SEQ2FUN

FURNA
Download all results in tab-seperated text for 16611 RNAs.
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  • Hover over Ligand to view the name of the ligand and the ligand-binding nucleotides on the RNA.

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    # PDB
    (Resolution)    		 Length EC number
    & GO term     		RNAcentral Rfam Taxon PubMed ATtRACT
    motif     		Ligand &
    binding nucleotides
    16401 9v24:sa
    (3.1Å)
    		 1434 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF01960 Entamoeba
    histolytica
    HM-1:IMSS
    294381    		 40835601 Assembly1
    rna:lA:1~3503 622,893,951~953,1810~1813,1821
    ~1823,1892~1895,1904~1905,1927
    rna:sI:1~76 571,1299,1903
    rna:sJ:1~77 981,1216,1569~1570,1741~1743,1
    803
    rna:sK:1~10 571,884,1176,1800,1803~1805,19
    03,1908
    16402 9v25:lA
    (3.0Å)
    		 3140 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02543 Entamoeba
    histolytica
    HM-1:IMSS
    294381    		 40835601 Assembly1
    rna:lB:1~155 1~14,16~19,55,374,376~383,385~
    388,391~392,395,397,414~415,44
    7,449~464,790~791,827,1529~153
    0,1553~1554,1575,1671,1681,173
    2~1733,2032~2033,2462,2655,313
    8~3140
    rna:lC:1~117 1114~1117,1170~1174,1247,1273,
    1281,1296,1320~1321,1327
    rna:sI:72~76 2481,2689~2690,2962~2963,3114
    rna:sJ:1~77 2286~2287,2310~2312,2834~2835,
    2936~2937
    16403 9v25:lB
    (3.0Å)
    		 145 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00002 Entamoeba
    histolytica
    HM-1:IMSS
    294381    		 40835601 Assembly1
    rna:lA:1~3503 1~2,4~24,26~39,42,55~56,102,10
    7~108,112~113,137~149,151~155
    16404 9v25:lC
    (3.0Å)
    		 117 N/A N/A N/A Entamoeba
    histolytica
    HM-1:IMSS
    294381    		 40835601 Assembly1
    rna:lA:1~3503 76~78,81,83,87,91~93,97,99~101
    16405 9v25:sJ
    (3.0Å)
    		 16 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Entamoeba
    histolytica
    HM-1:IMSS
    294381    		 40835601 Assembly1
    rna:lA:1~3503 3~4,71~72,76~77
    16406 9v26:lA
    (3.1Å)
    		 3142 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02543 Entamoeba
    histolytica
    HM-1:IMSS
    294381    		 40835601 Assembly1
    rna:lB:1~155 1~19,22,55,374~383,385~388,391
    ,395,397,414~415,447,449~464,7
    90~791,827,1529~1530,1532,1553
    ~1554,1671,1681,1732~1733,2032
    ~2033,2462,2655,3138~3140
    rna:lC:1~117 1114~1117,1170~1174,1247,1273,
    1281,1296,1320~1321,1327
    rna:sI:1~76 2481~2482,2690,2748,2962~2963,
    3113~3114
    rna:sJ:1~77 2286~2287,2311~2312,2834~2835,
    2936~2937
    rna:sa:1~1945 965~967,2201,2331~2333,2335,23
    38~2339,2366~2368,2378~2380
    16407 9v26:lB
    (3.1Å)
    		 145 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00002 Entamoeba
    histolytica
    HM-1:IMSS
    294381    		 40835601 Assembly1
    rna:lA:1~3503 1~24,26~39,42~43,55,102,107,11
    2~113,137~149,151~155
    16408 9v26:lC
    (3.1Å)
    		 117 N/A N/A N/A Entamoeba
    histolytica
    HM-1:IMSS
    294381    		 40835601 Assembly1
    rna:lA:1~3503 76~79,81,83,87,91~93,97,99~101
    16409 9v26:sI
    (3.1Å)
    		 73 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Entamoeba
    histolytica
    HM-1:IMSS
    294381    		 40835601 Assembly1
    rna:lA:1~3503 18,56,74~76
    rna:sK:1~10 34~37
    rna:sa:1~1945 34~37
    16410 9v26:sJ
    (3.1Å)
    		 73 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Entamoeba
    histolytica
    HM-1:IMSS
    294381    		 40835601 Assembly1
    rna:lA:1~3503 3~4,71~72,76~77
    rna:sK:1~10 35~38
    rna:sa:1~1945 30~33,35,39,41~42
    16411 9v26:sK
    (3.1Å)
    		 10 N/A N/A N/A Entamoeba
    histolytica
    HM-1:IMSS
    294381    		 40835601 Assembly1
    rna:sI:1~76 7~9
    rna:sJ:1~77 4~6
    rna:sa:1~1945 1,4~9
    16412 9v26:sa
    (3.1Å)
    		 1401 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF01960 Entamoeba
    histolytica
    HM-1:IMSS
    294381    		 40835601 Assembly1
    rna:lA:1~3503 622~623,893,951~953,1810~1812,
    1821~1823,1892~1894,1904~1905,
    1927
    rna:sI:1~76 571,1299,1903
    rna:sJ:1~77 981,1216,1569~1570,1741~1744,1
    803
    rna:sK:1~10 571,884,1176,1803~1804,1902~19
    03,1908
    16413 9v27:sI
    (3.21Å)
    		 73 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Entamoeba
    histolytica
    HM-1:IMSS
    294381    		 40835601 Assembly1
    rna:sK:2~11 34~37
    rna:sa:1~1945 35~37
    16414 9v27:sJ
    (3.21Å)
    		 72 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Entamoeba
    histolytica
    HM-1:IMSS
    294381    		 40835601 Assembly1
    rna:sK:2~11 35~38
    rna:sa:1~1945 35,39
    16415 9v27:sK
    (3.21Å)
    		 10 N/A N/A N/A Entamoeba
    histolytica
    HM-1:IMSS
    294381    		 40835601 Assembly1
    rna:sI:1~76 8~10
    rna:sJ:1~77 5~7
    rna:sa:1~1945 2,6~11
    16416 9v27:sa
    (3.21Å)
    		 975 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF01960 Entamoeba
    histolytica
    HM-1:IMSS
    294381    		 40835601 Assembly1
    rna:sI:1~76 571,1903
    rna:sJ:1~77 981,1803
    rna:sK:2~11 571,884,1800,1803~1804,1902~19
    03,1908
    16417 9v29:sI
    (3.2Å)
    		 13 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Entamoeba
    histolytica
    HM-1:IMSS
    294381    		 40835601 Assembly1
    rna:sK:1~10 34~37
    rna:sa:1~1945 35,37
    16418 9v29:sJ
    (3.2Å)
    		 13 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Entamoeba
    histolytica
    HM-1:IMSS
    294381    		 40835601 Assembly1
    rna:sK:1~10 35~38
    rna:sa:1~1945 35,39
    16419 9v29:sK
    (3.2Å)
    		 10 N/A N/A N/A Entamoeba
    histolytica
    HM-1:IMSS
    294381    		 40835601 Assembly1
    rna:sI:29~41 7~9
    rna:sJ:30~42 4~6
    rna:sa:1~1945 1~2,5~9
    16420 9v29:sa
    (3.2Å)
    		 930 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF01960 Entamoeba
    histolytica
    HM-1:IMSS
    294381    		 40835601 Assembly1
    rna:sI:29~41 571,1903
    rna:sJ:30~42 981,1803
    rna:sK:1~10 571,884,980,1803~1804,1902~190
    3,1908
    16421 9v44:E
    (2.97Å)
    		 14 N/A N/A N/A Influenza
    A
    virus
    (A/Victoria/3/1975(H3N2))
    392809    		 41188214 Assembly1
    rna:F:1~24 232~239
    16422 9v44:F
    (2.97Å)
    		 24 N/A N/A N/A Influenza
    A
    virus
    (A/Victoria/3/1975(H3N2))
    392809    		 41188214 Assembly1
    rna:E:229~242 12~18
    16423 9v46:F
    (3.62Å)
    		 16 N/A URS0002915740 N/A Influenza
    A
    virus
    (A/Victoria/3/1975(H3N2))
    392809    		 41188214 Assembly1
    rna:E:234~242 12~16
    16424 9v48:E
    (4.75Å)
    		 16 N/A N/A N/A Influenza
    A
    virus
    (A/Victoria/3/1975(H3N2))
    392809    		 41188214 Assembly1
    rna:F:1~24 232,234~239
    16425 9v48:F
    (4.75Å)
    		 24 N/A N/A N/A Influenza
    A
    virus
    (A/Victoria/3/1975(H3N2))
    392809    		 41188214 Assembly1
    rna:E:227~242 12~18
    16426 9v7n:B
    (3.11Å)
    		 205 GO:0000372 (P) Group I intron splicing N/A RF00028 Azoarcus
    olearius
    418699    		 N/A Assembly1
    rna:D:1~39 1,9~11,36,86~87,167
    rna:E:40~79 3,5~6,205
    16427 9v7n:D
    (3.11Å)
    		 39 N/A N/A N/A Azoarcus
    olearius
    418699    		 N/A Assembly1
    rna:B:1~205 37~39
    rna:E:40~79 1~10,14~18,20~25,28~35
    16428 9v7n:E
    (3.11Å)
    		 40 N/A N/A N/A Azoarcus
    olearius
    418699    		 N/A Assembly1
    rna:B:1~205 40~42
    rna:D:1~39 42~49,51~52,58~65,69~76
    16429 9v7o:B
    (3.06Å)
    		 205 GO:0000372 (P) Group I intron splicing N/A RF00028 Azoarcus
    olearius
    418699    		 N/A Assembly1
    rna:D:1~39 1,9~11,36,86,166~168
    rna:E:40~79 3,5,205
    16430 9v7o:D
    (3.06Å)
    		 39 N/A N/A N/A Azoarcus
    olearius
    418699    		 N/A Assembly1
    rna:B:1~205 37~39
    rna:E:40~79 1~10,15~18,20~25,29~36
    16431 9v7o:E
    (3.06Å)
    		 40 N/A N/A N/A Azoarcus
    olearius
    418699    		 N/A Assembly1
    rna:B:1~205 40~42
    rna:D:1~39 40,42~49,51~52,57~65,69~76
    16432 9vck:P
    (4.22Å)
    		 26 N/A N/A N/A Severe
    acute
    respiratory
    syndrome
    coronavirus
    2
    2697049    		 40509573 Assembly1
    rna:T:5~32 45~70
    16433 9vck:T
    (4.22Å)
    		 28 N/A N/A N/A Severe
    acute
    respiratory
    syndrome
    coronavirus
    2
    2697049    		 40509573 Assembly1
    rna:P:45~70 7~32
    16434 9vcl:P
    (3.08Å)
    		 26 N/A N/A N/A Severe
    acute
    respiratory
    syndrome
    coronavirus
    2
    2697049    		 40509573 Assembly1
    rna:T:5~32 45~70
    16435 9vcl:T
    (3.08Å)
    		 28 N/A N/A N/A Severe
    acute
    respiratory
    syndrome
    coronavirus
    2
    2697049    		 40509573 Assembly1
    rna:P:45~70 7~32
    16436 9vku:E
    (3.49Å)
    		 163 N/A N/A N/A Escherichia
    coli
    562    		 40836036 Assembly1
    rna:H:1~178 114~115
    16437 9vku:F
    (3.49Å)
    		 163 N/A N/A N/A Escherichia
    coli
    562    		 40836036 Assembly1
    rna:G:1~178 94~95
    16438 9vku:G
    (3.49Å)
    		 163 N/A N/A N/A Escherichia
    coli
    562    		 40836036 Assembly1
    rna:F:1~178 114~115
    16439 9vku:H
    (3.49Å)
    		 163 N/A N/A N/A Escherichia
    coli
    562    		 40836036 Assembly1
    rna:E:1~178 94~95
    16440 9vma:G
    (3.46Å)
    		 163 N/A N/A N/A Escherichia
    coli
    562    		 40836036 Assembly1
    rna:I:1~178 94~95
    rna:K:1~178 114~115
    16441 9vma:H
    (3.46Å)
    		 160 N/A N/A N/A Escherichia
    coli
    562    		 40836036 Assembly1
    rna:J:1~178 114~115
    rna:L:1~178 94~95
    16442 9vma:I
    (3.46Å)
    		 160 N/A N/A N/A Escherichia
    coli
    562    		 40836036 Assembly1
    rna:G:1~178 114~115
    rna:K:1~178 94~95
    16443 9vma:J
    (3.46Å)
    		 160 N/A N/A N/A Escherichia
    coli
    562    		 40836036 Assembly1
    rna:H:1~178 94~95
    rna:L:1~178 114~115
    16444 9vma:K
    (3.46Å)
    		 160 N/A N/A N/A Escherichia
    coli
    562    		 40836036 Assembly1
    rna:G:1~178 94~95
    rna:I:1~178 114~115
    16445 9vma:L
    (3.46Å)
    		 160 N/A N/A N/A Escherichia
    coli
    562    		 40836036 Assembly1
    rna:H:1~178 114~115
    rna:J:1~178 94~95
    16446 9w2k:I
    (1.798Å)
    		 13 N/A N/A N/A Archaeoglobus
    fulgidus
    2234    		 40884401 Assembly1
    rna:F:6~13 9~12,15~18
    rna:H:15~18 6,8~10
    16447 9whv:A

    		 10 N/A N/A N/A Homo
    sapiens
    9606    		 N/A Assembly1
    rna:B:1~10 1~6
    rna:D:1~10 1~7
    rna:E:1~10 1~4
    rna:H:1~10 1~3
    16448 9whv:B

    		 10 N/A N/A N/A Homo
    sapiens
    9606    		 N/A Assembly1
    rna:A:1~10 1~7
    rna:C:1~10 1~6,10
    rna:G:1~10 1~3
    rna:H:1~10 1~4
    16449 9whv:C

    		 10 N/A N/A N/A Homo
    sapiens
    9606    		 N/A Assembly1
    rna:B:1~10 1~3,5~7,10
    rna:D:1~10 1~6
    rna:F:1~10 1~3
    rna:G:1~10 1~4
    16450 9whv:D

    		 10 N/A N/A N/A Homo
    sapiens
    9606    		 N/A Assembly1
    rna:A:1~10 1~6
    rna:C:1~10 1~7,10
    rna:E:1~10 1~4
    rna:F:1~10 1~4
    16451 9whv:E

    		 10 N/A N/A N/A Homo
    sapiens
    9606    		 N/A Assembly1
    rna:A:1~10 1~4
    rna:D:1~10 1~3
    rna:F:1~10 1~6
    rna:H:1~10 1~3,5~7,10
    16452 9whv:F

    		 10 N/A N/A N/A Homo
    sapiens
    9606    		 N/A Assembly1
    rna:C:1~10 1~3
    rna:D:1~10 1~4
    rna:E:1~10 1~3,5~7
    rna:G:1~10 1~6
    16453 9whv:G

    		 10 N/A N/A N/A Homo
    sapiens
    9606    		 N/A Assembly1
    rna:B:1~10 1~4
    rna:C:1~10 1~4
    rna:F:1~10 1~7
    rna:H:1~10 1~7,10
    16454 9whv:H

    		 10 N/A N/A N/A Homo
    sapiens
    9606    		 N/A Assembly1
    rna:A:1~10 1~3
    rna:B:1~10 1~4
    rna:E:1~10 1~6,10
    rna:G:1~10 1~7,10
    16455 9wnq:A
    (2.59Å)
    		 1533 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00000ABFE9 RF00177 Escherichia
    coli
    562    		 41099701 Assembly1
    rna:Y:1~77 966,1338~1340,1400
    rna:Z:1~77 530,1054,1493
    rna:b:2~2903 702,784,1407~1409,1418,1429,14
    83~1484,1493~1495,1517
    rna:x:10~23 693,926,1397,1400~1401,1492,14
    98
    16456 9wnq:X
    (2.59Å)
    		 76 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Escherichia
    coli
    562    		 41099701 Assembly1
    rna:b:2~2903 3,17,19,56~57,71,75~76
    rna:x:10~23 34~37
    16457 9wnq:Y
    (2.59Å)
    		 77 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Escherichia
    coli
    562    		 41099701 Assembly1
    rna:A:1~1533 32,35,42
    rna:b:2~2903 12,25,75~77
    rna:x:10~23 35~37
    16458 9wnq:Z
    (2.59Å)
    		 77 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Escherichia
    coli
    562    		 41099701 Assembly1
    rna:A:1~1533 35~38
    rna:b:2~2903 20,38,57,64,75~77
    rna:x:10~23 35~38
    16459 9wnq:a
    (2.59Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00001 Escherichia
    coli
    562    		 41099701 Assembly1
    rna:b:2~2903 41,78~80,89,97,99~100
    16460 9wnq:b
    (2.59Å)
    		 2902 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02541 Escherichia
    coli
    562    		 41099701 Assembly1
    rna:A:1~1533 1703,1837,1848,1912~1913,1915~
    1916,1919~1920,1947~1948,1959~
    1960
    rna:X:1~76 1851,2112,2168,2180,2394~2395,
    2421~2422,2432
    rna:Y:1~77 1923,2251~2252,2450~2451,2602
    rna:Z:1~77 896~897,1913,2482,2506~2507,25
    53~2555,2583
    rna:a:1~120 861~863,917~918,958,2340
    16461 9wnq:x
    (2.59Å)
    		 14 N/A N/A N/A Escherichia
    coli
    562    		 41099701 Assembly1
    rna:A:1~1533 12,15~17,19,22
    rna:X:1~76 12~14
    rna:Y:1~77 15~17
    rna:Z:1~77 18~20
    16462 9wnr:A
    (2.76Å)
    		 1533 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00000ABFE9 RF00177 Escherichia
    coli
    562    		 41099701 Assembly1
    rna:Y:1~77 966,1338~1339,1400
    rna:Z:1~77 1054,1493
    rna:b:1~2903 702,784,1407~1408,1418,1429,14
    83~1484,1493~1495,1517
    rna:x:10~23 693,1195~1196,1397,1492~1493,1
    498
    16463 9wnr:X
    (2.76Å)
    		 76 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Escherichia
    coli
    562    		 41099701 Assembly1
    rna:A:1~1533 38~39
    rna:b:1~2903 19,56~57,71,75~76
    rna:x:10~23 34~37
    16464 9wnr:Y
    (2.76Å)
    		 77 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Escherichia
    coli
    562    		 41099701 Assembly1
    rna:A:1~1533 35,41~42
    rna:b:1~2903 75~77
    rna:x:10~23 35~38
    16465 9wnr:Z
    (2.76Å)
    		 77 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Escherichia
    coli
    562    		 41099701 Assembly1
    rna:A:1~1533 35,37~38
    rna:b:1~2903 20,39,64,75~77
    rna:x:10~23 35~38
    16466 9wnr:a
    (2.76Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00001 Escherichia
    coli
    562    		 41099701 Assembly1
    rna:b:1~2903 41,78~80,89,96,99~100
    16467 9wnr:b
    (2.76Å)
    		 2903 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02541 Escherichia
    coli
    562    		 41099701 Assembly1
    rna:A:1~1533 1703,1837,1846~1848,1912~1913,
    1919~1920,1947~1948,1959~1960
    rna:X:1~76 1851,2112~2113,2168,2394,2421~
    2422,2432
    rna:Y:1~77 2251~2252,2450~2451,2602
    rna:Z:1~77 896,1913,2482,2506~2507,2553~2
    555,2583~2584
    rna:a:1~120 861~863,915,917~918,958,2340
    16468 9wnr:x
    (2.76Å)
    		 14 N/A N/A N/A Escherichia
    coli
    562    		 41099701 Assembly1
    rna:A:1~1533 12,15~16,19,21~22
    rna:X:1~76 12~14
    rna:Y:1~77 15~17
    rna:Z:1~77 18~21
    16469 9y42:A5
    (5.0Å)
    		 1732 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02543
    RF02540
    RF02541    		 Heterocephalus
    glaber
    10181    		 41603730 Assembly1
    rna:A7:1~121 1736~1739,1741,1792,1794~1796,
    1894,1908~1909,1936,1942~1943
    rna:A8:1~157 2~22,58,146,341~348,350~353,35
    6~357,360~362,379~380,409,413,
    415~430,1304~1305,1333~1334,13
    71
    rna:B2:1~1869 1563~1565
    rna:A6:2261~5070 9~10,30~31,39~42,52~54,70,92,2
    05~206,208,233~234,287,295,301
    ~304,314~323,349~351,354~355,3
    95,409~410,416~418,420~421,431
    ~433,445~447,707~709,961~963,1
    290~1293,1297~1300,1302~1303,1
    313~1316,1319,1321~1337,1391~1
    393,1485,1494~1495,1522~1525,1
    535~1536,1540~1543,1547~1548,1
    555~1556,1572~1575,1577~1578,1
    583,1586,1588~1593,1595~1596,1
    598~1603,1607~1609,1613,1617,1
    619~1621,1625,1630~1636,1638,1
    641~1642,1654~1668,1674~1679,1
    684,1688~1689,1733~1735,1787~1
    788,1794~1798,1850,1854,1862~1
    863,1866~1870,1872~1874,1881~1
    882,1888~1889,1891,1897~1899,1
    930,1940,1942~1944,1947,1963~1
    965,2023,2041~2047,2049~2050,2
    078~2083,2085~2090
    16470 9y42:A6
    (5.0Å)
    		 2122 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02543
    RF02540
    RF02541    		 Heterocephalus
    glaber
    10181    		 41603730 Assembly1
    rna:Cc:1~77 3714~3715,3739~3740,3958,4046,
    4341~4342,4370~4371
    rna:A5:1~2091 2261~2266,2268,2270~2288,2290,
    2294~2295,2303~2305,2309~2311,
    2313~2317,2320~2321,2329~2332,
    2341,2343~2357,2379,2396,2448~
    2450,2460~2462,2472,2511,2513~
    2514,2605,2667~2669,2743,2793~
    2794,2797~2799,2812~2814,2839~
    2840,2856,3636~3643,3645~3646,
    3650~3652,3726~3728,3828,3861,
    3864~3867,3870~3885,3887~3889,
    3901,3906,3912,3914~3919,3935~
    3936,4176~4178,4186,4188~4189,
    4191,4193,4209~4210,4212~4215,
    4217~4220,4223,4297~4298,4304~
    4305,4341,4349,4351,4354~4362,
    4364~4365,4374~4380,4386,4388~
    4392,4394,4401~4403,4405,4409~
    4412,4432~4434,4437,4440~4442,
    4444~4446,4448,4461~4462,4464,
    4515~4518,4527,4534~4535,4555~
    4558,4560,4683~4684,4693~4695,
    4941~4945
    rna:A8:1~157 2308~2309,2313,2333~2334,2355,
    2444~2445,2486~2487,2493,2508~
    2510,2542~2544,2778~2779,3891,
    4162,4572~4573
    rna:B2:1~1869 2884,3709,3711,3759~3763,3766~
    3767,3794~3796,3806~3808
    16471 9y42:A7
    (5.0Å)
    		 121 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00000F9D45 RF00001 Heterocephalus
    glaber
    10181    		 41603730 Assembly1
    rna:A5:1~2091 77~80,84,88,98,100~104
    16472 9y42:A8
    (5.0Å)
    		 157 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00002
    RF02540    		 Heterocephalus
    glaber
    10181    		 41603730 Assembly1
    rna:A5:1~2091 4~22,24~37,40~41,53~54,103,115
    ,136,138~139,141~149,151~156
    rna:A6:2261~5070 1,4,9~10,15,18~21,108~110,112~
    113,124~128,150
    16473 9y42:B2
    (5.0Å)
    		 1837 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF01960
    RF02542
    RF01959
    RF00177    		 Heterocephalus
    glaber
    10181    		 41603730 Assembly1
    rna:Cc:1~77 1248,1524~1525,1639~1641
    rna:A5:1~2091 677~678,1028~1030
    rna:A6:2261~5070 970,1708~1710,1719~1720,1731,1
    815~1817,1826~1828,1849
    16474 9y42:Cc
    (5.0Å)
    		 77 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Heterocephalus
    glaber
    10181    		 41603730 Assembly1
    rna:B2:1~1869 30~33,35,41~43
    rna:A6:2261~5070 3~4,20,57,71~72,76~77
    16475 9y44:A5
    (4.9Å)
    		 1717 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02543
    RF02540
    RF02541    		 Heterocephalus
    glaber
    10181    		 41603730 Assembly1
    rna:A7:2~121 1736~1739,1741,1792~1796,1894,
    1908~1909,1936,1942
    rna:A8:2~157 2~22,58,146,339,341~348,350~35
    3,356~357,360,362,379~380,413,
    415~430,1304~1305,1333~1334,13
    71
    rna:B2:2~1869 1563~1565
    rna:A6:2262~5070 9~10,30~31,40~42,53~54,70,91~9
    2,205,209,233~234,287,295,301~
    304,314~323,349~350,354,395,40
    9~410,415~418,420~421,431~433,
    443,445~447,707~708,961~963,12
    89~1293,1300,1303,1313~1316,13
    19,1321~1337,1391~1393,1485,14
    94,1522~1525,1535~1536,1540~15
    45,1547~1549,1555~1556,1572~15
    75,1577~1578,1583,1586,1588~15
    93,1595~1596,1598~1603,1607~16
    09,1611~1613,1617,1619~1621,16
    25,1630~1636,1638,1641~1642,16
    54~1668,1672~1679,1684,1688~16
    89,1733~1735,1787~1788,1794~17
    96,1798,1850~1851,1854,1862~18
    63,1866~1874,1881~1882,1888~18
    91,1898~1899,1939~1944,1947,19
    63~1965,2023,2041~2047,2049~20
    50,2078~2083,2085~2090
    16476 9y44:A6
    (4.9Å)
    		 2092 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02543
    RF02540
    RF02541    		 Heterocephalus
    glaber
    10181    		 41603730 Assembly1
    rna:A5:2~2090 2262~2266,2268,2270~2288,2290,
    2294~2295,2304~2305,2310~2311,
    2313~2315,2321,2329~2331,2340~
    2341,2343~2357,2379,2396,2448~
    2450,2460~2462,2472,2511,2513~
    2514,2603~2605,2667~2669,2743,
    2793~2795,2797~2799,2804,2812~
    2814,2839~2840,2856~2857,3636~
    3643,3645~3646,3650~3651,3726~
    3728,3828,3861,3864~3867,3871~
    3879,3881~3885,3887~3889,3901,
    3906,3912,3914~3919,3924,3935~
    3936,4176~4178,4186,4188~4189,
    4191~4193,4195,4209~4215,4217,
    4219~4220,4297,4304~4305,4341,
    4349,4351~4362,4364~4365,4376~
    4380,4386,4388~4391,4394,4402~
    4403,4405,4409,4411~4412,4432~
    4434,4440~4448,4461~4464,4515~
    4518,4527,4534~4535,4555~4558,
    4560,4693~4695,4940~4945
    rna:A8:2~157 2308~2309,2313,2333~2334,2355~
    2356,2444~2445,2486~2487,2493,
    2508~2510,2543~2544,2778~2779,
    4162
    rna:B2:2~1869 3709,3759~3763,3766~3767,3794~
    3796,3806~3808
    rna:Cc:2~77 3714~3715,3739~3740,3956~3958,
    4046,4342~4343,4369~4372,4379
    rna:Bb:2~76 3760,3762,3788,4452~4453,4499~
    4501,4529~4530
    16477 9y44:A7
    (4.9Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00001 Heterocephalus
    glaber
    10181    		 41603730 Assembly1
    rna:A5:2~2090 77~80,84,88,98,100~103
    16478 9y44:A8
    (4.9Å)
    		 156 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00002
    RF02540    		 Heterocephalus
    glaber
    10181    		 41603730 Assembly1
    rna:A5:2~2090 4~22,24~37,40~41,52~54,103,115
    ,135~136,138~149,151~157
    rna:A6:2262~5070 9~10,14,18~21,108,110,112~113,
    125~127,150
    16479 9y44:B2
    (4.9Å)
    		 1804 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF01960
    RF02542
    RF01959
    RF00177    		 Heterocephalus
    glaber
    10181    		 41603730 Assembly1
    rna:A5:2~2090 677,1028~1030
    rna:A6:2262~5070 970,1708~1710,1719~1720,1815~1
    816,1825~1827,1849
    rna:Cc:2~77 1058,1248~1249,1524,1639~1642,
    1701
    rna:Bb:2~76 626,1331,1825
    rna:Dd:13~25 626,961~962,1207,1698,1701~170
    2,1704,1825,1830,1837~1838
    16480 9y44:Bb
    (4.9Å)
    		 65 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Heterocephalus
    glaber
    10181    		 41603730 Assembly1
    rna:B2:2~1869 34~37
    rna:A6:2262~5070 25,37~39,71,75~76
    rna:Dd:13~25 34~37
    16481 9y44:Cc
    (4.9Å)
    		 76 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Heterocephalus
    glaber
    10181    		 41603730 Assembly1
    rna:B2:2~1869 30~36,39,41~42
    rna:A6:2262~5070 20~21,57~58,72~73,76~77
    rna:Dd:13~25 36~38
    16482 9y44:Dd
    (4.9Å)
    		 13 N/A N/A N/A Heterocephalus
    glaber
    10181    		 41603730 Assembly1
    rna:B2:2~1869 15~16,18~22,24~25
    rna:Cc:2~77 19~21
    rna:Bb:2~76 22~25
    16483 9y49:A5
    (3.4Å)
    		 1715 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02543
    RF02540
    RF02541    		 Ctenomyidae
    30645    		 41603730 Assembly1
    rna:B2:1~1869 1563~1565
    rna:A7:1~121 1736~1739,1741,1792~1796,1894,
    1909,1936,1942
    rna:A8:1~157 2~22,58,146,341~348,350~354,35
    6~357,360~362,379~380,409,413,
    415~430,1304~1305,1333~1334,13
    71
    rna:A6:2252~5070 1,9~10,30,40~42,52~54,70,92~93
    ,205~206,208~209,233~234,287,2
    95,301~304,314~323,349~351,354
    ~355,395,409~410,416~418,420~4
    21,431~433,445,707~709,960~969
    ,972,1290~1293,1298,1302~1304,
    1313~1316,1319,1321~1337,1391~
    1392,1485,1494~1495,1522~1525,
    1535~1536,1540~1543,1547~1549,
    1555,1572~1575,1577~1578,1583,
    1586,1588~1593,1595~1596,1598~
    1603,1607~1609,1611,1613,1616~
    1617,1619~1621,1625,1630~1636,
    1638,1641~1642,1654~1668,1673~
    1679,1684,1688~1689,1733~1735,
    1787~1788,1794~1796,1798,1841,
    1850~1851,1854,1862~1863,1866~
    1875,1881~1882,1888~1891,1897~
    1899,1939~1943,1947,1963~1965,
    2041~2047,2049~2050,2078~2083,
    2085~2090
    16484 9y49:A6
    (3.4Å)
    		 2069 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02543
    RF02540
    RF02541    		 Ctenomyidae
    30645    		 41603730 Assembly1
    rna:tR:1~77 3715,3738~3740,3958,4180,4341~
    4342,4370~4371
    rna:B2:1~1869 2884~2885,3709~3710,3759~3763,
    3766~3767,3794~3795,3806~3808
    rna:A5:1~2090 2252~2256,2258~2266,2268,2270~
    2288,2290,2294~2295,2303~2305,
    2309~2311,2313~2317,2320~2321,
    2330,2340~2341,2343,2345~2357,
    2379,2396,2448~2451,2460~2462,
    2472,2511,2513~2514,2604~2606,
    2667~2668,2743,2793~2795,2797~
    2799,2802,2812~2815,2839~2840,
    2856~2857,3636~3643,3646~3647,
    3650~3652,3726~3728,3828,3861,
    3864~3867,3870~3885,3887~3889,
    3901,3906,3912~3919,3935~3936,
    4154,4175~4178,4186~4189,4191~
    4193,4195,4209~4215,4217~4220,
    4297,4303~4305,4340~4341,4349,
    4351,4353~4365,4376~4380,4386,
    4388~4391,4394,4402~4403,4405,
    4409~4411,4432~4434,4437,4440~
    4442,4444~4448,4461~4462,4464,
    4515~4516,4518,4527,4534~4535,
    4554~4558,4560,4693~4695,4940~
    4942,4944~4945
    rna:A8:1~157 2308~2309,2312~2313,2333~2334,
    2355,2444~2445,2493,2507~2509,
    2542,2544,2778~2779,4162,4573
    16485 9y49:A7
    (3.4Å)
    		 121 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00000F9D45 RF00001 Ctenomyidae
    30645    		 41603730 Assembly1
    rna:A5:1~2090 77~80,84,88,98~104
    16486 9y49:A8
    (3.4Å)
    		 157 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00002
    RF02540    		 Ctenomyidae
    30645    		 41603730 Assembly1
    rna:A5:1~2090 4~37,40~41,53~54,103,115,136,1
    38~149,151~156
    rna:A6:2252~5070 1,9~10,15,19~21,108~110,112~11
    3,126~127,150
    16487 9y49:B2
    (3.4Å)
    		 1786 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF01960
    RF02542
    RF01959
    RF00177    		 Ctenomyidae
    30645    		 41603730 Assembly1
    rna:tR:1~77 1057~1058,1248,1524~1525,1639~
    1641
    rna:A5:1~2090 677~678,1028~1030
    rna:A6:2252~5070 970,1708~1710,1719,1731,1815~1
    817,1825~1828,1849
    16488 9y49:tR
    (3.4Å)
    		 77 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Ctenomyidae
    30645    		 41603730 Assembly1
    rna:B2:1~1869 31~32,35,38~39,41~42
    rna:A6:2252~5070 3,57,72~74,76~77
    16489 9y4g:A5
    (3.3Å)
    		 1733 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02543
    RF02540
    RF02541    		 Ctenomyidae
    30645    		 41603730 Assembly1
    rna:B2:1~1869 1563~1565
    rna:A7:1~121 1736~1739,1741,1792~1796,1894,
    1909,1936,1942~1943
    rna:A8:1~156 2~22,58,146~147,341~348,350~35
    4,356~357,360,362,379~380,413,
    415~430,1304~1305,1333~1334,13
    71
    rna:A6:2252~5070 1,9~10,40~42,52~54,70,92,205~2
    06,208~209,233~234,287,295,301
    ~304,314~323,349~351,354~355,3
    95,409~410,415~418,420~421,431
    ~433,445~446,706~708,961~969,9
    72,1290~1292,1298,1300,1302~13
    03,1313~1316,1319,1321~1337,13
    91~1393,1485,1494,1511,1523~15
    25,1535~1536,1540~1543,1545,15
    47~1548,1555,1572~1575,1577~15
    78,1583,1586,1588~1593,1595~15
    96,1598~1603,1607~1609,1611,16
    13,1616~1617,1619~1621,1625,16
    30~1635,1638,1641~1642,1654~16
    68,1673~1679,1684,1688~1689,17
    33~1735,1787~1788,1794~1796,17
    98,1841,1850~1851,1854,1861~18
    63,1866~1874,1881~1882,1888~18
    91,1898~1899,1930,1939,1941~19
    43,1947,1963~1965,2041~2047,20
    49~2050,2078~2083,2085~2092
    16490 9y4g:A6
    (3.3Å)
    		 2103 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02543
    RF02540
    RF02541    		 Ctenomyidae
    30645    		 41603730 Assembly1
    rna:B2:1~1869 2884,3709,3759~3761,3763,3766~
    3767,3794~3796,3806~3808
    rna:A5:1~2123 2252,2254~2257,2259,2261~2266,
    2268,2270~2288,2290,2294~2295,
    2304~2305,2309~2311,2313~2317,
    2319~2321,2329~2331,2340~2341,
    2343,2345~2346,2348~2357,2379,
    2396,2448~2451,2460~2462,2472,
    2511,2513~2514,2604~2606,2667~
    2669,2743,2793~2795,2797~2799,
    2802,2804,2812~2813,2815,2839~
    2840,2856~2857,3636~3643,3646,
    3650~3652,3726~3728,3828,3861,
    3864~3867,3871~3885,3887~3889,
    3901,3906,3912,3914~3919,3924,
    3935~3936,4153,4175~4178,4186,
    4188,4191,4193,4195,4209~4215,
    4217~4220,4296~4297,4303~4305,
    4340~4341,4349,4351,4353~4362,
    4364~4365,4376~4380,4386,4388~
    4392,4394,4402~4403,4405,4409,
    4411~4412,4432~4434,4437,4440~
    4442,4444~4448,4461~4462,4464,
    4515~4518,4527,4534~4535,4554~
    4558,4560,4684,4693~4695,4940~
    4945
    rna:A8:1~156 2308~2309,2312~2313,2333~2334,
    2355~2356,2444~2445,2487~2488,
    2493,2508,2510,2542,2544,2778~
    2779,3890~3891,4573
    rna:Cc:1~77 3715,4341~4342,4370~4371
    rna:Bb:1~76 3760,3762,4452~4453,4499~4501,
    4529~4531
    16491 9y4g:A7
    (3.3Å)
    		 121 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00000F9D45 RF00001 Ctenomyidae
    30645    		 41603730 Assembly1
    rna:A5:1~2123 77~80,84,88,98,100~104
    16492 9y4g:A8
    (3.3Å)
    		 156 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00002
    RF02540    		 Ctenomyidae
    30645    		 41603730 Assembly1
    rna:A5:1~2123 4~22,24~37,40~41,53~54,103,115
    ,136,138~149,151~156
    rna:A6:2252~5070 1,4,9~10,14~15,18~20,108,110,1
    12~113,124~128
    16493 9y4g:B2
    (3.3Å)
    		 1778 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF01960
    RF02542
    RF01959
    RF00177    		 Ctenomyidae
    30645    		 41603730 Assembly1
    rna:A5:1~2123 677~678,1028~1030
    rna:Cc:1~77 1058,1248,1524~1525,1639~1641,
    1701
    rna:Bb:1~76 626~627,1331,1825
    rna:Dd:13~25 626,961,1698,1701~1702,1825,18
    30,1837
    rna:A6:2252~5070 970,1708~1710,1719~1720,1731,1
    815~1816,1826~1828,1849
    16494 9y4g:Bb
    (3.3Å)
    		 65 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Ctenomyidae
    30645    		 41603730 Assembly1
    rna:B2:1~1869 34~35,37
    rna:Dd:13~25 34~37
    rna:A6:2252~5070 25,37~38,75~76
    16495 9y4g:Cc
    (3.3Å)
    		 77 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Ctenomyidae
    30645    		 41603730 Assembly1
    rna:B2:1~1869 30~32,35,39,41~43
    rna:Dd:13~25 35~38
    rna:A6:2252~5070 73,76~77
    16496 9y4g:Dd
    (3.3Å)
    		 13 N/A N/A N/A Ctenomyidae
    30645    		 41603730 Assembly1
    rna:B2:1~1869 16,18~22,24~25
    rna:Cc:1~77 19~21
    rna:Bb:1~76 22~24
    16497 9y4h:A5
    (4.7Å)
    		 3875 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02540
    RF02541
    RF02543    		 Cavia
    porcellus
    10141    		 41603730 Assembly1
    rna:B2:1~1869 1563~1565,3709,3759~3763,3766~
    3767,3794,3806~3807
    rna:A7:1~121 1736~1739,1741,1794~1796,1894,
    1909,1936,1942
    rna:A8:1~156 2~22,58,146,341~348,350~353,35
    6~357,360,362,379~380,409,413,
    415~430,1304~1305,1333~1334,13
    71,2308~2309,2312~2313,2333~23
    34,2355,2444,2472,2507~2508,25
    44,2778,4572~4573
    rna:Cw:1~77 3715,3958,4341~4342,4370~4371
    16498 9y4h:A7
    (4.7Å)
    		 121 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00000F9D45 RF00001 Cavia
    porcellus
    10141    		 41603730 Assembly1
    rna:A5:1~5070 77~80,84,88,98,100~103
    16499 9y4h:A8
    (4.7Å)
    		 156 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00002
    RF02540    		 Cavia
    porcellus
    10141    		 41603730 Assembly1
    rna:A5:1~5070 1~22,24~37,40,53~54,107~108,11
    0,112~113,124,126,136,138~149,
    151~156
    16500 9y4h:B2
    (4.7Å)
    		 1773 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF01960
    RF02542
    RF01959
    RF00177    		 Cavia
    porcellus
    10141    		 41603730 Assembly1
    rna:A5:1~5070 677~678,970,1028~1030,1708~171
    0,1719,1731,1815~1816,1825~182
    8,1849
    rna:Cw:1~77 1058,1248,1524~1525,1639~1641,
    1701
    rna:Dd:19~25 1698,1701~1702,1830
    << < 155 156 157 158 159 160 161 162 163 164 165 166 167 > >>
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    Reference:
  • Chengxin Zhang, Lydia Freddolino (2024) "FURNA: a database for function annotations of RNA structures," PLOS Biology 22(7): e3002476.