SEQ2FUN

FURNA
Download all results in tab-seperated text for 16611 RNAs.
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  • Hover over Ligand to view the name of the ligand and the ligand-binding nucleotides on the RNA.

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    # PDB
    (Resolution)    		 Length EC number
    & GO term     		RNAcentral Rfam Taxon PubMed ATtRACT
    motif     		Ligand &
    binding nucleotides
    2301 4tuc:XX
    (3.6Å)
    		 10 N/A N/A N/A synthetic
    construct
    32630    		 25352689 Assembly2
    rna:XA:5~1531 16~23
    rna:XV:0~76 16~18
    rna:XY:29~43 19~22
    2302 4tuc:XY
    (3.6Å)
    		 15 N/A URS00008116C4 N/A synthetic
    construct
    32630    		 25352689 Assembly2
    rna:XA:5~1531 35~38
    rna:XX:15~24 35~38
    2303 4tuc:YA
    (3.6Å)
    		 2882 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001698E8 RF02541 Thermus
    thermophilus
    HB8
    300852    		 25352689 Assembly2
    rna:XA:5~1531 1689,1701~1704,1832,1836~1837,
    1848,1895,1912~1913,1915~1916,
    1919~1920,1947~1948,1959~1961,
    2863~2864
    rna:XV:0~76 1908~1909,1922~1924,2064,2251~
    2253,2450~2451,2601~2602
    rna:YB:1~119 861~864,915,917~919,958
    rna:Z6:74~101 2061,2451~2452,2506~2507,2553,
    2555,2583~2585,2602
    2304 4tuc:YB
    (3.6Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00005F2F4B RF00001 Thermus
    thermophilus
    HB8
    300852    		 25352689 Assembly2
    rna:YA:6~2897 78~81,89A,96~100
    2305 4tud:QA
    (3.6Å)
    		 1500 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E226 RF00177 Thermus
    thermophilus
    HB8
    300852    		 25352689 Assembly1
    rna:QV:0~76 790,966,1229~1230,1338~1341,14
    00
    rna:QX:15~23 530,926,1400~1402,1492~1493,14
    98,1505
    rna:QY:29~43 530,1054,1493
    rna:RA:6~2897 702,784,899,1407~1409,1418,142
    9,1443,1473~1475,1483~1484,149
    4~1496,1517
    2306 4tud:QV
    (3.6Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    str.
    K-12
    substr.
    MC4100
    1403831    		 25352689 Assembly1
    rna:QA:5~1531 29~32,34,38,40~41
    rna:QX:15~23 34~37
    rna:RA:6~2897 10~12,24~25,74~76
    2307 4tud:QY
    (3.6Å)
    		 15 N/A URS00008116C4 N/A synthetic
    construct
    32630    		 25352689 Assembly1
    rna:QA:5~1531 35~38
    rna:QX:15~23 35~38
    rna:RA:6~2897 38~39
    2308 4tud:RA
    (3.6Å)
    		 2882 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001698E8 RF02541 Thermus
    thermophilus
    HB8
    300852    		 25352689 Assembly1
    rna:QA:5~1531 1689,1700~1704,1832,1836~1837,
    1846,1848,1912~1913,1915~1916,
    1919~1920,1947~1949,1959~1961,
    2863~2864
    rna:QV:0~76 1907,1909,1922~1924,2251~2253,
    2450~2451,2601~2602
    rna:RB:1~119 861~864,915~919,958
    rna:Z5:74~101 2451~2452,2506~2507,2553~2555,
    2583~2585,2602
    2309 4tud:RB
    (3.6Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00005F2F4B RF00001 Thermus
    thermophilus
    HB8
    300852    		 25352689 Assembly1
    rna:RA:6~2897 78~81,89A,96~100
    2310 4tud:XA
    (3.6Å)
    		 1500 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E226 RF00177 Thermus
    thermophilus
    HB8
    300852    		 25352689 Assembly2
    rna:XV:0~76 790,966,1229~1230,1338~1341,14
    00
    rna:XX:15~23 530,926,1397,1400~1401,1492~14
    93,1498,1506
    rna:XY:29~43 530~531,1054,1493
    rna:YA:6~2897 702,783~784,899,1407~1409,1418
    ,1429,1443,1473~1475,1483~1484
    ,1494~1496,1517
    2311 4tud:XV
    (3.6Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    str.
    K-12
    substr.
    MC4100
    1403831    		 25352689 Assembly2
    rna:XA:5~1531 30~32,34,38,40~41
    rna:XX:15~23 34~37
    rna:YA:6~2897 10~12,24~25,74~76
    2312 4tud:XY
    (3.6Å)
    		 15 N/A URS00008116C4 N/A synthetic
    construct
    32630    		 25352689 Assembly2
    rna:XA:5~1531 35~38
    rna:XX:15~23 35~38
    rna:YA:6~2897 38~39
    2313 4tud:YA
    (3.6Å)
    		 2882 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001698E8 RF02541 Thermus
    thermophilus
    HB8
    300852    		 25352689 Assembly2
    rna:XA:5~1531 1689,1701~1704,1832,1836~1837,
    1846,1848,1912~1913,1915~1916,
    1919~1920,1947~1949,1959~1961,
    2863~2864
    rna:XV:0~76 1909,1922~1924,2064,2251~2253,
    2450~2451,2602
    rna:YB:1~119 861~864,917~919,958
    rna:Z6:74~101 2061,2451~2452,2504,2506~2507,
    2553~2555,2583~2585,2602
    2314 4tud:YB
    (3.6Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00005F2F4B RF00001 Thermus
    thermophilus
    HB8
    300852    		 25352689 Assembly2
    rna:YA:6~2897 78~81,89A,96~97,99~100
    2315 4tue:QA
    (3.5Å)
    		 1500 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E226 RF00177 Thermus
    thermophilus
    HB8
    300852    		 25352689 Assembly1
    rna:QV:0~76 790,966,1229~1230,1338~1340,14
    00
    rna:QX:15~23 530,926,1397,1400~1402,1492~14
    93,1498,1505
    rna:QY:29~43 530,1054,1493
    rna:RA:6~2897 702,783~784,899,1407~1409,1418
    ,1429,1443,1473~1475,1483~1484
    ,1494~1496,1517
    2316 4tue:QV
    (3.5Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Vittia
    pachyloma
    181333    		 25352689 Assembly1
    rna:QA:5~1531 29~32,34,38~41
    rna:QX:15~23 34~37
    rna:RA:6~2897 10~12,24~25,74~76
    2317 4tue:QY
    (3.5Å)
    		 15 N/A URS00008116C4 N/A synthetic
    construct
    32630    		 25352689 Assembly1
    rna:QA:5~1531 35~38
    rna:QX:15~23 35~38
    rna:RA:6~2897 38~39
    2318 4tue:RA
    (3.5Å)
    		 2882 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001698E8 RF02541 Thermus
    thermophilus
    HB8
    300852    		 25352689 Assembly1
    rna:QA:5~1531 1689,1700~1704,1832,1836~1837,
    1846,1848,1912~1913,1915~1916,
    1919~1920,1947~1949,1959~1961,
    2863~2864
    rna:QV:0~76 1907~1909,1922~1924,2251~2253,
    2450~2451,2601~2602
    rna:RB:1~119 861~864,917~919,958
    rna:Z5:74~101 2061,2451~2452,2506~2507,2553~
    2555,2583~2585,2602
    2319 4tue:RB
    (3.5Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00005F2F4B RF00001 Thermus
    thermophilus
    HB8
    300852    		 25352689 Assembly1
    rna:RA:6~2897 78~81,89A,96~100
    2320 4tue:XA
    (3.5Å)
    		 1500 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E226 RF00177 Thermus
    thermophilus
    HB8
    300852    		 25352689 Assembly2
    rna:XV:0~76 790,966,1229,1338~1341,1400
    rna:XX:13~23 530,693,926,1196,1397,1400~140
    1,1492~1493,1498,1506
    rna:XY:29~43 530~531,1054,1493
    rna:YA:6~2897 702,783~784,899,1407~1409,1418
    ,1429,1443,1473~1475,1483~1484
    ,1493~1496,1517
    2321 4tue:XV
    (3.5Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Vittia
    pachyloma
    181333    		 25352689 Assembly2
    rna:XA:5~1531 30~32,34,38,40~41
    rna:XX:13~23 34~37
    rna:YA:6~2897 10~12,24~25,74~76
    2322 4tue:XX
    (3.5Å)
    		 11 N/A N/A N/A synthetic
    construct
    32630    		 25352689 Assembly2
    rna:XA:5~1531 13,15~21,23
    rna:XV:0~76 16~18
    rna:XY:29~43 19~22
    2323 4tue:XY
    (3.5Å)
    		 15 N/A URS00008116C4 N/A synthetic
    construct
    32630    		 25352689 Assembly2
    rna:XA:5~1531 35~38
    rna:XX:13~23 35~38
    rna:YA:6~2897 38~39
    2324 4tue:YA
    (3.5Å)
    		 2882 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001698E8 RF02541 Thermus
    thermophilus
    HB8
    300852    		 25352689 Assembly2
    rna:XA:5~1531 1689,1700~1704,1832,1836~1837,
    1846,1848,1912~1913,1915~1916,
    1919~1920,1947~1949,1959~1961,
    2863~2864
    rna:XV:0~76 1908~1909,1922~1924,2251~2253,
    2450~2451,2601~2602
    rna:YB:1~119 861~864,917~919,958
    rna:Z6:74~101 2061,2451~2452,2504,2506~2507,
    2553~2555,2573,2583~2585,2602
    2325 4tue:YB
    (3.5Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00005F2F4B RF00001 Thermus
    thermophilus
    HB8
    300852    		 25352689 Assembly2
    rna:YA:6~2897 78~81,89A,96~97,99~100
    2326 4tzp:B
    (8.503Å)
    		 70 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080DE51 RF00005 Bacillus
    subtilis
    1423    		 25185828
    23892783    		 Assembly1
    rna:C:1~102 18,33~35,55
    2327 4tzp:C
    (8.503Å)
    		 102 GO:0000049 (F) tRNA binding URS000080DF58 RF00230 Oceanobacillus
    iheyensis
    182710    		 25185828
    23892783    		 Assembly1
    rna:B:5~79 44,56,63,87~89
    2328 4tzp:E
    (8.503Å)
    		 75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080DE51 RF00005 Bacillus
    subtilis
    1423    		 25185828
    23892783    		 Assembly2
    rna:F:1~102 18,33~36,55
    2329 4tzp:F
    (8.503Å)
    		 102 GO:0000049 (F) tRNA binding URS000080DF58 RF00230 Oceanobacillus
    iheyensis
    182710    		 25185828
    23892783    		 Assembly2
    rna:E:5~79 44,56,63,87~89
    2330 4tzv:B
    (5.03Å)
    		 75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080DE51 RF00005 Bacillus
    subtilis
    1423    		 25185828
    23892783    		 Assembly1
    rna:C:1~102 18,33~36,55
    2331 4tzv:C
    (5.03Å)
    		 102 GO:0000049 (F) tRNA binding URS000080DF58 RF00230 Oceanobacillus
    iheyensis
    HTE831
    221109    		 25185828
    23892783    		 Assembly1
    rna:B:5~79 56,63,87~90
    2332 4tzw:B
    (4.671Å)
    		 75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080DE51 RF00005 Bacillus
    subtilis
    1423    		 25185828
    23892783    		 Assembly1
    rna:C:1~102 18,33~36,41,55
    2333 4tzw:C
    (4.671Å)
    		 102 GO:0000049 (F) tRNA binding URS000080DF58 RF00230 Oceanobacillus
    iheyensis
    HTE831
    221109    		 25185828
    23892783    		 Assembly1
    rna:B:5~79 34,44,56,63,87~90
    2334 4tzz:B
    (3.64Å)
    		 75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080DE51 RF00005 Bacillus
    subtilis
    1423    		 25185828 Assembly1
    rna:C:1~102 18,32~36,40~42,55
    2335 4tzz:C
    (3.64Å)
    		 102 GO:0000049 (F) tRNA binding URS000080DF58 RF00230 Oceanobacillus
    iheyensis
    182710    		 25185828 Assembly1
    rna:B:5~79 18~19,34,44,55~56,63,76,87~90
    2336 4tzz:E
    (3.64Å)
    		 75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080DE51 RF00005 Bacillus
    subtilis
    1423    		 25185828 Assembly2
    rna:F:1~102 18~19,33~36,41~42,55
    2337 4tzz:F
    (3.64Å)
    		 102 GO:0000049 (F) tRNA binding URS000080DF58 RF00230 Oceanobacillus
    iheyensis
    182710    		 25185828 Assembly2
    rna:E:5~79 34,44,55~56,63~64,87~90
    2338 4tzz:H
    (3.64Å)
    		 75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080DE51 RF00005 Bacillus
    subtilis
    1423    		 25185828 Assembly3
    rna:I:1~102 18~19,32~36,41~42,55
    2339 4tzz:I
    (3.64Å)
    		 102 GO:0000049 (F) tRNA binding URS000080DF58 RF00230 Oceanobacillus
    iheyensis
    182710    		 25185828 Assembly3
    rna:H:5~79 18~19,34,44,56,63~64,87~89
    2340 4tzz:K
    (3.64Å)
    		 75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080DE51 RF00005 Bacillus
    subtilis
    1423    		 25185828 Assembly4
    rna:L:1 18~19,32~36,40~42,55
    2341 4tzz:L
    (3.64Å)
    		 102 GO:0000049 (F) tRNA binding URS000080DF58 RF00230 Oceanobacillus
    iheyensis
    182710    		 25185828 Assembly4
    rna:K:5~79 19,34,44,56,63~64,76,87~90
    2342 4u1u:AA
    (2.95Å)
    		 1538 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DDC0 RF00177 Escherichia
    coli
    str.
    K-12
    substr.
    MDS42
    1110693    		 24957822 Assembly1
    rna:BA:1~2903 702,784,1407~1408,1418~1420,14
    29,1473~1475,1483~1484,1492,14
    94~1496,1517
    2343 4u1u:BA
    (2.95Å)
    		 2897 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E25C RF02541 Escherichia
    coli
    str.
    K-12
    substr.
    MDS42
    1110693    		 24957822 Assembly1
    rna:AA:2~1539 1689,1700~1704,1836~1837,1846,
    1912~1913,1919~1920,1947~1950,
    1959~1961
    rna:BB:1~119 861~864,915,917~919,958
    2344 4u1u:BB
    (2.95Å)
    		 119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E133 RF00001 Escherichia
    coli
    str.
    K-12
    substr.
    MDS42
    1110693    		 24957822 Assembly1
    rna:BA:1~2903 78~81,89~90,96~97,99~100
    2345 4u1u:CA
    (2.95Å)
    		 1539 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DDC0 RF00177 Escherichia
    coli
    str.
    K-12
    substr.
    MDS42
    1110693    		 24957822 Assembly2
    rna:DA:1~2903 702,783~784,899,1407~1409,1418
    ,1428~1429,1473~1475,1483~1484
    ,1492,1517
    2346 4u1u:DA
    (2.95Å)
    		 2897 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E25C RF02541 Escherichia
    coli
    str.
    K-12
    substr.
    MDS42
    1110693    		 24957822 Assembly2
    rna:CA:2~1540 1686~1687,1689,1700~1703,1832,
    1836~1837,1848,1912~1913,1915~
    1916,1919~1920,1947~1948,1959~
    1961
    rna:DB:2~119 861~864,915,917~919,958
    2347 4u1u:DB
    (2.95Å)
    		 118 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E133 RF00001 Escherichia
    coli
    str.
    K-12
    substr.
    MDS42
    1110693    		 24957822 Assembly2
    rna:DA:1~2903 78~81,89,96~97,99~100
    2348 4u1v:AA
    (3.0Å)
    		 1538 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DDC0 RF00177 Escherichia
    coli
    str.
    K-12
    substr.
    MDS42
    1110693    		 24957822 Assembly1
    rna:BA:1~2903 702,899,1407~1409,1418,1420,14
    29,1473~1475,1483~1484,1492,14
    94~1496,1517
    2349 4u1v:BA
    (3.0Å)
    		 2897 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E25C RF02541 Escherichia
    coli
    str.
    K-12
    substr.
    MDS42
    1110693    		 24957822 Assembly1
    rna:AA:2~1539 1689,1700~1704,1832,1846~1847,
    1912~1913,1919~1920,1947~1950,
    1959~1961
    rna:BB:1~119 861~863,915,917~919,958
    2350 4u1v:BB
    (3.0Å)
    		 119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E133 RF00001 Escherichia
    coli
    str.
    K-12
    substr.
    MDS42
    1110693    		 24957822 Assembly1
    rna:BA:1~2903 78~81,89,96~97,99~100
    2351 4u1v:CA
    (3.0Å)
    		 1539 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DDC0 RF00177 Escherichia
    coli
    str.
    K-12
    substr.
    MDS42
    1110693    		 24957822 Assembly2
    rna:DA:1~2903 702,783~784,899,1407~1409,1418
    ~1420,1428~1429,1473~1475,1483
    ~1484,1492~1495,1517
    2352 4u1v:DA
    (3.0Å)
    		 2897 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E25C RF02541 Escherichia
    coli
    str.
    K-12
    substr.
    MDS42
    1110693    		 24957822 Assembly2
    rna:CA:2~1540 1686,1689,1700~1704,1832,1836~
    1837,1846,1848,1912~1916,1919~
    1920,1947~1950,1959~1961
    rna:DB:2~119 861~864,915,917~918,958
    2353 4u1v:DB
    (3.0Å)
    		 118 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E133 RF00001 Escherichia
    coli
    str.
    K-12
    substr.
    MDS42
    1110693    		 24957822 Assembly2
    rna:DA:1~2903 78~80,89,96~97,99~100
    2354 4u20:AA
    (2.9Å)
    		 1538 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DDC0 RF00177 Escherichia
    coli
    str.
    K-12
    substr.
    MDS42
    1110693    		 24957822 Assembly1
    rna:BA:1~2903 702,1407~1408,1418~1420,1429,1
    473~1475,1483~1484,1492,1494~1
    495,1517
    2355 4u20:BA
    (2.9Å)
    		 2897 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E25C RF02541 Escherichia
    coli
    str.
    K-12
    substr.
    MDS42
    1110693    		 24957822 Assembly1
    rna:AA:2~1539 1689,1700~1704,1846~1847,1912~
    1913,1919~1920,1947~1950,1959~
    1961
    rna:BB:1~119 861~864,915,917~919,958
    2356 4u20:BB
    (2.9Å)
    		 119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E133 RF00001 Escherichia
    coli
    str.
    K-12
    substr.
    MDS42
    1110693    		 24957822 Assembly1
    rna:BA:1~2903 78~81,89,96~97,99~100
    2357 4u20:CA
    (2.9Å)
    		 1539 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DDC0 RF00177 Escherichia
    coli
    str.
    K-12
    substr.
    MDS42
    1110693    		 24957822 Assembly2
    rna:DA:1~2903 702,783~784,899,1407~1409,1418
    ,1428~1429,1473~1475,1483~1484
    ,1492~1495,1517
    2358 4u20:DA
    (2.9Å)
    		 2897 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E25C RF02541 Escherichia
    coli
    str.
    K-12
    substr.
    MDS42
    1110693    		 24957822 Assembly2
    rna:CA:2~1540 1686,1689,1700~1704,1832,1836~
    1837,1846,1848,1912~1913,1915~
    1916,1919~1920,1947~1948,1959~
    1960
    rna:DB:2~119 861~864,915,917~919,958
    2359 4u20:DB
    (2.9Å)
    		 118 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E133 RF00001 Escherichia
    coli
    str.
    K-12
    substr.
    MDS42
    1110693    		 24957822 Assembly2
    rna:DA:1~2903 78~81,89,96~97,99~100
    2360 4u24:AA
    (2.9Å)
    		 1538 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DDC0 RF00177 Escherichia
    coli
    str.
    K-12
    substr.
    MDS42
    1110693    		 24957822 Assembly1
    rna:BA:1~2903 702,899,1407~1408,1418,1420,14
    28~1429,1473~1475,1483~1484,14
    92,1494~1496,1517
    2361 4u24:BA
    (2.9Å)
    		 2897 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E25C RF02541 Escherichia
    coli
    str.
    K-12
    substr.
    MDS42
    1110693    		 24957822 Assembly1
    rna:AA:2~1539 1689,1700~1704,1832,1846~1847,
    1912~1913,1916,1919~1920,1947~
    1948,1950,1959~1961
    rna:BB:1~119 861~864,915,917~919,958
    2362 4u24:BB
    (2.9Å)
    		 119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E133 RF00001 Escherichia
    coli
    str.
    K-12
    substr.
    MDS42
    1110693    		 24957822 Assembly1
    rna:BA:1~2903 78~81,89,96~97,99~100
    2363 4u24:CA
    (2.9Å)
    		 1539 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DDC0 RF00177 Escherichia
    coli
    str.
    K-12
    substr.
    MDS42
    1110693    		 24957822 Assembly2
    rna:DA:1~2903 702,783~784,899,1407~1409,1418
    ,1428~1429,1473~1475,1483~1484
    ,1492~1495,1517
    2364 4u24:DA
    (2.9Å)
    		 2897 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E25C RF02541 Escherichia
    coli
    str.
    K-12
    substr.
    MDS42
    1110693    		 24957822 Assembly2
    rna:CA:2~1540 1686,1689,1700~1704,1832,1836~
    1837,1846,1848,1912~1916,1919~
    1920,1947~1948,1959~1961
    rna:DB:2~119 861~863,915~918,958,2340
    2365 4u24:DB
    (2.9Å)
    		 118 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E133 RF00001 Escherichia
    coli
    str.
    K-12
    substr.
    MDS42
    1110693    		 24957822 Assembly2
    rna:DA:1~2903 41,78~80,89,97,99~100
    2366 4u25:AA
    (2.9Å)
    		 1538 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DDC0 RF00177 Escherichia
    coli
    str.
    K-12
    substr.
    MDS42
    1110693    		 24957822 Assembly1
    rna:BA:1~2903 702,784,899,1407~1408,1418~142
    0,1429,1473~1475,1483~1484,149
    2,1494~1496,1517
    2367 4u25:BA
    (2.9Å)
    		 2897 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E25C RF02541 Escherichia
    coli
    str.
    K-12
    substr.
    MDS42
    1110693    		 24957822 Assembly1
    rna:AA:2~1539 1689,1700~1704,1832,1837,1846~
    1847,1912~1913,1916,1919~1920,
    1947~1950,1959~1960
    rna:BB:1~119 861~864,915,917~919,958
    2368 4u25:BB
    (2.9Å)
    		 119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E133 RF00001 Escherichia
    coli
    str.
    K-12
    substr.
    MDS42
    1110693    		 24957822 Assembly1
    rna:BA:1~2903 78~81,89,96~97,99~100
    2369 4u25:CA
    (2.9Å)
    		 1539 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DDC0 RF00177 Escherichia
    coli
    str.
    K-12
    substr.
    MDS42
    1110693    		 24957822 Assembly2
    rna:DA:1~2903 702,783~784,899,1407~1409,1418
    ,1420,1428~1429,1473~1475,1483
    ~1484,1492~1495,1517
    2370 4u25:DA
    (2.9Å)
    		 2897 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E25C RF02541 Escherichia
    coli
    str.
    K-12
    substr.
    MDS42
    1110693    		 24957822 Assembly2
    rna:CA:2~1540 1686,1689,1700~1704,1832,1836~
    1837,1846,1848,1912~1913,1915~
    1916,1919~1920,1947~1948,1950,
    1959~1961
    rna:DB:2~119 861~863,915,917~919
    2371 4u25:DB
    (2.9Å)
    		 118 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E133 RF00001 Escherichia
    coli
    str.
    K-12
    substr.
    MDS42
    1110693    		 24957822 Assembly2
    rna:DA:1~2903 78~80,96~97,99~100
    2372 4u26:AA
    (2.8Å)
    		 1538 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DDC0 RF00177 Escherichia
    coli
    str.
    K-12
    substr.
    MDS42
    1110693    		 24957822 Assembly1
    rna:BA:1~2903 702,783~784,1407~1408,1418~142
    0,1428~1429,1473~1475,1483~148
    4,1492,1494~1496,1517
    2373 4u26:BA
    (2.8Å)
    		 2897 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E25C RF02541 Escherichia
    coli
    str.
    K-12
    substr.
    MDS42
    1110693    		 24957822 Assembly1
    rna:AA:2~1539 1689,1700~1704,1836,1846~1847,
    1912~1913,1919~1920,1947~1950,
    1959~1961
    rna:BB:1~119 861~864,915,917~919,958
    2374 4u26:BB
    (2.8Å)
    		 119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E133 RF00001 Escherichia
    coli
    str.
    K-12
    substr.
    MDS42
    1110693    		 24957822 Assembly1
    rna:BA:1~2903 78~81,89,96~97,99~100
    2375 4u26:CA
    (2.8Å)
    		 1539 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DDC0 RF00177 Escherichia
    coli
    str.
    K-12
    substr.
    MDS42
    1110693    		 24957822 Assembly2
    rna:DA:1~2903 702,783~784,899,1407~1409,1418
    ,1428~1429,1473~1475,1483~1484
    ,1492~1496,1517
    2376 4u26:DA
    (2.8Å)
    		 2897 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E25C RF02541 Escherichia
    coli
    str.
    K-12
    substr.
    MDS42
    1110693    		 24957822 Assembly2
    rna:CA:2~1540 1686,1689,1700~1704,1832,1836~
    1837,1846,1848,1912~1916,1919~
    1920,1947~1948,1959~1961
    rna:DB:2~119 861~863,915~919,958,2340
    2377 4u26:DB
    (2.8Å)
    		 118 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E133 RF00001 Escherichia
    coli
    str.
    K-12
    substr.
    MDS42
    1110693    		 24957822 Assembly2
    rna:DA:1~2903 41,78~81,89,97,99~100
    2378 4u27:AA
    (2.8Å)
    		 1538 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DDC0 RF00177 Escherichia
    coli
    str.
    K-12
    substr.
    MDS42
    1110693    		 24957822 Assembly1
    rna:BA:1~2903 702,1407~1408,1418~1420,1429,1
    473~1475,1483~1484,1492,1494~1
    496,1517
    2379 4u27:BA
    (2.8Å)
    		 2897 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E25C RF02541 Escherichia
    coli
    str.
    K-12
    substr.
    MDS42
    1110693    		 24957822 Assembly1
    rna:AA:2~1539 1689,1700~1704,1846~1847,1912~
    1913,1916,1919~1920,1947~1950,
    1959~1961
    rna:BB:1~119 861~864,915,917~919,958
    2380 4u27:BB
    (2.8Å)
    		 119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E133 RF00001 Escherichia
    coli
    str.
    K-12
    substr.
    MDS42
    1110693    		 24957822 Assembly1
    rna:BA:1~2903 78~81,89,96~97,99~100
    2381 4u27:CA
    (2.8Å)
    		 1539 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DDC0 RF00177 Escherichia
    coli
    str.
    K-12
    substr.
    MDS42
    1110693    		 24957822 Assembly2
    rna:DA:1~2903 702,783~784,899,1407~1409,1418
    ,1420,1428~1429,1473~1475,1483
    ~1484,1492~1495,1517
    2382 4u27:DA
    (2.8Å)
    		 2897 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E25C RF02541 Escherichia
    coli
    str.
    K-12
    substr.
    MDS42
    1110693    		 24957822 Assembly2
    rna:CA:2~1540 1686,1689,1700~1704,1832,1836~
    1837,1846,1848,1912~1916,1919~
    1920,1947~1948,1950,1959~1961
    rna:DB:2~119 861~863,915,917~919
    2383 4u27:DB
    (2.8Å)
    		 118 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E133 RF00001 Escherichia
    coli
    str.
    K-12
    substr.
    MDS42
    1110693    		 24957822 Assembly2
    rna:DA:1~2903 78~80,96,99~100
    2384 4u3m:1
    (3.0Å)
    		 3149 GO:0003735 (F) structural constituent ...
    GO:0006413 (P) translational initiation
    GO:0006414 (P) translational elongation
    GO:0006450 (P) regulation of translati...
    GO:0006457 (P) protein folding
    GO:0005840 (C) ribosome
    GO:0022625 (C) cytosolic large ribosom...    		 URS000061F377 RF02543 Saccharomyces
    cerevisiae
    S288C
    559292    		 25209664 Assembly1
    rna:2:1~1798 846~848,1935~1936,2125~2126,22
    55,2258~2259,2262~2263,2290~22
    92,2302~2304
    rna:3:1~121 996~998,1052,1054~1056,1156,11
    71,1197,1203
    rna:4:1~158 3~23,59,143,330~337,339~342,34
    5~346,349,351,368~369,404~419,
    656~657,691,1394~1395,1398~139
    9,1418~1419,1441,1530,1558,158
    5,1618,1830~1831,2386~2387,258
    5,2994~2995
    2385 4u3m:2
    (3.0Å)
    		 1750 GO:0003735 (F) structural constituent ...
    GO:0061770 (F) translation elongation ...
    GO:0001731 (P) formation of translatio...
    GO:0002181 (P) cytoplasmic translation
    GO:0002188 (P) translation reinitiation
    GO:0006414 (P) translational elongation
    GO:0005840 (C) ribosome
    GO:0022627 (C) cytosolic small ribosom...    		 URS00005F2C2D RF01960 Saccharomyces
    cerevisiae
    S288C
    559292    		 25209664 Assembly1
    rna:1:3~3396 628,971~973,1644~1646,1655~165
    7,1667~1668,1746~1747,1757~175
    9,1780
    2386 4u3m:3
    (3.0Å)
    		 121 GO:0003735 (F) structural constituent ...
    GO:0002181 (P) cytoplasmic translation
    GO:0005840 (C) ribosome
    GO:0022625 (C) cytosolic large ribosom...    		 URS000055688D RF00001 Saccharomyces
    cerevisiae
    S288C
    559292    		 25209664 Assembly1
    rna:1:3~3396 79~82,86,90,100,102~103
    2387 4u3m:4
    (3.0Å)
    		 158 GO:0003735 (F) structural constituent ...
    GO:0002181 (P) cytoplasmic translation
    GO:0005840 (C) ribosome
    GO:0022625 (C) cytosolic large ribosom...    		 URS00001BF64E RF00002 Saccharomyces
    cerevisiae
    S288C
    559292    		 25209664 Assembly1
    rna:1:3~3396 1~13,15~22,24~33,35~37,40,53~5
    4,104,109~110,114~115,126,129,
    136~157
    2388 4u3m:5
    (3.0Å)
    		 3150 GO:0003735 (F) structural constituent ...
    GO:0006413 (P) translational initiation
    GO:0006414 (P) translational elongation
    GO:0006450 (P) regulation of translati...
    GO:0006457 (P) protein folding
    GO:0005840 (C) ribosome
    GO:0022625 (C) cytosolic large ribosom...    		 URS000061F377 RF02543 Saccharomyces
    cerevisiae
    S288C
    559292    		 25209664 Assembly2
    rna:6:1~1800 846~848,1935~1936,2124~2125,22
    05,2255~2260,2262~2263,2290~22
    92,2302~2304
    rna:7:1~121 996~999,1052,1054~1056,1156,11
    71,1197,1203
    rna:8:1~158 3~23,59,330~337,339~342,345~34
    6,349,351,368~369,404~419,656~
    657,691,1394~1395,1398~1399,14
    18~1420,1441,1530,1558,1585,16
    18,1830~1832,2386,2585,2994~29
    95
    2389 4u3m:6
    (3.0Å)
    		 1795 GO:0003735 (F) structural constituent ...
    GO:0061770 (F) translation elongation ...
    GO:0001731 (P) formation of translatio...
    GO:0002181 (P) cytoplasmic translation
    GO:0002188 (P) translation reinitiation
    GO:0006414 (P) translational elongation
    GO:0005840 (C) ribosome
    GO:0022627 (C) cytosolic small ribosom...    		 URS00005F2C2D RF01960 Saccharomyces
    cerevisiae
    S288C
    559292    		 25209664 Assembly2
    rna:5:3~3396 628~629,913,971~973,1644~1646,
    1655~1657,1667,1746~1747,1757~
    1759,1780
    2390 4u3m:7
    (3.0Å)
    		 121 GO:0003735 (F) structural constituent ...
    GO:0002181 (P) cytoplasmic translation
    GO:0005840 (C) ribosome
    GO:0022625 (C) cytosolic large ribosom...    		 URS000055688D RF00001 Saccharomyces
    cerevisiae
    S288C
    559292    		 25209664 Assembly2
    rna:5:3~3396 79~82,86,90,100,102~104
    2391 4u3m:8
    (3.0Å)
    		 158 GO:0003735 (F) structural constituent ...
    GO:0002181 (P) cytoplasmic translation
    GO:0005840 (C) ribosome
    GO:0022625 (C) cytosolic large ribosom...    		 URS00001BF64E RF00002 Saccharomyces
    cerevisiae
    S288C
    559292    		 25209664 Assembly2
    rna:5:3~3396 1~13,15~22,24~33,35~37,40,53~5
    4,104,109~110,113~115,126,129,
    136~152,154~157
    2392 4u3n:1
    (3.2Å)
    		 3149 GO:0003735 (F) structural constituent ...
    GO:0006413 (P) translational initiation
    GO:0006414 (P) translational elongation
    GO:0006450 (P) regulation of translati...
    GO:0006457 (P) protein folding
    GO:0005840 (C) ribosome
    GO:0022625 (C) cytosolic large ribosom...    		 URS000061F377 RF02543 Saccharomyces
    cerevisiae
    S288C
    559292    		 25209664 Assembly1
    rna:2:1~1798 846~848,1935~1936,2125~2126,22
    55,2258~2259,2262~2263,2290~22
    92,2302~2304
    rna:3:1~121 996~998,1052,1054~1056,1156,11
    71,1197,1203
    rna:4:1~158 3~23,59,143,330~337,339~342,34
    5~346,349,351,368~369,404~419,
    656~657,691,1394~1395,1398~139
    9,1418~1419,1441,1530,1558,158
    5,1618,1830~1831,2386~2387,258
    5,2994~2995
    2393 4u3n:2
    (3.2Å)
    		 1750 GO:0003735 (F) structural constituent ...
    GO:0061770 (F) translation elongation ...
    GO:0001731 (P) formation of translatio...
    GO:0002181 (P) cytoplasmic translation
    GO:0002188 (P) translation reinitiation
    GO:0006414 (P) translational elongation
    GO:0005840 (C) ribosome
    GO:0022627 (C) cytosolic small ribosom...    		 URS00005F2C2D RF01960 Saccharomyces
    cerevisiae
    S288C
    559292    		 25209664 Assembly1
    rna:1:3~3396 628~629,971~973,1644~1646,1655
    ~1657,1667,1746~1747,1757~1759
    ,1780
    2394 4u3n:3
    (3.2Å)
    		 121 GO:0003735 (F) structural constituent ...
    GO:0002181 (P) cytoplasmic translation
    GO:0005840 (C) ribosome
    GO:0022625 (C) cytosolic large ribosom...    		 URS000055688D RF00001 Saccharomyces
    cerevisiae
    S288C
    559292    		 25209664 Assembly1
    rna:1:3~3396 79~82,86,90,100,102~103
    2395 4u3n:4
    (3.2Å)
    		 158 GO:0003735 (F) structural constituent ...
    GO:0002181 (P) cytoplasmic translation
    GO:0005840 (C) ribosome
    GO:0022625 (C) cytosolic large ribosom...    		 URS00001BF64E RF00002 Saccharomyces
    cerevisiae
    S288C
    559292    		 25209664 Assembly1
    rna:1:3~3396 1~13,15~22,24~33,35~37,40,53~5
    4,104,109~110,114~115,126,129,
    137~157
    2396 4u3n:5
    (3.2Å)
    		 3150 GO:0003735 (F) structural constituent ...
    GO:0006413 (P) translational initiation
    GO:0006414 (P) translational elongation
    GO:0006450 (P) regulation of translati...
    GO:0006457 (P) protein folding
    GO:0005840 (C) ribosome
    GO:0022625 (C) cytosolic large ribosom...    		 URS000061F377 RF02543 Saccharomyces
    cerevisiae
    S288C
    559292    		 25209664 Assembly2
    rna:6:1~1800 846~848,1935~1936,2125,2205,22
    55,2257~2260,2262~2263,2290~22
    92,2302~2304
    rna:7:1~121 996~999,1052,1054~1056,1156,11
    71,1197,1203
    rna:8:1~158 3~23,59,330~337,339~342,344~34
    6,349,351,368~369,404~419,656~
    657,691,1394~1395,1398~1399,14
    18~1419,1441,1530,1558,1585,16
    18,1830~1832,2386,2585,2994~29
    95
    2397 4u3n:6
    (3.2Å)
    		 1795 GO:0003735 (F) structural constituent ...
    GO:0061770 (F) translation elongation ...
    GO:0001731 (P) formation of translatio...
    GO:0002181 (P) cytoplasmic translation
    GO:0002188 (P) translation reinitiation
    GO:0006414 (P) translational elongation
    GO:0005840 (C) ribosome
    GO:0022627 (C) cytosolic small ribosom...    		 URS00005F2C2D RF01960 Saccharomyces
    cerevisiae
    S288C
    559292    		 25209664 Assembly2
    rna:5:3~3396 628,913,971~973,1644~1646,1655
    ~1657,1667,1746~1747,1757~1759
    ,1780
    2398 4u3n:7
    (3.2Å)
    		 121 GO:0003735 (F) structural constituent ...
    GO:0002181 (P) cytoplasmic translation
    GO:0005840 (C) ribosome
    GO:0022625 (C) cytosolic large ribosom...    		 URS000055688D RF00001 Saccharomyces
    cerevisiae
    S288C
    559292    		 25209664 Assembly2
    rna:5:3~3396 79~82,86,90,100,102~104
    2399 4u3n:8
    (3.2Å)
    		 158 GO:0003735 (F) structural constituent ...
    GO:0002181 (P) cytoplasmic translation
    GO:0005840 (C) ribosome
    GO:0022625 (C) cytosolic large ribosom...    		 URS00001BF64E RF00002 Saccharomyces
    cerevisiae
    S288C
    559292    		 25209664 Assembly2
    rna:5:3~3396 1~22,24~33,35~37,40~41,53~54,1
    04,106,110,113~115,126,129,136
    ~157
    2400 4u3u:1
    (2.9Å)
    		 3149 GO:0003735 (F) structural constituent ...
    GO:0006413 (P) translational initiation
    GO:0006414 (P) translational elongation
    GO:0006450 (P) regulation of translati...
    GO:0006457 (P) protein folding
    GO:0005840 (C) ribosome
    GO:0022625 (C) cytosolic large ribosom...    		 URS000061F377 RF02543 Saccharomyces
    cerevisiae
    S288C
    559292    		 25209664 Assembly1
    rna:2:1~1798 846~848,1935~1936,2125~2126,22
    55~2256,2258~2259,2262~2263,22
    90~2292,2302~2304
    rna:3:1~121 996~998,1052,1054~1056,1156,11
    71,1197,1203
    rna:4:1~158 3~23,59,143,330~337,339~342,34
    5~346,349,351,368~369,404~419,
    656~657,691,1394~1395,1399,141
    8~1420,1441,1530,1558,1584~158
    5,1618,1830~1832,2386,2585,299
    4~2995
    << < 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 > >>
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    Reference:
  • Chengxin Zhang, Lydia Freddolino (2024) "FURNA: a database for function annotations of RNA structures," PLOS Biology 22(7): e3002476.