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Download all results in tab-seperated text for 14210 RNAs.

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Hover over Ligand to view the name of the ligand and the ligand-binding nucleotides on the RNA.

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#	PDB (Resolution)	Length	EC number & GO term	RNAcentral	Rfam	Taxon	PubMed	ATtRACT motif	Ligand & binding nucleotides
2501	4u6f:6 (3.1Å)	1795	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS00005F2C2D	RF01960 RF01959 RF00177	Saccharomyces cerevisiae S288C 559292	25209664		Assembly2 rna:5:3~3396 628~629,913,971~973,1644~1646, 1655~1657,1667,1746~1747,1757~ 1759,1780
2502	4u6f:7 (3.1Å)	121	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS000055688D	RF00001	Saccharomyces cerevisiae S288C 559292	25209664		Assembly2 rna:5:3~3396 79~82,86,90,100,102~104
2503	4u6f:8 (3.1Å)	158	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS00001BF64E	RF00002	Saccharomyces cerevisiae S288C 559292	25209664		Assembly2 rna:5:3~3396 1~22,24~33,35~37,40,53~54,104, 113~115,126,129,137~157
2504	4ug0:L5 (3.6Å)	3776	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS000086853A	RF02543 RF02540	Homo sapiens 9606	25901680	M054_0.6 1306 769 706 1303 762 763 1148 1149 764 870 167 21 1079 1029 1075 1072 1073 M104_0.6 1071 819 1373 938 546 s52 s51 s50 931 930 936 s59 995 994 595 1314 991 1312 1311 1028 1150 673 123 124 125 M290_0.6 1068 1017 1060 s100 s102 52 533 M227_0.6 1384 375 s49 926 822 1128 988 1321 708 704 705 1328 707 1124 987 1126 703 M077_0.6 s18 83 1181 797 796 795 836 837 791 727 838 1334 s70 1016 s72 1393 610 1012 1013 1236 1237 1231 1232 1233 1335 s17 M109_0.6 1336 1331 1239 1333 589 M273_0.6 s99 1389 902 821 900 901 906 905 33 s48 853 M102_0.6 924 M044_0.6 1245 s62 s96 1227 883 M035_0.6 1223 M156_0.6 604 M320_0.6 1347 60 s81 M349_0.6 1083 175 1026 100 42 s61 977 976 974 852 970 M154_0.6 884 s55 979 M153_0.6 183 1238 185 1375 1036 503 1034 1035 1212 1043 1211 1216 1042 986 467 M148_0.6 1354 M103_0.6 91 1127 162 M070_0.6 813 M020_0.6 M050_0.6 1187 1182 815 1037 1107 M347_0.6 722 935 M086_0.6 1164 1165 1166 606 886 156 748 749 608 s77 M061_0.6 958 1055 878 879 1059 953 952 872 954 957 M272_0.6 1352 774 1215 776 1173 770 773 1183 1271 1272 1273 779 778 1178 M151_0.6 78 1285 M083_0.6 1041 1040 1045 1044 790 1288 354 688 1360 684 800 1368 804	Assembly1 rna:L7:1~120 1736~1738,1741,1792~1796,1909, 1936,1942 rna:L8:1~156 1~22,58,146,339,342~348,350~35 3,356~357,360,362,379~380,415~ 423,425~430,1304~1305,1333~133 4,1371,2308~2309,2312~2313,233 3~2334,2355,2444~2445,2472,249 3,2508~2509,2542,2544,2778~277 9 rna:S2:1~1869 1563~1565,2884~2885,3628~3629, 3699,3710~3711,3759,3765~3766, 3794~3796,3806~3808 rna:S6:2~76 3714~3715,3738~3739,3958,4046~ 4047,4341~4342,4370~4371
2505	4ug0:L7 (3.6Å)	120	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS00000F9D45	RF00001	Homo sapiens 9606	25901680	931 1290 s51 879	Assembly1 rna:L5:1~5069 77~80,84,88,98,100~103
2506	4ug0:L8 (3.6Å)	156	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS0000005270	RF00002	Homo sapiens 9606	25901680	1227 592 s24 993 1215 1352 s37 1238 1178 M085_0.6 1389 1360 589 375 M106_0.6	Assembly1 rna:L5:1~5069 3~22,24~33,35~37,40,53~54,103, 108,110,112~113,115,126~128,13 5~136,138~156
2507	4ug0:S2 (3.6Å)	1742	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS0000868520	RF01960 RF01959 RF00177	Homo sapiens 9606	25901680	1303 1263 872 1149 1267 764 954 957 692 1079 1075 1072 1073 819 346 546 1378 930 936 935 M296_0.6 1314 M141_0.6 1068 s72 M147_0.6 1060 s102 1384 1386 M016_0.6 s48 926 822 1128 1323 988 595 1327 707 986 796 836 762 790 838 1124 1017 1393 1392 1390 1236 1335 1334 M109_0.6 1238 M273_0.6 s14 445 s99 1311 105 902 900 905 821 788 1333 924 1244 s62 s96 M074_0.6 335 60 1167 977 976 974 852 970 509 1037 1035 1213 756 639 M148_0.6 786 1355 M065_0.6 93 167 M070_0.6 813 M050_0.6 1188 1022 1187 1029 815 727 722 883 604 606 884 749 779 608 996 M037_0.6 1055 878 1059 952 1195 43 870 1380 325 758 770 610 1274 1042 M127_0.6 s24 s61 804	Assembly1 rna:L5:1~5069 678,970,1028~1030,1051,1180,17 06,1708~1709,1719~1721,1731,18 15~1817,1828,1849~1850
2508	4ug0:S6 (3.6Å)	75	GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation	URS0000326EAC	RF00005	Homo sapiens 9606	25901680	M352_0.6 1235 s46 1075	Assembly1 rna:L5:1~5069 4~5,19,56,70~72,76 rna:S2:1~1869 33,36
2509	4ujc:A2 (9.5Å)	3616	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS000043B91E	RF02543 RF02540	Oryctolagus cuniculus 9986	25064512		Assembly1 rna:AC:44~353 3927~3930 rna:A3:1~157 1~7,9~13,15~17,19~22,58,333~33 5,337~339,341~343,346~348,351, 353,370~371,406~421,1349~1350, 2284~2285,2288~2289,2309~2311, 2421,2448,2464~2465,2469~2470, 2486,2520,2755~2756,4122,4531~ 4532 rna:A4:1~119 1085~1086,1715~1720,1771,1773~ 1775,1872,1914,1919~1920 rna:C1:1~1869 1543~1544,3679~3681,3735
2510	4ujc:A3 (9.5Å)	157	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS000080DE76	RF00002	Oryctolagus cuniculus 9986	25064512		Assembly1 rna:A2:1~5022 1~2,4~13,15~22,24~33,35~36,40, 53,103,107~108,111~113,124~127 ,136~139,141~148,150~151,153~1 57
2511	4ujc:A4 (9.5Å)	119	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS00000F9D45	RF00001	Oryctolagus cuniculus 9986	25064512		Assembly1 rna:A2:1~5022 77~80,84,88,97~98,100~102,104, 107~108
2512	4ujc:AA (9.5Å)	76	GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation	URS00005AA258	RF00005	Oryctolagus cuniculus 9986	25064512		Assembly1 rna:AC:44~353 35~37 rna:A2:1~5022 13~14 rna:C1:1~1869 29~31,34,41~42
2513	4ujc:AC (9.5Å)	261	GO:0043022 (F) ribosome binding GO:0006417 (P) regulation of translation	URS000080E1FF	RF00061 RF00620	11103	25064512		Assembly1 rna:AA:1~76 342~344 rna:A2:1~5022 90~94 rna:C1:1~1869 265~268,299,338~346,348~349
2514	4ujc:C1 (9.5Å)	1742	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS00005A14E2	RF01960 RF01959 RF00177	Oryctolagus cuniculus 9986	25064512		Assembly1 rna:AA:1~76 1247~1248,1524~1525,1639~1641, 1701 rna:AC:44~353 626,960~962,1056~1059,1113~111 7,1698,1824~1826,1829~1830 rna:A2:1~5022 678,969~970,1028~1029,1708,172 1,1849
2515	4ujd:A2 (8.9Å)	3616	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS000043B91E	RF02543 RF02540	Oryctolagus cuniculus 9986	25064512		Assembly1 rna:A3:1~157 1~7,9~13,15~17,19~22,58,333~33 5,337~339,341~343,346~348,351, 353,370~371,406~421,1349~1350, 2284~2285,2288~2289,2309~2311, 2421,2448,2464~2465,2469~2470, 2486,2520,2755~2756,4122,4531~ 4532 rna:A4:1~119 1085~1086,1715~1720,1771,1773~ 1775,1872,1914,1919~1920 rna:BA:1~76 3739~3741 rna:C1:1~1869 1543,3728~3729,3732,3735,3765, 3775~3776
2516	4ujd:A3 (8.9Å)	157	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS000080DE76	RF00002	Oryctolagus cuniculus 9986	25064512		Assembly1 rna:A2:1~5022 1~2,4~13,15~22,24~33,35~36,40, 53,103,107~108,111~113,124~127 ,136~139,141~148,150~151,153~1 57
2517	4ujd:A4 (8.9Å)	119	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS00000F9D45	RF00001	Oryctolagus cuniculus 9986	25064512		Assembly1 rna:A2:1~5022 77~80,84,88,97~98,100~102,104, 107~108
2518	4ujd:BA (8.9Å)	76	GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation	URS00005AA258	RF00005	Oryctolagus cuniculus 9986	25064512		Assembly1 rna:A2:1~5022 12~14 rna:BC:44~353 34~37 rna:C1:1~1869 29~31,34,39,41~42
2519	4ujd:BC (8.9Å)	261	GO:0043022 (F) ribosome binding GO:0006417 (P) regulation of translation	URS000080E1FF	RF00061 RF00620	11103	25064512		Assembly1 rna:BA:1~76 342~344 rna:C1:1~1869 264~268,299,338~344,346~347,34 9
2520	4ujd:C1 (8.9Å)	1742	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS00005A14E2	RF01960 RF01959 RF00177	Oryctolagus cuniculus 9986	25064512		Assembly1 rna:A2:1~5022 1030,1708~1710,1719~1720,1815 rna:BA:1~76 1058,1248,1524~1525,1639~1641, 1701 rna:BC:44~353 626,960~961,1056,1058~1059,111 2~1117,1698,1701~1702,1704,182 5,1830
2521	4uje:A2 (6.9Å)	3616	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS000043B91E	RF02543 RF02540	Oryctolagus cuniculus 9986	24995983		Assembly1 rna:AV:1~76 3724~3725,3738~3740,3879,4156~ 4158,4356~4357,4508 rna:AW:1~76 3683~3684,3708~3709,3927,4014, 4331 rna:B1:1~1869 1543~1544,2861~2862,3598~3599, 3663~3664,3668~3669,3679~3681, 3728~3729,3732~3733,3735~3736, 3764~3765,3775~3777 rna:A3:1~157 1~7,9~13,15~17,19~22,58,333~33 5,337~339,341~343,346~348,351, 353,370~371,406~421,1349~1350, 2284~2285,2288~2289,2309~2311, 2421,2448,2464~2465,2469~2470, 2486,2520,2755~2756,4122,4531~ 4532 rna:A4:1~119 1085~1086,1715~1720,1771,1773~ 1775,1872,1914,1919~1920
2522	4uje:A3 (6.9Å)	157	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS000080DE76	RF00002	Oryctolagus cuniculus 9986	24995983		Assembly1 rna:A2:1~5022 1~2,4~13,15~22,24~33,35~36,40, 53,103,107~108,111~113,124~127 ,136~139,141~148,150~151,153~1 57
2523	4uje:A4 (6.9Å)	119	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS00000F9D45	RF00001	Oryctolagus cuniculus 9986	24995983		Assembly1 rna:A2:1~5022 77~80,84,88,97~98,100~102,104, 107~108
2524	4uje:AV (6.9Å)	76	GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation	URS00005AA258	RF00005	Oryctolagus cuniculus 9986	24995983		Assembly1 rna:AX:34~61 35~37 rna:B1:1~1869 29~31,34,38~39,41 rna:A2:1~5022 12~13,24,74~76
2525	4uje:AW (6.9Å)	76	GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation	URS00005AA258	RF00005	Bos taurus 9913	24995983		Assembly1 rna:AX:34~61 36~37 rna:B1:1~1869 34~35 rna:A2:1~5022 3~4,19,55~56,70~71,76
2526	4uje:AX (6.9Å)	28	N/A	N/A	N/A	Escherichia coli 562	24995983		Assembly1 rna:AV:1~76 46~48 rna:AW:1~76 43~44 rna:B1:1~1869 36,41~43,45~50,52
2527	4uje:B1 (6.9Å)	1742	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS000080DD44	RF01960 RF01959 RF00177	Oryctolagus cuniculus 9986	24995983		Assembly1 rna:AV:1~76 1058,1248,1524~1525,1639~1641, 1701 rna:AW:1~76 1641,1684 rna:AX:34~61 961,1207,1698,1701~1702,1704,1 824~1826,1830,1837,1869 rna:A2:1~5022 678,969~970,1028~1029,1051~105 2,1059,1180,1708~1710,1719~172 1,1731~1732,1815~1817,1826~182 7,1849
2528	4uy8:A (3.8Å)	2854	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS000080DD2C	RF02540 RF02541	Escherichia coli 562	25310980		Assembly1 rna:B:2~119 861~863,915~919,958 rna:V:1~76 1908~1909,1922~1924,2064,2251~ 2252,2439,2451,2602
2529	4uy8:B (3.8Å)	118	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS0000366A67	RF00001	Escherichia coli 562	25310980		Assembly1 rna:A:1~2903 78~81,89~90,96~97,99~100
2530	4uy8:V (3.8Å)	77	GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation	URS000034D020	RF00005	Escherichia coli 562	25310980		Assembly1 rna:A:1~2903 11~12,24~25,74~76
2531	4v19:A (3.4Å)	1515	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS000080E15B	RF02541 RF02540	Sus scrofa 9823	25271403		Assembly1 rna:C:74~76 1149~1151,1271~1272,1423 rna:Z:74~76 1327~1328,1374~1376,1404~1406
2532	4v3p:L1 (34.0Å)	3352	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS0000B21DE9	RF02540 RF02543	Triticum aestivum 4565	25376914		Assembly1 rna:S2:1~75 2244~2247,2259~2263,2304,2403~ 2405,2625~2626,2810,2955~2957, 2964~2966,2970~2973 rna:S1:1~1810 845~852,854~855,1913~1919,1928 ~1934,1941~1942,2061~2064,2083 ~2087,2100~2103,2118~2120,2172 ,2188,2201~2203,2236,2257,2297 ~2298,3334~3335 rna:L3:1~120 1000,1058~1061,1173~1174,1206~ 1207 rna:L2:6~164 2~23,57~58,179~180,326,328~335 ,337~340,343~344,347,366~367,3 96,402~418,630~631,660~661,695 ,1397~1398,1422,1444,1562,1581 ,1618,1826~1827,2385~2386,2998 ,3390
2533	4v3p:L2 (34.0Å)	159	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS000081169E	RF00002	Triticum aestivum 4565	25376914		Assembly1 rna:L1:1~3391 6~26,28~41,44~45,96,98,108,113 ,119~120,136,144~163
2534	4v3p:L3 (34.0Å)	120	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS0000188192	RF00001	Triticum aestivum 4565	25376914		Assembly1 rna:L1:1~3391 77,79~80,84,88,97~100,102
2535	4v3p:S1 (34.0Å)	1743	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS0000B21DD3	RF01960 RF01959 RF00177	Triticum aestivum 4565	25376914		Assembly1 rna:S3:12~22 581,1155~1157,1642,1645~1646,1 648,1771,1778~1779 rna:S2:1~75 1005~1006,1195,1468~1469,1583~ 1584,1645 rna:L1:1~3391 220~223,319~321,329~331,346~34 8,353~354,631~633,842~844,918, 976~979,989~990,1000,1662~1665 ,1672~1676,1685~1686,1735~1738 ,1744~1749,1756~1758,1768~1769 ,1789
2536	4v3p:S2 (34.0Å)	75	GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation	URS00005AD0B9	RF00005	Triticum aestivum 4565	25376914		Assembly1 rna:S3:12~22 35~37 rna:S1:1~1810 30~31,34,38~41 rna:L1:1~3391 2~4,10~14,22~27,68~75
2537	4v3p:S3 (34.0Å)	11	N/A	URS000080E0BA	N/A	Triticum aestivum 4565	25376914		Assembly1 rna:S2:1~75 16~17 rna:S1:1~1810 13,15~19,21~22
2538	4v42:AB (5.5Å)	76	GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation	URS000011107D	RF00005	Thermus thermophilus 274	11283358		Assembly1 rna:A1:1~6 34~36
2539	4v42:AC (5.5Å)	76	GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation	URS000011107D	RF00005	Thermus thermophilus 274	11283358		Assembly1 rna:A1:1~6 34~36 rna:BA:1~2902 25,75
2540	4v42:BA (5.5Å)	2889	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS000080E1D6	RF02540 RF02541 RF00002	Thermus thermophilus 274	11283358		Assembly1 rna:AC:1~76 1923,2602
2541	4v49:AA (8.7Å)	1527	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS000080DD60	RF00177 RF01959 RF01960	Escherichia coli 562	12853578		Assembly1 rna:AV:1~76 790,1338~1341,1400 rna:AU:6~14 926,1196,1400~1401,1493,1498,1 505 rna:B0:1~2877 702,761~762,783~784,900,1408~1 409,1419~1420,1427~1430,1472~1 476,1484~1485,1495,1517
2542	4v49:AV (8.7Å)	76	GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation	URS000011107D	RF00005	Escherichia coli 562	12853578		Assembly1 rna:AA:5~1534 30~32,34,38,40 rna:AU:6~14 34~36 rna:B0:1~2877 11~12,25,74~76
2543	4v49:AW (8.7Å)	76	GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation	URS000011107D	RF00005	Escherichia coli 562	12853578		Assembly1 rna:B0:1~2877 11~12,17,19,64,71~72,74~76
2544	4v49:B0 (8.7Å)	2825	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS000080DF19	RF02540 RF02541	Escherichia coli 562	12853578		Assembly1 rna:AA:5~1534 726,729,1703~1707,1717~1721,18 24,1828~1829,1838~1840,1896,19 00,1902~1903,1932~1933,1943~19 44 rna:AV:1~76 1891~1892,1905~1907,2046~2047, 2230~2232,2430,2484,2564,2580~ 2581 rna:AW:1~76 895,1898~1899,1925~1926,2461~2 462,2485~2487,2532~2534,2552,2 562 rna:B9:4~121 874,930~931,969,1038,2298
2545	4v49:B9 (8.7Å)	118	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS000080DF5C	RF00001	Escherichia coli 562	12853578		Assembly1 rna:B0:1~2877 15,81~83,90,92,100
2546	4v4a:AA (9.5Å)	1533	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS000080E127	RF00177 RF01959 RF01960	Escherichia coli 562	12853578		Assembly1 rna:B0:1~2877 702,761~762,784,791,899~900,14 18~1420,1427~1430,1473~1476,14 84~1485,1495,1517
2547	4v4a:B0 (9.5Å)	2825	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS000080DF19	RF02540 RF02541	Escherichia coli 562	12853578		Assembly1 rna:AA:5~1544 726,729,1703~1704,1706~1707,17 18~1720,1823~1824,1829,1838~18 40,1902~1903,1905,1931~1933,19 43~1944 rna:B9:4~121 874,930~931,969,1038,2298
2548	4v4a:B9 (9.5Å)	118	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS000080DF5C	RF00001	Escherichia coli 562	12853578		Assembly1 rna:B0:1~2877 15,81~83,90,92,100
2549	4v4b:AA (11.7Å)	1466	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS000080DDC6	RF00177 RF01959 RF01960	Saccharomyces cerevisiae 4932	14976550 10404220	M107_0.6 M080_0.6 529 523	Assembly1 rna:B3:10~2914 702,784,1407~1408,1418~1420,14 73,1482~1485,1492~1493,1495~14 96
2550	4v4b:B3 (11.7Å)	2863	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS000080E33E	RF02540 RF00002	Saccharomyces cerevisiae 4932	14976550 10404220	103 387 149	Assembly1 rna:AA:5~1534 1780,1893,1902~1903,1953~1954, 1960~1962,1988~1991,2000~2003 rna:B4:1~122 960,1098~1100,1125,1131~1132,1 249~1251,2329
2551	4v4b:B4 (11.7Å)	122	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS000080E074	RF00001	Saccharomyces cerevisiae 4932	14976550 10404220		Assembly1 rna:B3:10~2914 46,68,87~92
2552	4v4g:AA (11.5Å)	1526	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS000080E307	RF00177 RF01959 RF01960	Escherichia coli 562	15502846		Assembly1 rna:BB:1~2877 270,582,702,773,784,900,1427~1 430,1473,1475,1483~1484,1495~1 496,1517
2553	4v4g:BA (11.5Å)	118	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS000080E160	RF00001	Escherichia coli 562	15502846		Assembly1 rna:BB:1~2877 81~83,102
2554	4v4g:BB (11.5Å)	2825	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS000080DF1F	RF02540 RF02541	Escherichia coli 562	15502846		Assembly1 rna:AA:5~1534 727,1704~1706,1718~1721,1738,1 784,1823~1824,1828,1839~1840,1 895,1902~1903,1930,1942~1943 rna:BA:4~121 874,876,929~931
2555	4v4g:CA (11.5Å)	1526	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS000080E307	RF00177 RF01959 RF01960	Escherichia coli 562	15502846		Assembly2 rna:DB:1~2877 270,702,784,900,1427~1430,1473 ,1475~1476,1483~1484,1495~1496 ,1517
2556	4v4g:DA (11.5Å)	118	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS000080E160	RF00001	Escherichia coli 562	15502846		Assembly2 rna:DB:1~2877 81~83,91,99~100,102~103
2557	4v4g:DB (11.5Å)	2825	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS000080DF1F	RF02540 RF02541	Escherichia coli 562	15502846		Assembly2 rna:CA:5~1534 1704,1706~1707,1718~1721,1738, 1823,1828,1839~1840,1895,1902~ 1903,1930,1942~1943 rna:DA:4~121 874~876,927~931,969~970
2558	4v4g:EA (11.5Å)	1526	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS000080E307	RF00177 RF01959 RF01960	Escherichia coli 562	15502846		Assembly3 rna:FB:1~2877 270,702,784,1405~1409,1418~141 9,1475,1483~1484,1494~1495,151 7
2559	4v4g:FA (11.5Å)	118	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS000080E160	RF00001	Escherichia coli 562	15502846		Assembly3 rna:FB:1~2877 80~82,86,91,99~103
2560	4v4g:FB (11.5Å)	2825	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS000080DF1F	RF02540 RF02541	Escherichia coli 562	15502846		Assembly3 rna:EA:5~1534 1706,1738,1828,1840,1895~1903, 1930,1932,1942~1944 rna:FA:4~121 874~876,927~931,970,997~998
2561	4v4g:GA (11.5Å)	1526	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS000080E307	RF00177 RF01959 RF01960	Escherichia coli 562	15502846		Assembly4 rna:HB:1~2877 270,582,702,783~784,900,1405,1 407~1409,1418,1427~1430,1473~1 475,1483~1484,1494~1496,1517
2562	4v4g:HA (11.5Å)	118	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS000080E160	RF00001	Escherichia coli 562	15502846		Assembly4 rna:HB:1~2877 81~83,102
2563	4v4g:HB (11.5Å)	2825	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS000080DF1F	RF02540 RF02541	Escherichia coli 562	15502846		Assembly4 rna:GA:5~1534 727,1704~1706,1718~1721,1738,1 823,1828,1840,1895,1898~1903,1 930,1942~1944 rna:HA:4~121 874,876,929~930
2564	4v4g:IA (11.5Å)	1526	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS000080E307	RF00177 RF01959 RF01960	Escherichia coli 562	15502846		Assembly5 rna:JB:1~2877 270,702,791,900,1405~1409,1418 ~1419,1428~1430,1473~1475,1483 ~1484,1494~1496,1517
2565	4v4g:JA (11.5Å)	118	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS000080E160	RF00001	Escherichia coli 562	15502846		Assembly5 rna:JB:1~2877 81~82,86,91,102
2566	4v4g:JB (11.5Å)	2825	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS000080DF1F	RF02540 RF02541	Escherichia coli 562	15502846		Assembly5 rna:IA:5~1534 1704~1706,1718,1720~1721,1738, 1895~1903,1905,1930,1932,1942~ 1944 rna:JA:4~121 874~876,928~930,970,997~998
2567	4v4h:AA (3.46Å)	1530	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS00000ABFE9	RF00177 RF01959 RF01960	Escherichia coli 562	16998486		Assembly1 rna:BB:1~2903 702,783~784,899,1407~1409,1418 ,1428~1430,1473~1475,1483~1484 ,1492~1495,1517
2568	4v4h:BA (3.46Å)	117	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS0000049E57	RF00001	Escherichia coli 562	16998486		Assembly1 rna:BB:1~2903 78~81,89~90,96~97,99~100
2569	4v4h:BB (3.46Å)	2841	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS00004B0F34	RF02540 RF02541	Escherichia coli 562	16998486		Assembly1 rna:AA:5~1534 1689,1700~1704,1832,1836~1837, 1846,1848,1895,1912~1913,1916, 1919~1920,1947~1948,1959~1961 rna:BA:2~118 861~864,915,917~919,958
2570	4v4h:CA (3.46Å)	1530	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS00000ABFE9	RF00177 RF01959 RF01960	Escherichia coli 562	16998486		Assembly2 rna:DB:1~2903 702,783~784,899,1407~1409,1418 ,1429~1430,1473~1475,1483~1485 ,1492,1494~1496,1517
2571	4v4h:DA (3.46Å)	117	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS0000049E57	RF00001	Escherichia coli 562	16998486		Assembly2 rna:DB:1~2903 41,78~81,89~90,96~97,99~101
2572	4v4h:DB (3.46Å)	2841	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS00004B0F34	RF02540 RF02541	Escherichia coli 562	16998486		Assembly2 rna:CA:5~1534 1689,1700,1702~1704,1832,1836~ 1837,1846,1848,1912~1916,1919~ 1920,1947~1948,1959~1961 rna:DA:2~118 861~864,915,917~919,958,2340
2573	4v4i:0 (3.71Å)	76	GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation	URS000080E050	RF00005	Thermus thermophilus HB27 262724	16962654		Assembly1 rna:w:1~2902 3~4,56,71,76 rna:y:5~1529 35,38 rna:1:-3~3 34~35,37
2574	4v4i:w (3.71Å)	2889	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS000080E04D	RF02540 RF02541 RF00002	Thermus thermophilus HB27 262724	16962654		Assembly1 rna:x:1~119 861~863,915~918,958,1027 rna:y:5~1529 1689,1703~1704,1831~1833,1836~ 1837,1848,1912~1913,1915,1920, 1948,1960~1961 rna:z:1~76 1908,1923~1924,2063~2064,2251~ 2252,2255,2450~2451,2584~2585, 2601~2603 rna:0:1~76 1850~1851,2169,2393~2394,2421~ 2422
2575	4v4i:x (3.71Å)	120	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS000039883D	RF00001	Thermus thermophilus HB27 262724	16962654		Assembly1 rna:w:1~2902 79~81,88,89B,90,97~100
2576	4v4i:y (3.71Å)	1502	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS000080E229	RF00177 RF01959 RF01960	Thermus thermophilus HB27 262724	16962654		Assembly1 rna:w:1~2902 702,771,783~784,899~900,1407~1 409,1428~1429,1476,1483~1484,1 494~1496,1517 rna:z:1~76 790,966,1229~1230,1338~1340,14 00 rna:0:1~76 694,1340 rna:1:-3~3 693,926,1400~1401,1498,1505~15 06
2577	4v4i:z (3.71Å)	76	GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation	URS00005AA258	RF00005	Escherichia coli 562	16962654		Assembly1 rna:w:1~2902 2~3,12~13,25,74~76 rna:y:5~1529 29~31,34,38,40~41 rna:1:-3~3 34~37
2578	4v4j:2 (3.83Å)	76	GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation	URS000080E050	RF00005	Thermus thermophilus HB27 262724	17940016		Assembly1 rna:w:1~2902 3~4,19,56,71,75~76 rna:y:5~1541 38~39
2579	4v4j:3 (3.83Å)	18	N/A	N/A	N/A	Thermus thermophilus HB27 262724	17940016		Assembly1 rna:y:5~1541 1~8,10~11,13~18 rna:z:1~76 13~15
2580	4v4j:w (3.83Å)	2889	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS000080E04D	RF02540 RF02541 RF00002	Thermus thermophilus HB27 262724	17940016		Assembly1 rna:x:1~119 861~863,915,917~919,958 rna:y:5~1541 1703~1704,1831,1836~1837,1848, 1912~1915,1919~1920,1947,1959~ 1961 rna:z:1~76 1908,1923~1924,2063~2064,2251~ 2252,2255,2450~2451,2585,2601~ 2602 rna:2:1~76 1850~1852,1892,2112,2169,2394~ 2395,2421~2422,2432
2581	4v4j:x (3.83Å)	120	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS000080DFF2	RF00001	Thermus thermophilus HB27 262724	17940016		Assembly1 rna:w:1~2902 78~80,89B,90,96~100
2582	4v4j:y (3.83Å)	1514	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS000080E229	RF00177 RF01959 RF01960	Thermus thermophilus HB27 262724	17940016		Assembly1 rna:w:1~2902 702,783~784,899,1407~1409,1428 ~1429,1473,1483~1485,1493~1494 ,1517 rna:z:1~76 790,966,1229~1230,1338~1341,14 00 rna:2:1~76 694~695 rna:3:1~18 530,693,723,856,1400~1402,1493 ,1498,1506,1531~1532,1534~1541
2583	4v4j:z (3.83Å)	77	GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation	URS00001BBAFC	RF00005	Thermus thermophilus HB27 262724	17940016		Assembly1 rna:w:1~2902 12~13,24,74~76 rna:y:5~1541 29~32,34,38~41 rna:3:1~18 34~37
2584	4v4n:A1 (9.0Å)	2969	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS00005F73E8	RF02540 RF00002	Methanocaldococcus jannaschii 2190	24153188		Assembly1 rna:B1:1~77 2235,2291,2513~2514,2537~2540 rna:B2:1~1495 1975~1976,2037,2039,2043,2083~ 2084 rna:A3:1~126 997~1000,1051~1054,1088,1113,1 121,1136,1161~1162,1164~1166
2585	4v4n:A3 (9.0Å)	126	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS000000EE76	RF00001	Methanocaldococcus jannaschii 2190	24153188		Assembly1 rna:A1:7~3046 77~79,84~89,91,98,100~102
2586	4v4n:B1 (9.0Å)	77	GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation	URS00001D39A7	RF00005	Methanocaldococcus jannaschii 2190	24153188		Assembly1 rna:B2:1~1495 34,37~38 rna:A1:7~3046 57~58,75~77
2587	4v4n:B2 (9.0Å)	1495	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS000012A2B3	RF00177 RF01959 RF01960	Methanocaldococcus jannaschii 2190	24153188		Assembly1 rna:B1:1~77 743~744,1300~1301 rna:A1:7~3046 737~738,1367,1369,1378,1438~14 39
2588	4v4p:AA (5.5Å)	2872	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS000080E08B	RF02540 RF02541 RF00002	Thermus thermophilus HB8 300852	15802605		Assembly1 rna:AB:-1~120 861~863,915~916,918~919 rna:BA:5~1542 1689,1701~1704,1836~1837,1848, 1912,1919~1920,1947~1948,1959~ 1961 rna:BB:1~76 881~882,897~898,1942,2482,2506 ~2508,2555,2573,2602 rna:BC:1~76 1909,1922~1924,2063,2251~2252, 2439,2451,2506,2585,2601~2602
2589	4v4p:AB (5.5Å)	123	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS00001170B4	RF00001	Thermus thermophilus HB8 300852	15802605		Assembly1 rna:AA:1~2902 78~81,96~97,99~100
2590	4v4p:B1 (5.5Å)	66	N/A	N/A	N/A	N/A	15802605		Assembly1 rna:BA:5~1542 48~57,59~62,64,66~67 rna:BB:1~76 63~66 rna:BC:1~76 59~62
2591	4v4p:BA (5.5Å)	1515	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS000080E226	RF00177 RF01959 RF01960	Thermus thermophilus HB8 300852	15802605		Assembly1 rna:AA:1~2902 702,783~784,899,1407~1408,1418 ,1429~1430,1473~1475,1483~1484 ,1494,1496,1517 rna:BB:1~76 518,530,1054 rna:BC:1~76 790,966,1229~1230,1338~1341,14 00 rna:B1:6~71 530,789~791,926,1196,1397,1400 ,1403,1493,1498,1503,1507,1534 ~1541
2592	4v4p:BB (5.5Å)	76	GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation	URS000011107D	RF00005	Thermus thermophilus HB8 300852	15802605		Assembly1 rna:AA:1~2902 19,55~56,64,71~72,74~76 rna:BA:5~1542 34~35 rna:B1:6~71 33~38
2593	4v4p:BC (5.5Å)	76	GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation	URS000011107D	RF00005	Thermus thermophilus HB8 300852	15802605		Assembly1 rna:AA:1~2902 11~13,24~25,74~76 rna:BA:5~1542 29~32,34,38~41 rna:B1:6~71 34~38
2594	4v4q:AA (3.46Å)	1530	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS00000ABFE9	RF00177 RF01959 RF01960	Escherichia coli 562	16272117		Assembly1 rna:BB:1~2903 702,783~784,899,1408~1409,1418 ,1428~1430,1473~1475,1483~1484 ,1492,1494~1495,1517
2595	4v4q:BA (3.46Å)	117	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS0000049E57	RF00001	Escherichia coli 562	16272117		Assembly1 rna:BB:1~2903 78~81,89~90,96~97,99~100
2596	4v4q:BB (3.46Å)	2841	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS00004B0F34	RF02540 RF02541	Escherichia coli 562	16272117		Assembly1 rna:AA:5~1534 1686,1689,1700~1704,1832,1836~ 1837,1846,1848,1895,1912~1913, 1919,1947~1948,1959~1961 rna:BA:2~118 861~864,915,917~919,958
2597	4v4q:CA (3.46Å)	1530	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS00000ABFE9	RF00177 RF01959 RF01960	Escherichia coli 562	16272117		Assembly2 rna:DB:1~2903 702,783~784,899,1407~1409,1418 ,1428~1430,1473~1475,1483~1484 ,1492,1494~1496,1517
2598	4v4q:DA (3.46Å)	117	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS0000049E57	RF00001	Escherichia coli 562	16272117		Assembly2 rna:DB:1~2903 41,78~81,89~90,96~97,99~101
2599	4v4q:DB (3.46Å)	2841	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS00004B0F34	RF02540 RF02541	Escherichia coli 562	16272117		Assembly2 rna:CA:5~1534 1686,1689,1700,1702~1704,1832, 1836~1837,1846,1848,1912~1916, 1919~1920,1947~1948,1959~1961 rna:DA:2~118 861~864,916~919,958,2340
2600	4v4r:AA (5.9Å)	1515	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS000080E226	RF00177 RF01959 RF01960	Thermus thermophilus HB8 300852	16377566		Assembly1 rna:AV:1~76 790,966,1229~1230,1338~1341,14 00 rna:AW:1~76 1339~1340 rna:AX:114~130 926,1400,1505 rna:BA:1~2902 702,784,899,1407~1409,1418,142 9,1474~1475,1483~1485,1494~149 6,1517

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Reference:

Chengxin Zhang, P. Lydia Freddolino (2023) FURNA: a database for function annotations of RNA structures, bioRxiv 2023.12.19.572314.

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