j3t:H
    (3.8Å)
    		 519 N/A URS0000D65D6E RF03087 Enterococcus
    faecalis
    1351    		 40080543 Assembly1
    rna:D:8~575 485~489,491~492
    rna:C:8~575 186,415~417,443,502~503,535,55
    4~557
    rna:E:8~575 230~232,287~290,318~320,356,42
    0~424
    rna:G:8~575 42~44,46,64~65,167,223~225,262
    ~264
    15152 9j6p:A
    (2.49Å)
    		 22 N/A URS000305490A N/A synthetic
    construct
    32630    		 39641381 Assembly1
    rna:B:3~23 3~17,20~23
    15153 9j6p:B
    (2.49Å)
    		 21 N/A URS000305490A N/A synthetic
    construct
    32630    		 39641381 Assembly1
    rna:A:2~23 3~17,20~23
    15154 9j6y:A
    (3.25Å)
    		 496 N/A URS0000D6BA83 RF03087 Ligilactobacillus
    salivarius
    DSM
    20555
    =
    ATCC
    11741
    1423799    		 40080543 Assembly1
    rna:C:16~537 42~45,64~66,166~167,225,246~24
    8,250
    rna:F:16~537 187~188,382,407~408,470,499~50
    0,525~526
    rna:B:16~537 223,272~274,304~307,342,386,38
    8~389
    rna:D:16~537 453~458
    15155 9j6y:B
    (3.25Å)
    		 496 N/A URS0000D6BA83 RF03087 Ligilactobacillus
    salivarius
    DSM
    20555
    =
    ATCC
    11741
    1423799    		 40080543 Assembly1
    rna:C:16~537 223,272~274,304~307,342,386,38
    8~389
    rna:E:16~537 453~458
    rna:A:16~537 42~45,65~66,166~167,225,246~24
    8,250
    rna:D:16~537 187~188,382,407~408,470,499~50
    0,525~526
    15156 9j6y:C
    (3.25Å)
    		 496 N/A URS0000D6BA83 RF03087 Ligilactobacillus
    salivarius
    DSM
    20555
    =
    ATCC
    11741
    1423799    		 40080543 Assembly1
    rna:F:16~537 453~458
    rna:B:16~537 42~45,64~66,166~167,225,246~24
    8,250
    rna:E:16~537 187~188,382,407~408,470,499~50
    0,525~526
    rna:A:16~537 223,272~274,304~307,342,386~38
    9
    15157 9j6y:D
    (3.25Å)
    		 496 N/A URS0000D6BA83 RF03087 Ligilactobacillus
    salivarius
    DSM
    20555
    =
    ATCC
    11741
    1423799    		 40080543 Assembly1
    rna:F:16~537 223,272~274,304~307,342,386~38
    9
    rna:B:16~537 187~188,382,407~408,470,499~50
    0,525~526
    rna:E:16~537 42~45,65~66,166~167,225,246~24
    8,250
    rna:A:16~537 452~458
    15158 9j6y:E
    (3.25Å)
    		 496 N/A URS0000D6BA83 RF03087 Ligilactobacillus
    salivarius
    DSM
    20555
    =
    ATCC
    11741
    1423799    		 40080543 Assembly1
    rna:C:16~537 187~188,382,407~408,470,499~50
    0,525~526
    rna:F:16~537 42~45,64~66,166~168,225,246~24
    8,250
    rna:B:16~537 452~458
    rna:D:16~537 223,272~274,304~307,342,386~38
    9
    15159 9j6y:F
    (3.25Å)
    		 496 N/A URS0000D6BA83 RF03087 Ligilactobacillus
    salivarius
    DSM
    20555
    =
    ATCC
    11741
    1423799    		 40080543 Assembly1
    rna:C:16~537 452~458
    rna:E:16~537 223,272~274,304~308,342,386,38
    8~389
    rna:A:16~537 187~188,382,407~408,470,499~50
    0,525~526
    rna:D:16~537 42~45,64~66,166~167,225,246~24
    8,250
    15160 9j9e:A
    (2.97Å)
    		 53 N/A N/A N/A synthetic
    construct
    32630    		 N/A Assembly1
    rna:B:28~66 10~14,16~20,22~26,28~32,34~38,
    40~44,46~48
    15161 9j9e:B
    (2.97Å)
    		 39 N/A N/A N/A synthetic
    construct
    32630    		 N/A Assembly1
    rna:A:2~54 28~30,32~36,38~42,44~48,50~54,
    56~60,62~66
    15162 9j9h:A
    (2.45Å)
    		 3203 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02543 Plasmodium
    falciparum
    3D7
    36329    		 40480224 Assembly1
    rna:AQ:1~74 2504,2528~2529,3103,3152~3153
    rna:B:2~119 1118~1119,1121,1175,1178,1284,
    1299,1325,1331
    rna:C:2~158 9~24,59,152,338~345,347~350,35
    3~354,357,359,376~377,408,414~
    418,420~429,734,772,1542~1543,
    1568,1590,1728,2092~2093,2098~
    2099,2679,3568~3570
    rna:j:1~2090 965,2186,2203,2418,2484,2499,2
    501,2548~2549,2551~2552,2555~2
    556,2583~2585,2595~2596
    15163 9j9h:AQ
    (2.45Å)
    		 74 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000035398D RF00005 Plasmodium
    falciparum
    3D7
    36329    		 40480224 Assembly1
    rna:A:9~3786 3~4,69,74
    15164 9j9h:B
    (2.45Å)
    		 118 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00001 Plasmodium
    falciparum
    3D7
    36329    		 40480224 Assembly1
    rna:A:9~3786 77~79,84,88,98,100~102
    15165 9j9h:C
    (2.45Å)
    		 152 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00002 Plasmodium
    falciparum
    3D7
    36329    		 40480224 Assembly1
    rna:A:9~3786 2~5,7~17,19~26,28~41,44~45,57~
    58,107,112~113,116~117,123,138
    ~140,143~144,146~156
    15166 9j9h:j
    (2.45Å)
    		 1644 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF01960 Plasmodium
    falciparum
    3D7
    36329    		 40480224 Assembly1
    rna:A:9~3786 326,635~636,982,1040~1041,1224
    ,1941~1943,1952~1954,1964,2038
    ~2039,2047~2050,2072
    15167 9j9i:A
    (2.46Å)
    		 3203 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02543 Plasmodium
    falciparum
    3D7
    36329    		 40480224 Assembly1
    rna:j:1~2090 965,2418,2484,2499,2501,2548~2
    549,2552,2555~2556,2583,2595~2
    596
    rna:B:2~119 1118~1119,1175,1177~1178,1284,
    1299,1325,1331
    rna:C:2~158 9~24,59,338~345,347~350,353~35
    4,357,359,376~377,414~429,772,
    1542~1543,1546,1567~1568,1590,
    1728,2092~2093,2098~2099,2679,
    3568~3570
    rna:AQ:1~74 2503~2504,2528~2529,3103,3152~
    3153
    15168 9j9i:AQ
    (2.46Å)
    		 74 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000035398D RF00005 Plasmodium
    falciparum
    3D7
    36329    		 40480224 Assembly1
    rna:A:9~3786 3~4,69,74
    15169 9j9i:B
    (2.46Å)
    		 118 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00001 Plasmodium
    falciparum
    3D7
    36329    		 40480224 Assembly1
    rna:A:9~3786 77~79,84,88,98,100~101
    15170 9j9i:C
    (2.46Å)
    		 152 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00002 Plasmodium
    falciparum
    3D7
    36329    		 40480224 Assembly1
    rna:A:9~3786 3~5,7~17,19~26,28~41,44~45,58,
    107,109,112,116~117,123,138~14
    0,143,146~156
    15171 9j9i:j
    (2.46Å)
    		 1644 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF01960 Plasmodium
    falciparum
    3D7
    36329    		 40480224 Assembly1
    rna:A:9~3786 326,635~636,982,1040~1041,1224
    ,1941~1942,1952,1954,1964,2038
    ~2039,2047~2050,2072
    15172 9jgm:B
    (3.73Å)
    		 105 N/A N/A N/A Escherichia
    coli
    K-12
    83333    		 40252020 Assembly2
    rna:A-2:1~105 20,23,67~69,79~83
    15173 9jgm:C
    (3.73Å)
    		 105 N/A N/A N/A Escherichia
    coli
    K-12
    83333    		 40252020 Assembly1
    rna:D:1~105 19,22,41~42,56~58,68~69,80~83
    15174 9jgm:D
    (3.73Å)
    		 105 N/A N/A N/A Escherichia
    coli
    K-12
    83333    		 40252020 Assembly1
    rna:C:1~105 12~13,22~23,41~42,57~58,80~83
    15175 9jkd:B
    (2.34Å)
    		 13 N/A URS000340222B N/A synthetic
    construct
    32630    		 40249801 Assembly1
    rna:C:893~901 801~809
    15176 9jm0:E
    (2.7Å)
    		 58 N/A URS0002915764 N/A Escherichia
    coli
    562    		 39395169 Assembly1
    rna:F:0~7 10~13
    15177 9jm0:H
    (2.7Å)
    		 58 N/A URS0002915764 N/A Escherichia
    coli
    562    		 39395169 Assembly1
    rna:I:0~7 10~14
    15178 9jm0:N
    (2.7Å)
    		 58 N/A URS0002915764 N/A Escherichia
    coli
    562    		 39395169 Assembly1
    rna:O:0~7 8,10,13
    15179 9jm0:R
    (2.7Å)
    		 58 N/A URS0002915764 N/A Escherichia
    coli
    562    		 39395169 Assembly1
    rna:S:0~7 8~11
    15180 9jmk:A
    (4.0Å)
    		 2390 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02541 Escherichia
    coli
    K-12
    83333    		 41296849 Assembly1
    rna:B:1~119 861~864,915,917~918,958
    15181 9jmk:B
    (4.0Å)
    		 119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00001 Escherichia
    coli
    K-12
    83333    		 41296849 Assembly1
    rna:A:1~2903 41,78~80,89,99~100
    15182 9jpm:A
    (2.43Å)
    		 1512 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00177
    RF01959
    RF02542
    RF01960    		 Escherichia
    coli
    562    		 N/A Assembly1
    rna:a:1~2903 702,784,899,1407~1409,1418,142
    9,1473~1475,1483~1484,1494~149
    6,1517
    rna:X:14~24 693,789,926,1397,1400~1402,149
    2~1493,1498
    rna:Z:1~77 790,1229~1230,1338~1340,1400
    rna:V:1~76 530,1054,1493
    15183 9jpm:V
    (2.43Å)
    		 73 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Homo
    sapiens
    9606    		 N/A Assembly1
    rna:A:1~1534 34~37
    rna:a:1~2903 19,37~38,52~53,56,63,74~76
    rna:X:14~24 34~37
    15184 9jpm:X
    (2.43Å)
    		 11 N/A N/A N/A Escherichia
    coli
    562    		 N/A Assembly1
    rna:A:1~1534 14~15,17~21,24
    rna:Z:1~77 17~19
    rna:V:1~76 20~22
    15185 9jpm:Z
    (2.43Å)
    		 77 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Escherichia
    coli
    BW25113
    679895    		 N/A Assembly1
    rna:A:1~1534 31~33,35,39,41~42
    rna:a:1~2903 11~13,25~26,75~77
    rna:X:14~24 35~38
    15186 9jpm:a
    (2.43Å)
    		 2761 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02540
    RF02541
    RF02543
    RF00002    		 Escherichia
    coli
    562    		 N/A Assembly1
    rna:A:1~1534 1700~1704,1832,1836~1837,1846,
    1848,1912~1916,1919~1920,1947~
    1948,1959~1961
    rna:b:1~119 861~863,915,917~919,958,2340
    rna:Z:1~77 1907~1909,1922~1923,2251~2253,
    2450~2451,2602
    rna:V:1~76 896,1913,2469~2470,2482~2483,2
    506~2507,2553~2555,2583~2584,2
    602
    15187 9jpm:b
    (2.43Å)
    		 119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00001 Escherichia
    coli
    562    		 N/A Assembly1
    rna:a:1~2903 41,78~81,89,96~97,99~100
    15188 9jpo:A
    (3.18Å)
    		 1512 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00177
    RF01959
    RF02542
    RF01960    		 Escherichia
    coli
    562    		 N/A Assembly1
    rna:a:1~2903 702,784,899,1407~1409,1418,142
    9,1473~1474,1483~1484,1494~149
    6,1517
    rna:X:14~24 693,926,1397,1400~1402,1493,14
    98
    rna:Z:1~77 790,966,1229,1338~1340,1400
    rna:V:1~76 530~531,1054,1493
    15189 9jpo:V
    (3.18Å)
    		 73 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Homo
    sapiens
    9606    		 N/A Assembly1
    rna:A:1~1534 34~37
    rna:a:1~2903 19,37~38,52~53,56,63,74~76
    rna:X:14~24 34~37
    15190 9jpo:X
    (3.18Å)
    		 11 N/A N/A N/A Escherichia
    coli
    562    		 N/A Assembly1
    rna:A:1~1534 14,17~20,23~24
    rna:Z:1~77 17~19
    rna:V:1~76 20~22
    15191 9jpo:Z
    (3.18Å)
    		 77 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Escherichia
    coli
    BW25113
    679895    		 N/A Assembly1
    rna:A:1~1534 31~33,35,39,41~42
    rna:a:1~2903 11~13,25~26,75~77
    rna:X:14~24 35~38
    15192 9jpo:a
    (3.18Å)
    		 2761 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02540
    RF02541
    RF02543
    RF00002    		 Escherichia
    coli
    562    		 N/A Assembly1
    rna:A:1~1534 1701~1704,1837,1846,1848,1912~
    1916,1919~1920,1947~1948,1959~
    1961
    rna:b:1~119 861~864,915,917~919,958,2340
    rna:Z:1~77 1907~1909,1922~1923,2251~2253,
    2450~2451,2602
    rna:V:1~76 896,1913,2469~2470,2482,2506~2
    507,2553,2555,2583~2584,2602
    15193 9jpo:b
    (3.18Å)
    		 119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00001 Escherichia
    coli
    562    		 N/A Assembly1
    rna:a:1~2903 41,78~81,89,96~97,99~100
    15194 9jpp:A
    (2.26Å)
    		 1512 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00177
    RF01959
    RF02542
    RF01960    		 Escherichia
    coli
    562    		 N/A Assembly1
    rna:a:1~2903 702,784,899,1407~1409,1418,142
    0,1429,1473~1475,1483~1484,149
    4~1496,1517
    rna:X:14~24 693,926,1397,1400~1402,1492~14
    93,1498
    rna:Z:1~77 790,966,1229~1230,1338~1340,14
    00
    rna:V:1~76 530~531,1054,1493
    15195 9jpp:V
    (2.26Å)
    		 73 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Homo
    sapiens
    9606    		 N/A Assembly1
    rna:A:1~1534 34~37
    rna:a:1~2903 19,37~38,52,56,63,74~76
    rna:X:14~24 34~37
    15196 9jpp:X
    (2.26Å)
    		 11 N/A N/A N/A Escherichia
    coli
    562    		 N/A Assembly1
    rna:A:1~1534 14,17~21,23~24
    rna:Z:1~77 17~19
    rna:V:1~76 20~22
    15197 9jpp:Z
    (2.26Å)
    		 77 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Escherichia
    coli
    BW25113
    679895    		 N/A Assembly1
    rna:A:1~1534 31~33,35,39,41~42
    rna:a:1~2903 12,25~26,75~77
    rna:X:14~24 35~38
    15198 9jpp:a
    (2.26Å)
    		 2761 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02540
    RF02541
    RF02543
    RF00002    		 Escherichia
    coli
    562    		 N/A Assembly1
    rna:A:1~1534 1700~1703,1832,1836~1837,1846,
    1848,1912~1916,1919~1920,1947~
    1948,1950,1959~1961
    rna:b:1~119 861~863,915,917~919,958,2340
    rna:Z:1~77 1907~1909,1922~1923,2251~2253,
    2450~2451,2602
    rna:V:1~76 896~897,1913,2470,2482~2483,25
    06~2507,2553~2555,2583~2585,26
    02
    15199 9jpp:b
    (2.26Å)
    		 119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00001 Escherichia
    coli
    562    		 N/A Assembly1
    rna:a:1~2903 41,78~81,89,96~97,99~100
    15200 9jq2:A
    (2.61Å)
    		 1512 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00177
    RF01959
    RF02542
    RF01960    		 Escherichia
    coli
    562    		 N/A Assembly1
    rna:a:1~2903 702,784,899,1407~1409,1418,142
    0,1429,1473~1475,1483~1484,149
    4~1496,1517
    rna:X:14~24 693,789,926,1397,1400~1402,149
    2~1493,1498
    rna:Z:1~77 790,966,1229~1230,1338~1340,14
    00
    rna:V:1~76 530~531,1054,1493
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    Reference:
  • Chengxin Zhang, Lydia Freddolino (2024) "FURNA: a database for function annotations of RNA structures," PLOS Biology 22(7): e3002476.