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FURNA
Download all results in tab-seperated text for 14210 RNAs.
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  • Hover over PubMed to view title of the PubMed publications.
  • Hover over Ligand to view the name of the ligand and the ligand-binding nucleotides on the RNA.

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    # PDB
    (Resolution)    		 Length EC number
    & GO term     		RNAcentral Rfam Taxon PubMed ATtRACT
    motif     		Ligand &
    binding nucleotides
    2401 4u4o:4
    (3.6Å)
    		 158 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001BF64E RF00002 Saccharomyces
    cerevisiae
    S288C
    559292    		 25209664 Assembly1
    rna:1:3~3396 1~22,24~33,35~37,40,53~54,104,
    106,109,113~115,126,129,136~15
    7
    2402 4u4o:5
    (3.6Å)
    		 3150 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000061F377 RF02540
    RF02543    		 Saccharomyces
    cerevisiae
    S288C
    559292    		 25209664 Assembly2
    rna:6:1~1800 846~848,1935~1936,2124~2125,22
    05,2255,2257~2259,2262~2263,22
    90~2293,2302~2303
    rna:7:1~121 996~999,1052,1054~1056,1156,11
    71,1197,1202~1203
    rna:8:1~158 3~23,59,143,236,330~337,339~34
    2,345~346,349,351,368~369,404~
    419,656~657,691,1394~1395,1399
    ,1418~1419,1441,1530,1558,1571
    ,1584~1585,1618,1830,1832,2386
    ~2387,2585,2994~2995
    2403 4u4o:6
    (3.6Å)
    		 1791 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00005F2C2D RF01960
    RF01959
    RF00177    		 Saccharomyces
    cerevisiae
    S288C
    559292    		 25209664 Assembly2
    rna:5:3~3396 628~629,913,971~973,1644~1646,
    1655~1657,1667,1746~1747,1758~
    1759,1780
    2404 4u4o:7
    (3.6Å)
    		 121 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000055688D RF00001 Saccharomyces
    cerevisiae
    S288C
    559292    		 25209664 Assembly2
    rna:5:3~3396 79~82,86,90,100,102~104
    2405 4u4o:8
    (3.6Å)
    		 158 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001BF64E RF00002 Saccharomyces
    cerevisiae
    S288C
    559292    		 25209664 Assembly2
    rna:5:3~3396 1~22,24~37,40,53~54,95,104,106
    ,109~110,112~115,126~127,129,1
    36~157
    2406 4u4q:1
    (3.0Å)
    		 3149 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000061F377 RF02540
    RF02543    		 Saccharomyces
    cerevisiae
    S288C
    559292    		 25209664 Assembly1
    rna:2:1~1798 846~848,1935,2125~2126,2255,22
    58~2259,2262~2263,2290~2292,23
    02~2304
    rna:3:1~121 996~998,1052,1054~1056,1156,11
    71,1197,1203
    rna:4:1~158 3~23,59,143,330~337,339~342,34
    5~346,349,351,368~369,398,404~
    419,656~657,691,1394~1395,1398
    ~1399,1418~1420,1441,1530,1558
    ,1585,1618,1830~1831,2386~2387
    ,2585,2994~2995
    2407 4u4q:2
    (3.0Å)
    		 1750 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00005F2C2D RF01960
    RF01959
    RF00177    		 Saccharomyces
    cerevisiae
    S288C
    559292    		 25209664 Assembly1
    rna:1:3~3396 628,971~973,1644~1646,1655~165
    7,1667,1746~1747,1757~1759,178
    0
    2408 4u4q:3
    (3.0Å)
    		 121 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000055688D RF00001 Saccharomyces
    cerevisiae
    S288C
    559292    		 25209664 Assembly1
    rna:1:3~3396 79~82,86,90,100,102~103
    2409 4u4q:4
    (3.0Å)
    		 158 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001BF64E RF00002 Saccharomyces
    cerevisiae
    S288C
    559292    		 25209664 Assembly1
    rna:1:3~3396 1~13,15~22,24~33,35~37,40,53~5
    4,104,109~110,114~115,126,129,
    136~152,154~157
    2410 4u4q:5
    (3.0Å)
    		 3150 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000061F377 RF02540
    RF02543    		 Saccharomyces
    cerevisiae
    S288C
    559292    		 25209664 Assembly2
    rna:6:1~1800 846~848,1935~1936,2125,2205,22
    55~2260,2262~2263,2290~2292,23
    02~2304
    rna:7:1~121 996~999,1052,1054~1056,1156,11
    71,1197,1203
    rna:8:1~158 3~23,59,330~337,339~342,345~34
    6,349,351,368~369,404~419,656~
    657,691,1394~1395,1398~1399,14
    18~1420,1441,1530,1585,1618,18
    30~1832,2386,2585,2994~2995
    2411 4u4q:6
    (3.0Å)
    		 1795 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00005F2C2D RF01960
    RF01959
    RF00177    		 Saccharomyces
    cerevisiae
    S288C
    559292    		 25209664 Assembly2
    rna:5:3~3396 628,913,971~973,1644~1646,1655
    ~1657,1667,1746~1747,1757~1759
    ,1780
    2412 4u4q:7
    (3.0Å)
    		 121 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000055688D RF00001 Saccharomyces
    cerevisiae
    S288C
    559292    		 25209664 Assembly2
    rna:5:3~3396 79~82,86,90,100,102~104
    2413 4u4q:8
    (3.0Å)
    		 158 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001BF64E RF00002 Saccharomyces
    cerevisiae
    S288C
    559292    		 25209664 Assembly2
    rna:5:3~3396 1~13,15~22,24~33,35~37,40,53~5
    4,104,106,109~110,113~115,126,
    129,136~152,154~157
    2414 4u4r:1
    (2.801Å)
    		 3149 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000061F377 RF02540
    RF02543    		 Saccharomyces
    cerevisiae
    S288C
    559292    		 25209664 Assembly1
    rna:2:1~1798 846~848,1935,2125~2126,2255,22
    58~2259,2262~2263,2290~2292,23
    02~2304
    rna:3:1~121 996~998,1052,1054~1056,1156,11
    71,1197,1203
    rna:4:1~158 3~23,59,143,330~337,339~342,34
    5~346,349,351,368~369,404~419,
    656~657,691,1394~1395,1399,141
    8~1420,1441,1530,1558,1585,161
    8,1830~1832,2386,2585,2994~299
    5
    2415 4u4r:2
    (2.801Å)
    		 1750 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00005F2C2D RF01960
    RF01959
    RF00177    		 Saccharomyces
    cerevisiae
    S288C
    559292    		 25209664 Assembly1
    rna:1:3~3396 628~629,971~973,1644~1646,1655
    ~1657,1667,1746~1747,1757~1759
    ,1780
    2416 4u4r:3
    (2.801Å)
    		 121 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000055688D RF00001 Saccharomyces
    cerevisiae
    S288C
    559292    		 25209664 Assembly1
    rna:1:3~3396 79~82,86,90,100,102~103
    2417 4u4r:4
    (2.801Å)
    		 158 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001BF64E RF00002 Saccharomyces
    cerevisiae
    S288C
    559292    		 25209664 Assembly1
    rna:1:3~3396 1~22,24~33,35~37,40~41,53~54,1
    04,109~110,113~115,126,129,136
    ~157
    2418 4u4r:5
    (2.801Å)
    		 3150 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000061F377 RF02540
    RF02543    		 Saccharomyces
    cerevisiae
    S288C
    559292    		 25209664 Assembly2
    rna:6:1~1800 846~848,1935~1936,2125,2205,22
    55~2259,2262~2263,2290~2292,23
    02~2304
    rna:7:1~121 996~998,1052,1054~1056,1156,11
    71,1197,1203
    rna:8:1~158 3~23,59,143,330~337,339~342,34
    5~346,349,351,368~369,404~419,
    656~657,691,1394~1395,1398~139
    9,1418~1420,1441,1530,1571,158
    5,1618,1830~1832,2386,2585,299
    4~2995
    2419 4u4r:6
    (2.801Å)
    		 1795 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00005F2C2D RF01960
    RF01959
    RF00177    		 Saccharomyces
    cerevisiae
    S288C
    559292    		 25209664 Assembly2
    rna:5:3~3396 628~629,913,971~973,1644~1646,
    1655~1657,1667~1668,1746~1747,
    1757~1759,1780
    2420 4u4r:7
    (2.801Å)
    		 121 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000055688D RF00001 Saccharomyces
    cerevisiae
    S288C
    559292    		 25209664 Assembly2
    rna:5:3~3396 79~82,86,90,100,102~103
    2421 4u4r:8
    (2.801Å)
    		 158 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001BF64E RF00002 Saccharomyces
    cerevisiae
    S288C
    559292    		 25209664 Assembly2
    rna:5:3~3396 1~13,15~22,24~33,35~37,40,53~5
    4,104,109~110,113~115,126~127,
    129,136~152,154~157
    2422 4u4u:1
    (3.0Å)
    		 3149 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000061F377 RF02540
    RF02543    		 Saccharomyces
    cerevisiae
    S288C
    559292    		 25209664 Assembly1
    rna:2:1~1798 846~848,1922,1935~1936,2125~21
    26,2255~2256,2258~2259,2262~22
    63,2290~2292,2302~2304
    rna:3:1~121 996~998,1052,1054~1056,1156,11
    71,1197,1203
    rna:4:1~158 3~23,59,143,330~337,339~342,34
    5~346,349,351,368~369,404~419,
    656~657,691,1394~1395,1398~139
    9,1418~1419,1441,1530,1558,158
    5,1618,1830~1831,2386~2387,258
    5,2994~2995
    2423 4u4u:2
    (3.0Å)
    		 1750 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00005F2C2D RF01960
    RF01959
    RF00177    		 Saccharomyces
    cerevisiae
    S288C
    559292    		 25209664 Assembly1
    rna:1:3~3396 628,971~973,1644~1646,1655~165
    7,1667~1668,1746~1747,1757~175
    9,1780
    2424 4u4u:3
    (3.0Å)
    		 121 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000055688D RF00001 Saccharomyces
    cerevisiae
    S288C
    559292    		 25209664 Assembly1
    rna:1:3~3396 79~82,86,90,100,102~103
    2425 4u4u:4
    (3.0Å)
    		 158 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001BF64E RF00002 Saccharomyces
    cerevisiae
    S288C
    559292    		 25209664 Assembly1
    rna:1:3~3396 1~22,24~33,35~37,40,53~54,104,
    109,114~115,126,129,136~157
    2426 4u4u:5
    (3.0Å)
    		 3150 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000061F377 RF02540
    RF02543    		 Saccharomyces
    cerevisiae
    S288C
    559292    		 25209664 Assembly2
    rna:6:1~1800 846~848,1935~1936,2125,2205,22
    55,2257~2259,2262~2263,2290~22
    92,2302~2304
    rna:7:1~121 996~999,1052,1054~1056,1156,11
    71,1197,1203
    rna:8:1~158 3~23,59,143,330~337,339~342,34
    5~346,349,351,368~369,404~419,
    656~657,691,1394~1395,1398~139
    9,1418~1420,1441,1530,1585,161
    8,1830~1832,2386,2585,2994~299
    5
    2427 4u4u:6
    (3.0Å)
    		 1795 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00005F2C2D RF01960
    RF01959
    RF00177    		 Saccharomyces
    cerevisiae
    S288C
    559292    		 25209664 Assembly2
    rna:5:3~3396 628,913,971~973,1644~1646,1655
    ~1657,1667,1746~1747,1757~1759
    ,1780
    2428 4u4u:7
    (3.0Å)
    		 121 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000055688D RF00001 Saccharomyces
    cerevisiae
    S288C
    559292    		 25209664 Assembly2
    rna:5:3~3396 79~82,86,90,100,102~104
    2429 4u4u:8
    (3.0Å)
    		 158 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001BF64E RF00002 Saccharomyces
    cerevisiae
    S288C
    559292    		 25209664 Assembly2
    rna:5:3~3396 1~13,15~22,24~33,35~37,40,53~5
    4,104,109~110,113~115,126,129,
    137~152,154~157
    2430 4u4y:1
    (3.2Å)
    		 3149 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000061F377 RF02540
    RF02543    		 Saccharomyces
    cerevisiae
    S288C
    559292    		 25209664 Assembly1
    rna:2:1~1798 846~848,1935,2125~2126,2255,22
    58~2259,2262~2263,2290~2292,23
    02~2304
    rna:3:1~121 996~998,1052,1054~1056,1156,11
    71,1197,1203
    rna:4:1~158 3~23,59,143,330~337,339~342,34
    5~346,349,351,368~369,404~419,
    656~657,691,1394~1395,1398~139
    9,1418~1420,1441,1530,1558,158
    4~1585,1618,1830~1831,2386~238
    7,2585,2994~2995
    2431 4u4y:2
    (3.2Å)
    		 1750 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00005F2C2D RF01960
    RF01959
    RF00177    		 Saccharomyces
    cerevisiae
    S288C
    559292    		 25209664 Assembly1
    rna:1:3~3396 628~629,971~973,1644~1646,1655
    ~1657,1667,1746~1747,1757~1759
    ,1780
    2432 4u4y:3
    (3.2Å)
    		 121 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000055688D RF00001 Saccharomyces
    cerevisiae
    S288C
    559292    		 25209664 Assembly1
    rna:1:3~3396 79~82,86,90,100,102~103
    2433 4u4y:4
    (3.2Å)
    		 158 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001BF64E RF00002 Saccharomyces
    cerevisiae
    S288C
    559292    		 25209664 Assembly1
    rna:1:3~3396 1~22,24~33,35~37,40,53~54,104,
    109,114~115,126,129,136~157
    2434 4u4y:5
    (3.2Å)
    		 3150 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000061F377 RF02540
    RF02543    		 Saccharomyces
    cerevisiae
    S288C
    559292    		 25209664 Assembly2
    rna:6:1~1800 846~848,1935~1936,2125,2205,22
    55~2259,2262~2263,2290~2292,23
    02~2304
    rna:7:1~121 996~999,1052,1054~1056,1156,11
    71,1197,1203
    rna:8:1~158 3~23,59,143,330~337,339~342,34
    5~346,349,351,368~369,404~419,
    656~657,691,1394~1395,1398~139
    9,1418~1419,1441,1530,1585,161
    8,1830~1832,2386~2387,2585,299
    4~2995
    2435 4u4y:6
    (3.2Å)
    		 1795 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00005F2C2D RF01960
    RF01959
    RF00177    		 Saccharomyces
    cerevisiae
    S288C
    559292    		 25209664 Assembly2
    rna:5:3~3396 628,913,971~973,1644~1646,1655
    ~1657,1667,1746~1747,1757~1759
    ,1780
    2436 4u4y:7
    (3.2Å)
    		 121 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000055688D RF00001 Saccharomyces
    cerevisiae
    S288C
    559292    		 25209664 Assembly2
    rna:5:3~3396 79~82,86,90,100,102~104
    2437 4u4y:8
    (3.2Å)
    		 158 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001BF64E RF00002 Saccharomyces
    cerevisiae
    S288C
    559292    		 25209664 Assembly2
    rna:5:3~3396 1~13,15~22,24~33,35~37,40,53~5
    4,104,109~110,113~115,126,129,
    136~152,154~157
    2438 4u4z:1
    (3.1Å)
    		 3149 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000061F377 RF02540
    RF02543    		 Saccharomyces
    cerevisiae
    S288C
    559292    		 25209664 Assembly1
    rna:2:1~1798 846~848,1935~1936,2125~2126,22
    55,2258~2259,2262~2263,2290~22
    92,2302~2304
    rna:3:1~121 996~999,1052,1054~1056,1156,11
    71,1197,1203
    rna:4:1~158 3~23,59,143,330~337,339~342,34
    4~346,349,351,368~369,404~419,
    656~657,691,1394~1395,1398~139
    9,1418~1420,1441,1530,1558,158
    4~1585,1618,1830~1831,2386,258
    5,2994~2995
    2439 4u4z:2
    (3.1Å)
    		 1750 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00005F2C2D RF01960
    RF01959
    RF00177    		 Saccharomyces
    cerevisiae
    S288C
    559292    		 25209664 Assembly1
    rna:1:3~3396 628,971~973,1644~1646,1655~165
    7,1667~1668,1746~1747,1757~175
    9,1780
    2440 4u4z:3
    (3.1Å)
    		 121 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000055688D RF00001 Saccharomyces
    cerevisiae
    S288C
    559292    		 25209664 Assembly1
    rna:1:3~3396 79~82,86,90,100,102~104
    2441 4u4z:4
    (3.1Å)
    		 158 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001BF64E RF00002 Saccharomyces
    cerevisiae
    S288C
    559292    		 25209664 Assembly1
    rna:1:3~3396 1~13,15~22,24~33,35~37,40,53~5
    4,104,109,114~115,126,129,136~
    157
    2442 4u4z:5
    (3.1Å)
    		 3150 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000061F377 RF02540
    RF02543    		 Saccharomyces
    cerevisiae
    S288C
    559292    		 25209664 Assembly2
    rna:6:1~1800 846~848,1935~1936,2125,2205,22
    55,2257~2259,2262~2263,2290~22
    92,2302~2304
    rna:7:1~121 996~999,1052,1054~1056,1156,11
    71,1197,1203
    rna:8:1~158 3~23,59,143,330~337,339~342,34
    4~346,349,351,368~369,404~419,
    656~657,691,1394~1395,1398~139
    9,1418~1420,1441,1530,1558,158
    5,1618,1830~1832,2386,2585,299
    4~2995
    2443 4u4z:6
    (3.1Å)
    		 1795 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00005F2C2D RF01960
    RF01959
    RF00177    		 Saccharomyces
    cerevisiae
    S288C
    559292    		 25209664 Assembly2
    rna:5:3~3396 628,913,971~973,1644~1646,1655
    ~1657,1667~1668,1746~1747,1757
    ~1759,1780
    2444 4u4z:7
    (3.1Å)
    		 121 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000055688D RF00001 Saccharomyces
    cerevisiae
    S288C
    559292    		 25209664 Assembly2
    rna:5:3~3396 79~82,86,90,100,102~104
    2445 4u4z:8
    (3.1Å)
    		 158 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001BF64E RF00002 Saccharomyces
    cerevisiae
    S288C
    559292    		 25209664 Assembly2
    rna:5:3~3396 1~13,15~22,24~33,35~37,40,53~5
    4,104,109~110,113~115,126,129,
    136~157
    2446 4u50:1
    (3.2Å)
    		 3149 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000061F377 RF02540
    RF02543    		 Saccharomyces
    cerevisiae
    S288C
    559292    		 25209664 Assembly1
    rna:2:1~1798 846~848,1935~1936,2125~2126,22
    55,2258~2259,2262~2263,2290~22
    92,2302~2304
    rna:3:1~121 996~998,1052,1054~1056,1156,11
    71,1197,1203
    rna:4:1~158 3~23,59,143,330~337,339~342,34
    4~346,349,351,368~369,404~419,
    656~657,691,1394~1395,1398~139
    9,1418~1419,1441,1530,1558,158
    5,1618,1830~1831,2386~2387,258
    5,2994~2995
    2447 4u50:2
    (3.2Å)
    		 1750 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00005F2C2D RF01960
    RF01959
    RF00177    		 Saccharomyces
    cerevisiae
    S288C
    559292    		 25209664 Assembly1
    rna:1:3~3396 628,971~973,1644~1646,1655~165
    7,1667,1746~1747,1757~1759,178
    0
    2448 4u50:3
    (3.2Å)
    		 121 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000055688D RF00001 Saccharomyces
    cerevisiae
    S288C
    559292    		 25209664 Assembly1
    rna:1:3~3396 79~82,86,90,100,102~103
    2449 4u50:4
    (3.2Å)
    		 158 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001BF64E RF00002 Saccharomyces
    cerevisiae
    S288C
    559292    		 25209664 Assembly1
    rna:1:3~3396 1~22,24~33,35~37,40,53~54,104,
    106,109~110,114~115,126,129,13
    6~157
    2450 4u50:5
    (3.2Å)
    		 3150 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000061F377 RF02540
    RF02543    		 Saccharomyces
    cerevisiae
    S288C
    559292    		 25209664 Assembly2
    rna:6:1~1800 846~848,1935~1936,2125,2205,22
    55,2257~2259,2262~2263,2290~22
    92,2302~2304
    rna:7:1~121 996~999,1052,1054~1056,1156,11
    71,1197,1203
    rna:8:1~158 3~23,59,143~144,236,330~337,33
    9~342,345~346,349,351,368~369,
    404~419,656~657,691,1394~1395,
    1398~1399,1418~1419,1441,1530,
    1558,1571,1585,1618~1619,1830~
    1832,2386~2387,2585,2994~2995
    2451 4u50:6
    (3.2Å)
    		 1795 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00005F2C2D RF01960
    RF01959
    RF00177    		 Saccharomyces
    cerevisiae
    S288C
    559292    		 25209664 Assembly2
    rna:5:3~3396 628~629,913,971~973,1644~1646,
    1655~1657,1667,1746~1747,1757~
    1759,1780
    2452 4u50:7
    (3.2Å)
    		 121 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000055688D RF00001 Saccharomyces
    cerevisiae
    S288C
    559292    		 25209664 Assembly2
    rna:5:3~3396 79~82,86,90,100,102~104
    2453 4u50:8
    (3.2Å)
    		 158 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001BF64E RF00002 Saccharomyces
    cerevisiae
    S288C
    559292    		 25209664 Assembly2
    rna:5:3~3396 1~22,24~33,35~37,40~41,53~54,9
    5,104,106,109~110,113~115,126~
    127,129,136~152,154~157
    2454 4u51:1
    (3.2Å)
    		 3149 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000061F377 RF02540
    RF02543    		 Saccharomyces
    cerevisiae
    S288C
    559292    		 25209664 Assembly1
    rna:2:1~1798 846~848,1935,2125~2126,2195,22
    55,2258~2259,2262~2263,2290~22
    92,2302~2304
    rna:3:1~121 996~998,1052,1054~1056,1171,11
    97,1203
    rna:4:1~158 3~23,59,143,330~337,339~342,34
    5~346,349,351,368~369,404~419,
    656~657,691,1394~1395,1398~139
    9,1418~1420,1441,1530,1558,158
    5,1618,1830~1832,2386~2387,258
    5,2994~2995
    2455 4u51:2
    (3.2Å)
    		 1750 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00005F2C2D RF01960
    RF01959
    RF00177    		 Saccharomyces
    cerevisiae
    S288C
    559292    		 25209664 Assembly1
    rna:1:3~3396 628,971~973,994,1644~1646,1655
    ~1657,1667,1746~1747,1757~1759
    ,1780
    2456 4u51:3
    (3.2Å)
    		 121 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000055688D RF00001 Saccharomyces
    cerevisiae
    S288C
    559292    		 25209664 Assembly1
    rna:1:3~3396 79~82,86,90,100,102~103
    2457 4u51:4
    (3.2Å)
    		 158 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001BF64E RF00002 Saccharomyces
    cerevisiae
    S288C
    559292    		 25209664 Assembly1
    rna:1:3~3396 1~22,24~33,35~37,40,53~54,104,
    109~110,113~115,126,129,136~15
    7
    2458 4u51:5
    (3.2Å)
    		 3150 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000061F377 RF02540
    RF02543    		 Saccharomyces
    cerevisiae
    S288C
    559292    		 25209664 Assembly2
    rna:6:1~1800 846~848,1935~1936,2125,2205,22
    55,2257~2260,2262~2263,2290~22
    92,2302~2303
    rna:7:1~121 996~999,1052,1054~1056,1156,11
    71,1197,1203
    rna:8:1~158 3~23,59,143,330~337,339~342,34
    5~346,349,351,368~369,404~419,
    656~657,691,1394~1395,1398~139
    9,1419,1441,1530,1558,1571,158
    5,1618~1619,1830~1832,2386,258
    5,2994~2995
    2459 4u51:6
    (3.2Å)
    		 1795 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00005F2C2D RF01960
    RF01959
    RF00177    		 Saccharomyces
    cerevisiae
    S288C
    559292    		 25209664 Assembly2
    rna:5:3~3396 628,913,971~973,1644~1646,1655
    ~1657,1667,1746~1747,1757~1759
    ,1780
    2460 4u51:7
    (3.2Å)
    		 121 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000055688D RF00001 Saccharomyces
    cerevisiae
    S288C
    559292    		 25209664 Assembly2
    rna:5:3~3396 79~82,86,90,100,102~104
    2461 4u51:8
    (3.2Å)
    		 158 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001BF64E RF00002 Saccharomyces
    cerevisiae
    S288C
    559292    		 25209664 Assembly2
    rna:5:3~3396 1~22,24~33,35~37,40,53~54,104,
    109~110,113~115,126~127,129,13
    6~157
    2462 4u52:1
    (3.0Å)
    		 3149 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000061F377 RF02540
    RF02543    		 Saccharomyces
    cerevisiae
    S288C
    559292    		 25209664 Assembly1
    rna:2:1~1798 846~848,1935~1936,2125,2255,22
    58~2259,2262~2263,2290~2292,23
    02~2304
    rna:3:1~121 996~998,1052,1054~1056,1156,11
    71,1197,1203
    rna:4:1~158 3~23,59,143,330~337,339~342,34
    5~346,349,351,368~369,404~419,
    656~657,691,1394~1395,1399,141
    8~1420,1441,1530,1558,1584~158
    5,1618,1830~1832,2386~2387,258
    5,2994~2995
    2463 4u52:2
    (3.0Å)
    		 1750 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00005F2C2D RF01960
    RF01959
    RF00177    		 Saccharomyces
    cerevisiae
    S288C
    559292    		 25209664 Assembly1
    rna:1:3~3396 628,971~973,1644~1646,1655~165
    7,1667,1746~1747,1757~1759,178
    0
    2464 4u52:3
    (3.0Å)
    		 121 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000055688D RF00001 Saccharomyces
    cerevisiae
    S288C
    559292    		 25209664 Assembly1
    rna:1:3~3396 79~82,86,90,100,102~103
    2465 4u52:4
    (3.0Å)
    		 158 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001BF64E RF00002 Saccharomyces
    cerevisiae
    S288C
    559292    		 25209664 Assembly1
    rna:1:3~3396 1~13,15~22,24~33,35~37,40,53~5
    4,104,109~110,113~115,126,129,
    136~152,154~157
    2466 4u52:5
    (3.0Å)
    		 3150 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000061F377 RF02540
    RF02543    		 Saccharomyces
    cerevisiae
    S288C
    559292    		 25209664 Assembly2
    rna:6:1~1800 846~848,1935~1936,2125,2205,22
    55~2260,2262~2263,2290~2292,23
    02~2304
    rna:7:1~121 996~999,1052,1054~1056,1156,11
    71,1197,1203
    rna:8:1~158 3~23,59,143,330~337,339~342,34
    5~346,349,351,368~369,404~419,
    656~657,691,1394~1395,1398~139
    9,1418~1420,1441,1530,1558,157
    1,1585,1618~1619,1830~1832,238
    6,2585,2994~2995
    2467 4u52:6
    (3.0Å)
    		 1795 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00005F2C2D RF01960
    RF01959
    RF00177    		 Saccharomyces
    cerevisiae
    S288C
    559292    		 25209664 Assembly2
    rna:5:3~3396 628,913,971~973,1644~1646,1655
    ~1657,1667,1746~1747,1757~1759
    ,1780
    2468 4u52:7
    (3.0Å)
    		 121 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000055688D RF00001 Saccharomyces
    cerevisiae
    S288C
    559292    		 25209664 Assembly2
    rna:5:3~3396 79~82,86,90,100,102~104
    2469 4u52:8
    (3.0Å)
    		 158 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001BF64E RF00002 Saccharomyces
    cerevisiae
    S288C
    559292    		 25209664 Assembly2
    rna:5:3~3396 1~13,15~22,24~33,35~37,40,53~5
    4,104,109~110,113~115,126~127,
    129,136~152,154~157
    2470 4u53:1
    (3.3Å)
    		 3149 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000061F377 RF02540
    RF02543    		 Saccharomyces
    cerevisiae
    S288C
    559292    		 25209664 Assembly1
    rna:2:1~1798 846~848,1935,2125~2126,2207,22
    55~2256,2258~2259,2262~2263,22
    90~2293,2302~2304
    rna:3:1~121 996~998,1052,1054~1056,1156,11
    71,1197,1203
    rna:4:1~158 3~23,59,143,330~337,339~342,34
    5~346,349,351,368~369,404~419,
    656~657,691,1394~1395,1398~139
    9,1418~1420,1441,1530,1558,158
    4~1585,1618,1830~1831,2386~238
    7,2585,2994~2995
    2471 4u53:2
    (3.3Å)
    		 1750 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00005F2C2D RF01960
    RF01959
    RF00177    		 Saccharomyces
    cerevisiae
    S288C
    559292    		 25209664 Assembly1
    rna:1:3~3396 628~629,913,971~973,1644~1646,
    1655~1657,1667,1746~1747,1757~
    1759,1780
    2472 4u53:3
    (3.3Å)
    		 121 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000055688D RF00001 Saccharomyces
    cerevisiae
    S288C
    559292    		 25209664 Assembly1
    rna:1:3~3396 79~82,86,90,100,102~103
    2473 4u53:4
    (3.3Å)
    		 158 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001BF64E RF00002 Saccharomyces
    cerevisiae
    S288C
    559292    		 25209664 Assembly1
    rna:1:3~3396 1~22,24~33,35~37,40,53~54,104,
    109,114~115,126,129,136~157
    2474 4u53:5
    (3.3Å)
    		 3150 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000061F377 RF02540
    RF02543    		 Saccharomyces
    cerevisiae
    S288C
    559292    		 25209664 Assembly2
    rna:6:1~1800 846~848,1935~1936,2125,2205,22
    55~2260,2262~2263,2290~2293,23
    02~2303
    rna:7:1~121 996~999,1052~1056,1156,1171,11
    97,1203
    rna:8:1~158 3~23,59,143~144,236,330~337,33
    9~342,345~346,349,351,368~369,
    404~419,656~657,691,1394~1395,
    1398~1399,1418~1420,1441,1530,
    1558,1585,1618,1830~1832,2386,
    2585,2994~2995
    2475 4u53:6
    (3.3Å)
    		 1795 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00005F2C2D RF01960
    RF01959
    RF00177    		 Saccharomyces
    cerevisiae
    S288C
    559292    		 25209664 Assembly2
    rna:5:3~3396 628~629,913,971~973,1644~1646,
    1655~1657,1667~1668,1746~1747,
    1757~1759,1780
    2476 4u53:7
    (3.3Å)
    		 121 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000055688D RF00001 Saccharomyces
    cerevisiae
    S288C
    559292    		 25209664 Assembly2
    rna:5:3~3396 79~82,86,90,100,102~104
    2477 4u53:8
    (3.3Å)
    		 158 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001BF64E RF00002 Saccharomyces
    cerevisiae
    S288C
    559292    		 25209664 Assembly2
    rna:5:3~3396 1~22,24~33,35~37,40,53~54,95,1
    04,106,109~110,113~115,129,136
    ~152,154~157
    2478 4u55:1
    (3.2Å)
    		 3149 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000061F377 RF02540
    RF02543    		 Saccharomyces
    cerevisiae
    S288C
    559292    		 25209664 Assembly1
    rna:2:1~1798 846~848,1935~1936,2125~2126,22
    07,2255,2258~2259,2262~2263,22
    90~2292,2302~2304
    rna:3:1~121 996~999,1052,1054~1056,1171,11
    97,1203
    rna:4:1~158 3~23,59,143,330~337,339~342,34
    5~346,349,351,368~369,404~419,
    656~657,691,1394~1395,1398~139
    9,1418~1420,1441,1530,1558,158
    5,1618,1830~1832,2386~2387,258
    5,2994~2995
    2479 4u55:2
    (3.2Å)
    		 1750 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00005F2C2D RF01960
    RF01959
    RF00177    		 Saccharomyces
    cerevisiae
    S288C
    559292    		 25209664 Assembly1
    rna:1:3~3396 628~629,913,971~973,1644~1646,
    1655~1657,1667,1746~1748,1757~
    1759,1780
    2480 4u55:3
    (3.2Å)
    		 121 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000055688D RF00001 Saccharomyces
    cerevisiae
    S288C
    559292    		 25209664 Assembly1
    rna:1:3~3396 79~82,86,90,100,102~104
    2481 4u55:4
    (3.2Å)
    		 158 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001BF64E RF00002 Saccharomyces
    cerevisiae
    S288C
    559292    		 25209664 Assembly1
    rna:1:3~3396 1~13,15~22,24~33,35~37,40,53~5
    4,104,109~110,113~115,126,129,
    136~157
    2482 4u55:5
    (3.2Å)
    		 3150 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000061F377 RF02540
    RF02543    		 Saccharomyces
    cerevisiae
    S288C
    559292    		 25209664 Assembly2
    rna:6:1~1800 846~848,1935~1936,2125,2205,22
    55~2259,2262~2263,2290~2292,23
    02~2304
    rna:7:1~121 996~999,1052,1054~1056,1156,11
    71,1197,1203
    rna:8:1~158 3~23,59,143~144,330~337,339~34
    2,344~346,349,351,368~369,404~
    419,656~657,691,1394~1395,1398
    ~1399,1418~1419,1441,1530,1585
    ,1618~1619,1830~1832,2386,2585
    ,2994~2995
    2483 4u55:6
    (3.2Å)
    		 1795 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00005F2C2D RF01960
    RF01959
    RF00177    		 Saccharomyces
    cerevisiae
    S288C
    559292    		 25209664 Assembly2
    rna:5:3~3396 628~629,913,971~973,1644~1646,
    1655~1657,1667~1668,1746~1747,
    1757~1759,1780
    2484 4u55:7
    (3.2Å)
    		 121 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000055688D RF00001 Saccharomyces
    cerevisiae
    S288C
    559292    		 25209664 Assembly2
    rna:5:3~3396 79~82,86,90,100,102~104
    2485 4u55:8
    (3.2Å)
    		 158 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001BF64E RF00002 Saccharomyces
    cerevisiae
    S288C
    559292    		 25209664 Assembly2
    rna:5:3~3396 1~13,15~22,24~33,35~37,40~41,5
    3~54,104,109~110,113~115,126,1
    29,136~152,154~157
    2486 4u56:1
    (3.45Å)
    		 3149 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000061F377 RF02540
    RF02543    		 Saccharomyces
    cerevisiae
    S288C
    559292    		 25209664 Assembly1
    rna:2:1~1798 846~848,1922,1935~1936,2125~21
    26,2255~2256,2258~2259,2262~22
    63,2290~2292,2302~2304
    rna:3:1~121 996~998,1052,1054~1056,1171,11
    97,1203
    rna:4:1~158 3~23,59,143,330~337,339~342,34
    4~346,349,351,368~369,404~419,
    656~657,691,1394~1395,1398~139
    9,1418~1420,1441,1530,1585,161
    8,1830~1831,2386,2585,2994~299
    5
    2487 4u56:2
    (3.45Å)
    		 1750 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00005F2C2D RF01960
    RF01959
    RF00177    		 Saccharomyces
    cerevisiae
    S288C
    559292    		 25209664 Assembly1
    rna:1:3~3396 628~629,971~973,1644~1646,1655
    ~1657,1667,1746~1748,1757~1759
    ,1780
    2488 4u56:3
    (3.45Å)
    		 121 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000055688D RF00001 Saccharomyces
    cerevisiae
    S288C
    559292    		 25209664 Assembly1
    rna:1:3~3396 79~82,86,90,100,102~103
    2489 4u56:4
    (3.45Å)
    		 158 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001BF64E RF00002 Saccharomyces
    cerevisiae
    S288C
    559292    		 25209664 Assembly1
    rna:1:3~3396 1~22,24~33,35~37,40,53~54,104,
    109~110,114~115,126,129,136~15
    7
    2490 4u56:5
    (3.45Å)
    		 3150 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000061F377 RF02540
    RF02543    		 Saccharomyces
    cerevisiae
    S288C
    559292    		 25209664 Assembly2
    rna:6:1~1800 846~848,1935~1936,2124~2125,22
    05,2255~2259,2262~2263,2290~22
    92,2302~2304
    rna:7:1~121 996~999,1052,1054~1056,1156,11
    71,1197,1203
    rna:8:1~158 3~23,59,143,330~337,339~342,34
    5~346,349,351,368~369,404~419,
    656~657,691,1394~1395,1398~139
    9,1418~1419,1441,1530,1558,157
    1,1585,1618,1830~1832,2386,258
    5,2994~2995
    2491 4u56:6
    (3.45Å)
    		 1795 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00005F2C2D RF01960
    RF01959
    RF00177    		 Saccharomyces
    cerevisiae
    S288C
    559292    		 25209664 Assembly2
    rna:5:3~3396 628~629,913,971~973,1644~1646,
    1655~1657,1667,1746~1747,1757~
    1759,1780
    2492 4u56:7
    (3.45Å)
    		 121 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000055688D RF00001 Saccharomyces
    cerevisiae
    S288C
    559292    		 25209664 Assembly2
    rna:5:3~3396 79~82,86,90,100,102~104
    2493 4u56:8
    (3.45Å)
    		 158 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001BF64E RF00002 Saccharomyces
    cerevisiae
    S288C
    559292    		 25209664 Assembly2
    rna:5:3~3396 1~22,24~33,35~37,40~41,53~54,1
    04,109,113~115,126~127,129,136
    ~157
    2494 4u67:X
    (3.65Å)
    		 2667 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DEF1 RF02540
    RF02541    		 Deinococcus
    radiodurans
    R1
    =
    ATCC
    13939
    =
    DSM
    20539
    243230    		 28689968 Assembly1
    rna:Y:2~123 874~876,927~931,969,2318
    2495 4u67:Y
    (3.65Å)
    		 122 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E04E RF00001 Deinococcus
    radiodurans
    R1
    =
    ATCC
    13939
    =
    DSM
    20539
    243230    		 28689968 Assembly1
    rna:X:1~2877 43,80~83,92,99~100,102~103
    2496 4u6f:1
    (3.1Å)
    		 3149 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000061F377 RF02540
    RF02543    		 Saccharomyces
    cerevisiae
    S288C
    559292    		 25209664 Assembly1
    rna:2:1~1798 846~848,1935~1936,2125~2126,22
    55~2256,2258~2259,2262~2263,22
    90~2292,2302~2304
    rna:3:1~121 996~998,1052,1054~1056,1156,11
    71,1197,1203
    rna:4:1~158 3~23,59,143,330~337,339~342,34
    5~346,349,351,368~369,404~419,
    656~657,691,1394~1395,1398~139
    9,1418~1420,1441,1530,1558,158
    4~1585,1618,1830~1831,2386~238
    7,2585,2994~2995
    2497 4u6f:2
    (3.1Å)
    		 1781 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00005F2C2D RF01960
    RF01959
    RF00177    		 Saccharomyces
    cerevisiae
    S288C
    559292    		 25209664 Assembly1
    rna:1:3~3396 628~629,971~973,1644~1646,1655
    ~1657,1667,1746~1747,1757~1759
    ,1780
    2498 4u6f:3
    (3.1Å)
    		 121 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000055688D RF00001 Saccharomyces
    cerevisiae
    S288C
    559292    		 25209664 Assembly1
    rna:1:3~3396 79~82,86,90,100,102~103
    2499 4u6f:4
    (3.1Å)
    		 158 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001BF64E RF00002 Saccharomyces
    cerevisiae
    S288C
    559292    		 25209664 Assembly1
    rna:1:3~3396 1~22,24~33,35~37,40~41,53~54,1
    04,109,114~115,126,129,136~157
    2500 4u6f:5
    (3.1Å)
    		 3150 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000061F377 RF02540
    RF02543    		 Saccharomyces
    cerevisiae
    S288C
    559292    		 25209664 Assembly2
    rna:6:1~1800 846~848,1935~1936,2124~2125,22
    05,2255~2256,2258~2259,2262~22
    63,2290~2292,2302~2304
    rna:7:1~121 996~999,1052,1054~1056,1156,11
    71,1197,1202~1203
    rna:8:1~158 3~23,59,143,330~337,339~342,34
    5~346,349,351,368~369,404~419,
    656~657,691,1394~1395,1398~139
    9,1418~1420,1441,1530,1558,161
    8,1830~1832,2386,2585,2994~299
    5
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    Reference:
  • Chengxin Zhang, P. Lydia Freddolino (2023) FURNA: a database for function annotations of RNA structures, bioRxiv 2023.12.19.572314.

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