SEQ2FUN

FURNA
Download all results in tab-seperated text for 14210 RNAs.
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  • Hover over Ligand to view the name of the ligand and the ligand-binding nucleotides on the RNA.

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    # PDB
    (Resolution)    		 Length EC number
    & GO term     		RNAcentral Rfam Taxon PubMed ATtRACT
    motif     		Ligand &
    binding nucleotides
    3601 4v9b:CA
    (3.1Å)
    		 1506 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DEDF RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 23431179 Assembly2
    rna:CC:1~76 790,966,1229~1230,1338~1340,14
    00
    rna:C1:14~19 926,1400~1403,1493,1498,1505~1
    506
    rna:DA:1~2902 702,783~784,899~900,1407~1409,
    1418,1429~1430,1473~1475,1483~
    1484,1492~1496,1517
    3602 4v9b:CC
    (3.1Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000057545F RF00005 Thermus
    thermophilus
    HB8
    300852    		 23431179 Assembly2
    rna:CA:5~1533 30~31,34,38,40~41
    rna:C1:14~19 34~37
    rna:DA:1~2902 2~3,11~13,24~25,74~76
    3603 4v9b:CD
    (3.1Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000057545F RF00005 Thermus
    thermophilus
    HB8
    300852    		 23431179 Assembly2
    rna:C1:14~19 34~35
    rna:DA:1~2902 4,19,56,71,76
    3604 4v9b:DA
    (3.1Å)
    		 2906 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E23D RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    HB8
    300852    		 23431179 Assembly2
    rna:CA:5~1533 1689,1700~1704,1832,1836~1837,
    1846,1848,1912~1916,1919~1920,
    1947~1948,1959~1961
    rna:CC:1~76 1907~1909,1922~1924,2064,2251~
    2253,2255,2450~2451,2601~2602
    rna:CD:1~76 1850~1851,2112,2169,2394~2395,
    2421~2422,2432
    rna:DB:1M~119 861~864,915,917~919,958
    3605 4v9b:DB
    (3.1Å)
    		 122 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00005AB4A7 RF00001 Thermus
    thermophilus
    HB8
    300852    		 23431179 Assembly2
    rna:DA:1~2902 78~81,89A,96~97,99~100
    3606 4v9c:AA
    (3.3Å)
    		 1539 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00000ABFE9 RF00177
    RF01959
    RF01960    		 Escherichia
    coli
    K-12
    83333    		 22902368 Assembly1
    rna:AV:1~76 790,966,1229~1230,1338~1340,14
    00
    rna:AX:1~16 693,926,1400~1401,1498,1503,15
    05~1506,1534~1540
    rna:BA:1~2903 702,783~784,899,1407~1409,1418
    ,1428~1429,1473~1475,1483~1484
    ,1493~1496,1517
    3607 4v9c:AV
    (3.3Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    K-12
    83333    		 22902368 Assembly1
    rna:AA:2~1540 29~32,34,38~41
    rna:AX:1~16 34~37
    rna:BA:1~2903 2~3,11~13,24~25,74~76
    3608 4v9c:AX
    (3.3Å)
    		 16 N/A N/A N/A Enterobacteria
    phage
    L1
    268588    		 22902368 Assembly1
    rna:AA:2~1540 2~7,9~15
    rna:AV:1~76 13~15
    3609 4v9c:BA
    (3.3Å)
    		 2897 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B0F34 RF02540
    RF02541    		 Escherichia
    coli
    K-12
    83333    		 22902368 Assembly1
    rna:AA:2~1540 1689,1700~1704,1832,1836~1837,
    1846,1848,1912~1913,1915~1916,
    1919~1920,1947~1948,1959~1960
    rna:AV:1~76 1907~1909,1922~1924,2251~2253,
    2255,2450~2451,2601~2602
    rna:BB:2~119 861~863,915~919,958,2339
    3610 4v9c:BB
    (3.3Å)
    		 118 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000049E57 RF00001 Escherichia
    coli
    K-12
    83333    		 22902368 Assembly1
    rna:BA:1~2903 41,78~81,89,96~97,99~100
    3611 4v9c:CA
    (3.3Å)
    		 1538 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00000ABFE9 RF00177
    RF01959
    RF01960    		 Escherichia
    coli
    K-12
    83333    		 22902368 Assembly2
    rna:CV:1~76 790,966,1229~1230,1338~1340,14
    00
    rna:CX:2~16 693,926,1401,1498,1505~1506,15
    34~1539
    rna:DA:1~2903 702,783~784,1407~1409,1418,142
    0,1428~1429,1474~1475,1483~148
    4,1494~1495,1517
    3612 4v9c:CV
    (3.3Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    K-12
    83333    		 22902368 Assembly2
    rna:CA:2~1539 29~32,34,38~39,41
    rna:CX:2~16 34~37
    rna:DA:1~2903 1~2,75~76
    3613 4v9c:CX
    (3.3Å)
    		 15 N/A N/A N/A Enterobacteria
    phage
    L1
    268588    		 22902368 Assembly2
    rna:CA:2~1539 2~8,10~15
    rna:CV:1~76 13~15
    3614 4v9c:DA
    (3.3Å)
    		 2897 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B0F34 RF02540
    RF02541    		 Escherichia
    coli
    K-12
    83333    		 22902368 Assembly2
    rna:CA:2~1539 1689,1700~1701,1703~1704,1836~
    1837,1847,1912~1913,1915~1916,
    1919~1920,1947~1948,1950,1959~
    1961
    rna:CV:1~76 2394~2395,2421~2423,2432
    rna:DB:1~119 861~864,915,917~919,958,2339~2
    340
    3615 4v9c:DB
    (3.3Å)
    		 119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000049E57 RF00001 Escherichia
    coli
    K-12
    83333    		 22902368 Assembly2
    rna:DA:1~2903 41,78~81,89~90,96~97,99~100
    3616 4v9d:AA
    (3.0Å)
    		 1538 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DDC0 RF00177
    RF01959
    RF01960    		 Escherichia
    coli
    562    		 21596992 Assembly1
    rna:AV:1~76 790,966,1229~1230,1338~1341,14
    00
    rna:AX:5~19 693,788~789,926,1400~1401,1498
    ,1505~1506,1535~1539
    rna:CA:1~2903 1407~1409,1418,1420,1428~1429,
    1474~1475,1483~1484,1492,1494~
    1496,1517
    3617 4v9d:AV
    (3.0Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    K-12
    83333    		 21596992 Assembly1
    rna:AA:2~1539 29~32,34,38,40~42
    rna:AX:5~19 34~37
    rna:CA:1~2903 3~4,19,56,70~72,75~76
    3618 4v9d:AX
    (3.0Å)
    		 15 N/A N/A N/A Enterobacteria
    phage
    L1
    268588    		 21596992 Assembly1
    rna:AA:2~1539 6~10,13~18
    rna:AV:1~76 16~18
    3619 4v9d:BA
    (3.0Å)
    		 1539 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DDC0 RF00177
    RF01959
    RF01960    		 Escherichia
    coli
    562    		 21596992 Assembly2
    rna:BV:1~76 790,966,1229~1230,1338~1341,14
    00
    rna:BX:4~19 693,926,1400~1401,1498,1503,15
    05~1507,1534,1536~1540
    rna:DA:1~2903 702,783~784,899,1407~1409,1418
    ,1428~1429,1473~1475,1483~1484
    ,1492~1495,1517
    3620 4v9d:BV
    (3.0Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    K-12
    83333    		 21596992 Assembly2
    rna:BA:2~1540 30~32,34,38~41
    rna:BX:4~19 34~37
    rna:DA:1~2903 2~3,11~13,24~25,74~76
    3621 4v9d:BX
    (3.0Å)
    		 16 N/A N/A N/A Enterobacteria
    phage
    L1
    268588    		 21596992 Assembly2
    rna:BA:2~1540 5~10,12~18
    rna:BV:1~76 16~18
    3622 4v9d:CA
    (3.0Å)
    		 2897 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E25C RF02540
    RF02541    		 Escherichia
    coli
    562    		 21596992 Assembly1
    rna:AA:2~1539 1701,1703,1912~1916,1919~1920,
    1947~1948,1950,1959~1961
    rna:AV:1~76 1850~1851,1891~1893,2112,2168,
    2394~2395,2421~2422,2432
    rna:CB:1~119 861~864,915,917~919,958
    3623 4v9d:CB
    (3.0Å)
    		 119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E133 RF00001 Escherichia
    coli
    K-12
    83333    		 21596992 Assembly1
    rna:CA:1~2903 78~81,89~90,96~97,99~101
    3624 4v9d:DA
    (3.0Å)
    		 2896 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E25C RF02540
    RF02541    		 Escherichia
    coli
    562    		 21596992 Assembly2
    rna:BA:2~1540 1687,1689,1700~1704,1832,1836~
    1837,1848,1912~1913,1915~1916,
    1919~1920,1947~1948,1959~1961
    rna:BV:1~76 1907~1909,1922~1924,2251~2253,
    2255,2450~2451,2602
    rna:DB:2~119 861~864,915,917~919,958
    3625 4v9d:DB
    (3.0Å)
    		 118 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000366A67 RF00001 Escherichia
    coli
    K-12
    83333    		 21596992 Assembly2
    rna:DA:1~2903 41,78~81,89~90,96~97,99~100
    3626 4v9f:0
    (2.404Å)
    		 2808 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E02E RF02540
    RF00002    		 Haloarcula
    marismortui
    ATCC
    43049
    272569    		 23695244
    10937989    		 Assembly1
    rna:9:1~122 955~958,1011~1015,1084,1099,11
    24,1130~1132
    3627 4v9f:9
    (2.404Å)
    		 122 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00000A7E81 RF00001 Haloarcula
    marismortui
    ATCC
    43049
    272569    		 23695244
    10937989    		 Assembly1
    rna:0:8~2917 80~83,87,91,100~105
    3628 4v9h:AA
    (2.857Å)
    		 1514 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E2E6 RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 23812720 Assembly1
    rna:AV:1~76 790,966,1229,1338~1340,1400
    rna:AX:15~20 693,788,926,1400~1401,1498,150
    5~1506
    rna:BA:6~2897 702,1406~1409,1418,1429,1475,1
    483~1485,1491,1494~1496,1517
    3629 4v9h:AV
    (2.857Å)
    		 74 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    562    		 23812720 Assembly1
    rna:AA:5~1543 29~32,34,38~41
    rna:AX:15~20 34~37
    rna:BA:6~2897 3~4,19,70~72,76
    3630 4v9h:BA
    (2.857Å)
    		 2859 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E0F3 RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    HB8
    300852    		 23812720 Assembly1
    rna:AA:5~1543 1689,1703~1704,1846,1912~1913,
    1915~1916,1919~1920,1947~1948,
    1959~1961
    rna:AV:1~76 1850~1852,1891~1893,2169,2394~
    2395,2421~2422,2432
    rna:BB:1~119 861~864,915~919,958
    3631 4v9h:BB
    (2.857Å)
    		 119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00005AB4A7 RF00001 Thermus
    thermophilus
    HB8
    300852    		 23812720 Assembly1
    rna:BA:6~2897 78~81,90,97~98,100~102
    3632 4v9i:AA
    (3.3Å)
    		 1504 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E260 RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 23812587 Assembly1
    rna:AV:1~77 790,966,1229~1230,1338~1340,14
    00
    rna:AY:1~75 530,1054,1493
    rna:AX:15~21 926,1400~1401,1492~1493,1498
    rna:BA:5~2905 702,783~784,899,1407~1409,1418
    ,1429,1442A,1473~1475,1483~148
    4,1494~1496,1517
    3633 4v9i:AV
    (3.3Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    562    		 23812587 Assembly1
    rna:AA:5~1531 31~33,35,39,41~42
    rna:AX:15~21 35~38
    rna:BA:5~2905 11~13,25~26,75~77
    3634 4v9i:AW
    (3.3Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    562    		 23812587 Assembly1
    rna:AX:15~21 34~35
    rna:BA:5~2905 19,56,71~72,76
    3635 4v9i:AY
    (3.3Å)
    		 75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080E218 N/A Escherichia
    coli
    562    		 23812587 Assembly1
    rna:AA:5~1531 34~37
    rna:AX:15~21 35~37
    rna:BA:5~2905 16,37~38,56,64,71,74~75
    3636 4v9i:BA
    (3.3Å)
    		 2807 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DDD0 RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    HB8
    300852    		 23812587 Assembly1
    rna:AA:5~1531 1735,1747~1750,1862,1866~1867,
    1876,1878,1933~1934,1936~1937,
    1940~1941,1968~1969,1980~1982,
    2872~2873
    rna:AV:1~77 1928~1930,1943~1945,2262~2264,
    2461~2462,2612~2613
    rna:AW:1~76 1881~1882,2133,2190,2405~2406,
    2432~2433,2443
    rna:AY:1~75 927,940~942,1934,1963,2493~249
    4,2518,2564~2566
    rna:BB:1~119 907~910,960,962~964
    3637 4v9i:BB
    (3.3Å)
    		 119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DE2B RF00001 Thermus
    thermophilus
    HB8
    300852    		 23812587 Assembly1
    rna:BA:5~2905 78~81,97~98,100~101
    3638 4v9i:CA
    (3.3Å)
    		 1504 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E260 RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 23812587 Assembly2
    rna:CV:1~77 774,944,1211~1212,1320~1322,13
    83
    rna:CX:16~19 904,1383~1385,1476
    rna:DA:5~2905 686,767~768,877,1390~1393,1401
    ,1403,1412,1426,1451~1453,1461
    ~1462,1471~1474,1495
    3639 4v9i:CV
    (3.3Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    562    		 23812587 Assembly2
    rna:CA:6~1509 31~32,35,39~42
    rna:CX:16~19 35~38
    rna:DA:5~2905 11~13,25~26,75~77
    3640 4v9i:CW
    (3.3Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    562    		 23812587 Assembly2
    rna:DA:5~2905 17,19,71~72,76
    3641 4v9i:CY
    (3.3Å)
    		 75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080E218 N/A Escherichia
    coli
    562    		 23812587 Assembly2
    rna:CA:6~1509 36~37
    rna:DA:5~2905 12,37~38,56,64,71~72,74~75
    3642 4v9i:DA
    (3.3Å)
    		 2807 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DDD0 RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    HB8
    300852    		 23812587 Assembly2
    rna:CA:6~1509 1735,1746~1749,1862,1866~1867,
    1876,1878,1933~1937,1940~1941,
    1968~1969,1971,1980~1982,2873
    rna:CV:1~77 1928~1930,1943~1945,2085,2262~
    2264,2461~2462,2612~2613
    rna:CW:1~76 1881~1882,2133,2201,2443
    rna:CY:1~75 927,941~942,1934,1936~1937,196
    3,2493~2494,2518~2519,2564~256
    6
    rna:DB:1~119 907~909,960,962~964,1002
    3643 4v9i:DB
    (3.3Å)
    		 119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DE2B RF00001 Thermus
    thermophilus
    HB8
    300852    		 23812587 Assembly2
    rna:DA:5~2905 78~81,90,97~101
    3644 4v9j:AA
    (3.86Å)
    		 1511 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DFCE RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB27
    262724    		 23812722 Assembly1
    rna:AV:4~21 723,926,966,1400,1503,1505~150
    7,1531~1533,1535~1538
    rna:AW:1~76 966,1229~1230,1338~1341
    rna:BA:6~2897 702,1407~1409,1418,1429~1430,1
    440C,1473~1475,1483~1484,1493~
    1494,1517
    3645 4v9j:AV
    (3.86Å)
    		 18 N/A N/A N/A Thermus
    thermophilus
    HB27
    262724    		 23812722 Assembly1
    rna:AA:5~1538 7~18,20~21
    rna:AW:1~76 16~19
    3646 4v9j:AW
    (3.86Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS0000093D11 RF00005 Escherichia
    coli
    562    		 23812722 Assembly1
    rna:AA:5~1538 29~32,34,41
    rna:AV:4~21 34~37
    rna:BA:6~2897 3~4,19,56,70~72,76
    3647 4v9j:BA
    (3.86Å)
    		 2879 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DEC7 RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    HB27
    262724    		 23812722 Assembly1
    rna:AA:5~1538 1689,1701~1704,1846,1912~1913,
    1915~1916,1919~1920,1948,1959~
    1961,2863
    rna:AW:1~76 1850~1852,1892~1893,2112,2169,
    2394~2395,2421~2422,2432
    rna:BB:1~118 861~863,917~920
    3648 4v9j:BB
    (3.86Å)
    		 119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DE2B RF00001 Thermus
    thermophilus
    HB27
    262724    		 23812722 Assembly1
    rna:BA:6~2897 78~81,96~97,100
    3649 4v9j:CA
    (3.86Å)
    		 1511 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DFCE RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB27
    262724    		 23812722 Assembly2
    rna:CV:4~21 723,926,966,1400,1503,1505~150
    7,1531~1538
    rna:CW:1~76 789,966,1229~1231,1338~1340
    rna:DA:6~2897 702,1407~1409,1418,1429,1440C,
    1474~1475,1483~1484,1494~1495,
    1517
    3650 4v9j:CV
    (3.86Å)
    		 18 N/A N/A N/A Thermus
    thermophilus
    HB27
    262724    		 23812722 Assembly2
    rna:CA:5~1538 7~18,20~21
    rna:CW:1~76 16~19
    3651 4v9j:CW
    (3.86Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS0000093D11 RF00005 Escherichia
    coli
    562    		 23812722 Assembly2
    rna:CA:5~1538 29~32,34,37,40~41
    rna:CV:4~21 34~37
    rna:DA:6~2897 4,19,56,70~72,76
    3652 4v9j:DA
    (3.86Å)
    		 2879 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DEC7 RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    HB27
    262724    		 23812722 Assembly2
    rna:CA:5~1538 1689,1701,1703~1704,1847,1912~
    1913,1916,1919~1920,1959~1961,
    2863
    rna:CW:1~76 1850~1852,1892~1893,2112,2169,
    2394~2395,2421~2422,2432
    rna:DB:1~118 861~863,915,917~919
    3653 4v9j:DB
    (3.86Å)
    		 119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DE2B RF00001 Thermus
    thermophilus
    HB27
    262724    		 23812722 Assembly2
    rna:DA:6~2897 78~81,96~97,100
    3654 4v9k:AA
    (3.5Å)
    		 1511 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DFCE RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB27
    262724    		 23812722 Assembly1
    rna:AW:1~76 966,1229~1230,1338~1341
    rna:AV:4~26 723,926~927,1397~1398,1400~140
    1,1498,1503,1505~1507,1531~153
    3,1535~1538
    rna:BA:6~2897 702,784,899~900,1407~1409,1418
    ,1429,1440C,1473,1475,1483~148
    4,1493~1495,1517
    3655 4v9k:AV
    (3.5Å)
    		 23 N/A N/A N/A Thermus
    thermophilus
    HB27
    262724    		 23812722 Assembly1
    rna:AA:5~1538 7~10,12~15,17~22,25
    rna:AW:1~76 16,18
    3656 4v9k:AW
    (3.5Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS0000093D11 RF00005 Escherichia
    coli
    562    		 23812722 Assembly1
    rna:AA:5~1538 30~32,34,40~41
    rna:AV:4~26 35~37
    rna:BA:6~2897 3~4,19~20,56,70~71,76
    3657 4v9k:BA
    (3.5Å)
    		 2879 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DEC7 RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    HB27
    262724    		 23812722 Assembly1
    rna:AA:5~1538 1689,1702~1703,1832,1837,1846,
    1848,1912~1913,1915~1916,1919~
    1920,1947~1948,1959~1960,2863~
    2864
    rna:AW:1~76 1850~1851,1892~1893,2112,2169,
    2394~2395,2421~2422
    rna:BB:1~118 861~864,915,917~919,958
    3658 4v9k:BB
    (3.5Å)
    		 119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DE2B RF00001 Thermus
    thermophilus
    HB27
    262724    		 23812722 Assembly1
    rna:BA:6~2897 78~81,89B,96~97,99~101
    3659 4v9k:CA
    (3.5Å)
    		 1511 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DFCE RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB27
    262724    		 23812722 Assembly2
    rna:CW:1~76 789,966,1229~1230,1338~1341
    rna:CV:4~26 723,926,1397,1400~1401,1498,15
    03,1505~1507,1531~1538
    rna:DA:6~2897 702,783~784,899,1407~1408,1418
    ,1429,1440C,1473,1475,1483~148
    4,1493~1495,1517
    3660 4v9k:CV
    (3.5Å)
    		 23 N/A N/A N/A Thermus
    thermophilus
    HB27
    262724    		 23812722 Assembly2
    rna:CA:5~1538 7~10,12~15,17~22,24~25
    rna:CW:1~76 16~18
    3661 4v9k:CW
    (3.5Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS0000093D11 RF00005 Escherichia
    coli
    562    		 23812722 Assembly2
    rna:CA:5~1538 30~32,34,37~38,40~41
    rna:CV:4~26 35~37
    rna:DA:6~2897 2,4,19~20,56,70~71,76
    3662 4v9k:DA
    (3.5Å)
    		 2879 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DEC7 RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    HB27
    262724    		 23812722 Assembly2
    rna:CA:5~1538 1689,1702~1703,1836~1837,1846,
    1848,1912~1913,1916,1919~1920,
    1947~1948,1959~1960,2863~2864
    rna:CW:1~76 1850~1852,1892~1893,2112,2169,
    2394~2395,2421~2422,2432
    rna:DB:1~118 861~864,915,917~919
    3663 4v9k:DB
    (3.5Å)
    		 119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DE2B RF00001 Thermus
    thermophilus
    HB27
    262724    		 23812722 Assembly2
    rna:DA:6~2897 78~81,97,100~101
    3664 4v9l:AA
    (3.5Å)
    		 1511 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DFCE RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB27
    262724    		 23812722 Assembly1
    rna:AW:1~76 789,966,1229~1230,1338~1340
    rna:AV:4~26 530,926,1196,1397,1400~1401,14
    98,1503,1505,1507,1531~1533,15
    35~1538
    rna:BA:6~2897 702,899,1407~1409,1418,1429,14
    40C,1473,1475,1483~1485,1494~1
    495,1517
    3665 4v9l:AV
    (3.5Å)
    		 23 N/A N/A N/A Thermus
    thermophilus
    HB27
    262724    		 23812722 Assembly1
    rna:AA:5~1538 7~15,17~19,21~25
    rna:AW:1~76 16~18
    3666 4v9l:AW
    (3.5Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS0000093D11 RF00005 Escherichia
    coli
    562    		 23812722 Assembly1
    rna:AA:5~1538 29~32,34,37~38,40~41
    rna:AV:4~26 35~38
    rna:BA:6~2897 3~4,19~20,56,70~72,76
    3667 4v9l:BA
    (3.5Å)
    		 2879 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DEC7 RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    HB27
    262724    		 23812722 Assembly1
    rna:AA:5~1538 1689,1702~1703,1831,1846,1848,
    1912~1913,1916,1919~1920,1947~
    1948,1959~1961,2863~2864
    rna:AW:1~76 1850~1852,1891~1893,2112,2169,
    2394~2395,2421~2422,2432
    rna:BB:1~118 861~864,915,917~919
    3668 4v9l:BB
    (3.5Å)
    		 119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DE2B RF00001 Thermus
    thermophilus
    HB27
    262724    		 23812722 Assembly1
    rna:BA:6~2897 78~81,97,99~100
    3669 4v9l:CA
    (3.5Å)
    		 1511 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DFCE RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB27
    262724    		 23812722 Assembly2
    rna:CW:1~76 789~790,966,1229,1338~1341
    rna:CV:4~26 530,926~927,1397,1400~1401,149
    8,1503,1505~1507,1531~1533,153
    5~1538
    rna:DA:6~2897 702,784,899,1407~1409,1418,142
    9,1440C,1473,1475,1483~1484,14
    94~1496,1517
    3670 4v9l:CV
    (3.5Å)
    		 23 N/A N/A N/A Thermus
    thermophilus
    HB27
    262724    		 23812722 Assembly2
    rna:CA:5~1538 7~15,17~25
    rna:CW:1~76 16~18
    3671 4v9l:CW
    (3.5Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS0000093D11 RF00005 Escherichia
    coli
    562    		 23812722 Assembly2
    rna:CA:5~1538 29~32,34,37~38,40~41
    rna:CV:4~26 35~38
    rna:DA:6~2897 3~4,19~20,56,70~71,76
    3672 4v9l:DA
    (3.5Å)
    		 2879 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DEC7 RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    HB27
    262724    		 23812722 Assembly2
    rna:CA:5~1538 1689,1702~1704,1831~1832,1837,
    1846,1848,1912~1913,1916,1919~
    1920,1959~1961,2864
    rna:CW:1~76 1850~1851,1892~1893,2112,2169,
    2394~2395,2421~2422,2432
    rna:DB:1~118 861~864,917~919
    3673 4v9l:DB
    (3.5Å)
    		 119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DE2B RF00001 Thermus
    thermophilus
    HB27
    262724    		 23812722 Assembly2
    rna:DA:6~2897 78~81,97,99~100
    3674 4v9m:AA
    (4.0Å)
    		 1511 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DFCE RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB27
    262724    		 23812722 Assembly1
    rna:AW:1~76 789~790,966,1229~1230,1338~134
    0
    rna:AV:4~26 530,926,1196,1397,1400~1401,14
    92~1493,1498,1503,1505~1507,15
    31~1533,1535~1538
    rna:BA:6~2897 702,783,1407~1409,1418,1429,14
    40C,1475,1483~1484,1494~1495,1
    517
    3675 4v9m:AV
    (4.0Å)
    		 23 N/A N/A N/A Thermus
    thermophilus
    HB27
    262724    		 23812722 Assembly1
    rna:AA:5~1538 7~15,17~25
    rna:AW:1~76 16~18
    3676 4v9m:AW
    (4.0Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS0000093D11 RF00005 Escherichia
    coli
    562    		 23812722 Assembly1
    rna:AA:5~1538 29~32,34,37~38,40~41
    rna:AV:4~26 35~38
    rna:BA:6~2897 3~4,19~20,56,70~72,76
    3677 4v9m:BA
    (4.0Å)
    		 2879 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DEC7 RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    HB27
    262724    		 23812722 Assembly1
    rna:AA:5~1538 1689,1703~1704,1836,1846,1848,
    1912~1913,1916,1919~1920,1947~
    1948,1959~1961,2864
    rna:AW:1~76 1850~1852,1892~1893,2112,2169,
    2394~2395,2421~2422,2432
    rna:BB:1~118 861~863,915,917~919,958
    3678 4v9m:BB
    (4.0Å)
    		 119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DE2B RF00001 Thermus
    thermophilus
    HB27
    262724    		 23812722 Assembly1
    rna:BA:6~2897 78~81,89B,97,99~100
    3679 4v9m:CA
    (4.0Å)
    		 1511 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DFCE RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB27
    262724    		 23812722 Assembly2
    rna:CW:1~76 789~790,966,1229,1338~1340
    rna:CV:4~26 530,723,926~927,1196,1397,1400
    ~1401,1493,1498,1503,1505~1507
    ,1531~1533,1535~1538
    rna:DA:6~2897 702,783~784,1407,1409,1418,142
    9~1430,1473,1475,1483~1485,149
    4~1496,1517
    3680 4v9m:CV
    (4.0Å)
    		 23 N/A N/A N/A Thermus
    thermophilus
    HB27
    262724    		 23812722 Assembly2
    rna:CA:5~1538 7~15,17~18,20~25
    rna:CW:1~76 16~18
    3681 4v9m:CW
    (4.0Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS0000093D11 RF00005 Escherichia
    coli
    562    		 23812722 Assembly2
    rna:CA:5~1538 29~32,34,37~38,40~42
    rna:CV:4~26 35~38
    rna:DA:6~2897 19~20,56,70~72,76
    3682 4v9m:DA
    (4.0Å)
    		 2879 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DEC7 RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    HB27
    262724    		 23812722 Assembly2
    rna:CA:5~1538 1689,1702~1704,1836~1837,1846,
    1848,1912~1913,1916,1919~1920,
    1947,1959~1961
    rna:CW:1~76 1850~1852,1892~1893,2112,2169,
    2394~2395,2421~2422,2432
    rna:DB:1~118 861~864,915,917~919
    3683 4v9m:DB
    (4.0Å)
    		 119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DE2B RF00001 Thermus
    thermophilus
    HB27
    262724    		 23812722 Assembly2
    rna:DA:6~2897 78~81,96~100
    3684 4v9n:AA
    (3.4Å)
    		 1504 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E1FC RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB27
    262724    		 23769667 Assembly1
    rna:AV:15~24 530,926,1196,1397,1400~1402,14
    92~1493,1498
    rna:AW:1~76 790,966,1229~1230,1338~1340,14
    00
    rna:BA:6~2897 702,783~784,899,1407~1409,1418
    ,1429,1440C,1473~1475,1483~148
    4,1493~1496,1517
    3685 4v9n:AV
    (3.4Å)
    		 10 N/A N/A N/A Thermus
    thermophilus
    HB27
    262724    		 23769667 Assembly1
    rna:AA:5~1531 15~23
    rna:AW:1~76 16~18
    3686 4v9n:AW
    (3.4Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Thermus
    thermophilus
    HB27
    262724    		 23769667 Assembly1
    rna:AA:5~1531 30~32,34,38~41
    rna:AV:15~24 34~37
    rna:BA:6~2897 2~3,11~13,24~25,74~76
    3687 4v9n:BA
    (3.4Å)
    		 2789 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DD88 RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    HB27
    262724    		 23769667 Assembly1
    rna:AA:5~1531 1689,1700~1704,1832,1836~1837,
    1846,1848,1912~1913,1916,1919~
    1920,1947~1948,1959~1961,2863~
    2864
    rna:AW:1~76 1907~1909,1922~1924,2063~2064,
    2251~2253,2255,2450~2451,2585,
    2601~2602
    rna:BB:1~118 861~864,915,917~919
    3688 4v9n:BB
    (3.4Å)
    		 119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DE2B RF00001 Thermus
    thermophilus
    HB27
    262724    		 23769667 Assembly1
    rna:BA:6~2897 78~81,96~97,99~100
    3689 4v9n:CA
    (3.4Å)
    		 1504 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E1FC RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB27
    262724    		 23769667 Assembly2
    rna:CV:15~24 530,926,1196,1397,1400~1402,14
    92~1493,1498
    rna:CW:1~76 790,966,1229~1230,1338~1340,14
    00
    rna:DA:6~2897 702,784,899,1407~1409,1418,142
    9,1440C,1473~1475,1483~1484,14
    93~1496,1517
    3690 4v9n:CV
    (3.4Å)
    		 10 N/A N/A N/A Thermus
    thermophilus
    HB27
    262724    		 23769667 Assembly2
    rna:CA:5~1531 15~23
    rna:CW:1~76 16~18
    3691 4v9n:CW
    (3.4Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Thermus
    thermophilus
    HB27
    262724    		 23769667 Assembly2
    rna:CA:5~1531 30~32,34,38~41
    rna:CV:15~24 34~37
    rna:DA:6~2897 2~3,11~13,24~25,74~76
    3692 4v9n:DA
    (3.4Å)
    		 2789 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DD88 RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    HB27
    262724    		 23769667 Assembly2
    rna:CA:5~1531 1689,1700~1704,1832,1836~1837,
    1846,1848,1912~1913,1915~1916,
    1919~1920,1947~1948,1959~1961,
    2863~2864
    rna:CW:1~76 1907~1909,1922~1924,2063~2064,
    2251~2253,2255,2450~2451,2585,
    2601~2602
    rna:DB:1~118 861~864,915,917~919
    3693 4v9n:DB
    (3.4Å)
    		 119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DE2B RF00001 Thermus
    thermophilus
    HB27
    262724    		 23769667 Assembly2
    rna:DA:6~2897 78~81,96~97,99~100
    3694 4v9o:AA
    (2.9Å)
    		 2854 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B0F34 RF02540
    RF02541    		 Escherichia
    coli
    K-12
    83333    		 23812721 Assembly1
    rna:AB:2~119 861~863,915~919,958
    rna:BA:2~1534 1689,1700~1704,1832,1837,1846,
    1848,1912~1913,1915~1916,1919~
    1920,1947~1948,1950,1959~1961
    3695 4v9o:AB
    (2.9Å)
    		 118 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000049E57 RF00001 Escherichia
    coli
    K-12
    83333    		 23812721 Assembly1
    rna:AA:1~2903 78~81,89~90,96~97,99~100
    3696 4v9o:BA
    (2.9Å)
    		 1533 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00000ABFE9 RF00177
    RF01959
    RF01960    		 Escherichia
    coli
    K-12
    83333    		 23812721 Assembly1
    rna:AA:1~2903 702,784,899,1407~1409,1418,142
    0,1428~1429,1473~1475,1483~148
    4,1493~1496,1517
    3697 4v9o:CA
    (2.9Å)
    		 2854 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B0F34 RF02540
    RF02541    		 Escherichia
    coli
    K-12
    83333    		 23812721 Assembly2
    rna:CB:2~119 861~864,915~919,958
    rna:DA:2~1534 1700~1704,1836~1837,1846,1848,
    1912~1916,1919~1920,1947~1948,
    1959~1961
    3698 4v9o:CB
    (2.9Å)
    		 118 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000049E57 RF00001 Escherichia
    coli
    K-12
    83333    		 23812721 Assembly2
    rna:CA:1~2903 78~81,89~90,96~97,99~100
    3699 4v9o:DA
    (2.9Å)
    		 1533 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00000ABFE9 RF00177
    RF01959
    RF01960    		 Escherichia
    coli
    K-12
    83333    		 23812721 Assembly2
    rna:CA:1~2903 702,783~784,1407~1409,1418,142
    8~1429,1473~1475,1483~1484,149
    3~1496,1517
    3700 4v9o:EA
    (2.9Å)
    		 2854 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B0F34 RF02540
    RF02541    		 Escherichia
    coli
    K-12
    83333    		 23812721 Assembly3
    rna:EB:2~119 861~864,915,917~919,958
    rna:FA:2~1534 1689,1700~1704,1837,1846,1848,
    1912~1916,1919~1920,1947~1948,
    1959~1961
    << < 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 > >>
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    Reference:
  • Chengxin Zhang, Lydia Freddolino (2024) "FURNA: a database for function annotations of RNA structures," PLOS Biology 22(7): e3002476.