SEQ2FUN

FURNA
Download all results in tab-seperated text for 14210 RNAs.
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  • Hover over Ligand to view the name of the ligand and the ligand-binding nucleotides on the RNA.

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    # PDB
    (Resolution)    		 Length EC number
    & GO term     		RNAcentral Rfam Taxon PubMed ATtRACT
    motif     		Ligand &
    binding nucleotides
    2201 4pjo:3
    (3.3Å)
    		 47 N/A URS000080E380 N/A Homo
    sapiens
    9606    		 25555158 Assembly3
    rna:Y:1~10 1~10,26
    2202 4pjo:4
    (3.3Å)
    		 49 N/A URS000080E380 N/A Homo
    sapiens
    9606    		 25555158
    509    		 Assembly4
    rna:y:1~10 1~11,25~26
    2203 4pjo:X
    (3.3Å)
    		 10 N/A URS000080E0CC N/A Homo
    sapiens
    9606    		 25555158 Assembly1
    rna:1:1~138 1~10
    2204 4pjo:Y
    (3.3Å)
    		 10 N/A URS000080E0CC N/A Homo
    sapiens
    9606    		 25555158 Assembly3
    rna:3:1~137 1~10
    2205 4pjo:x
    (3.3Å)
    		 10 N/A URS000080E0CC N/A Homo
    sapiens
    9606    		 25555158 Assembly2
    rna:2:1~138 1~10
    2206 4pjo:y
    (3.3Å)
    		 10 N/A URS000080E0CC N/A Homo
    sapiens
    9606    		 25555158 Assembly4
    rna:4:1~139 1~10
    2207 4qik:C
    (1.9Å)
    		 18 N/A URS000080DEFB N/A synthetic
    construct
    32630    		 25026078 Assembly1
    rna:D:5~22 3,5~12,14~20
    2208 4qik:D
    (1.9Å)
    		 18 N/A URS000080DEFB N/A synthetic
    construct
    32630    		 25026078 Assembly1
    rna:C:3~21 5~21
    2209 4qjd:A
    (3.1Å)
    		 24 N/A URS000080DE8E N/A synthetic
    construct
    32630    		 25157168 Assembly1
    rna:B:27~73 5~23
    2210 4qjd:B
    (3.1Å)
    		 47 GO:0003824 (F) catalytic activity URS000080DED8 RF03160 synthetic
    construct
    32630    		 25157168 Assembly1
    rna:A:3~26 30~39,44~46,48~51,59~66
    2211 4qjd:C
    (3.1Å)
    		 25 N/A URS000080DE8E N/A synthetic
    construct
    32630    		 25157168 Assembly2
    rna:D:27~73 5~23
    2212 4qjd:D
    (3.1Å)
    		 47 GO:0003824 (F) catalytic activity URS000080DED8 RF03160 synthetic
    construct
    32630    		 25157168 Assembly2
    rna:C:1~25 30~39,48~52,59~66
    2213 4qjd:E
    (3.1Å)
    		 26 N/A URS000080DE8E N/A synthetic
    construct
    32630    		 25157168 Assembly3
    rna:F:27 5~23
    2214 4qjd:F
    (3.1Å)
    		 47 GO:0003824 (F) catalytic activity URS000080DED8 RF03160 synthetic
    construct
    32630    		 25157168 Assembly3
    rna:E:1~26 30~39,48~52,59~66
    2215 4qjd:G
    (3.1Å)
    		 25 N/A URS000080DE8E N/A synthetic
    construct
    32630    		 25157168 Assembly4
    rna:H:27 5~22,24~25
    2216 4qjd:H
    (3.1Å)
    		 47 GO:0003824 (F) catalytic activity URS000080DED8 RF03160 synthetic
    construct
    32630    		 25157168 Assembly4
    rna:G:1~25 27,30~39,48~51,59~66
    2217 4qjh:A
    (3.88Å)
    		 26 N/A URS000080DF67 N/A synthetic
    construct
    32630    		 25157168 Assembly1
    rna:B:27 1~26
    2218 4qjh:B
    (3.88Å)
    		 48 N/A URS000080E16D N/A synthetic
    construct
    32630    		 25157168 Assembly1
    rna:A:1~26 27~35,40~41,44~47,55~61,63,67~
    74
    2219 4qjh:C
    (3.88Å)
    		 26 N/A URS000080DF67 N/A synthetic
    construct
    32630    		 25157168 Assembly2
    rna:D:27~74 1~11,13~26
    2220 4qjh:D
    (3.88Å)
    		 48 N/A URS000080E16D N/A synthetic
    construct
    32630    		 25157168 Assembly2
    rna:C:1~26 27~35,40~41,44~47,55~63,67~74
    2221 4qjh:E
    (3.88Å)
    		 26 N/A URS000080DF67 N/A synthetic
    construct
    32630    		 25157168 Assembly3
    rna:F:27~74 1~21,23~26
    2222 4qjh:F
    (3.88Å)
    		 48 N/A URS000080E16D N/A synthetic
    construct
    32630    		 25157168 Assembly3
    rna:E:1~26 27~34,40~41,44~47,55~63,67~74
    2223 4qln:A
    (2.65Å)
    		 117 GO:0180001 (F) cyclic-di-AMP binding
    GO:0010468 (P) regulation of gene expr...    		 URS000080E09A RF00379 Caldanaerobacter
    subterraneus
    subsp.
    tengcongensis
    MB4
    273068    		 25086509 Assembly1
    rna:A-2:2~123 13~15,19~22,29,75~77,99~101,12
    1~122
    2224 4r0d:A
    (3.676Å)
    		 617 GO:0000373 (P) Group II intron splicing URS000080DD74 RF02012
    RF00029    		 Pylaiella
    littoralis
    2885    		 25252982 Assembly1
    rna:B:1~14 121~122,205~207,209,254~261,29
    3~295,551~552
    2225 4r0d:B
    (3.676Å)
    		 14 N/A URS000080E2B8 N/A Pylaiella
    littoralis
    2885    		 25252982 Assembly1
    rna:A:1~622 2,4~14
    2226 4r4p:A
    (3.07Å)
    		 186 N/A URS000086851B N/A Neurospora
    5140    		 26414446 Assembly1
    rna:A-2:600~785 619~623,629~633,638~640,653~65
    5,657,692~694,696~697,724~726,
    739~741,748~751,765~768
    2227 4r4v:A
    (3.07Å)
    		 186 N/A URS0000868529 N/A Neurospora
    5140    		 26414446 Assembly1
    rna:A-2:600~785 621~623,629~633,639,653~655,65
    7,692~694,696~697,725,739~740,
    748,750~751,754,765~767
    2228 4rbq:A
    (1.05Å)
    		 32 N/A URS00008FED44 N/A synthetic
    construct
    32630    		 25352146 Assembly1
    rna:A-2:1~32 1~32
    2229 4rby:A
    (1.19Å)
    		 12 N/A URS000080E0B7 N/A synthetic
    construct
    32630    		 N/A Assembly1
    rna:A-2:101~112 101~112
    2230 4rbz:A
    (1.18Å)
    		 12 N/A URS0000868561 N/A synthetic
    construct
    32630    		 N/A Assembly1
    rna:A-2:101~112 101~112
    2231 4rc0:A
    (1.13Å)
    		 12 N/A URS000080E0B7 N/A synthetic
    construct
    32630    		 N/A Assembly1
    rna:A-2:101~112 101~105,108~112
    2232 4rmo:B
    (2.2Å)
    		 45 N/A URS000086854B N/A synthetic
    construct
    32630    		 26350213 Assembly1
    rna:F:1~45 1,45
    2233 4rmo:D
    (2.2Å)
    		 45 N/A URS000086854B N/A synthetic
    construct
    32630    		 26350213 Assembly2
    rna:H:1~45 1,45
    2234 4rmo:F
    (2.2Å)
    		 45 N/A URS000086854B N/A synthetic
    construct
    32630    		 26350213 Assembly1
    rna:B:1~45 1,45
    2235 4rmo:H
    (2.2Å)
    		 45 N/A URS000086854B N/A synthetic
    construct
    32630    		 26350213 Assembly2
    rna:D:1~45 1,45
    2236 4rmo:J
    (2.2Å)
    		 45 N/A URS000086854B N/A synthetic
    construct
    32630    		 26350213 Assembly3
    rna:L:1~45 1,45
    2237 4rmo:L
    (2.2Å)
    		 45 N/A URS000086854B N/A synthetic
    construct
    32630    		 26350213 Assembly3
    rna:J:1~45 1,45
    2238 4rmo:N
    (2.2Å)
    		 45 N/A URS000086854B N/A synthetic
    construct
    32630    		 26350213 Assembly4
    rna:P:1~45 1,45
    2239 4rmo:P
    (2.2Å)
    		 45 N/A URS000086854B N/A synthetic
    construct
    32630    		 26350213 Assembly4
    rna:N:1~45 1,45
    2240 4rwn:B
    (2.0Å)
    		 19 N/A URS00008116AE N/A synthetic
    construct
    32630    		 25892109 Assembly1
    rna:C:1~19 1~19
    2241 4rwn:C
    (2.0Å)
    		 19 N/A URS00008116A9 N/A synthetic
    construct
    32630    		 25892109 Assembly1
    rna:B:1~19 1~19
    2242 4rwo:B
    (2.2Å)
    		 19 N/A URS00008116AE N/A synthetic
    construct
    32630    		 25892109 Assembly1
    rna:C:1~19 1~19
    2243 4rwo:C
    (2.2Å)
    		 19 N/A URS00008116A9 N/A synthetic
    construct
    32630    		 25892109 Assembly1
    rna:B:1~19 1~19
    2244 4rwp:B
    (2.25Å)
    		 19 N/A URS00008116AE N/A synthetic
    construct
    32630    		 25892109 Assembly1
    rna:C:2~19 1~18
    2245 4rwp:C
    (2.25Å)
    		 18 N/A URS00008116A9 N/A synthetic
    construct
    32630    		 25892109 Assembly1
    rna:B:1~19 2~19
    2246 4s3n:B
    (2.0Å)
    		 19 N/A URS00008116AE N/A synthetic
    construct
    32630    		 25775560 Assembly1
    rna:C:1~19 1~19
    2247 4s3n:C
    (2.0Å)
    		 19 N/A URS00008116A9 N/A synthetic
    construct
    32630    		 25775560 Assembly1
    rna:B:1~19 1~19
    2248 4ts0:X
    (2.8Å)
    		 44 N/A URS000080DEC5 N/A synthetic
    construct
    32630    		 25026079 Assembly1
    rna:Y:49~101 1~10,12,14,17~26,28~44
    2249 4ts0:Y
    (2.8Å)
    		 47 N/A URS000080DEDB N/A synthetic
    construct
    32630    		 25026079 Assembly1
    rna:X:1~44 49~57,59~61,63~66,68,70,72,74~
    82,84~94,101
    2250 4ts2:X
    (2.884Å)
    		 44 N/A URS000080DEC5 N/A synthetic
    construct
    32630    		 25026079 Assembly1
    rna:Y:49~101 1,3~10,12,14,17~26,28~43
    2251 4ts2:Y
    (2.884Å)
    		 47 N/A URS000080DEDB N/A synthetic
    construct
    32630    		 25026079 Assembly1
    rna:X:1~44 50~57,59~60,63~66,68,70,72,74~
    82,84~93,101
    2252 4tua:QA
    (3.6Å)
    		 1500 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E226 RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 25352689 Assembly1
    rna:QV:0~76 790,966,1229~1230,1338~1341,14
    00
    rna:QX:15~25 530,926,1196,1397,1400~1402,14
    92~1493,1498,1505
    rna:QY:28~42 530,1054,1493
    rna:RA:6~2897 702,783~784,899,1407~1409,1418
    ,1429,1443,1473~1475,1483~1484
    ,1494~1496,1517
    2253 4tua:QV
    (3.6Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    str.
    K-12
    substr.
    DH10B
    316385    		 25352689 Assembly1
    rna:QA:5~1531 30~32,34,38,40~41
    rna:QX:15~25 34~37
    rna:RA:6~2897 10~12,24~25,74~76
    2254 4tua:QX
    (3.6Å)
    		 11 N/A N/A N/A synthetic
    construct
    32630    		 25352689 Assembly1
    rna:QA:5~1531 15~23
    rna:QV:0~76 16~18
    rna:QY:28~42 19~21
    2255 4tua:QY
    (3.6Å)
    		 15 N/A URS00008116B9 N/A synthetic
    construct
    32630    		 25352689 Assembly1
    rna:QA:5~1531 34~37
    rna:QX:15~25 34~37
    rna:RA:6~2897 37~38
    2256 4tua:RA
    (3.6Å)
    		 2882 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001698E8 RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    HB8
    300852    		 25352689 Assembly1
    rna:QA:5~1531 1689,1701~1704,1832,1836~1837,
    1846,1848,1895,1912~1913,1915~
    1916,1919~1920,1947~1949,1959~
    1961,2863~2864
    rna:QV:0~76 1907~1909,1922~1924,2063,2251~
    2253,2450~2451,2601~2602
    rna:RB:1~119 861~864,915~919,958
    rna:Z5:74~101 2451~2452,2504,2506~2507,2553~
    2555,2583~2585,2602
    2257 4tua:RB
    (3.6Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00005F2F4B RF00001 Thermus
    thermophilus
    HB8
    300852    		 25352689 Assembly1
    rna:RA:6~2897 78~81,89A,96~100
    2258 4tua:XA
    (3.6Å)
    		 1500 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E226 RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 25352689 Assembly2
    rna:XV:0~76 790,966,1229~1230,1338~1341,14
    00
    rna:XX:15~25 530,926,1196,1400~1401,1492~14
    93,1498
    rna:XY:28~43 530~531,1054,1493
    rna:YA:6~2897 702,783~784,899,1407~1409,1418
    ,1429,1443,1473~1474,1483~1484
    ,1494~1496,1517
    2259 4tua:XV
    (3.6Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    str.
    K-12
    substr.
    DH10B
    316385    		 25352689 Assembly2
    rna:XA:5~1531 30~32,34,38,40~41
    rna:XX:15~25 34~37
    rna:YA:6~2897 10~12,24~25,74~76
    2260 4tua:XX
    (3.6Å)
    		 11 N/A N/A N/A synthetic
    construct
    32630    		 25352689 Assembly2
    rna:XA:5~1531 15~21,23
    rna:XV:0~76 16~18
    rna:XY:28~43 19~22
    2261 4tua:XY
    (3.6Å)
    		 16 N/A URS00008116B9 N/A synthetic
    construct
    32630    		 25352689 Assembly2
    rna:XA:5~1531 34~37
    rna:XX:15~25 34~37
    2262 4tua:YA
    (3.6Å)
    		 2882 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001698E8 RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    HB8
    300852    		 25352689 Assembly2
    rna:XA:5~1531 1701~1704,1832,1836~1837,1846,
    1848,1895,1912~1913,1915~1916,
    1919~1920,1947~1949,1959~1961,
    2863~2864
    rna:XV:0~76 1908~1909,1922~1924,2064,2251~
    2253,2450~2451,2601~2602
    rna:YB:1~119 861~864,917~919,958
    rna:Z6:74~101 2451~2452,2504,2506~2507,2553~
    2555,2583~2585,2602
    2263 4tua:YB
    (3.6Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00005F2F4B RF00001 Thermus
    thermophilus
    HB8
    300852    		 25352689 Assembly2
    rna:YA:6~2897 78~81,89A,96~97,99~101
    2264 4tub:QA
    (3.6Å)
    		 1500 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E226 RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 25352689 Assembly1
    rna:QV:0~76 790,966,1229~1230,1338~1340,14
    00
    rna:QX:15~23 926,1196,1397,1400~1402,1492~1
    493,1498
    rna:QY:28~43 530~531,1054,1493
    rna:RA:6~2906 702,783~784,899,1407~1409,1418
    ,1429~1430,1443,1473~1475,1483
    ~1484,1494~1496,1517
    2265 4tub:QV
    (3.6Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    str.
    K-12
    substr.
    MC4100
    1403831    		 25352689 Assembly1
    rna:QA:5~1531 30~32,34,38~41
    rna:QX:15~23 34~37
    rna:RA:6~2906 10~12,24~25,74~76
    2266 4tub:QY
    (3.6Å)
    		 16 N/A URS00008116B9 N/A Escherichia
    coli
    str.
    K-12
    substr.
    MC4100
    1403831    		 25352689 Assembly1
    rna:QA:5~1531 34~37
    rna:QX:15~23 34~37
    rna:RA:6~2906 37~38
    2267 4tub:RA
    (3.6Å)
    		 2882 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001698E8 RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    HB8
    300852    		 25352689 Assembly1
    rna:QA:5~1531 1736,1747~1751,1863,1867~1868,
    1877,1879,1934~1935,1937~1938,
    1941~1942,1969~1970,1981~1983,
    2873~2874
    rna:QV:0~76 1929~1931,1944~1946,2263~2265,
    2462~2463,2613~2614
    rna:RB:1~119 908~911,962~964,1003
    rna:Z5:74~101 2463~2464,2518~2519,2565,2567,
    2595~2597,2614
    2268 4tub:RB
    (3.6Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00005F2F4B RF00001 Thermus
    thermophilus
    HB8
    300852    		 25352689 Assembly1
    rna:RA:6~2906 78~80,89A,97,99~100
    2269 4tub:XA
    (3.6Å)
    		 1500 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E226 RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 25352689 Assembly2
    rna:XV:0~76 790,966,1229~1230,1338~1340,14
    00
    rna:XX:15~24 530,926,1196,1397,1400~1401,14
    92~1493,1498
    rna:XY:28~43 530~531,1054,1493
    rna:YA:6~2897 702,783~784,899~900,1407~1409,
    1418,1429,1443,1473~1475,1483~
    1484,1494~1496,1517
    2270 4tub:XV
    (3.6Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    str.
    K-12
    substr.
    MC4100
    1403831    		 25352689 Assembly2
    rna:XA:5~1531 30~32,34,38,40~41
    rna:XX:15~24 34~37
    rna:YA:6~2897 2,10~12,24~25,74~76
    2271 4tub:XX
    (3.6Å)
    		 10 N/A N/A N/A synthetic
    construct
    32630    		 25352689 Assembly2
    rna:XA:5~1531 16~21,23
    rna:XV:0~76 16~18
    rna:XY:28~43 19~21
    2272 4tub:XY
    (3.6Å)
    		 16 N/A URS00008116B9 N/A Escherichia
    coli
    str.
    K-12
    substr.
    MC4100
    1403831    		 25352689 Assembly2
    rna:XA:5~1531 34~37
    rna:XX:15~24 34~37
    rna:YA:6~2897 37~38
    2273 4tub:YA
    (3.6Å)
    		 2882 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001698E8 RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    HB8
    300852    		 25352689 Assembly2
    rna:XA:5~1531 1689,1700~1704,1832,1836~1837,
    1846,1848,1912~1913,1915~1916,
    1919~1920,1947~1949,1959~1961,
    2864
    rna:XV:0~76 1908~1909,1922~1924,2064,2251~
    2253,2255,2450~2451,2601~2602
    rna:YB:1~119 861~864,915~919,958
    rna:Z6:74~101 2451~2452,2504,2506~2507,2553~
    2555,2583~2585,2602
    2274 4tub:YB
    (3.6Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00005F2F4B RF00001 Thermus
    thermophilus
    HB8
    300852    		 25352689 Assembly2
    rna:YA:6~2897 78~81,89A,96~97,99~101
    2275 4tuc:QA
    (3.6Å)
    		 1500 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E226 RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 25352689 Assembly1
    rna:QV:0~76 790,966,1229~1230,1338~1341,14
    00
    rna:QX:15~25 926,1196,1397,1400~1402,1492~1
    493,1498
    rna:QY:29~43 530,1054,1493
    rna:RA:6~2897 702,783~784,899,1407~1409,1418
    ,1429,1443,1473~1475,1483~1484
    ,1493~1496,1517
    2276 4tuc:QV
    (3.6Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    str.
    K-12
    substr.
    MC4100
    1403831    		 25352689 Assembly1
    rna:QA:5~1531 30~32,34,38,40~41
    rna:QX:15~25 34~37
    rna:RA:6~2897 10~12,24~25,74~76
    2277 4tuc:QX
    (3.6Å)
    		 11 N/A N/A N/A synthetic
    construct
    32630    		 25352689 Assembly1
    rna:QA:5~1531 16~20,22~23
    rna:QV:0~76 16~18
    rna:QY:29~43 19~21
    2278 4tuc:QY
    (3.6Å)
    		 15 N/A URS00008116C4 N/A synthetic
    construct
    32630    		 25352689 Assembly1
    rna:QA:5~1531 35~38
    rna:QX:15~25 35~38
    rna:RA:6~2897 38~39
    2279 4tuc:RA
    (3.6Å)
    		 2882 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001698E8 RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    HB8
    300852    		 25352689 Assembly1
    rna:QA:5~1531 1700~1704,1832,1836~1837,1846,
    1848,1895,1912~1913,1915~1916,
    1919~1920,1947~1949,1959~1961,
    2863~2864
    rna:QV:0~76 1907~1909,1922~1924,2251~2253,
    2450~2451,2601~2602
    rna:RB:1~119 861~863,915~918,958
    rna:Z5:74~101 2451~2452,2506~2507,2553,2555,
    2573,2583~2585,2602
    2280 4tuc:RB
    (3.6Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00005F2F4B RF00001 Thermus
    thermophilus
    HB8
    300852    		 25352689 Assembly1
    rna:RA:6~2897 78~80,89A,97~100
    2281 4tuc:XA
    (3.6Å)
    		 1500 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E226 RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 25352689 Assembly2
    rna:XV:0~76 790,966,1229~1230,1338~1341,14
    00
    rna:XX:15~24 530,926,1196,1397,1400~1401,14
    92~1493,1498
    rna:XY:29~43 530~531,1054,1493
    rna:YA:6~2897 702,784,899,1407~1409,1418,142
    9~1430,1443,1473~1475,1483~148
    4,1494~1496,1517
    2282 4tuc:XV
    (3.6Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    str.
    K-12
    substr.
    MC4100
    1403831    		 25352689 Assembly2
    rna:XA:5~1531 30~32,34,38,40~41
    rna:XX:15~24 34~37
    rna:YA:6~2897 10~11,24~25,74~76
    2283 4tuc:XX
    (3.6Å)
    		 10 N/A N/A N/A synthetic
    construct
    32630    		 25352689 Assembly2
    rna:XA:5~1531 16~23
    rna:XV:0~76 16~18
    rna:XY:29~43 19~22
    2284 4tuc:XY
    (3.6Å)
    		 15 N/A URS00008116C4 N/A synthetic
    construct
    32630    		 25352689 Assembly2
    rna:XA:5~1531 35~38
    rna:XX:15~24 35~38
    2285 4tuc:YA
    (3.6Å)
    		 2882 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001698E8 RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    HB8
    300852    		 25352689 Assembly2
    rna:XA:5~1531 1689,1701~1704,1832,1836~1837,
    1848,1895,1912~1913,1915~1916,
    1919~1920,1947~1948,1959~1961,
    2863~2864
    rna:XV:0~76 1908~1909,1922~1924,2064,2251~
    2253,2450~2451,2601~2602
    rna:YB:1~119 861~864,915,917~919,958
    rna:Z6:74~101 2061,2451~2452,2506~2507,2553,
    2555,2583~2585,2602
    2286 4tuc:YB
    (3.6Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00005F2F4B RF00001 Thermus
    thermophilus
    HB8
    300852    		 25352689 Assembly2
    rna:YA:6~2897 78~81,89A,96~100
    2287 4tud:QA
    (3.6Å)
    		 1500 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E226 RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 25352689 Assembly1
    rna:QV:0~76 790,966,1229~1230,1338~1341,14
    00
    rna:QX:15~23 530,926,1400~1402,1492~1493,14
    98,1505
    rna:QY:29~43 530,1054,1493
    rna:RA:6~2897 702,784,899,1407~1409,1418,142
    9,1443,1473~1475,1483~1484,149
    4~1496,1517
    2288 4tud:QV
    (3.6Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    str.
    K-12
    substr.
    MC4100
    1403831    		 25352689 Assembly1
    rna:QA:5~1531 29~32,34,38,40~41
    rna:QX:15~23 34~37
    rna:RA:6~2897 10~12,24~25,74~76
    2289 4tud:QY
    (3.6Å)
    		 15 N/A URS00008116C4 N/A synthetic
    construct
    32630    		 25352689 Assembly1
    rna:QA:5~1531 35~38
    rna:QX:15~23 35~38
    rna:RA:6~2897 38~39
    2290 4tud:RA
    (3.6Å)
    		 2882 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001698E8 RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    HB8
    300852    		 25352689 Assembly1
    rna:QA:5~1531 1689,1700~1704,1832,1836~1837,
    1846,1848,1912~1913,1915~1916,
    1919~1920,1947~1949,1959~1961,
    2863~2864
    rna:QV:0~76 1907,1909,1922~1924,2251~2253,
    2450~2451,2601~2602
    rna:RB:1~119 861~864,915~919,958
    rna:Z5:74~101 2451~2452,2506~2507,2553~2555,
    2583~2585,2602
    2291 4tud:RB
    (3.6Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00005F2F4B RF00001 Thermus
    thermophilus
    HB8
    300852    		 25352689 Assembly1
    rna:RA:6~2897 78~81,89A,96~100
    2292 4tud:XA
    (3.6Å)
    		 1500 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E226 RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 25352689 Assembly2
    rna:XV:0~76 790,966,1229~1230,1338~1341,14
    00
    rna:XX:15~23 530,926,1397,1400~1401,1492~14
    93,1498,1506
    rna:XY:29~43 530~531,1054,1493
    rna:YA:6~2897 702,783~784,899,1407~1409,1418
    ,1429,1443,1473~1475,1483~1484
    ,1494~1496,1517
    2293 4tud:XV
    (3.6Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    str.
    K-12
    substr.
    MC4100
    1403831    		 25352689 Assembly2
    rna:XA:5~1531 30~32,34,38,40~41
    rna:XX:15~23 34~37
    rna:YA:6~2897 10~12,24~25,74~76
    2294 4tud:XY
    (3.6Å)
    		 15 N/A URS00008116C4 N/A synthetic
    construct
    32630    		 25352689 Assembly2
    rna:XA:5~1531 35~38
    rna:XX:15~23 35~38
    rna:YA:6~2897 38~39
    2295 4tud:YA
    (3.6Å)
    		 2882 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001698E8 RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    HB8
    300852    		 25352689 Assembly2
    rna:XA:5~1531 1689,1701~1704,1832,1836~1837,
    1846,1848,1912~1913,1915~1916,
    1919~1920,1947~1949,1959~1961,
    2863~2864
    rna:XV:0~76 1909,1922~1924,2064,2251~2253,
    2450~2451,2602
    rna:YB:1~119 861~864,917~919,958
    rna:Z6:74~101 2061,2451~2452,2504,2506~2507,
    2553~2555,2583~2585,2602
    2296 4tud:YB
    (3.6Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00005F2F4B RF00001 Thermus
    thermophilus
    HB8
    300852    		 25352689 Assembly2
    rna:YA:6~2897 78~81,89A,96~97,99~100
    2297 4tue:QA
    (3.5Å)
    		 1500 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E226 RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 25352689 Assembly1
    rna:QV:0~76 790,966,1229~1230,1338~1340,14
    00
    rna:QX:15~23 530,926,1397,1400~1402,1492~14
    93,1498,1505
    rna:QY:29~43 530,1054,1493
    rna:RA:6~2897 702,783~784,899,1407~1409,1418
    ,1429,1443,1473~1475,1483~1484
    ,1494~1496,1517
    2298 4tue:QV
    (3.5Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Vittia
    pachyloma
    181333    		 25352689 Assembly1
    rna:QA:5~1531 29~32,34,38~41
    rna:QX:15~23 34~37
    rna:RA:6~2897 10~12,24~25,74~76
    2299 4tue:QY
    (3.5Å)
    		 15 N/A URS00008116C4 N/A synthetic
    construct
    32630    		 25352689 Assembly1
    rna:QA:5~1531 35~38
    rna:QX:15~23 35~38
    rna:RA:6~2897 38~39
    2300 4tue:RA
    (3.5Å)
    		 2882 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001698E8 RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    HB8
    300852    		 25352689 Assembly1
    rna:QA:5~1531 1689,1700~1704,1832,1836~1837,
    1846,1848,1912~1913,1915~1916,
    1919~1920,1947~1949,1959~1961,
    2863~2864
    rna:QV:0~76 1907~1909,1922~1924,2251~2253,
    2450~2451,2601~2602
    rna:RB:1~119 861~864,917~919,958
    rna:Z5:74~101 2061,2451~2452,2506~2507,2553~
    2555,2583~2585,2602
    << < 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 > >>
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    Reference:
  • Chengxin Zhang, Lydia Freddolino (2024) "FURNA: a database for function annotations of RNA structures," PLOS Biology 22(7): e3002476.