SEQ2FUN

FURNA
Download all results in tab-seperated text for 14210 RNAs.
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  • Hover over Ligand to view the name of the ligand and the ligand-binding nucleotides on the RNA.

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    # PDB
    (Resolution)    		 Length EC number
    & GO term     		RNAcentral Rfam Taxon PubMed ATtRACT
    motif     		Ligand &
    binding nucleotides
    3901 4wqr:1K
    (3.15Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    K-12
    83333    		 26037619 Assembly1
    rna:13:4~1531 34~37
    rna:4K:13~26 34~37
    rna:1H:1~2902 17,19,37~38,56,64,74~76
    3902 4wqr:1L
    (3.15Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    K-12
    83333    		 26037619 Assembly2
    rna:1G:4~1530 34~37
    rna:14:1~2902 12,19,37~38,56,64,72,74~76
    3903 4wqr:2K
    (3.15Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000057545F RF00005 Escherichia
    coli
    K-12
    83333    		 26037619 Assembly1
    rna:13:4~1531 30~33,35,39~42
    rna:3K:1~76 40~41
    rna:4K:13~26 35~38
    rna:1H:1~2902 2~3,11~13,25~26,75~77
    3904 4wqr:2L
    (3.15Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000057545F RF00005 Escherichia
    coli
    K-12
    83333    		 26037619 Assembly2
    rna:1G:4~1530 31~33,35,39~42
    rna:4L:13~18 35~38
    rna:14:1~2902 2,11~13,25~26,75~77
    3905 4wqr:3K
    (3.15Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    K-12
    83333    		 26037619 Assembly1
    rna:13:4~1531 34~35
    rna:2K:1~77 35~36
    rna:4K:13~26 34~35
    rna:1H:1~2902 19,56,71,76
    3906 4wqr:3L
    (3.15Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    K-12
    83333    		 26037619 Assembly2
    rna:1G:4~1530 34,36
    rna:4L:13~18 35~36
    rna:14:1~2902 17,19,56,71,76
    3907 4wqr:4K
    (3.15Å)
    		 14 N/A N/A N/A Thermus
    thermophilus
    HB8
    300852    		 26037619 Assembly1
    rna:13:4~1531 13,15~23
    rna:1K:1~76 19~22
    rna:2K:1~77 16~18
    3908 4wqu:AA
    (2.8Å)
    		 2872 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001698E8 RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    HB8
    300852    		 25594181 Assembly1
    rna:AB:1~120 908~911,961,963~965
    rna:BA:4~1531 1748,1750~1751,1863,1867~1868,
    1877,1879,1934~1938,1941~1942,
    1969~1970,1981~1983,2873~2874
    rna:BW:1~76 1929~1931,1944~1946,2263~2265,
    2267,2462~2463,2614
    rna:BY:1~76 1882~1883,2134,2191,2406~2407,
    2433~2434,2444
    3909 4wqu:AB
    (2.8Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DEE8 RF00001 Thermus
    thermophilus
    HB8
    300852    		 25594181 Assembly1
    rna:AA:6~2906 78~81,97~98,100~102
    3910 4wqu:BA
    (2.8Å)
    		 1495 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DFED RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 25594181 Assembly1
    rna:AA:6~2906 702,784,899,1407~1409,1418,142
    9,1442A,1474,1483~1485,1494~14
    96,1517
    rna:BV:12~18 926,1400~1401,1498,1503,1505~1
    506
    rna:BW:1~76 790,966,1229,1338~1341,1400
    3911 4wqu:BW
    (2.8Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    str.
    K-12
    substr.
    MC4100
    1403831    		 25594181 Assembly1
    rna:AA:6~2906 2~3,11~13,24~25,74~76
    rna:BA:4~1531 29~32,34,38,40~41
    rna:BV:12~18 34~37
    3912 4wqu:BY
    (2.8Å)
    		 74 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    str.
    K-12
    substr.
    MC4100
    1403831    		 25594181 Assembly1
    rna:AA:6~2906 19,56,71~72,76
    3913 4wqu:CA
    (2.8Å)
    		 2868 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001698E8 RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    HB8
    300852    		 25594181 Assembly2
    rna:CB:1~120 861~864,915~919,958
    rna:DA:4~1532 1689,1700~1704,1832,1836~1837,
    1846,1848,1912~1914,1916,1919~
    1920,1947~1948,1959~1961,2863~
    2864
    rna:DW:1~76 1907~1909,1922~1924,2251~2253,
    2255~2256,2450~2451,2602
    rna:DY:1~76 2112,2169,2394~2395,2421~2422
    3914 4wqu:CB
    (2.8Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DEE8 RF00001 Thermus
    thermophilus
    HB8
    300852    		 25594181 Assembly2
    rna:CA:6~2897 78~81,90,97~98,100~102
    3915 4wqu:DA
    (2.8Å)
    		 1501 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DFED RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 25594181 Assembly2
    rna:CA:6~2897 702,783~784,899,1407~1410,1418
    ,1429,1442A,1473~1475,1483~148
    4,1494~1496,1517
    rna:DV:13~18 693,926,1400~1402,1498,1505~15
    06
    rna:DW:1~76 790,966,1229~1230,1338~1340,14
    00
    3916 4wqu:DW
    (2.8Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    str.
    K-12
    substr.
    MC4100
    1403831    		 25594181 Assembly2
    rna:CA:6~2897 2~3,11~13,24~25,74~76
    rna:DA:4~1532 30~32,34,38~39,41
    rna:DV:13~18 35~37
    rna:DY:1~76 39~41
    3917 4wqu:DY
    (2.8Å)
    		 73 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    str.
    K-12
    substr.
    MC4100
    1403831    		 25594181 Assembly2
    rna:CA:6~2897 19,56,76
    rna:DW:1~76 35~36
    3918 4wqy:AA
    (2.8Å)
    		 2852 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001698E8 RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    HB8
    300852    		 25594181 Assembly1
    rna:AB:1~120 908~910,961,963~965,1003
    rna:BA:4~1531 1736,1747~1751,1863,1867~1868,
    1877,1879,1934~1936,1938,1941~
    1942,1969~1970,1981~1982,2873~
    2874
    rna:BX:2~76 1929~1931,1944~1946,2086,2263~
    2265,2267,2462~2463,2614
    3919 4wqy:AB
    (2.8Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DEE8 RF00001 Thermus
    thermophilus
    HB8
    300852    		 25594181 Assembly1
    rna:AA:6~2906 78~81,90,97~98,100~101
    3920 4wqy:BA
    (2.8Å)
    		 1495 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DFED RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 25594181 Assembly1
    rna:AA:6~2906 702,783~784,899,1407~1409,1418
    ,1429,1442A,1473~1475,1483~148
    4,1494~1496,1517
    rna:BV:12~24 926,1196,1397,1400~1402,1498,1
    503~1505,1507
    rna:BX:2~76 790,966,1229~1230,1338~1340,14
    00
    3921 4wqy:BV
    (2.8Å)
    		 13 N/A N/A N/A synthetic
    construct
    32630    		 25594181 Assembly1
    rna:BA:4~1531 12~13,15~18,22~24
    rna:BX:2~76 16~18
    3922 4wqy:BX
    (2.8Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    str.
    K-12
    substr.
    MC4100
    1403831    		 25594181 Assembly1
    rna:AA:6~2906 2~3,11~13,24~25,74~76
    rna:BA:4~1531 30~32,34,38,40~41
    rna:BV:12~24 34~37
    3923 4wqy:CA
    (2.8Å)
    		 2848 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001698E8 RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    HB8
    300852    		 25594181 Assembly2
    rna:CB:1~120 861~863,915,917~919,958
    rna:DA:4~1532 1700~1701,1703~1704,1832,1836~
    1837,1846,1848,1895,1912~1916,
    1919~1920,1947~1948,1959~1961,
    2863~2864
    rna:DX:2~76 1907~1909,1922~1924,2251~2253,
    2255,2450~2451,2602
    3924 4wqy:CB
    (2.8Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DEE8 RF00001 Thermus
    thermophilus
    HB8
    300852    		 25594181 Assembly2
    rna:CA:6~2897 78~81,90,98,100~101
    3925 4wqy:DA
    (2.8Å)
    		 1501 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DFED RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 25594181 Assembly2
    rna:CA:6~2897 702,783~784,899,1407~1410,1418
    ,1429,1442A,1474~1475,1483~148
    4,1494~1496,1517
    rna:DV:13~18 693,926,1400~1402,1498
    rna:DX:2~76 790,966,1229~1230,1338~1340,14
    00
    3926 4wqy:DX
    (2.8Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    str.
    K-12
    substr.
    MC4100
    1403831    		 25594181 Assembly2
    rna:CA:6~2897 2~3,11~13,24~25,74~76
    rna:DA:4~1532 30~32,34,38,40~41
    rna:DV:13~18 34~37
    3927 4wr6:13
    (3.05Å)
    		 1498 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E226 RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 26037619 Assembly1
    rna:1K:1~85 530~531,1054,1493
    rna:2K:1~77 966,1229~1230,1338~1340,1400
    rna:4K:12~26 530,926,1196,1397,1400~1401,14
    92~1493,1498,1503~1505,1507
    rna:1H:1~2902 702,784,899,1407~1409,1418,142
    9~1430,1443,1473,1475,1483~148
    4,1494~1496,1517
    3928 4wr6:14
    (3.05Å)
    		 2907 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000868533 RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    HB8
    300852    		 26037619 Assembly2
    rna:1G:4~1531 1689,1700~1701,1703~1704,1832,
    1836~1837,1846,1848,1912~1916,
    1919~1920,1947~1949,1959~1961,
    2864
    rna:1L:1~85 1916,2482,2506~2507,2553~2555,
    2583~2585,2602
    rna:2L:1~77 1908,1922~1924,2064,2251~2253,
    2255,2450~2451,2602
    rna:3L:1~85 1851,2112,2169,2394~2395,2421~
    2422,2432
    rna:1J:1M~119 861~863,915,917~918,958
    3929 4wr6:16
    (3.05Å)
    		 122 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00005AB4A7 RF00001 Thermus
    thermophilus
    HB8
    300852    		 26037619 Assembly1
    rna:1H:1~2902 78~81,89A,97,99~100
    3930 4wr6:1G
    (3.05Å)
    		 1498 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000868551 RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 26037619 Assembly2
    rna:1L:1~85 530,1054,1493
    rna:2L:1~77 790,966,1229~1230,1338~1340,14
    00
    rna:4L:10~25 926~927,1196,1397,1400~1402,14
    92~1493,1498,1503~1505
    rna:14:1~2902 702,784,899,1407~1409,1418,142
    9,1443,1474~1475,1483~1484,149
    3~1496,1517
    3931 4wr6:1H
    (3.05Å)
    		 2912 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000868533 RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    HB8
    300852    		 26037619 Assembly1
    rna:13:4~1531 1689,1702~1704,1832,1836~1837,
    1846,1848,1912~1913,1915~1916,
    1919~1920,1947~1949,1959~1961,
    2863~2864
    rna:1K:1~85 881,897,1913,1916,2482,2506~25
    07,2553,2555,2583~2585,2602
    rna:2K:1~77 1907~1909,1922~1924,2251~2253,
    2255,2450~2451,2601~2602
    rna:3K:1~85 1851,2112,2169,2394~2395,2421~
    2422,2432
    rna:16:1M~119 861~863,915,917~919,958
    3932 4wr6:1J
    (3.05Å)
    		 122 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00005AB4A7 RF00001 Thermus
    thermophilus
    HB8
    300852    		 26037619 Assembly2
    rna:14:1~2902 78~80,89A,96~97,99~100
    3933 4wr6:1K
    (3.05Å)
    		 85 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00002D9DE2 RF00005 Escherichia
    coli
    K-12
    83333    		 26037619 Assembly1
    rna:13:4~1531 35~38
    rna:4K:12~26 35~38
    rna:1H:1~2902 12,18,38~39,65,72,83~85
    3934 4wr6:1L
    (3.05Å)
    		 85 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00002D9DE2 RF00005 Escherichia
    coli
    K-12
    83333    		 26037619 Assembly2
    rna:1G:4~1531 35~36,38
    rna:4L:10~25 35~37
    rna:14:1~2902 12,72,83~85
    3935 4wr6:2K
    (3.05Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000057545F RF00005 Escherichia
    coli
    K-12
    83333    		 26037619 Assembly1
    rna:13:4~1531 30~33,35,41~42
    rna:3K:1~85 40~41
    rna:4K:12~26 35~38
    rna:1H:1~2902 2~3,11~13,25~26,75~77
    3936 4wr6:2L
    (3.05Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000057545F RF00005 Escherichia
    coli
    K-12
    83333    		 26037619 Assembly2
    rna:1G:4~1531 31~33,35,39,41~42
    rna:3L:1~85 40~41
    rna:4L:10~25 35~38
    rna:14:1~2902 2~3,12~13,25~26,75~77
    3937 4wr6:3K
    (3.05Å)
    		 85 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00002D9DE2 RF00005 Escherichia
    coli
    K-12
    83333    		 26037619 Assembly1
    rna:1H:1~2902 18,65,80~81,85
    3938 4wr6:3L
    (3.05Å)
    		 85 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00002D9DE2 RF00005 Escherichia
    coli
    K-12
    83333    		 26037619 Assembly2
    rna:14:1~2902 18,65,80~81,85
    3939 4wr6:4K
    (3.05Å)
    		 15 N/A N/A N/A Thermus
    thermophilus
    HB8
    300852    		 26037619 Assembly1
    rna:13:4~1531 12~13,15~23
    rna:1K:1~85 19~21
    rna:2K:1~77 16~18
    3940 4wr6:4L
    (3.05Å)
    		 16 N/A N/A N/A Thermus
    thermophilus
    HB8
    300852    		 26037619 Assembly2
    rna:1G:4~1531 13,15~20,22~23
    rna:1L:1~85 20~22
    rna:2L:1~77 16~18
    3941 4wra:13
    (3.05Å)
    		 1505 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E226 RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 26037619 Assembly1
    rna:1K:1~85 530,1054,1493
    rna:2K:1~77 790,966,1229~1230,1338~1340,14
    00
    rna:4K:13~24 926,1196,1397,1400~1401,1492~1
    493,1498,1503,1505
    rna:1H:1~2902 702,783~784,899~900,1407~1409,
    1418,1429,1443,1473~1475,1483~
    1484,1494~1495,1517
    3942 4wra:14
    (3.05Å)
    		 2909 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000868544 RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    HB8
    300852    		 26037619 Assembly2
    rna:1G:4~1530 1689,1700~1701,1703~1704,1832,
    1836,1846,1848,1912~1913,1916,
    1919~1920,1947~1948,1959~1961,
    2864
    rna:1L:1~85 882,897,1913,1916,2482,2506~25
    07,2553,2555,2583~2584,2602
    rna:2L:1~77 1907~1909,1922~1924,2064,2251~
    2253,2255,2450~2451,2601~2602
    rna:3L:1~85 1851,2112,2169,2394~2395,2421~
    2422,2432
    rna:1J:1M~119 861~863,915,917~918,958
    3943 4wra:16
    (3.05Å)
    		 122 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00005AB4A7 RF00001 Thermus
    thermophilus
    HB8
    300852    		 26037619 Assembly1
    rna:1H:1~2902 78~81,89A,97,99~100
    3944 4wra:1G
    (3.05Å)
    		 1504 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E226 RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 26037619 Assembly2
    rna:1L:1~85 530~531,1054,1493
    rna:2L:1~77 790,966,1229~1230,1338~1340,14
    00
    rna:3L:1~85 693~694
    rna:4L:12~23 530,926~927,1400~1401,1492~149
    3,1498,1503,1505~1506
    rna:14:1~2902 702,784,899~900,1407~1409,1418
    ,1429,1443,1474~1475,1483~1485
    ,1493~1496,1517
    3945 4wra:1H
    (3.05Å)
    		 2912 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000868544 RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    HB8
    300852    		 26037619 Assembly1
    rna:13:4~1531 1689,1701~1704,1832,1836~1837,
    1846,1848,1912~1913,1915~1916,
    1919~1920,1947~1948,1959~1961,
    2863~2864
    rna:1K:1~85 881,883,897,1913,1916,2482~248
    3,2506~2508,2553,2555,2573,258
    3~2585,2602
    rna:2K:1~77 1907~1909,1922~1924,2251~2253,
    2255,2450~2451,2601~2602
    rna:3K:1~85 1851,2112,2169,2394~2395,2421~
    2422,2432
    rna:16:1M~119 861~863,915,917~919,958
    3946 4wra:1J
    (3.05Å)
    		 122 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00005AB4A7 RF00001 Thermus
    thermophilus
    HB8
    300852    		 26037619 Assembly2
    rna:14:1~2902 78~80,89A,96~97,99~100
    3947 4wra:1K
    (3.05Å)
    		 85 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00002D9DE2 RF00005 Escherichia
    coli
    562    		 26037619 Assembly1
    rna:13:4~1531 35~38
    rna:4K:13~24 35,37~38
    rna:1H:1~2902 12,18,38~39,65,72,83~85
    3948 4wra:1L
    (3.05Å)
    		 85 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00002D9DE2 RF00005 Escherichia
    coli
    562    		 26037619 Assembly2
    rna:1G:4~1530 35~38
    rna:4L:12~23 35~37
    rna:14:1~2902 12,18~19,38~39,72,83~85
    3949 4wra:2K
    (3.05Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000057545F RF00005 Escherichia
    coli
    562    		 26037619 Assembly1
    rna:13:4~1531 31~33,35,39,41~42
    rna:3K:1~85 40~41
    rna:4K:13~24 35~38
    rna:1H:1~2902 2,11~13,25~26,75~77
    3950 4wra:2L
    (3.05Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000057545F RF00005 Escherichia
    coli
    562    		 26037619 Assembly2
    rna:1G:4~1530 31~33,35,39~42
    rna:3L:1~85 40~41
    rna:4L:12~23 35~38
    rna:14:1~2902 2~3,12~13,25,75~77
    3951 4wra:3K
    (3.05Å)
    		 85 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00002D9DE2 RF00005 Escherichia
    coli
    562    		 26037619 Assembly1
    rna:1H:1~2902 18,65,80~81,85
    3952 4wra:3L
    (3.05Å)
    		 85 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00002D9DE2 RF00005 Escherichia
    coli
    562    		 26037619 Assembly2
    rna:2L:1~77 36~37
    rna:14:1~2902 18~19,65,80~81,85
    3953 4wra:4K
    (3.05Å)
    		 12 N/A N/A N/A Thermus
    thermophilus
    HB8
    300852    		 26037619 Assembly1
    rna:13:4~1531 13,15~20,22~23
    rna:1K:1~85 19~21
    rna:2K:1~77 16~18
    3954 4wra:4L
    (3.05Å)
    		 12 N/A N/A N/A Thermus
    thermophilus
    HB8
    300852    		 26037619 Assembly2
    rna:1G:4~1530 12~13,15~21
    rna:1L:1~85 20~22
    rna:2L:1~77 16~18
    3955 4wro:13
    (3.05Å)
    		 1497 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E226 RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 26037619 Assembly1
    rna:1K:1~76 530,1054,1493
    rna:2K:1~77 790,966,1229~1230,1338~1340,14
    00
    rna:4K:13~25 530,926,1196,1397,1400~1401,14
    92~1493,1498,1503,1505,1507
    rna:1H:1~2902 702,783~784,899,1407~1409,1418
    ,1429~1430,1443,1473~1475,1483
    ~1484,1494~1496,1517
    3956 4wro:14
    (3.05Å)
    		 2909 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000868533 RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    HB8
    300852    		 26037619 Assembly2
    rna:1L:1~76 881~882,897,2483,2507,2553~255
    5,2583~2584,2602
    rna:2L:1~77 1907~1908,1922~1924,2251~2253,
    2255,2450~2451,2601~2602
    rna:3L:1~76 1851~1852,1893,2111~2112,2169,
    2394~2395,2421~2422,2432
    rna:1J:1M~119 861~864,915~919,958,1026~1027
    rna:1G:4~1530 1689,1700~1701,1703~1704,1832,
    1836~1837,1846,1848,1895,1912~
    1916,1919~1920,1947~1948,1950,
    1959~1961
    3957 4wro:16
    (3.05Å)
    		 122 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00005AB4A7 RF00001 Thermus
    thermophilus
    HB8
    300852    		 26037619 Assembly1
    rna:1H:1~2902 78~81,89A,96~97,99~100
    3958 4wro:1G
    (3.05Å)
    		 1497 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E226 RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 26037619 Assembly2
    rna:1L:1~76 530,1054,1196,1397,1493
    rna:2L:1~77 790,1229~1230,1338~1340,1400
    rna:3L:1~76 1340,1382~1383
    rna:4L:13~21 926,1397,1400~1402,1492,1498,1
    503,1505,1507
    rna:14:1~2902 702,784,899~900,1407~1409,1418
    ,1420,1429,1474~1475,1483~1484
    ,1493~1496,1517
    3959 4wro:1H
    (3.05Å)
    		 2912 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000868533 RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    HB8
    300852    		 26037619 Assembly1
    rna:13:4~1530 1689,1701~1704,1832,1836~1837,
    1846,1848,1912~1913,1915~1916,
    1919~1920,1947~1948,1959~1960,
    2863~2864
    rna:1K:1~76 882~883,896~897,1913,2483,2506
    ~2507,2553,2555,2583~2585,2602
    rna:2K:1~77 1907~1909,1922~1924,2251~2253,
    2255,2450~2451,2601~2602
    rna:3K:1~76 1851~1852,1893,2111~2112,2394~
    2395,2421~2422,2432
    rna:16:1M~119 861~864,915,917~919,958
    3960 4wro:1J
    (3.05Å)
    		 122 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00005AB4A7 RF00001 Thermus
    thermophilus
    HB8
    300852    		 26037619 Assembly2
    rna:14:1~2902 78~81,88,89A,96~97,99~100
    3961 4wro:1K
    (3.05Å)
    		 74 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    K-12
    83333    		 26037619 Assembly1
    rna:13:4~1530 34~37
    rna:4K:13~25 34~37
    rna:1H:1~2902 19,37~38,55~56,64,74~76
    3962 4wro:1L
    (3.05Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    K-12
    83333    		 26037619 Assembly2
    rna:4L:13~21 34~37
    rna:14:1~2902 12,19,56,64,73~76
    rna:1G:4~1530 34~35,37
    3963 4wro:2K
    (3.05Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000057545F RF00005 Escherichia
    coli
    K-12
    83333    		 26037619 Assembly1
    rna:13:4~1530 30~33,35,39~42
    rna:4K:13~25 35~38
    rna:1H:1~2902 2~3,11~13,25~26,75~77
    3964 4wro:2L
    (3.05Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000057545F RF00005 Escherichia
    coli
    K-12
    83333    		 26037619 Assembly2
    rna:4L:13~21 35~38
    rna:14:1~2902 2~3,12~13,25~26,75~77
    rna:1G:4~1530 31~33,35,39,41~42
    3965 4wro:3K
    (3.05Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    K-12
    83333    		 26037619 Assembly1
    rna:1H:1~2902 17,19,56,71,76
    3966 4wro:3L
    (3.05Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    K-12
    83333    		 26037619 Assembly2
    rna:4L:13~21 35~36
    rna:14:1~2902 17,19,56,70~71,76
    rna:1G:4~1530 34,36
    3967 4wro:4K
    (3.05Å)
    		 13 N/A URS0000868513 N/A Thermus
    thermophilus
    HB8
    300852    		 26037619 Assembly1
    rna:13:4~1530 13,15~21,23
    rna:1K:1~76 19~22
    rna:2K:1~77 16~18
    3968 4wrt:R
    (2.7Å)
    		 15 N/A URS000080E01C N/A Influenza
    B
    virus
    11520    		 25409151 Assembly1
    rna:V:1~14 6~9
    3969 4wrt:V
    (2.7Å)
    		 14 N/A URS000080E200 N/A Influenza
    B
    virus
    11520    		 25409151 Assembly1
    rna:R:4~18 11~14
    3970 4wsa:R
    (3.4Å)
    		 14 N/A URS000080E01C N/A Influenza
    B
    virus
    11520    		 25409151 Assembly1
    rna:V:1~14 4,6~9
    3971 4wsa:V
    (3.4Å)
    		 14 N/A URS000080E200 N/A Influenza
    B
    virus
    11520    		 25409151 Assembly1
    rna:R:1~14 11~14
    3972 4wsb:R
    (2.65Å)
    		 13 N/A URS000080E01C N/A unidentified
    influenza
    virus
    11309    		 25409151 Assembly1
    rna:V:1~16 5~9
    3973 4wsb:V
    (2.65Å)
    		 16 N/A URS000080DFE6 N/A unidentified
    influenza
    virus
    11309    		 25409151 Assembly1
    rna:R:1~13 11~15
    3974 4wsd:13
    (2.95Å)
    		 1498 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000868551 RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 26037619 Assembly1
    rna:1K:1~76 530~531,1054,1493
    rna:2K:1~77 790,966,1229~1230,1338~1340,14
    00
    rna:3K:1~76 693~694,1340
    rna:4K:13~25 530,926,1196,1397,1400~1401,14
    92~1493,1498,1503,1505,1507
    rna:1H:1~2902 702,783~784,899,1407~1409,1418
    ,1429,1443,1473~1475,1483~1485
    ,1494~1496,1517
    3975 4wsd:14
    (2.95Å)
    		 2909 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000868533 RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    HB8
    300852    		 26037619 Assembly2
    rna:1G:4~1531 1689,1700~1704,1832,1836~1837,
    1846,1848,1912~1914,1916,1919~
    1920,1947~1949,1959~1961,2864
    rna:1L:1~76 882,896~897,1913,1916,1942,248
    3,2506~2507,2553~2555,2583~258
    4,2602
    rna:2L:1~77 1907~1909,1922~1924,2251~2253,
    2255,2450~2451,2601~2602
    rna:3L:1~76 1851~1852,1893,2111~2112,2169,
    2394~2395,2421~2422,2432
    rna:1J:1M~119 861~864,915,917~919,958
    3976 4wsd:16
    (2.95Å)
    		 122 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00005AB4A7 RF00001 Thermus
    thermophilus
    HB8
    300852    		 26037619 Assembly1
    rna:1H:1~2902 78~81,89A,97,99~101
    3977 4wsd:1G
    (2.95Å)
    		 1498 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000868551 RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 26037619 Assembly2
    rna:1L:1~76 530,1054,1397,1493
    rna:2L:1~77 790,966,1229~1230,1338~1340,14
    00
    rna:3L:1~76 694,1340,1382~1383
    rna:4L:12~22 530,926,1397,1400~1402,1492~14
    93,1498,1503,1505,1507
    rna:14:1~2902 702,784,899~900,1407~1409,1418
    ,1429~1430,1443,1473~1475,1483
    ~1484,1493~1496,1517
    3978 4wsd:1H
    (2.95Å)
    		 2912 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000868533 RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    HB8
    300852    		 26037619 Assembly1
    rna:13:4~1531 1689,1701~1704,1832,1836~1837,
    1846,1848,1912~1913,1915~1916,
    1919~1920,1947~1949,1959~1961,
    2863~2864
    rna:1K:1~76 881~883,896~897,1913,2482~2483
    ,2506~2507,2553,2555,2583~2585
    ,2602
    rna:2K:1~77 1907~1909,1922~1924,2251~2253,
    2255,2450~2451,2601~2602
    rna:3K:1~76 1851~1852,1893,2112,2169,2394~
    2395,2421~2422,2432
    rna:16:1M~119 861~864,915~919,958
    3979 4wsd:1J
    (2.95Å)
    		 122 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00005AB4A7 RF00001 Thermus
    thermophilus
    HB8
    300852    		 26037619 Assembly2
    rna:14:1~2902 78~81,88,89A,96~97,99~100
    3980 4wsd:1K
    (2.95Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    K-12
    83333    		 26037619 Assembly1
    rna:13:4~1531 34~37
    rna:4K:13~25 34~37
    rna:1H:1~2902 19,37~38,56,64,74~76
    3981 4wsd:1L
    (2.95Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    K-12
    83333    		 26037619 Assembly2
    rna:1G:4~1531 34~35,37
    rna:4L:12~22 34~37
    rna:14:1~2902 12,19,38,56,64,72~76
    3982 4wsd:2K
    (2.95Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000057545F RF00005 Escherichia
    coli
    K-12
    83333    		 26037619 Assembly1
    rna:13:4~1531 30~33,35,39~42
    rna:4K:13~25 35~38
    rna:1H:1~2902 2~3,11~13,25~26,75~77
    3983 4wsd:2L
    (2.95Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000057545F RF00005 Escherichia
    coli
    K-12
    83333    		 26037619 Assembly2
    rna:1G:4~1531 31~33,35,39~42
    rna:4L:12~22 35~38
    rna:14:1~2902 3,11~13,25~26,75~77
    3984 4wsd:3K
    (2.95Å)
    		 75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    K-12
    83333    		 26037619 Assembly1
    rna:13:4~1531 36~37
    rna:1H:1~2902 19,56,71,76
    3985 4wsd:3L
    (2.95Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    K-12
    83333    		 26037619 Assembly2
    rna:1G:4~1531 34,36,38
    rna:4L:12~22 35~36
    rna:14:1~2902 17,19,56,70~71,76
    3986 4wsd:4K
    (2.95Å)
    		 13 N/A URS0000868513 N/A Thermus
    thermophilus
    HB8
    300852    		 26037619 Assembly1
    rna:13:4~1531 13,15~23
    rna:1K:1~76 19~22
    rna:2K:1~77 16~18
    3987 4wsd:4L
    (2.95Å)
    		 11 N/A N/A N/A Thermus
    thermophilus
    HB8
    300852    		 26037619 Assembly2
    rna:1G:4~1531 13,15~16,18~22
    rna:1L:1~76 19~22
    rna:2L:1~77 16~18
    3988 4wsm:13
    (3.3Å)
    		 1507 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E226 RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 26037619 Assembly1
    rna:1K:1~87 530~531,1054,1493
    rna:2K:1~87 790,966,1229~1230,1338~1340,14
    00
    rna:4K:32~52 530,693,723,926,1397,1400~1401
    ,1492~1493,1498,1534~1540
    rna:1H:1~2902 702,783~784,899,1407~1409,1418
    ,1429,1443,1474~1475,1483~1484
    ,1494~1496,1517
    3989 4wsm:14
    (3.3Å)
    		 2909 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000868533 RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    HB8
    300852    		 26037619 Assembly2
    rna:1G:4~1542 1689,1701,1703~1704,1832,1836~
    1837,1846,1848,1912~1913,1915~
    1916,1919~1920,1947~1949,1959~
    1961,2863~2864
    rna:1L:1~87 882,1913,1942,2470,2482,2506~2
    508,2553,2555,2573,2583~2585
    rna:2L:1~87 1907~1909,1922~1924,2064,2251~
    2253,2255,2279,2439,2450~2451,
    2601~2602
    rna:3L:1~87 1850~1851,1892~1893,2111~2112,
    2169,2394~2395,2421~2422,2432
    rna:1J:1M~119 861~864,915,917~919,958,1026
    3990 4wsm:16
    (3.3Å)
    		 122 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00005AB4A7 RF00001 Thermus
    thermophilus
    HB8
    300852    		 26037619 Assembly1
    rna:1H:1~2902 78~81,89A,96~97,99~100
    3991 4wsm:1G
    (3.3Å)
    		 1513 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E226 RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 26037619 Assembly2
    rna:1L:1~87 530~531,1054,1493
    rna:2L:1~87 790,966,1229,1338~1340,1400
    rna:3L:1~87 694,1382~1383
    rna:4L:30~53 530,693,723,926,1397,1400~1401
    ,1492~1493,1498,1533~1538,1540
    ~1541
    rna:14:1~2902 702,784,899,1407~1409,1418,142
    9,1443,1474~1475,1483~1484,149
    3~1496,1517
    3992 4wsm:1H
    (3.3Å)
    		 2912 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000868533 RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    HB8
    300852    		 26037619 Assembly1
    rna:13:4~1540 1700~1701,1703~1704,1832,1836~
    1837,1846,1848,1912~1913,1915~
    1916,1919~1920,1947~1949,1959~
    1961,2863~2864
    rna:1K:1~87 881~882,896~897,1913,1942,2482
    ,2506~2507,2553,2555,2583~2585
    ,2602
    rna:2K:1~87 1908~1909,1922~1924,2064,2251~
    2253,2439,2450~2451,2601~2602
    rna:3K:1~87 1850~1851,1891,1893,2112,2169~
    2170,2394~2395,2421~2422
    rna:16:1M~119 861~863,915~919,958
    3993 4wsm:1J
    (3.3Å)
    		 122 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00005AB4A7 RF00001 Thermus
    thermophilus
    HB8
    300852    		 26037619 Assembly2
    rna:14:1~2902 78~81,88,89A,97,99~100
    3994 4wsm:1K
    (3.3Å)
    		 87 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00004630EA RF00005 Escherichia
    coli
    K-12
    83333    		 26037619 Assembly1
    rna:13:4~1540 35~38
    rna:4K:32~52 35~38
    rna:1H:1~2902 19~20,38,67,74,83,85~87
    3995 4wsm:1L
    (3.3Å)
    		 87 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00004630EA RF00005 Escherichia
    coli
    K-12
    83333    		 26037619 Assembly2
    rna:1G:4~1542 35~38
    rna:4L:30~53 35~38
    rna:14:1~2902 20,38~39,63,74,83,85~87
    3996 4wsm:2K
    (3.3Å)
    		 79 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00004630EA RF00005 Escherichia
    coli
    K-12
    83333    		 26037619 Assembly1
    rna:13:4~1540 31~33,35,39,41~42
    rna:4K:32~52 35~38
    rna:1H:1~2902 11~12,25~26,85~87
    3997 4wsm:2L
    (3.3Å)
    		 80 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00004630EA RF00005 Escherichia
    coli
    K-12
    83333    		 26037619 Assembly2
    rna:1G:4~1542 31~33,35,39~42
    rna:4L:30~53 35~38
    rna:14:1~2902 3,11~13,25~26,74,85~87
    3998 4wsm:3K
    (3.3Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00004630EA RF00005 Escherichia
    coli
    K-12
    83333    		 26037619 Assembly1
    rna:4K:32~52 35~36
    rna:1H:1~2902 3~4,18,67,81~82,87
    3999 4wsm:3L
    (3.3Å)
    		 75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00004630EA RF00005 Escherichia
    coli
    K-12
    83333    		 26037619 Assembly2
    rna:1G:4~1542 35,39
    rna:4L:30~53 35~37
    rna:14:1~2902 3~4,18,67,81~82,87
    4000 4wsm:4K
    (3.3Å)
    		 16 N/A N/A N/A Thermus
    thermophilus
    HB8
    300852    		 26037619 Assembly1
    rna:13:4~1540 32~38,44~52
    rna:1K:1~87 49~51
    rna:2K:1~87 46~48
    rna:3K:1~87 44~45
    << < 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 > >>
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    Reference:
  • Chengxin Zhang, Lydia Freddolino (2024) "FURNA: a database for function annotations of RNA structures," PLOS Biology 22(7): e3002476.