SEQ2FUN

FURNA
Download all results in tab-seperated text for 14210 RNAs.
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  • Hover over Ligand to view the name of the ligand and the ligand-binding nucleotides on the RNA.

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    # PDB
    (Resolution)    		 Length EC number
    & GO term     		RNAcentral Rfam Taxon PubMed ATtRACT
    motif     		Ligand &
    binding nucleotides
    3701 4v9o:EB
    (2.9Å)
    		 118 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000049E57 RF00001 Escherichia
    coli
    K-12
    83333    		 23812721 Assembly3
    rna:EA:1~2903 41,78~81,89~90,96~97,99~100
    3702 4v9o:FA
    (2.9Å)
    		 1533 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00000ABFE9 RF00177
    RF01959
    RF01960    		 Escherichia
    coli
    K-12
    83333    		 23812721 Assembly3
    rna:EA:1~2903 702,784,1407~1409,1418,1429,14
    73~1475,1483~1484,1494~1496,15
    17
    3703 4v9o:GA
    (2.9Å)
    		 2854 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B0F34 RF02540
    RF02541    		 Escherichia
    coli
    K-12
    83333    		 23812721 Assembly4
    rna:GB:2~119 861~864,915,917~919,958
    rna:HA:2~1534 1689,1700~1704,1847,1912~1913,
    1916,1919~1920,1947~1948,1950,
    1959~1961
    3704 4v9o:GB
    (2.9Å)
    		 118 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000049E57 RF00001 Escherichia
    coli
    K-12
    83333    		 23812721 Assembly4
    rna:GA:1~2903 78~80,89,96~97,99~101
    3705 4v9o:HA
    (2.9Å)
    		 1533 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00000ABFE9 RF00177
    RF01959
    RF01960    		 Escherichia
    coli
    K-12
    83333    		 23812721 Assembly4
    rna:GA:1~2903 702,1408~1409,1418,1420,1428~1
    429,1473~1475,1483~1485,1493~1
    495,1517
    3706 4v9p:AA
    (2.9Å)
    		 2854 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B0F34 RF02540
    RF02541    		 Escherichia
    coli
    K-12
    83333    		 23812721 Assembly1
    rna:AB:2~119 861~863,915,917~919,958
    rna:BA:2~1534 1700~1704,1848,1912~1913,1915~
    1916,1919~1920,1947~1948,1959~
    1961
    3707 4v9p:AB
    (2.9Å)
    		 118 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000049E57 RF00001 Escherichia
    coli
    K-12
    83333    		 23812721 Assembly1
    rna:AA:1~2903 78~81,89~90,96~97,99~100
    3708 4v9p:BA
    (2.9Å)
    		 1533 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00000ABFE9 RF00177
    RF01959
    RF01960    		 Escherichia
    coli
    K-12
    83333    		 23812721 Assembly1
    rna:AA:1~2903 702,1407~1409,1418,1428~1429,1
    473~1474,1483~1484,1493~1496,1
    517
    3709 4v9p:CA
    (2.9Å)
    		 2854 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B0F34 RF02540
    RF02541    		 Escherichia
    coli
    K-12
    83333    		 23812721 Assembly2
    rna:CB:2~119 861~863,915,917~919,958
    rna:DA:2~1534 1700~1704,1832,1836~1837,1846,
    1848,1912~1913,1915~1916,1919~
    1920,1947~1948,1959~1961
    3710 4v9p:CB
    (2.9Å)
    		 118 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000049E57 RF00001 Escherichia
    coli
    K-12
    83333    		 23812721 Assembly2
    rna:CA:1~2903 78~81,89~90,96~97,99~100
    3711 4v9p:DA
    (2.9Å)
    		 1533 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00000ABFE9 RF00177
    RF01959
    RF01960    		 Escherichia
    coli
    K-12
    83333    		 23812721 Assembly2
    rna:CA:1~2903 702,783~784,899,1407~1409,1418
    ,1429,1473~1475,1483~1484,1493
    ~1496,1517
    3712 4v9p:EA
    (2.9Å)
    		 2854 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B0F34 RF02540
    RF02541    		 Escherichia
    coli
    K-12
    83333    		 23812721 Assembly3
    rna:EB:2~119 861~863,915,917~919,958,2339
    rna:FA:2~1534 1700~1704,1832,1836~1837,1846,
    1848,1912~1916,1919~1920,1947~
    1948,1959~1961
    3713 4v9p:EB
    (2.9Å)
    		 118 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000049E57 RF00001 Escherichia
    coli
    K-12
    83333    		 23812721 Assembly3
    rna:EA:1~2903 41,78~81,89,96~97,99~100
    3714 4v9p:FA
    (2.9Å)
    		 1533 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00000ABFE9 RF00177
    RF01959
    RF01960    		 Escherichia
    coli
    K-12
    83333    		 23812721 Assembly3
    rna:EA:1~2903 702,783~784,899,1407~1409,1418
    ,1428~1430,1473~1475,1483~1484
    ,1494~1496,1517
    3715 4v9p:GA
    (2.9Å)
    		 2854 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B0F34 RF02540
    RF02541    		 Escherichia
    coli
    K-12
    83333    		 23812721 Assembly4
    rna:GB:2~119 861~863,915,917~919,958
    rna:HA:2~1534 1689,1700~1701,1703~1704,1847,
    1912~1913,1915~1916,1919~1920,
    1947~1948,1959~1961
    3716 4v9p:GB
    (2.9Å)
    		 118 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000049E57 RF00001 Escherichia
    coli
    K-12
    83333    		 23812721 Assembly4
    rna:GA:1~2903 78~81,89~90,96~97,99~100
    3717 4v9p:HA
    (2.9Å)
    		 1533 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00000ABFE9 RF00177
    RF01959
    RF01960    		 Escherichia
    coli
    K-12
    83333    		 23812721 Assembly4
    rna:GA:1~2903 702,1407~1409,1418,1428~1429,1
    474~1475,1483~1485,1493~1496,1
    517
    3718 4v9q:AA
    (3.4Å)
    		 2832 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DD88 RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    HB27
    262724    		 23824292 Assembly1
    rna:AB:1~118 861~864,915~919
    rna:BA:5~1531 1689,1700~1704,1832,1836~1837,
    1848,1912~1916,1919~1920,1947~
    1948,1959~1960,2863~2864
    rna:BV:1~76 1907~1909,1922~1924,2251~2253,
    2450~2451,2494,2585,2602
    rna:BW:1~76 1851~1852,2112,2169,2394~2395,
    2421~2422
    3719 4v9q:AB
    (3.4Å)
    		 119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DE2B RF00001 Thermus
    thermophilus
    HB27
    262724    		 23824292 Assembly1
    rna:AA:6~2897 78~81,96,99~101
    3720 4v9q:BA
    (3.4Å)
    		 1504 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E1FC RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB27
    262724    		 23824292 Assembly1
    rna:AA:6~2897 702,784,899,1407~1409,1418,142
    9,1443,1473~1475,1483~1484,149
    3~1496,1517
    rna:BV:1~76 790,966,1229~1230,1338~1340,14
    00
    rna:BX:14~18 693,926,1400~1401,1498,1505
    3721 4v9q:BV
    (3.4Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Alcaligenes
    sp.
    512    		 23824292 Assembly1
    rna:AA:6~2897 11~13,24~25,74~76
    rna:BA:5~1531 29~32,34,38~41
    rna:BX:14~18 34~37
    3722 4v9q:BW
    (3.4Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Alcaligenes
    sp.
    512    		 23824292 Assembly1
    rna:AA:6~2897 56,71~72,76
    3723 4v9q:CA
    (3.4Å)
    		 2832 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DD88 RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    HB27
    262724    		 23824292 Assembly2
    rna:CB:1~118 861~864,915~919
    rna:DA:5~1531 1700,1702~1703,1832,1836~1837,
    1846,1848,1912~1916,1919~1920,
    1947~1948,1959~1961,2863~2864
    rna:DV:1~76 1907~1909,1922~1924,2251~2253,
    2450~2451,2494,2585,2602
    rna:DW:1~76 1851~1852,2112,2169,2394~2395,
    2421~2422
    3724 4v9q:CB
    (3.4Å)
    		 119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DE2B RF00001 Thermus
    thermophilus
    HB27
    262724    		 23824292 Assembly2
    rna:CA:6~2897 78~81,96,99~101
    3725 4v9q:DA
    (3.4Å)
    		 1504 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E1FC RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB27
    262724    		 23824292 Assembly2
    rna:CA:6~2897 702,784,899,1407~1409,1418,142
    9,1443,1473~1474,1483~1484,149
    2~1496,1517
    rna:DV:1~76 790,966,1229~1230,1338~1340,14
    00
    rna:DX:14~18 693,926,1400~1401,1498,1505
    3726 4v9q:DV
    (3.4Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Alcaligenes
    sp.
    512    		 23824292 Assembly2
    rna:CA:6~2897 11~13,24~25,74~76
    rna:DA:5~1531 30~32,34,38~41
    rna:DX:14~18 34~37
    3727 4v9q:DW
    (3.4Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Alcaligenes
    sp.
    512    		 23824292 Assembly2
    rna:CA:6~2897 19,56,71~72,76
    3728 4v9r:AA
    (3.0Å)
    		 1498 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E226 RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    274    		 24412368 Assembly1
    rna:AV:13~19 926,1400~1401,1498,1505~1506
    rna:AX:2~76 790,966,1229~1230,1338~1340,14
    00
    rna:BA:6~2906 702,784,899~900,1407~1409,1418
    ,1429,1442A,1473~1475,1483~148
    4,1492,1494~1496,1517
    3729 4v9r:AX
    (3.0Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    562    		 24412368 Assembly1
    rna:AA:4~1532 29~32,34,38~41
    rna:AV:13~19 34~37
    rna:BA:6~2906 2~3,11~13,24~25,74~76
    3730 4v9r:BA
    (3.0Å)
    		 2731 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001698E8 RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    274    		 24412368 Assembly1
    rna:AA:4~1532 1736,1748~1751,1863,1868,1877,
    1879,1934~1935,1937~1938,1941~
    1942,1969~1970,1981~1983,2873~
    2874
    rna:AX:2~76 1929~1931,1944~1946,2086,2263~
    2265,2267,2451,2462~2463,2518,
    2614
    rna:BB:1~120 908~911,961,963~965,1003
    3731 4v9r:BB
    (3.0Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00005F2F4B RF00001 Thermus
    thermophilus
    274    		 24412368 Assembly1
    rna:BA:6~2906 78~81,90,97~98,100~102
    3732 4v9r:CA
    (3.0Å)
    		 1503 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E226 RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    274    		 24412368 Assembly2
    rna:CV:14~19 926,1400~1402,1498,1505~1506
    rna:CX:2~76 790,966,1229~1230,1338~1340,14
    00
    rna:DA:6~2897 702,783~784,899,1407~1409,1418
    ,1420,1429,1442A,1473~1475,148
    3~1484,1492~1496,1517
    3733 4v9r:CX
    (3.0Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    562    		 24412368 Assembly2
    rna:CA:4~1532 30~32,34,38~41
    rna:CV:14~19 34~37
    rna:DA:6~2897 2~3,11~13,24~25,74~76
    3734 4v9r:DA
    (3.0Å)
    		 2714 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001698E8 RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    274    		 24412368 Assembly2
    rna:CA:4~1532 1689,1700~1704,1832,1836~1837,
    1846,1848,1912~1916,1919~1920,
    1947~1950,1959~1961,2863~2864
    rna:CX:2~76 1907~1909,1922~1924,2251~2253,
    2255,2450~2451,2601~2602
    rna:DB:1~120 861~864,915~919,958
    3735 4v9r:DB
    (3.0Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00005F2F4B RF00001 Thermus
    thermophilus
    274    		 24412368 Assembly2
    rna:DA:6~2897 78~81,90,97~102
    3736 4v9s:AA
    (3.1Å)
    		 1498 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E226 RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 24412368 Assembly1
    rna:AV:13~19 926,1400~1401,1498,1506
    rna:AX:2~76 790,966,1229~1230,1338~1341,14
    00
    rna:BA:6~2906 702,784,899,1407~1409,1418,142
    9,1442A,1473~1475,1483~1485,14
    92,1494~1496,1517
    3737 4v9s:AX
    (3.1Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    562    		 24412368 Assembly1
    rna:AA:4~1532 30~32,34,38~41
    rna:AV:13~19 34~37
    rna:BA:6~2906 2~3,11~13,24~25,74~76
    3738 4v9s:BA
    (3.1Å)
    		 2731 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001698E8 RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    HB8
    300852    		 24412368 Assembly1
    rna:AA:4~1532 1736,1747~1751,1863,1868,1877,
    1879,1934~1935,1937~1938,1941~
    1942,1969~1970,1981~1983,2873~
    2874
    rna:AX:2~76 1929~1931,1944~1946,2263~2265,
    2267,2462~2463,2518,2614
    rna:BB:1~120 908~911,963~965,1003
    3739 4v9s:BB
    (3.1Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00005F2F4B RF00001 Thermus
    thermophilus
    HB8
    300852    		 24412368 Assembly1
    rna:BA:6~2906 78~81,90,97~98,100~102
    3740 4v9s:CA
    (3.1Å)
    		 1503 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E226 RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 24412368 Assembly2
    rna:CV:14~19 926,1400~1402,1498,1505
    rna:CX:2~76 790,966,1229~1230,1338~1340,14
    00
    rna:DA:6~2897 702,784,899,1407~1409,1418,142
    9~1430,1442A,1473~1475,1483~14
    85,1492~1496,1517
    3741 4v9s:CX
    (3.1Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    562    		 24412368 Assembly2
    rna:CA:4~1532 30~32,34,38~41
    rna:CV:14~19 34~37
    rna:DA:6~2897 2~3,11~13,24~25,74~76
    3742 4v9s:DA
    (3.1Å)
    		 2714 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001698E8 RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    HB8
    300852    		 24412368 Assembly2
    rna:CA:4~1532 1689,1700~1704,1832,1836~1837,
    1846,1848,1912~1916,1919~1920,
    1947~1949,1959~1961,2863~2864
    rna:CX:2~76 1907~1909,1922~1924,2251~2253,
    2255,2450~2451,2601~2602
    rna:DB:1~120 861~864,915,917~919,958
    3743 4v9s:DB
    (3.1Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00005F2F4B RF00001 Thermus
    thermophilus
    HB8
    300852    		 24412368 Assembly2
    rna:DA:6~2897 78~81,90,97~98,100~102
    3744 4w29:AA
    (3.8Å)
    		 1511 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DFCE RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB27
    262724    		 25190797 Assembly1
    rna:AW:1~76 966,1229,1338~1341
    rna:AV:1~36 530,723,926,966,1397~1398,1400
    ~1401,1403,1493,1498,1503,1505
    ~1506,1531~1538
    rna:AX:1~77 954,965~966,1054,1196~1197,140
    0
    rna:BA:6~2897 702,784,1407~1409,1418,1428~14
    29,1474~1475,1483~1484,1493~14
    96,1517
    3745 4w29:AV
    (3.8Å)
    		 36 N/A N/A N/A Escherichia
    coli
    str.
    K-12
    substr.
    MG1655
    511145    		 25190797 Assembly1
    rna:AA:5~1538 6~9,11~18,20~22,24~25
    rna:AW:1~76 16~18
    rna:AX:1~77 19~21
    3746 4w29:AW
    (3.8Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS0000093D11 RF00005 Escherichia
    coli
    562    		 25190797 Assembly1
    rna:AA:5~1538 29~32,34,40~41
    rna:AV:1~36 34~37
    rna:BA:6~2897 4,19,56,70~72,76
    3747 4w29:AX
    (3.8Å)
    		 78 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080E345 RF00005 Escherichia
    coli
    562    		 25190797 Assembly1
    rna:AA:5~1538 30~34
    rna:AV:1~36 35~36
    rna:BA:6~2897 12~13,72,74~76
    3748 4w29:BA
    (3.8Å)
    		 2879 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DEC7 RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    HB27
    262724    		 25190797 Assembly1
    rna:AA:5~1538 1686,1689,1701,1703~1704,1837,
    1846,1848,1895,1912~1913,1916,
    1919~1920,1947,1959~1961
    rna:AW:1~76 1850~1852,1892~1893,2112,2169,
    2394~2395,2421~2422,2432
    rna:AX:1~77 1908~1909,2252~2253,2451~2452,
    2553~2555,2602
    rna:BB:1~118 861~864,915~918,920,958,1028
    3749 4w29:BB
    (3.8Å)
    		 119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DE2B RF00001 Thermus
    thermophilus
    HB27
    262724    		 25190797 Assembly1
    rna:BA:6~2897 78~81,88,89B,96~97,99~100
    3750 4w29:CA
    (3.8Å)
    		 1511 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DFCE RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB27
    262724    		 25190797 Assembly2
    rna:CV:1~36 723,856,926,1397~1398,1400~140
    1,1503,1505~1506,1531~1538
    rna:CW:1~76 966,1229,1338~1340
    rna:CX:1~77 954,966,1054,1400
    rna:DA:6~2897 702,784,1407~1408,1418,1429,14
    75,1483~1485,1493~1496,1517
    3751 4w29:CV
    (3.8Å)
    		 36 N/A N/A N/A Escherichia
    coli
    str.
    K-12
    substr.
    MG1655
    511145    		 25190797 Assembly2
    rna:CA:5~1538 6~15,17~18,20~21,24~25
    rna:CW:1~76 16~18
    rna:CX:1~77 19~21
    3752 4w29:CW
    (3.8Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS0000093D11 RF00005 Escherichia
    coli
    562    		 25190797 Assembly2
    rna:CA:5~1538 29,31~32,34,40~41
    rna:CV:1~36 34~37
    rna:DA:6~2897 4~5,19,56,70~72,76
    3753 4w29:CX
    (3.8Å)
    		 78 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080E345 RF00005 Escherichia
    coli
    562    		 25190797 Assembly2
    rna:CA:5~1538 30,33~34
    rna:CV:1~36 34~37
    rna:DA:6~2897 12~13,24~25,72~77
    3754 4w29:DA
    (3.8Å)
    		 2879 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DEC7 RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    HB27
    262724    		 25190797 Assembly2
    rna:CA:5~1538 1689,1703~1704,1836~1837,1846,
    1848,1912~1913,1919~1920,1959~
    1961
    rna:CW:1~76 1850~1852,1891~1893,2112,2169,
    2395,2421~2422,2432
    rna:CX:1~77 1908~1910,2252~2253,2451~2452,
    2506~2507,2553~2555,2573,2585
    rna:DB:1~118 861~864,917~920,1028
    3755 4w29:DB
    (3.8Å)
    		 119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DE2B RF00001 Thermus
    thermophilus
    HB27
    262724    		 25190797 Assembly2
    rna:DA:6~2897 78~81,88,96~98,100
    3756 4w2e:A
    (2.9Å)
    		 2873 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001698E8 RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    274    		 25104389 Assembly1
    rna:B:1~120 861~864,915~919,958
    rna:x:1~76 1851~1852,2112,2169,2394~2395,
    2422,2432
    rna:a:4~1531 1701,1703~1704,1832,1836~1837,
    1846,1848,1895,1912~1913,1915~
    1916,1919~1920,1947~1948,1959~
    1961,2863~2864
    rna:w:1~76 1907~1909,1922~1924,2251~2253,
    2255,2450~2451,2602
    3757 4w2e:B
    (2.9Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00005F2F4B RF00001 Thermus
    thermophilus
    274    		 25104389 Assembly1
    rna:A:6~2897 78~81,90,97~98,100~102
    3758 4w2e:a
    (2.9Å)
    		 1496 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DFED RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    274    		 25104389 Assembly1
    rna:A:6~2897 702,783~784,899,1407~1409,1418
    ,1429,1442A,1474,1483~1484,149
    4~1496,1517
    rna:w:1~76 790,966,1229~1230,1338~1340,14
    00
    rna:v:12~18 926,1400~1401,1498,1503~1505
    3759 4w2e:w
    (2.9Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    562    		 25104389 Assembly1
    rna:A:6~2897 2~3,11~13,24~25,74~76
    rna:a:4~1531 30~32,34,38,40~41
    rna:v:12~18 34~37
    3760 4w2e:x
    (2.9Å)
    		 74 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    562    		 25104389 Assembly1
    rna:A:6~2897 19,56,71~72,76
    3761 4w2f:AA
    (2.4Å)
    		 1497 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DFED RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 25306919 Assembly1
    rna:AV:12~24 530,926~927,1196,1397,1400~140
    1,1492~1493,1498,1503~1505,150
    7
    rna:AW:1~76 530~531,1054,1493
    rna:AX:2~76 790,966,1229~1230,1338~1340,14
    00
    rna:BA:6~2906 702,783~784,899~900,1407~1409,
    1418,1429,1442A,1473~1475,1483
    ~1484,1494~1496,1517
    3762 4w2f:AV
    (2.4Å)
    		 13 N/A N/A N/A synthetic
    construct
    32630    		 25306919 Assembly1
    rna:AA:4~1532 12~13,15~24
    rna:AW:1~76 19~21
    rna:AX:2~76 16~18
    3763 4w2f:AW
    (2.4Å)
    		 74 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    562    		 25306919 Assembly1
    rna:AA:4~1532 34~37
    rna:AV:12~24 34~37
    rna:BA:6~2906 19,37~38,55~56,64,74~76
    3764 4w2f:AX
    (2.4Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    562    		 25306919 Assembly1
    rna:AA:4~1532 29~32,34,38,40~41
    rna:AV:12~24 34~37
    rna:AY:1~76 39~40
    rna:BA:6~2906 11~13,24~25,74~76
    3765 4w2f:AY
    (2.4Å)
    		 74 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    562    		 25306919 Assembly1
    rna:BA:6~2906 19,56,72,76
    3766 4w2f:BA
    (2.4Å)
    		 2871 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001698E8 RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    HB8
    300852    		 25306919 Assembly1
    rna:AA:4~1532 1736,1747~1751,1863,1867~1868,
    1877,1879,1934~1938,1941~1942,
    1969~1971,1981~1983,2873~2874
    rna:AW:1~76 928~929,942~943,1935,2494~2495
    ,2518~2519,2565~2567,2595~2597
    ,2614
    rna:AX:2~76 1929~1931,1944~1946,2263~2265,
    2451,2462~2463,2613~2614
    rna:AY:1~76 1882,2134,2191,2406~2407,2433~
    2434
    rna:BB:1~120 908~911,961,963~965,1003
    3767 4w2f:BB
    (2.4Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DEE8 RF00001 Thermus
    thermophilus
    HB8
    300852    		 25306919 Assembly1
    rna:BA:6~2906 78~81,90,97~98,100~102
    3768 4w2f:CA
    (2.4Å)
    		 1503 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DFED RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 25306919 Assembly2
    rna:CV:12~24 926,1196,1397,1400~1401,1492~1
    493,1498,1503~1505,1507
    rna:CW:2~76 530,1054,1493
    rna:CX:2~76 790,966,1229~1230,1338~1340,14
    00
    rna:DA:6~2897 702,783~784,899~900,1407~1409,
    1418,1429,1442A,1473~1475,1483
    ~1484,1494~1496,1517
    3769 4w2f:CV
    (2.4Å)
    		 13 N/A N/A N/A synthetic
    construct
    32630    		 25306919 Assembly2
    rna:CA:4~1532 12~13,15~20,22~24
    rna:CW:2~76 19~21
    rna:CX:2~76 16~18
    3770 4w2f:CW
    (2.4Å)
    		 72 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    562    		 25306919 Assembly2
    rna:CA:4~1532 34~37
    rna:CV:12~24 34~37
    rna:DA:6~2897 19,37~38,55~56,64,74~76
    3771 4w2f:CX
    (2.4Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    562    		 25306919 Assembly2
    rna:CA:4~1532 30~32,34,38~41
    rna:CV:12~24 34~37
    rna:CY:1~76 39~40
    rna:DA:6~2897 12~13,24~25,74~76
    3772 4w2f:CY
    (2.4Å)
    		 73 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    562    		 25306919 Assembly2
    rna:DA:6~2897 19,56,71~72,76
    3773 4w2f:DA
    (2.4Å)
    		 2800 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001698E8 RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    HB8
    300852    		 25306919 Assembly2
    rna:CA:4~1532 1689,1700~1704,1832,1836~1837,
    1846,1848,1912~1916,1919~1920,
    1947~1949,1959~1961,2864
    rna:CW:2~76 882,897,1913,2482~2483,2506~25
    07,2553~2555,2583~2585
    rna:CX:2~76 1907~1909,1922~1924,2251~2253,
    2439,2450~2451,2601~2602
    rna:CY:1~76 1851,2112,2169,2394~2395,2421~
    2422
    rna:DB:1~120 861~863,915,917~919,958
    3774 4w2f:DB
    (2.4Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DEE8 RF00001 Thermus
    thermophilus
    HB8
    300852    		 25306919 Assembly2
    rna:DA:6~2897 78~81,90,97~98,100~101
    3775 4w2g:AA
    (2.55Å)
    		 1498 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DFED RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 25306919 Assembly1
    rna:AV:12~24 530,926,1196,1397,1400~1401,14
    92~1493,1498,1503,1505
    rna:AW:1~76 530~531,1054,1493
    rna:AX:2~76 790,966,1229~1230,1338~1340,14
    00
    rna:BA:6~2906 702,783~784,899~900,1407~1409,
    1418,1429,1442A,1473~1475,1483
    ~1484,1494~1496,1517
    3776 4w2g:AV
    (2.55Å)
    		 13 N/A N/A N/A synthetic
    construct
    32630    		 25306919 Assembly1
    rna:AA:4~1532 12~13,15~24
    rna:AW:1~76 19~21
    rna:AX:2~76 16~18
    3777 4w2g:AW
    (2.55Å)
    		 74 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    562    		 25306919 Assembly1
    rna:AA:4~1532 34~37
    rna:AV:12~24 34~37
    rna:BA:6~2906 19,37~38,55~56,64,74~76
    3778 4w2g:AX
    (2.55Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    562    		 25306919 Assembly1
    rna:AA:4~1532 29~32,34,38,40~41
    rna:AV:12~24 34~37
    rna:BA:6~2906 11~13,24~25,74~76
    3779 4w2g:AY
    (2.55Å)
    		 74 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    562    		 25306919 Assembly1
    rna:BA:6~2906 3,19,56,71~72,76
    3780 4w2g:BA
    (2.55Å)
    		 2819 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001698E8 RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    HB8
    300852    		 25306919 Assembly1
    rna:AA:4~1532 1736,1747~1751,1863,1867~1868,
    1877,1879,1934~1938,1941~1942,
    1969~1971,1981~1983,2873~2874
    rna:AW:1~76 928~929,942~944,1935,2495,2518
    ~2519,2565~2567,2595~2597,2614
    rna:AX:2~76 1929~1931,1944~1946,2263~2265,
    2462~2463,2613~2614
    rna:AY:1~76 1882~1883,1907,2134,2191,2406~
    2407,2433~2434,2444
    rna:BB:1~120 908~911,961,963~965,1003
    3781 4w2g:BB
    (2.55Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DEE8 RF00001 Thermus
    thermophilus
    HB8
    300852    		 25306919 Assembly1
    rna:BA:6~2906 78~81,90,97~98,100~102
    3782 4w2g:CA
    (2.55Å)
    		 1503 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DFED RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 25306919 Assembly2
    rna:CV:12~24 926,1196,1397,1400~1401,1492~1
    493,1498,1503,1505,1507
    rna:CW:2~76 530~531,1054,1493
    rna:CX:2~76 790,966,1229~1230,1338~1340,14
    00
    rna:DA:6~2897 702,783~784,899~900,1407~1409,
    1418,1429~1430,1442A,1473~1475
    ,1483~1484,1493~1496,1517
    3783 4w2g:CV
    (2.55Å)
    		 13 N/A N/A N/A synthetic
    construct
    32630    		 25306919 Assembly2
    rna:CA:4~1532 12~13,15~20,22~24
    rna:CW:2~76 19~21
    rna:CX:2~76 16~18
    3784 4w2g:CW
    (2.55Å)
    		 72 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    562    		 25306919 Assembly2
    rna:CA:4~1532 34~37
    rna:CV:12~24 34~37
    rna:DA:6~2897 19,37~38,56,64,74~76
    3785 4w2g:CX
    (2.55Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    562    		 25306919 Assembly2
    rna:CA:4~1532 29~31,34,38~41
    rna:CV:12~24 34~37
    rna:DA:6~2897 11~13,24~25,74~76
    3786 4w2g:CY
    (2.55Å)
    		 73 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    562    		 25306919 Assembly2
    rna:DA:6~2897 19,56,71~72,76
    3787 4w2g:DA
    (2.55Å)
    		 2800 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001698E8 RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    HB8
    300852    		 25306919 Assembly2
    rna:CA:4~1532 1700~1704,1832,1836~1837,1846,
    1848,1912~1916,1919~1920,1947~
    1949,1959~1961,2863~2864
    rna:CW:2~76 881~882,896~897,1913,2482~2483
    ,2506~2507,2553,2555,2583~2585
    ,2602
    rna:CX:2~76 1907~1909,1922~1924,2251~2253,
    2450~2451,2585,2602
    rna:CY:1~76 1851~1852,2112,2169,2394~2395,
    2421~2422,2432
    rna:DB:1~120 861~863,915~919,958
    3788 4w2g:DB
    (2.55Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DEE8 RF00001 Thermus
    thermophilus
    HB8
    300852    		 25306919 Assembly2
    rna:DA:6~2897 78~81,90,97~98,100~101
    3789 4w2h:AA
    (2.7Å)
    		 1497 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DFED RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 25306919 Assembly1
    rna:AV:14~21 530,926,1400~1401,1492~1493,14
    98
    rna:AX:2~76 790,966,1229~1230,1338~1341,14
    00
    rna:BA:6~2906 702,783~784,899,1407~1409,1418
    ,1429,1442A,1473~1475,1483~148
    4,1493~1496,1517
    3790 4w2h:AX
    (2.7Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    562    		 25306919 Assembly1
    rna:AA:4~1532 30~32,34,38,40~41
    rna:AV:14~21 34~37
    rna:BA:6~2906 2~3,11~13,24~25,74~76
    3791 4w2h:AY
    (2.7Å)
    		 18 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    562    		 25306919 Assembly1
    rna:BA:6~2906 3,71,76
    3792 4w2h:BA
    (2.7Å)
    		 2822 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001698E8 RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    HB8
    300852    		 25306919 Assembly1
    rna:AA:4~1532 1736,1747~1751,1863,1867~1868,
    1877,1879,1934~1938,1941~1942,
    1969~1971,1981~1983,2873~2874
    rna:AX:2~76 1929~1931,1944~1946,2263~2265,
    2267,2462~2463,2613~2614
    rna:AY:1~76 1882~1883,1907,2406~2407,2433~
    2434,2444
    rna:BB:1~120 908~911,961,963~965,1003
    3793 4w2h:BB
    (2.7Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DEE8 RF00001 Thermus
    thermophilus
    HB8
    300852    		 25306919 Assembly1
    rna:BA:6~2906 78~81,90,97~98,100~102
    3794 4w2h:CA
    (2.7Å)
    		 1503 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DFED RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 25306919 Assembly2
    rna:CV:14~18 926,1400~1403,1498
    rna:CX:2~76 790,966,1229~1230,1338~1340,14
    00
    rna:DA:6~2897 702,783~784,899,1407~1409,1418
    ,1429~1430,1442A,1473~1475,148
    3~1484,1493~1496,1517
    3795 4w2h:CX
    (2.7Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    562    		 25306919 Assembly2
    rna:CA:4~1532 30~32,34,38~41
    rna:CV:14~18 34~37
    rna:DA:6~2897 2~3,11~13,24~25,74~76
    3796 4w2h:DA
    (2.7Å)
    		 2800 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001698E8 RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    HB8
    300852    		 25306919 Assembly2
    rna:CA:4~1532 1689,1700~1704,1832,1836~1837,
    1846,1848,1912~1916,1919~1920,
    1947~1949,1959~1961,2863
    rna:CX:2~76 1907~1909,1922~1924,2251~2253,
    2255,2439,2450~2451,2585,2601~
    2602
    rna:CY:72~76 1851~1852,2394~2395,2421~2422
    rna:DB:1~120 861~864,915,917~919,958
    3797 4w2h:DB
    (2.7Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DEE8 RF00001 Thermus
    thermophilus
    HB8
    300852    		 25306919 Assembly2
    rna:DA:6~2897 78~81,90,97~98,100~102
    3798 4w2i:AA
    (2.7Å)
    		 1496 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DFED RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 25306922 Assembly1
    rna:AV:12~24 530,926,1196,1397,1400~1401,14
    92~1493,1498,1503,1505,1507
    rna:AW:1~76 530~531,1054,1493
    rna:AX:2~76 790,966,1229~1230,1338~1340,14
    00
    rna:BA:6~2906 702,783~784,899~900,1407~1409,
    1418,1429,1442A,1473~1475,1483
    ~1485,1494~1496,1517
    3799 4w2i:AV
    (2.7Å)
    		 13 N/A N/A N/A synthetic
    construct
    32630    		 25306922 Assembly1
    rna:AA:4~1531 12~13,15~24
    rna:AW:1~76 19~21
    rna:AX:2~76 16~18
    3800 4w2i:AW
    (2.7Å)
    		 74 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    562    		 25306922 Assembly1
    rna:AA:4~1531 34~37
    rna:AV:12~24 34~37
    rna:BA:6~2906 19,37~38,55~56,64,74~76
    << < 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 > >>
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    Reference:
  • Chengxin Zhang, Lydia Freddolino (2024) "FURNA: a database for function annotations of RNA structures," PLOS Biology 22(7): e3002476.