SEQ2FUN

FURNA
Download all results in tab-seperated text for 14210 RNAs.
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  • Hover over Ligand to view the name of the ligand and the ligand-binding nucleotides on the RNA.

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    # PDB
    (Resolution)    		 Length EC number
    & GO term     		RNAcentral Rfam Taxon PubMed ATtRACT
    motif     		Ligand &
    binding nucleotides
    2601 4v4r:AV
    (5.9Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000011107D RF00005 Escherichia
    coli
    562    		 16377566 Assembly1
    rna:AA:5~1542 29~34,38,40~41
    rna:AX:114~130 34~37
    rna:BA:1~2902 2,11~13,25,74~76
    2602 4v4r:AW
    (5.9Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000011107D RF00005 Escherichia
    coli
    562    		 16377566 Assembly1
    rna:AA:5~1542 34~35
    rna:BA:1~2902 75~76
    2603 4v4r:AX
    (5.9Å)
    		 17 N/A URS000080DE6C N/A synthetic
    construct
    32630    		 16377566 Assembly1
    rna:AA:5~1542 116,118,120
    rna:AV:1~76 116~118
    2604 4v4r:BA
    (5.9Å)
    		 2814 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E1D6 RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    HB8
    300852    		 16377566 Assembly1
    rna:AA:5~1542 1689,1701,1703,1832,1837,1846,
    1848,1912~1913,1916,1919~1920,
    1947~1948,1959~1961
    rna:AV:1~76 1908~1909,1922~1924,2063,2251~
    2253,2255,2585,2601~2603
    rna:AW:1~76 2394~2395,2421~2422
    rna:BB:-1~120 861~863,915,918~919,958
    2605 4v4r:BB
    (5.9Å)
    		 123 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001170B4 RF00001 Thermus
    thermophilus
    274    		 16377566 Assembly1
    rna:BA:1~2902 78~81,88,90,97,99~100
    2606 4v4s:AA
    (6.76Å)
    		 1515 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E226 RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 16377566 Assembly1
    rna:AV:1~76 790,966,1229~1230,1338~1341,14
    00
    rna:AW:1~76 1339~1340
    rna:AX:114~130 926,1493,1498
    rna:BA:1~2902 702,899,1407~1408,1418,1429,14
    74~1475,1483~1485,1517
    2607 4v4s:AV
    (6.76Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000011107D RF00005 Escherichia
    coli
    562    		 16377566 Assembly1
    rna:AA:5~1542 29~34,38,40~41
    rna:AX:114~130 35~37
    rna:BA:1~2902 2,11~13,25,74~76
    2608 4v4s:AW
    (6.76Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000011107D RF00005 Escherichia
    coli
    562    		 16377566 Assembly1
    rna:AA:5~1542 34~35
    rna:BA:1~2902 75~76
    2609 4v4s:AX
    (6.76Å)
    		 17 N/A URS000080DE96 N/A synthetic
    construct
    32630    		 16377566 Assembly1
    rna:AA:5~1542 116~117,120
    rna:AV:1~76 116~118
    2610 4v4s:BA
    (6.76Å)
    		 2814 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E1D6 RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    HB8
    300852    		 16377566 Assembly1
    rna:AA:5~1542 1689,1701,1703,1832,1846,1848,
    1912,1919~1920,1947~1948,1959~
    1961
    rna:AV:1~76 1908~1909,1922~1924,2063,2251~
    2253,2255,2601~2602
    rna:AW:1~76 2394~2395,2421~2422
    rna:BB:-1~120 861~863,915,918~919,958
    2611 4v4s:BB
    (6.76Å)
    		 123 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001170B4 RF00001 Thermus
    thermophilus
    274    		 16377566 Assembly1
    rna:BA:1~2902 78~80,88,90,97,99~100
    2612 4v4t:AA
    (6.46Å)
    		 1515 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E226 RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 16377566 Assembly1
    rna:AV:1~76 790,966,1229~1230,1338~1341,14
    00
    rna:AX:114~130 926,1493,1498,1505
    rna:BA:1~2902 702,784,899,1407~1409,1418,142
    9,1474~1475,1483~1485,1494~149
    5,1517
    2613 4v4t:AV
    (6.46Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000011107D RF00005 Escherichia
    coli
    562    		 16377566 Assembly1
    rna:AA:5~1542 29~34,38,40~41
    rna:AX:114~130 35~37
    rna:BA:1~2902 11~13,24~25,74~76
    2614 4v4t:AW
    (6.46Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000011107D RF00005 Escherichia
    coli
    562    		 16377566 Assembly1
    rna:AA:5~1542 34~35
    rna:BA:1~2902 75~76
    2615 4v4t:AX
    (6.46Å)
    		 17 N/A URS000080DE6C N/A synthetic
    construct
    32630    		 16377566 Assembly1
    rna:AA:5~1542 116~117,120
    rna:AV:1~76 116~118
    2616 4v4t:BA
    (6.46Å)
    		 2814 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E1D6 RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    HB8
    300852    		 16377566 Assembly1
    rna:AA:5~1542 1689,1701,1703,1832,1837,1846,
    1848,1912~1913,1916,1919~1920,
    1947~1948,1959~1961
    rna:AV:1~76 1908~1909,1922~1924,2251~2253,
    2585,2601~2603
    rna:AW:1~76 2394~2395,2421~2422
    rna:BB:-1~120 861~863,915~916,918~919,958
    2617 4v4t:BB
    (6.46Å)
    		 123 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001170B4 RF00001 Thermus
    thermophilus
    274    		 16377566 Assembly1
    rna:BA:1~2902 78~81,88,90,97,99~100
    2618 4v4v:AA
    (15.0Å)
    		 1488 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DE6D RF00177
    RF01959
    RF01960    		 Escherichia
    coli
    562    		 16713583
    16714018    		 Assembly1
    rna:AU:1~76 530,1492~1493
    rna:AV:1~76 966,1229~1230,1400
    rna:B0:16~2902 701~703,783~785,791,1408~1409,
    1418,1429~1430,1483~1485,1494~
    1495
    2619 4v4v:AU
    (15.0Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000011107D RF00005 Escherichia
    coli
    562    		 16713583
    16714018    		 Assembly1
    rna:AA:5~1534 34,36~37
    rna:AV:1~76 73~74
    rna:B0:16~2902 63~64,74~76
    2620 4v4v:AV
    (15.0Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000011107D RF00005 Escherichia
    coli
    562    		 16713583
    16714018    		 Assembly1
    rna:AA:5~1534 30~31,34
    rna:AU:1~76 75~76
    rna:B0:16~2902 11~12,24
    2621 4v4v:AW
    (15.0Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000011107D RF00005 Escherichia
    coli
    562    		 16713583
    16714018    		 Assembly1
    rna:B0:16~2902 2~3,17,71,76
    2622 4v4v:B0
    (15.0Å)
    		 2740 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E20A RF02540
    RF02541    		 Escherichia
    coli
    562    		 16713583
    16714018    		 Assembly1
    rna:AA:5~1534 1703~1704,1836~1838,1847~1848,
    1911~1914,1922,1948~1949,1959~
    1960
    rna:AU:1~76 1944,2482~2483,2509,2552,2554~
    2557
    rna:AV:1~76 1907~1908,1924
    rna:AW:1~76 1852~1853,1880~1881,2112,2433
    rna:B9:6~114 863,914,917~919,1025,2340~2341
    2623 4v4v:B9
    (15.0Å)
    		 108 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E173 RF00001 Escherichia
    coli
    562    		 16713583
    16714018    		 Assembly1
    rna:B0:16~2902 41,70,80~81,88,100
    2624 4v4w:AA
    (15.0Å)
    		 1488 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DE6D RF00177
    RF01959
    RF01960    		 Escherichia
    coli
    562    		 16713583
    16714018    		 Assembly1
    rna:AU:1~76 530,955,1492~1493
    rna:AV:1~76 790,1230~1231,1339~1341,1384
    rna:B0:16~2902 702,762,784~785,1407~1409,1418
    ~1419,1429,1473,1483~1485,1494
    ~1495
    2625 4v4w:AU
    (15.0Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000011107D RF00005 Escherichia
    coli
    562    		 16713583
    16714018    		 Assembly1
    rna:AA:5~1534 35~37,41~42
    rna:AV:1~76 17,72~73
    rna:B0:16~2902 63~64,71~72,74~76
    2626 4v4w:AV
    (15.0Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000011107D RF00005 Escherichia
    coli
    562    		 16713583
    16714018    		 Assembly1
    rna:AA:5~1534 29~34,38
    rna:AU:1~76 47,75~76
    rna:AW:1~76 33,37~39
    rna:B0:16~2902 3,12,76
    2627 4v4w:AW
    (15.0Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000011107D RF00005 Escherichia
    coli
    562    		 16713583
    16714018    		 Assembly1
    rna:AV:1~76 34~36
    rna:B0:16~2902 3~4,17,56,76
    2628 4v4w:B0
    (15.0Å)
    		 2740 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E20A RF02540
    RF02541    		 Escherichia
    coli
    562    		 16713583
    16714018    		 Assembly1
    rna:AA:5~1534 715,1702~1704,1837~1838,1847~1
    848,1911~1913,1918~1919,1931,1
    948~1950,1959~1960
    rna:AU:1~76 1915,1942~1943,2482~2483,2548~
    2549,2556~2559
    rna:AV:1~76 1924,2255,2556
    rna:AW:1~76 1880~1881,2111~2112,2122~2123,
    2392,2424,2429~2430,2433
    rna:B9:6~114 862,914~915,917~918,2340
    2629 4v4w:B9
    (15.0Å)
    		 108 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E173 RF00001 Escherichia
    coli
    562    		 16713583
    16714018    		 Assembly1
    rna:B0:16~2902 41,80~82,100
    2630 4v4x:AA
    (5.0Å)
    		 1515 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E226 RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 17051149 Assembly1
    rna:AC:1~76 790,966,1229~1230,1338~1341,14
    00,1539~1541
    rna:AD:1~76 693~694,1382,1536~1537
    rna:BA:1~2902 702,783~784,899,1407~1409,1418
    ,1429~1430,1473,1475,1483~1485
    ,1494~1496,1517
    2631 4v4x:AC
    (5.0Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    562    		 17051149 Assembly1
    rna:AA:5~1542 29~32,34~41
    rna:BA:1~2902 2,11~13,25,74~76
    2632 4v4x:AD
    (5.0Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080DFDE RF00005 Thermus
    thermophilus
    HB8
    300852    		 17051149 Assembly1
    rna:AA:5~1542 34~38
    rna:BA:1~2902 4,17,19,56,70~71,75~76
    2633 4v4x:BA
    (5.0Å)
    		 2889 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E1D6 RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    HB8
    300852    		 17051149 Assembly1
    rna:AA:5~1542 1689,1702~1704,1832,1836~1837,
    1848,1912,1919~1920,1947~1948,
    1959~1961
    rna:AC:1~76 1907~1909,1922~1924,2063,2251~
    2253,2255,2451,2506,2585,2602
    rna:AD:1~76 200,248,1850~1852,1892~1893,21
    12,2169,2431~2432
    rna:BB:-1~120 861~863,915~916,918~919
    2634 4v4x:BB
    (5.0Å)
    		 123 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001170B4 RF00001 Thermus
    thermophilus
    HB8
    300852    		 17051149 Assembly1
    rna:BA:1~2902 78~81,96~97,99~100
    2635 4v4y:A1
    (5.5Å)
    		 50 N/A N/A N/A N/A 17051149 Assembly1
    rna:AA:5~1542 23~33,37~42,46~47
    rna:AC:1~76 40~42
    rna:AD:1~76 37~38
    rna:AB:1~76 43~46
    2636 4v4y:AA
    (5.5Å)
    		 1515 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E226 RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 17051149 Assembly1
    rna:A1:3~52 693,723,926,1196,1397,1400,149
    8,1505,1531~1541
    rna:AC:1~76 790,966,1229~1230,1338~1341,14
    00
    rna:AD:1~76 693,1382
    rna:AB:1~76 530,1054,1493
    rna:BA:1~2902 702,783~784,899,1407~1408,1418
    ,1429~1430,1475,1483~1485,1495
    ~1496,1517
    2637 4v4y:AB
    (5.5Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    562    		 17051149 Assembly1
    rna:AA:5~1542 34~37
    rna:A1:3~52 34~37
    rna:BA:1~2902 12,51~53,62~63,71,74~76
    2638 4v4y:AC
    (5.5Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    562    		 17051149 Assembly1
    rna:AA:5~1542 29~32,34,38~41
    rna:A1:3~52 34~37
    rna:BA:1~2902 11~13,25,74~76
    2639 4v4y:AD
    (5.5Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    562    		 17051149 Assembly1
    rna:AA:5~1542 34,37
    rna:A1:3~52 35~36
    rna:BA:1~2902 4,19~20,56,70~71,76
    2640 4v4y:BA
    (5.5Å)
    		 2889 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E1D6 RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    HB8
    300852    		 17051149 Assembly1
    rna:AA:5~1542 1689,1703~1704,1836~1837,1848,
    1912,1918~1920,1947~1948,1959~
    1961
    rna:AC:1~76 1908~1909,1922~1924,2251~2253,
    2439,2451,2506,2585,2601~2602
    rna:AD:1~76 248,1850~1852,1892~1893,2112,2
    169,2421~2422,2431~2432
    rna:AB:1~76 1915,1942,2470~2472,2482~2483,
    2506~2508,2553~2556,2573,2583,
    2602
    rna:BB:-1~120 861~863,915~916,918~919,2334
    2641 4v4y:BB
    (5.5Å)
    		 123 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001170B4 RF00001 Thermus
    thermophilus
    HB8
    300852    		 17051149 Assembly1
    rna:BA:1~2902 12,78~81,96~97,99~100
    2642 4v4z:A1
    (4.51Å)
    		 27 N/A N/A N/A N/A 17051149 Assembly1
    rna:AA:5~1542 4~13,15~18,22,27
    rna:AC:1~76 16~18
    rna:AD:1~76 14~15
    2643 4v4z:AA
    (4.51Å)
    		 1515 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E226 RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 17051149 Assembly1
    rna:AC:1~76 790,966,1229~1230,1338~1341,14
    00
    rna:AD:1~76 693~694,1382
    rna:A1:1~27 12,506,530,693,723,791~792,926
    ,1397,1400~1401,1403,1498,1503
    ,1505,1507,1534~1541
    rna:BA:1~2902 702,784,899,1407~1408,1418,142
    9~1430,1473,1475,1483~1485,149
    5~1496,1517
    2644 4v4z:AC
    (4.51Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080DFF5 RF00005 Escherichia
    coli
    562    		 17051149 Assembly1
    rna:AA:5~1542 29~32,34,38~41
    rna:A1:1~27 34~37
    rna:BA:1~2902 11~13,24~25,74~76
    2645 4v4z:AD
    (4.51Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080DFDE RF00005 Thermus
    thermophilus
    HB8
    300852    		 17051149 Assembly1
    rna:AA:5~1542 34,37~38
    rna:A1:1~27 35~36
    rna:BA:1~2902 4,19,56,70~71,76
    2646 4v4z:BA
    (4.51Å)
    		 2889 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E1D6 RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    HB8
    300852    		 17051149 Assembly1
    rna:AA:5~1542 1689,1702~1704,1837,1848,1912,
    1919~1920,1947~1948,1959~1961
    rna:AC:1~76 1907~1909,1922~1924,2251~2253,
    2451,2506,2585,2602
    rna:AD:1~76 248,1850~1852,1892~1893,2112,2
    169,2394~2395,2421~2422,2431~2
    432
    rna:BB:-1~120 861~863,915~916,918~919,2334
    2647 4v4z:BB
    (4.51Å)
    		 123 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001170B4 RF00001 Thermus
    thermophilus
    HB8
    300852    		 17051149 Assembly1
    rna:BA:1~2902 12,78~81,96~97,99~100
    2648 4v50:AA
    (3.22Å)
    		 1530 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00000ABFE9 RF00177
    RF01959
    RF01960    		 Escherichia
    coli
    562    		 17038497 Assembly1
    rna:AW:27~43 790,966,1229~1230,1338~1341,14
    00
    rna:AX:1~6 790,926,1400,1402~1403,1493,14
    97~1498
    rna:BB:1~2903 702,784,791,899,1407~1410,1418
    ,1427~1429,1473~1475,1483~1484
    ,1492,1494~1496,1517
    2649 4v50:AW
    (3.22Å)
    		 17 N/A URS000080E2A3 N/A synthetic
    construct
    32630    		 17038497 Assembly1
    rna:AA:5~1534 30~32,34,38~41
    rna:AX:1~6 34~37
    2650 4v50:BA
    (3.22Å)
    		 117 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000049E57 RF00001 Escherichia
    coli
    562    		 17038497 Assembly1
    rna:BB:1~2903 41,78~81,89~90,96~97,99~100
    2651 4v50:BB
    (3.22Å)
    		 2841 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B0F34 RF02540
    RF02541    		 Escherichia
    coli
    562    		 17038497 Assembly1
    rna:AA:5~1534 1686~1687,1689,1700~1704,1832,
    1836~1837,1846,1848,1912~1916,
    1919~1920,1947~1948,1959~1961
    rna:BA:2~118 861~864,915,917~919,958,2339
    2652 4v50:CA
    (3.22Å)
    		 1530 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00000ABFE9 RF00177
    RF01959
    RF01960    		 Escherichia
    coli
    562    		 17038497 Assembly2
    rna:CW:27~43 790,966,1229~1230,1338~1341,14
    00
    rna:CX:1~6 790,926,1400,1402~1403,1493,14
    97~1498
    rna:DB:1~2903 702,784,791,899,1407~1409,1418
    ,1428~1429,1473~1475,1483~1484
    ,1492~1496,1517
    2653 4v50:CW
    (3.22Å)
    		 17 N/A URS000080E2A3 N/A synthetic
    construct
    32630    		 17038497 Assembly2
    rna:CA:5~1534 30~32,34,38~41
    rna:CX:1~6 34~37
    2654 4v50:DA
    (3.22Å)
    		 117 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000049E57 RF00001 Escherichia
    coli
    562    		 17038497 Assembly2
    rna:DB:1~2903 41,78~81,89~90,96~97,99~100
    2655 4v50:DB
    (3.22Å)
    		 2841 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B0F34 RF02540
    RF02541    		 Escherichia
    coli
    562    		 17038497 Assembly2
    rna:CA:5~1534 1689,1700~1704,1832,1837,1846,
    1848,1912~1916,1919~1920,1947~
    1949,1959~1961
    rna:DA:2~118 861~864,915,917~919,958,2339
    2656 4v51:AA
    (2.8Å)
    		 1504 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E226 RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 16959973 Assembly1
    rna:AV:1~76 790,966,1229~1230,1338~1340,14
    00
    rna:AX:12~22 926~928,1397,1400,1402~1403,14
    92~1493,1498,1503
    rna:AY:26~44 530,1054,1493
    rna:BA:6~2897 702,784,899,1407~1409,1418,142
    9,1442A,1473~1475,1483~1484,14
    94~1496,1517
    2657 4v51:AV
    (2.8Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    K-12
    83333    		 16959973 Assembly1
    rna:AA:5~1531 30~31,34,38~41
    rna:AW:1~76 39~40
    rna:AX:12~22 34~37
    rna:BA:6~2897 11~13,24~25,74~76
    2658 4v51:AW
    (2.8Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    K-12
    83333    		 16959973 Assembly1
    rna:AV:1~76 35~36
    rna:BA:6~2897 17,19,56,72,76
    2659 4v51:AX
    (2.8Å)
    		 11 N/A N/A N/A synthetic
    construct
    32630    		 16959973 Assembly1
    rna:AA:5~1531 13,15~20,22
    rna:AV:1~76 16~18
    rna:AY:26~44 19~22
    2660 4v51:AY
    (2.8Å)
    		 19 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    K-12
    83333    		 16959973 Assembly1
    rna:AA:5~1531 34~37
    rna:AX:12~22 34~37
    rna:BA:6~2897 37~38
    2661 4v51:BA
    (2.8Å)
    		 2772 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E25D RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    HB8
    300852    		 16959973 Assembly1
    rna:AA:5~1531 1689,1700~1704,1832,1836~1837,
    1846,1848,1912~1913,1915~1916,
    1919~1920,1947~1949,1959~1960,
    2863
    rna:AV:1~76 1907~1909,1922~1924,2064,2251~
    2253,2450~2451,2602
    rna:AW:1~76 1851,2112,2168,2180~2181,2394~
    2395,2421~2422
    rna:BB:1~119 861~864,915,917~919,1026
    2662 4v51:BB
    (2.8Å)
    		 119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00005F2F4B RF00001 Thermus
    thermophilus
    HB8
    300852    		 16959973 Assembly1
    rna:BA:6~2897 78~81,88,97~98,100~101
    2663 4v51:CA
    (2.8Å)
    		 1504 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E226 RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 16959973 Assembly2
    rna:CV:1~76 790,966,1229~1230,1338~1340,14
    00
    rna:CX:12~22 530,926,928,1397,1400~1401,149
    2~1493,1498,1503,1505~1506
    rna:CY:26~44 530~531,1054,1493
    rna:DA:6~2897 702,784,899,1407~1409,1418,142
    9~1430,1442A,1474~1475,1483~14
    84,1494~1496,1517
    2664 4v51:CV
    (2.8Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    K-12
    83333    		 16959973 Assembly2
    rna:CA:5~1531 30~32,34,38,40~41
    rna:CW:1~76 39~40
    rna:CX:12~22 34~37
    rna:DA:6~2897 11~13,24~25,74~76
    2665 4v51:CW
    (2.8Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    K-12
    83333    		 16959973 Assembly2
    rna:CV:1~76 35~36
    rna:DA:6~2897 17,19,56,71~72,76
    2666 4v51:CX
    (2.8Å)
    		 11 N/A N/A N/A synthetic
    construct
    32630    		 16959973 Assembly2
    rna:CA:5~1531 13,15~22
    rna:CV:1~76 16~18
    rna:CY:26~44 19~22
    2667 4v51:CY
    (2.8Å)
    		 19 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    K-12
    83333    		 16959973 Assembly2
    rna:CA:5~1531 34~37
    rna:CX:12~22 34~37
    rna:DA:6~2897 37~38
    2668 4v51:DA
    (2.8Å)
    		 2772 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E25D RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    HB8
    300852    		 16959973 Assembly2
    rna:CA:5~1531 1689,1700~1701,1703~1704,1832,
    1837,1846,1848,1912~1916,1919~
    1920,1947~1948,1959~1960,2864
    rna:CV:1~76 1907~1909,1922~1924,2251~2253,
    2450~2451,2602
    rna:CW:1~76 1851~1852,2112,2168,2180,2394~
    2395,2421~2422
    rna:DB:1~119 861~863,917~919,1026
    2669 4v51:DB
    (2.8Å)
    		 119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00005F2F4B RF00001 Thermus
    thermophilus
    HB8
    300852    		 16959973 Assembly2
    rna:DA:6~2897 78~81,88,97~98,100~101
    2670 4v52:AA
    (3.21Å)
    		 1530 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00000ABFE9 RF00177
    RF01959
    RF01960    		 Escherichia
    coli
    562    		 17660832 Assembly1
    rna:BB:1~2903 702,783~784,899,1407~1409,1418
    ,1428~1429,1473~1475,1483~1484
    ,1493~1495,1517
    2671 4v52:BA
    (3.21Å)
    		 117 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000049E57 RF00001 Escherichia
    coli
    562    		 17660832 Assembly1
    rna:BB:1~2903 41,78~81,89,96~97,99~100
    2672 4v52:BB
    (3.21Å)
    		 2841 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B0F34 RF02540
    RF02541    		 Escherichia
    coli
    562    		 17660832 Assembly1
    rna:AA:5~1534 1689,1700~1704,1832,1836~1837,
    1846,1848,1895,1912~1914,1916,
    1919~1920,1947~1949,1959~1960
    rna:BA:2~118 861~864,915,917~919,958,2339~2
    340
    2673 4v52:CA
    (3.21Å)
    		 1530 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00000ABFE9 RF00177
    RF01959
    RF01960    		 Escherichia
    coli
    562    		 17660832 Assembly2
    rna:DB:1~2903 702,783~784,899,1407~1409,1418
    ,1420,1429,1473~1475,1483~1484
    ,1493~1496,1517
    2674 4v52:DA
    (3.21Å)
    		 117 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000049E57 RF00001 Escherichia
    coli
    562    		 17660832 Assembly2
    rna:DB:1~2903 41,78~81,89,96~97,99~100
    2675 4v52:DB
    (3.21Å)
    		 2841 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B0F34 RF02540
    RF02541    		 Escherichia
    coli
    562    		 17660832 Assembly2
    rna:CA:5~1534 1689,1700~1704,1832,1836~1837,
    1846,1848,1912~1916,1919~1920,
    1947~1950,1959~1961
    rna:DA:2~118 861~864,915,917~919,958,2340
    2676 4v53:AA
    (3.54Å)
    		 1530 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00000ABFE9 RF00177
    RF01959
    RF01960    		 Escherichia
    coli
    562    		 17660832 Assembly1
    rna:BB:1~2903 702,783~784,899,1407~1409,1418
    ,1428~1429,1473~1475,1483~1484
    ,1493~1496,1517
    2677 4v53:BA
    (3.54Å)
    		 117 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000049E57 RF00001 Escherichia
    coli
    562    		 17660832 Assembly1
    rna:BB:1~2903 41,78~81,89,96~97,99~101
    2678 4v53:BB
    (3.54Å)
    		 2841 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B0F34 RF02540
    RF02541    		 Escherichia
    coli
    562    		 17660832 Assembly1
    rna:AA:5~1534 1689,1700~1704,1832,1836~1837,
    1848,1895,1912~1916,1919~1920,
    1947~1949,1959~1960
    rna:BA:2~118 861~864,915,917~919,958,2339~2
    340
    2679 4v53:CA
    (3.54Å)
    		 1530 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00000ABFE9 RF00177
    RF01959
    RF01960    		 Escherichia
    coli
    562    		 17660832 Assembly2
    rna:DB:1~2903 702,783~784,899,1407~1409,1418
    ,1420,1429,1473~1475,1483~1484
    ,1493~1496,1517
    2680 4v53:DA
    (3.54Å)
    		 117 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000049E57 RF00001 Escherichia
    coli
    562    		 17660832 Assembly2
    rna:DB:1~2903 41,78~81,89,96~97,99~100
    2681 4v53:DB
    (3.54Å)
    		 2841 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B0F34 RF02540
    RF02541    		 Escherichia
    coli
    562    		 17660832 Assembly2
    rna:CA:5~1534 1689,1700~1704,1832,1836~1837,
    1848,1912~1913,1915~1916,1919~
    1920,1947~1948,1950,1959~1961
    rna:DA:2~118 861~863,915,917~919,958,2340
    2682 4v54:AA
    (3.3Å)
    		 1530 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00000ABFE9 RF00177
    RF01959
    RF01960    		 Escherichia
    coli
    562    		 17660832 Assembly1
    rna:BB:1~2903 702,784,899,1418,1428~1430,147
    3~1475,1483~1484
    2683 4v54:BA
    (3.3Å)
    		 117 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000049E57 RF00001 Escherichia
    coli
    562    		 17660832 Assembly1
    rna:BB:1~2903 41,78~81,89~90,96~97,99~101
    2684 4v54:BB
    (3.3Å)
    		 2841 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B0F34 RF02540
    RF02541    		 Escherichia
    coli
    562    		 17660832 Assembly1
    rna:AA:5~1534 1686,1700~1704,1832,1837,1846,
    1848,1895,1947~1949,1959~1961
    rna:BA:2~118 861~864,915~919,958~959,2339
    2685 4v54:CA
    (3.3Å)
    		 1530 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00000ABFE9 RF00177
    RF01959
    RF01960    		 Escherichia
    coli
    562    		 17660832 Assembly2
    rna:DB:1~2903 702,783~784,899,1407~1409,1418
    ,1428~1430,1473~1475,1483~1484
    ,1492,1494~1496,1517
    2686 4v54:DA
    (3.3Å)
    		 117 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000049E57 RF00001 Escherichia
    coli
    562    		 17660832 Assembly2
    rna:DB:1~2903 78~81,89~90,96~97,99~100
    2687 4v54:DB
    (3.3Å)
    		 2841 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B0F34 RF02540
    RF02541    		 Escherichia
    coli
    562    		 17660832 Assembly2
    rna:CA:5~1534 1689,1700~1704,1832,1836~1837,
    1846,1848,1912~1916,1919~1920,
    1947~1949,1959~1961
    rna:DA:2~118 861~864,915~919,958~959
    2688 4v55:AA
    (4.0Å)
    		 1530 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00000ABFE9 RF00177
    RF01959
    RF01960    		 Escherichia
    coli
    562    		 17660832 Assembly1
    rna:BB:1~2903 702,783~784,899,1407~1409,1418
    ,1428~1429,1473~1475,1483~1484
    ,1494~1496,1517
    2689 4v55:BA
    (4.0Å)
    		 117 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000049E57 RF00001 Escherichia
    coli
    562    		 17660832 Assembly1
    rna:BB:1~2903 41,78~81,89~90,96~97,99~101
    2690 4v55:BB
    (4.0Å)
    		 2841 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B0F34 RF02540
    RF02541    		 Escherichia
    coli
    562    		 17660832 Assembly1
    rna:AA:5~1534 1686,1689,1700~1704,1832,1836~
    1837,1848,1895,1912~1913,1916,
    1919~1920,1947~1949,1959~1961
    rna:BA:2~118 861~864,915~919,958
    2691 4v55:CA
    (4.0Å)
    		 1530 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00000ABFE9 RF00177
    RF01959
    RF01960    		 Escherichia
    coli
    562    		 17660832 Assembly2
    rna:DB:1~2903 702,784,899,1407~1409,1418,142
    8~1430,1473~1475,1483~1484,149
    3~1496,1517
    2692 4v55:DA
    (4.0Å)
    		 117 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000049E57 RF00001 Escherichia
    coli
    562    		 17660832 Assembly2
    rna:DB:1~2903 41,78~81,89,96~97,99~101
    2693 4v55:DB
    (4.0Å)
    		 2841 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B0F34 RF02540
    RF02541    		 Escherichia
    coli
    562    		 17660832 Assembly2
    rna:CA:5~1534 1689,1700~1704,1832,1836~1837,
    1848,1912~1913,1915~1916,1919~
    1920,1947~1948,1959~1961
    rna:DA:2~118 861~863,915~919,958
    2694 4v56:AA
    (3.93Å)
    		 1530 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00000ABFE9 RF00177
    RF01959
    RF01960    		 Escherichia
    coli
    562    		 17696316 Assembly1
    rna:BB:1~2903 702,784,899,1407~1409,1418,142
    8~1430,1473~1475,1483~1484,149
    2,1494~1496,1517
    2695 4v56:BA
    (3.93Å)
    		 117 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000049E57 RF00001 Escherichia
    coli
    562    		 17696316 Assembly1
    rna:BB:1~2903 41,78~81,89~90,96~97,99~101
    2696 4v56:BB
    (3.93Å)
    		 2841 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B0F34 RF02540
    RF02541    		 Escherichia
    coli
    562    		 17696316 Assembly1
    rna:AA:5~1534 1689,1700~1704,1832,1836~1837,
    1846,1848,1912~1914,1916,1919~
    1920,1947~1948,1959~1960
    rna:BA:2~118 861~864,915,917~919,958,2339~2
    340
    2697 4v56:CA
    (3.93Å)
    		 1530 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00000ABFE9 RF00177
    RF01959
    RF01960    		 Escherichia
    coli
    562    		 17696316 Assembly2
    rna:DB:1~2903 702,784,899,1407~1409,1418,142
    9~1430,1473,1475,1483~1484,149
    2,1494~1496,1517
    2698 4v56:DA
    (3.93Å)
    		 117 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000049E57 RF00001 Escherichia
    coli
    562    		 17696316 Assembly2
    rna:DB:1~2903 41,78~81,89~90,96~97,99~100
    2699 4v56:DB
    (3.93Å)
    		 2841 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B0F34 RF02540
    RF02541    		 Escherichia
    coli
    562    		 17696316 Assembly2
    rna:CA:5~1534 1689,1700,1702~1704,1832,1837,
    1846,1848,1912~1916,1919~1920,
    1947~1948,1959~1961
    rna:DA:2~118 861~863,915,917~919,958,2340
    2700 4v57:AA
    (3.5Å)
    		 1530 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00000ABFE9 RF00177
    RF01959
    RF01960    		 Escherichia
    coli
    562    		 17696316 Assembly1
    rna:BB:1~2903 702,784,899,1407~1409,1418,142
    8~1430,1473~1475,1483~1484,149
    4~1496,1517
    << < 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 > >>
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    Reference:
  • Chengxin Zhang, Lydia Freddolino (2024) "FURNA: a database for function annotations of RNA structures," PLOS Biology 22(7): e3002476.