SEQ2FUN

FURNA
Download all results in tab-seperated text for 14210 RNAs.
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  • Hover over Ligand to view the name of the ligand and the ligand-binding nucleotides on the RNA.

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    # PDB
    (Resolution)    		 Length EC number
    & GO term     		RNAcentral Rfam Taxon PubMed ATtRACT
    motif     		Ligand &
    binding nucleotides
    4001 4wsm:4L
    (3.3Å)
    		 21 N/A N/A N/A Thermus
    thermophilus
    HB8
    300852    		 26037619 Assembly2
    rna:1G:4~1542 30,32~40,44,47~53
    rna:1L:1~87 50~53
    rna:2L:1~87 47~49
    rna:3L:1~87 44~45
    4002 4wt1:13
    (3.05Å)
    		 1498 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000868551 RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 26037619 Assembly1
    rna:1K:1~76 530~531,1054,1493
    rna:2K:1~77 790,966,1229~1230,1338~1340,14
    00
    rna:4K:13~25 530,926,1196,1397,1400~1401,14
    92~1493,1498,1503,1505,1507
    rna:1H:1~2902 702,783~784,899,1407~1409,1418
    ,1429~1430,1443,1473~1475,1483
    ~1484,1494~1496,1517
    4003 4wt1:14
    (3.05Å)
    		 2909 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000868533 RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    HB8
    300852    		 26037619 Assembly2
    rna:1G:4~1530 1689,1700~1704,1832,1836~1837,
    1846,1848,1912~1913,1915~1916,
    1919~1920,1947~1949,1959~1961,
    2863~2864
    rna:1L:1~76 881~882,1913,1916,2482~2483,25
    06~2507,2553~2555,2583~2584,26
    02
    rna:2L:1~77 1907~1909,1922~1924,2064,2251~
    2253,2255,2450~2451,2601~2602
    rna:3L:1~76 1851~1852,2111~2112,2169,2394~
    2395,2421~2422,2432
    rna:1J:1M~119 861~863,915~919,958,1026
    4004 4wt1:16
    (3.05Å)
    		 122 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00005AB4A7 RF00001 Thermus
    thermophilus
    HB8
    300852    		 26037619 Assembly1
    rna:1H:1~2902 78~81,89A,97,99~100
    4005 4wt1:1G
    (3.05Å)
    		 1497 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000868551 RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 26037619 Assembly2
    rna:1L:1~76 530,1054,1397,1493
    rna:2L:1~77 790,966,1229~1230,1338~1340,14
    00
    rna:3L:1~76 1340,1382
    rna:4L:12~21 926,1397,1400~1402,1498,1503,1
    505,1507
    rna:14:1~2902 702,784,899~900,1407~1409,1418
    ,1429,1443,1473~1475,1483~1484
    ,1493~1496,1517
    4006 4wt1:1H
    (3.05Å)
    		 2912 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000868533 RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    HB8
    300852    		 26037619 Assembly1
    rna:13:4~1531 1689,1701~1704,1832,1836~1837,
    1846,1848,1912~1913,1915~1916,
    1919~1920,1947~1948,1959~1961,
    2863~2864
    rna:1K:1~76 881~883,896~897,1913,2483,2506
    ~2507,2553~2555,2583~2585,2602
    rna:2K:1~77 1907~1909,1922~1924,2251~2253,
    2255,2450~2451,2602
    rna:3K:1~76 1851~1852,2112,2169,2394~2395,
    2421~2422,2432
    rna:16:1M~119 861~864,915,917~919,958
    4007 4wt1:1J
    (3.05Å)
    		 122 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00005AB4A7 RF00001 Thermus
    thermophilus
    HB8
    300852    		 26037619 Assembly2
    rna:14:1~2902 78~81,88,89A,97,99~100
    4008 4wt1:1K
    (3.05Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    K-12
    83333    		 26037619 Assembly1
    rna:13:4~1531 34~37
    rna:4K:13~25 34~37
    rna:1H:1~2902 19,37~38,56,64,74~76
    4009 4wt1:1L
    (3.05Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    K-12
    83333    		 26037619 Assembly2
    rna:1G:4~1530 34~35,37
    rna:4L:12~21 35~37
    rna:14:1~2902 12,19,38,64,74~76
    4010 4wt1:2K
    (3.05Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000057545F RF00005 Escherichia
    coli
    K-12
    83333    		 26037619 Assembly1
    rna:13:4~1531 31~33,35,39,41~42
    rna:4K:13~25 35~38
    rna:1H:1~2902 2~3,11~13,25~26,75~77
    4011 4wt1:2L
    (3.05Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000057545F RF00005 Escherichia
    coli
    K-12
    83333    		 26037619 Assembly2
    rna:1G:4~1530 31~33,35,39~42
    rna:4L:12~21 35~38
    rna:14:1~2902 2~3,11~13,25~26,75~77
    4012 4wt1:3K
    (3.05Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    K-12
    83333    		 26037619 Assembly1
    rna:1H:1~2902 19,56,71,76
    4013 4wt1:3L
    (3.05Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    K-12
    83333    		 26037619 Assembly2
    rna:1G:4~1530 34,36
    rna:14:1~2902 17,19,56,71,76
    4014 4wt1:4K
    (3.05Å)
    		 13 N/A N/A N/A Thermus
    thermophilus
    HB8
    300852    		 26037619 Assembly1
    rna:13:4~1531 13,15~23
    rna:1K:1~76 19~22
    rna:2K:1~77 16~18
    4015 4wt8:Ab
    (3.4Å)
    		 1504 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E260 RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 25562208 Assembly1
    rna:A2:14~22 514,904,1383~1386,1470~1471,14
    76,1483
    rna:C2:1~75 514,1037,1471
    rna:C4:1~77 774,944,1211~1212,1320~1322,13
    83
    rna:C1:5~2905 686,768,877,1390~1392,1401,141
    2,1426,1451~1453,1461~1462,147
    1~1474,1495
    4016 4wt8:B2
    (3.4Å)
    		 10 N/A N/A N/A Thermus
    thermophilus
    HB8
    300852    		 25562208 Assembly2
    rna:Bb:6~1509 13~21
    rna:D4:2~77 16~18
    rna:DV:1~55 19~21
    4017 4wt8:Bb
    (3.4Å)
    		 1504 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E260 RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 25562208 Assembly2
    rna:B2:13~22 514,677,772,904,1383~1384,1470
    ~1471,1476,1481,1483
    rna:D4:2~77 774,944,1211~1212,1320~1322,13
    83
    rna:D1:5~2905 686,767~768,877,1390~1392,1401
    ,1412,1426,1451~1453,1461~1462
    ,1471~1474,1495
    rna:DV:1~55 514,1037,1471
    4018 4wt8:C1
    (3.4Å)
    		 2807 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E136 RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    HB8
    300852    		 25562208 Assembly1
    rna:Ab:6~1509 1747~1749,1862,1867,1876,1878,
    1933~1934,1936~1937,1940~1941,
    1968~1969,1980~1981,2873
    rna:C2:1~75 927~928,942~943,1934,1963,2494
    ,2518,2564~2566,2613
    rna:C3:1~76 1881,2133,2190,2201,2405~2406,
    2432~2433
    rna:C4:1~77 1928~1930,1943~1945,2084,2262~
    2264,2266,2461~2462,2613
    rna:Cs:1~119 907~909,960~964,1002
    4019 4wt8:C2
    (3.4Å)
    		 75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Thermus
    thermophilus
    HB8
    300852    		 25562208 Assembly1
    rna:A2:14~22 34~37
    rna:Ab:6~1509 34~37
    rna:C1:5~2905 19,37~38,55~56,64,72,74~75
    4020 4wt8:C3
    (3.4Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Thermus
    thermophilus
    HB8
    300852    		 25562208 Assembly1
    rna:C4:1~77 35~36
    rna:C1:5~2905 17,19,56,71~72,76
    4021 4wt8:C4
    (3.4Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Thermus
    thermophilus
    HB8
    300852    		 25562208 Assembly1
    rna:A2:14~22 35~38
    rna:Ab:6~1509 31~33,35,39~42
    rna:C1:5~2905 2~3,11~13,25~26,75~77
    4022 4wt8:Cs
    (3.4Å)
    		 119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DE2B RF00001 Thermus
    thermophilus
    HB8
    300852    		 25562208 Assembly1
    rna:C1:5~2905 78~81,90,97~98,100~101
    4023 4wt8:D1
    (3.4Å)
    		 2807 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E136 RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    HB8
    300852    		 25562208 Assembly2
    rna:Bb:6~1509 1735,1747~1749,1862,1866~1867,
    1876,1878,1933~1934,1936~1937,
    1940~1941,1968~1969,1980~1981,
    2872~2873
    rna:D2:38~57 942~943
    rna:D3:1~76 1881~1882,2133,2190,2405~2406,
    2432~2433
    rna:D4:2~77 1928~1930,1944~1945,2084,2262~
    2264,2461~2462,2596
    rna:Ds:1~119 907~909,960,962~964
    rna:DV:1~55 927~928,1934,2494,2518,2566
    4024 4wt8:D2
    (3.4Å)
    		 20 N/A URS000080E22B N/A Mitsuaria
    sp.
    67
    308052    		 25562208 Assembly2
    rna:D1:5~2905 55~56
    rna:DV:1~55 38~46,48~53,55,57
    4025 4wt8:D3
    (3.4Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Thermus
    thermophilus
    HB8
    300852    		 25562208 Assembly2
    rna:D4:2~77 35~36
    rna:D1:5~2905 19,56,72,76
    4026 4wt8:D4
    (3.4Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00002905B5 RF00005 Mitsuaria
    sp.
    67
    308052    		 25562208 Assembly2
    rna:B2:13~22 35~38
    rna:Bb:6~1509 31~33,35,39~42
    rna:D1:5~2905 11~13,25~26,75~77
    4027 4wt8:DV
    (3.4Å)
    		 55 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080DF95 RF00005 Mitsuaria
    sp.
    67
    308052    		 25562208 Assembly2
    rna:B2:13~22 34~37
    rna:Bb:6~1509 34~37
    rna:D2:38~57 7~10,15,18~19,21,26~31,37~39,4
    1~45
    rna:D1:5~2905 16,19,37,44,54~55
    4028 4wt8:Ds
    (3.4Å)
    		 119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DE2B RF00001 Thermus
    thermophilus
    HB8
    300852    		 25562208 Assembly2
    rna:D1:5~2905 78~81,97~98,100~101
    4029 4wu1:13
    (3.2Å)
    		 1501 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E226 RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 26037619 Assembly1
    rna:2K:1~85 790,966,1229~1230,1338~1340,14
    00
    rna:4K:12~22 530,926~927,1397,1400~1401,140
    3,1493,1498,1503,1505,1507
    rna:1H:1~2902 702,784,899,1407~1409,1418,142
    9,1443,1473~1475,1483~1484,149
    2,1494~1496,1517
    4030 4wu1:14
    (3.2Å)
    		 2909 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000868533 RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    HB8
    300852    		 26037619 Assembly2
    rna:1G:4~1533 1701,1703~1704,1832,1836~1837,
    1846,1848,1912~1916,1919~1920,
    1947~1949,1959~1960,2863~2864
    rna:2L:1~85 1907~1909,1922~1924,2251~2253,
    2255,2450~2451,2601~2602
    rna:3L:1~85 1851,2112,2169,2394~2395,2421~
    2422
    rna:1J:1M~119 861~864,915,917~919,958
    4031 4wu1:16
    (3.2Å)
    		 122 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00005AB4A7 RF00001 Thermus
    thermophilus
    HB8
    300852    		 26037619 Assembly1
    rna:1H:1~2902 78~81,89A,96~97,99~101
    4032 4wu1:1G
    (3.2Å)
    		 1504 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000868551 RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 26037619 Assembly2
    rna:2L:1~85 790,966,1229~1230,1338~1340,14
    00
    rna:4L:13~18 926,1401~1402,1498,1503,1505,1
    507
    rna:14:1~2902 702,783~784,899,1407~1410,1418
    ,1429,1443,1474,1483~1484,1492
    ,1494~1496,1517
    4033 4wu1:1H
    (3.2Å)
    		 2912 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000868533 RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    HB8
    300852    		 26037619 Assembly1
    rna:13:4~1533 1689,1701~1704,1832,1836~1837,
    1846,1848,1912~1913,1915~1916,
    1919~1920,1947~1948,1959~1961,
    2863~2864
    rna:2K:1~85 1908~1909,1922~1924,2251~2253,
    2450~2451,2601~2602
    rna:3K:1~85 1851~1852,2112,2169,2394~2395,
    2421~2422,2432
    rna:16:1M~119 861~864,915~919,958
    4034 4wu1:1J
    (3.2Å)
    		 122 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00005AB4A7 RF00001 Thermus
    thermophilus
    HB8
    300852    		 26037619 Assembly2
    rna:14:1~2902 78~81,89A,96~97,99~100
    4035 4wu1:2K
    (3.2Å)
    		 82 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00002D9DE2 RF00005 Escherichia
    coli
    562    		 26037619 Assembly1
    rna:13:4~1533 31~32,35,39,41~42
    rna:3K:1~85 40~41
    rna:4K:12~22 35~38
    rna:1H:1~2902 12,25,83~85
    4036 4wu1:2L
    (3.2Å)
    		 78 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00002D9DE2 RF00005 Escherichia
    coli
    562    		 26037619 Assembly2
    rna:1G:4~1533 31~33,35,39,41~42
    rna:3L:1~85 40~41
    rna:4L:13~18 35~38
    rna:14:1~2902 3,11~13,25,83~85
    4037 4wu1:3K
    (3.2Å)
    		 85 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00002D9DE2 RF00005 Escherichia
    coli
    562    		 26037619 Assembly1
    rna:2K:1~85 36~37
    rna:1H:1~2902 18~19,65,80~81,85
    4038 4wu1:3L
    (3.2Å)
    		 85 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00002D9DE2 RF00005 Escherichia
    coli
    562    		 26037619 Assembly2
    rna:2L:1~85 36~37
    rna:14:1~2902 18,65,80,85
    4039 4wu1:4K
    (3.2Å)
    		 11 N/A N/A N/A Thermus
    thermophilus
    HB8
    300852    		 26037619 Assembly1
    rna:13:4~1533 12~13,15~19,21~22
    rna:2K:1~85 15~18
    4040 4www:QA
    (3.1Å)
    		 1533 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E246 RF00177
    RF01959
    RF01960    		 Escherichia
    coli
    str.
    K-12
    substr.
    MG1655
    511145    		 20855725 Assembly1
    rna:RA:1~2903 702,784,899,1407~1409,1418,142
    0,1429,1473~1475,1483~1484,149
    1~1492,1494~1496,1517
    4041 4www:RA
    (3.1Å)
    		 2854 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B0F34 RF02540
    RF02541    		 Escherichia
    coli
    str.
    K-12
    substr.
    MG1655
    511145    		 20855725 Assembly1
    rna:RB:2~119 861~864,915,917~919,958
    rna:QA:2~1534 1689,1700~1704,1832,1837,1846~
    1847,1912~1913,1915,1919~1920,
    1947~1948,1950,1959~1960
    4042 4www:RB
    (3.1Å)
    		 118 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000366A67 RF00001 Escherichia
    coli
    str.
    K-12
    substr.
    MG1655
    511145    		 20855725 Assembly1
    rna:RA:1~2903 78~81,89~90,96~97,99~100
    4043 4www:XA
    (3.1Å)
    		 1530 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E246 RF00177
    RF01959
    RF01960    		 Escherichia
    coli
    str.
    K-12
    substr.
    MG1655
    511145    		 20855725 Assembly2
    rna:YA:1~2903 702,783~784,899,1407~1409,1418
    ,1428~1430,1473~1475,1483~1484
    ,1492~1495,1517
    4044 4www:YA
    (3.1Å)
    		 2841 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B0F34 RF02540
    RF02541    		 Escherichia
    coli
    str.
    K-12
    substr.
    MG1655
    511145    		 20855725 Assembly2
    rna:XA:5~1534 1686,1689,1700~1704,1832,1836~
    1837,1846,1848,1912~1913,1915~
    1916,1919~1920,1947~1948,1959~
    1961
    rna:YB:2~118 861~863,915,917~919,958
    4045 4www:YB
    (3.1Å)
    		 117 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000366A67 RF00001 Escherichia
    coli
    str.
    K-12
    substr.
    MG1655
    511145    		 20855725 Assembly2
    rna:YA:1~2903 78~81,89,96~97,99~100
    4046 4wzd:13
    (3.1Å)
    		 1499 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000868551 RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 26037619 Assembly1
    rna:2K:1~85 790,966,1229~1230,1338~1341,14
    00
    rna:4K:9~24 926,1196,1397,1400~1401,1493,1
    498,1503~1505,1507
    rna:1H:1~2902 702,783~784,899,1407~1409,1418
    ,1429~1430,1443,1473~1475,1483
    ~1484,1492,1494~1496,1517
    4047 4wzd:14
    (3.1Å)
    		 2909 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000868533 RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    HB8
    300852    		 26037619 Assembly2
    rna:1G:4~1532 1689,1701,1703~1704,1832,1836~
    1837,1846,1848,1912~1916,1919~
    1920,1947~1948,1959~1961,2863~
    2864
    rna:2L:1~85 1907~1909,1922~1924,2251~2253,
    2255,2279,2450~2451,2602
    rna:3L:1~85 1851,2112,2169,2394~2395,2421~
    2422
    rna:1J:1M~119 861~864,915~919,958
    4048 4wzd:16
    (3.1Å)
    		 122 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00005AB4A7 RF00001 Thermus
    thermophilus
    HB8
    300852    		 26037619 Assembly1
    rna:1H:1~2902 78~81,89A,96~97,99~100
    4049 4wzd:1G
    (3.1Å)
    		 1503 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000868551 RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 26037619 Assembly2
    rna:2L:1~85 790,966,1229~1230,1338~1340,14
    00
    rna:4L:11~18 926,1401,1498,1503,1505
    rna:14:1~2902 702,783~784,899,1407~1409,1418
    ,1429~1430,1443,1474~1475,1483
    ~1484,1492~1496,1517
    4050 4wzd:1H
    (3.1Å)
    		 2912 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000868533 RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    HB8
    300852    		 26037619 Assembly1
    rna:13:4~1531 1689,1701~1704,1832,1836~1837,
    1846,1848,1912~1913,1915~1916,
    1919~1920,1947~1948,1959~1961,
    2863~2864
    rna:2K:1~85 1908~1909,1922~1924,2251~2253,
    2255,2450~2451,2601~2602
    rna:3K:1~85 1851,2112,2169,2394~2395,2421~
    2422,2432
    rna:16:1M~119 861~863,915,917~919,958
    4051 4wzd:1J
    (3.1Å)
    		 122 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00005AB4A7 RF00001 Thermus
    thermophilus
    HB8
    300852    		 26037619 Assembly2
    rna:14:1~2902 78~81,89A,96~97,99~101
    4052 4wzd:2K
    (3.1Å)
    		 82 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00002D9DE2 RF00005 Escherichia
    coli
    562    		 26037619 Assembly1
    rna:13:4~1531 31~33,35,39,41~42
    rna:3K:1~85 40~41
    rna:4K:9~24 35~38
    rna:1H:1~2902 3,11~13,24~26,83~85
    4053 4wzd:2L
    (3.1Å)
    		 78 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00002D9DE2 RF00005 Escherichia
    coli
    562    		 26037619 Assembly2
    rna:1G:4~1532 31~33,35,39~42
    rna:3L:1~85 40~41
    rna:4L:11~18 35~38
    rna:14:1~2902 2,11~13,25~26,72,83~85
    4054 4wzd:3K
    (3.1Å)
    		 85 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00002D9DE2 RF00005 Escherichia
    coli
    562    		 26037619 Assembly1
    rna:2K:1~85 36~37
    rna:1H:1~2902 18,65,80,85
    4055 4wzd:3L
    (3.1Å)
    		 85 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00002D9DE2 RF00005 Escherichia
    coli
    562    		 26037619 Assembly2
    rna:2L:1~85 36~37
    rna:14:1~2902 18,65,80,85
    4056 4wzd:4K
    (3.1Å)
    		 16 N/A N/A N/A Thermus
    thermophilus
    HB8
    300852    		 26037619 Assembly1
    rna:13:4~1531 12~13,15~19,22~23
    rna:2K:1~85 15~18
    4057 4wzo:13
    (3.3Å)
    		 1497 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E226 RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 26037619 Assembly1
    rna:1K:1~76 530,1054,1493
    rna:2K:1~77 790,966,1229~1230,1338~1341,14
    00
    rna:4K:13~25 926,1196,1397,1400~1401,1492~1
    493,1498,1503,1505,1507
    rna:1H:6~2897 702,783~784,899,1407~1409,1418
    ,1429,1443,1473~1475,1483~1484
    ,1494~1496,1517
    4058 4wzo:14
    (3.3Å)
    		 2877 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000868533 RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    HB8
    300852    		 26037619 Assembly2
    rna:1G:4~1530 1689,1700~1704,1832,1836~1837,
    1846,1848,1912~1913,1915~1916,
    1919~1920,1947~1948,1959~1961,
    2864
    rna:2L:1~77 1907~1909,1923~1924,2251~2253,
    2255,2450~2451,2601~2602
    rna:3L:1~76 1851,1893,2111~2112,2169,2394~
    2395,2421~2422
    rna:1J:1M~119 861~864,915~919,958,1026
    4059 4wzo:16
    (3.3Å)
    		 122 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00005AB4A7 RF00001 Thermus
    thermophilus
    HB8
    300852    		 26037619 Assembly1
    rna:1H:6~2897 78~81,89A,96~97,99~101
    4060 4wzo:1G
    (3.3Å)
    		 1497 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E226 RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 26037619 Assembly2
    rna:2L:1~77 790,966,1229~1230,1338~1341,14
    00
    rna:3L:1~76 1340,1382~1383
    rna:4L:13~21 926,1397,1400~1401,1492~1493,1
    498,1503,1505,1507
    rna:14:5~2895 702,784,899~900,1407~1409,1418
    ,1429,1443,1473~1475,1483~1484
    ,1493~1496,1517
    4061 4wzo:1H
    (3.3Å)
    		 2902 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000868533 RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    HB8
    300852    		 26037619 Assembly1
    rna:13:4~1530 1701~1704,1832,1836~1837,1846,
    1848,1912~1913,1915~1916,1919~
    1920,1947~1949,1959~1961,2863~
    2864
    rna:1K:1~76 881,896~897,1913,2507~2508,255
    3,2555
    rna:2K:1~77 1907~1909,1922~1924,2064,2251~
    2253,2255,2450~2451,2601~2602
    rna:3K:1~76 1851~1852,2112,2168~2169,2394~
    2395,2421~2422
    rna:16:1M~119 861~864,915~919,958
    4062 4wzo:1J
    (3.3Å)
    		 122 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00005AB4A7 RF00001 Thermus
    thermophilus
    HB8
    300852    		 26037619 Assembly2
    rna:14:5~2895 78~81,88,89A,96~97,99~100
    4063 4wzo:1K
    (3.3Å)
    		 70 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000057545F RF00005 Escherichia
    coli
    K-12
    83333    		 26037619 Assembly1
    rna:13:4~1530 35~38
    rna:4K:13~25 36~38
    rna:1H:6~2897 19,38~39,56,58,65,75~76
    4064 4wzo:2K
    (3.3Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000057545F RF00005 Escherichia
    coli
    K-12
    83333    		 26037619 Assembly1
    rna:13:4~1530 31~33,35,39~42
    rna:4K:13~25 35~38
    rna:1H:6~2897 2,11~13,25~26,75~77
    4065 4wzo:2L
    (3.3Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000057545F RF00005 Escherichia
    coli
    K-12
    83333    		 26037619 Assembly2
    rna:1G:4~1530 31~33,35,39~42
    rna:4L:13~21 35~38
    rna:14:5~2895 2~3,11~13,25~26,75~77
    4066 4wzo:3K
    (3.3Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    K-12
    83333    		 26037619 Assembly1
    rna:1H:6~2897 19,56,71,76
    4067 4wzo:3L
    (3.3Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    K-12
    83333    		 26037619 Assembly2
    rna:14:5~2895 17,19,56,71,76
    4068 4wzo:4K
    (3.3Å)
    		 13 N/A N/A N/A Thermus
    thermophilus
    HB8
    300852    		 26037619 Assembly1
    rna:13:4~1530 13,15~20,22~23
    rna:1K:1~76 19~21
    rna:2K:1~77 16~18
    4069 4x4n:D
    (2.953Å)
    		 31 N/A URS000080E2D0 N/A Homo
    sapiens
    9606    		 25640237
    1124    		 Assembly1
    rna:I:1~2 15~17
    4070 4x4r:D
    (3.202Å)
    		 30 N/A URS000080DD43 N/A Homo
    sapiens
    9606    		 25640237
    s37

    1124    		 Assembly2
    rna:H:1~2 15~17
    4071 4x4t:B
    (2.5Å)
    		 34 N/A URS000080E288 N/A Homo
    sapiens
    9606    		 25640237
    1124    		 Assembly1
    rna:I:1~2 15~17,19
    4072 4x4t:D
    (2.5Å)
    		 30 N/A URS000080E288 N/A Homo
    sapiens
    9606    		 25640237
    1124    		 Assembly1
    rna:H:1~2 15~17
    4073 4x4u:B
    (2.7Å)
    		 31 N/A URS000080E308 N/A Homo
    sapiens
    9606    		 25640237
    1124    		 Assembly1
    rna:H:1~2 15~19
    4074 4x62:A
    (3.4492Å)
    		 1512 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DE21 RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 26751643 Assembly1
    rna:a:1~6 530,1196,1397,1492~1493,1544
    rna:b:30~40 530~531,1054,1493
    4075 4x62:b
    (3.4492Å)
    		 11 N/A URS000080DD95 N/A Thermus
    thermophilus
    HB8
    300852    		 26751643 Assembly1
    rna:A:5~1544 34~37
    rna:a:1~6 34~37
    4076 4x64:A
    (3.35Å)
    		 1512 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DE21 RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 26751643 Assembly1
    rna:a:1~6 530,1196,1397,1492~1493,1544
    rna:b:30~40 530~531,1054,1493
    4077 4x64:b
    (3.35Å)
    		 11 N/A URS000080DD95 N/A Thermus
    thermophilus
    HB8
    300852    		 26751643 Assembly1
    rna:A:5~1544 34~37
    rna:a:1~6 34~37
    4078 4x65:A
    (3.345Å)
    		 1512 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DE21 RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 26751643 Assembly1
    rna:a:1~6 530,1196,1397,1492~1493,1544
    rna:b:30~40 530~531,1054,1493
    4079 4x65:b
    (3.345Å)
    		 11 N/A URS000080DD95 N/A Thermus
    thermophilus
    HB8
    300852    		 26751643 Assembly1
    rna:A:5~1544 34~37
    rna:a:1~6 34~37
    4080 4x66:A
    (3.446Å)
    		 1512 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DE21 RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 26751643 Assembly1
    rna:a:1~6 530,1196,1397,1492~1493,1544
    rna:b:30~40 530,1054,1493
    4081 4x66:b
    (3.446Å)
    		 11 N/A URS000080DD95 N/A Thermus
    thermophilus
    HB8
    300852    		 26751643 Assembly1
    rna:A:5~1544 34~37
    rna:a:1~6 34~37
    4082 4xej:A16S
    (3.8Å)
    		 1504 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DD36 RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB27
    262724    		 25652826 Assembly1
    rna:A23S:6~2897 702,783~784,899~900,1407~1409,
    1418,1429,1440C,1473~1475,1483
    ~1485,1493~1496,1517
    rna:AIRE:6151~6193 790,926,966,1229~1230,1338~134
    0,1400~1403,1498
    4083 4xej:A23S
    (3.8Å)
    		 2876 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DEC7 RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    HB27
    262724    		 25652826 Assembly1
    rna:A16S:5~1531 1689,1701~1704,1831~1832,1836~
    1837,1848,1912~1913,1915~1916,
    1919~1920,1947~1948,1959~1961,
    2863
    rna:A5S:1~118 861~863,915~919
    4084 4xej:A5S
    (3.8Å)
    		 119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DE2B RF00001 Thermus
    thermophilus
    HB27
    262724    		 25652826 Assembly1
    rna:A23S:6~2897 78~81,97,99~100
    4085 4xej:AIRE
    (3.8Å)
    		 32 GO:0043022 (F) ribosome binding URS00008116AA RF00458 Plautia
    stali
    intestine
    virus
    64698    		 25652826 Assembly1
    rna:A16S:5~1531 6159~6161,6163,6167~6168,6170~
    6171,6190~6192
    4086 4xej:B16S
    (3.8Å)
    		 1504 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DD36 RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB27
    262724    		 25652826 Assembly2
    rna:B23S:6~2897 702,783~784,899,1407~1409,1418
    ,1429,1440C,1473~1475,1483~148
    4,1492~1496,1517
    rna:BIRE:6151~6193 790,926,966,1229~1230,1338~134
    0,1400~1403,1498,1505
    4087 4xej:B23S
    (3.8Å)
    		 2876 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DEC7 RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    HB27
    262724    		 25652826 Assembly2
    rna:B16S:5~1531 1689,1700~1704,1831,1836~1837,
    1846,1848,1912~1913,1916,1919~
    1920,1947~1948,1958~1961,2863~
    2864
    rna:B5S:1~118 861~864,917~919
    4088 4xej:B5S
    (3.8Å)
    		 119 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DE2B RF00001 Thermus
    thermophilus
    HB27
    262724    		 25652826 Assembly2
    rna:B23S:6~2897 78~81,97,99~101
    4089 4xej:BIRE
    (3.8Å)
    		 32 GO:0043022 (F) ribosome binding URS00008116AA RF00458 Plautia
    stali
    intestine
    virus
    64698    		 25652826 Assembly2
    rna:B16S:5~1531 6158~6161,6163,6167~6168,6170~
    6171,6190~6193
    4090 4xw0:A
    (1.81Å)
    		 10 N/A URS00008FED46 N/A Homo
    sapiens
    9606    		 26543073 Assembly1
    rna:B:1~10 1~7
    4091 4xw0:B
    (1.81Å)
    		 10 N/A URS00008FED46 N/A Homo
    sapiens
    9606    		 26543073 Assembly1
    rna:A:1~10 1~7
    4092 4y1i:A
    (2.85Å)
    		 100 N/A URS00008116C1 N/A Lactococcus
    lactis
    subsp.
    lactis
    1360    		 25794619 Assembly1
    rna:B:3~102 47,60
    rna:A-2:3~102 42~43
    4093 4y1i:B
    (2.85Å)
    		 100 N/A URS00008116C1 N/A Lactococcus
    lactis
    subsp.
    lactis
    1360    		 25794619 Assembly1
    rna:A:3~102 43,95
    4094 4y1j:B
    (2.24Å)
    		 100 N/A URS00008116BC N/A Lactococcus
    lactis
    subsp.
    lactis
    1360    		 25794619 Assembly1
    rna:A:3~102 85~86
    4095 4y4o:1A
    (2.3Å)
    		 2872 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001698E8 RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    HB8
    300852    		 25775268 Assembly1
    rna:1B:1~120 908~911,961,963~965,1003
    rna:1a:4~1533 1736,1747~1751,1863,1867~1868,
    1877,1879,1917,1934~1938,1941~
    1942,1969~1970,1972,1981~1983,
    2873~2874
    4096 4y4o:1B
    (2.3Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DEE8 RF00001 Thermus
    thermophilus
    HB8
    300852    		 25775268 Assembly1
    rna:1A:6~2906 78~81,90,97~102
    4097 4y4o:1a
    (2.3Å)
    		 1500 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DFED RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 25775268 Assembly1
    rna:1A:6~2906 702,784,899~900,1407~1409,1418
    ,1420,1429,1442A,1473~1475,148
    3~1484,1491~1496,1517
    4098 4y4o:2A
    (2.3Å)
    		 2867 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001698E8 RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    HB8
    300852    		 25775268 Assembly2
    rna:2B:1~120 861~864,915~919,958
    rna:2a:4~1533 1689,1700~1701,1703~1704,1832,
    1836~1837,1846,1848,1912~1916,
    1919~1920,1947~1948,1950,1959~
    1961,2863~2864
    4099 4y4o:2B
    (2.3Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DEE8 RF00001 Thermus
    thermophilus
    HB8
    300852    		 25775268 Assembly2
    rna:2A:6~2897 78~81,90,97~102
    4100 4y4o:2a
    (2.3Å)
    		 1504 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DFED RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 25775268 Assembly2
    rna:2A:6~2897 702,783~784,899,1407~1409,1418
    ,1420,1429,1442A,1474~1475,148
    3~1484,1491~1496,1517
    << < 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 > >>
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    Reference:
  • Chengxin Zhang, Lydia Freddolino (2024) "FURNA: a database for function annotations of RNA structures," PLOS Biology 22(7): e3002476.