SEQ2FUN

FURNA
Download all results in tab-seperated text for 14210 RNAs.
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  • Hover over Ligand to view the name of the ligand and the ligand-binding nucleotides on the RNA.

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    # PDB
    (Resolution)    		 Length EC number
    & GO term     		RNAcentral Rfam Taxon PubMed ATtRACT
    motif     		Ligand &
    binding nucleotides
    4401 5e7k:3L
    (3.2Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000042DDAB RF00005 Escherichia
    coli
    562    		 26791911 Assembly2
    rna:1G:4~1536 34,38
    rna:14:1~2902 3~4,17,19,56,70~71,76
    4402 5e7k:4K
    (3.2Å)
    		 19 N/A N/A N/A Escherichia
    coli
    562    		 26791911 Assembly1
    rna:13:1~1536 9~12,15~21,23
    rna:1K:1~76 19~21
    rna:2K:1~77 16~18
    4403 5e7k:4L
    (3.2Å)
    		 18 N/A N/A N/A Escherichia
    coli
    562    		 26791911 Assembly2
    rna:1G:4~1536 9~13,15~21,23
    rna:1L:1~76 19~22
    rna:2L:1~77 16~18
    4404 5e81:13
    (2.95Å)
    		 1496 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00008FED22 RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 26791911 Assembly1
    rna:1K:1~76 530~531,1054,1493
    rna:2K:1~77 790,966,1229,1338~1340,1400
    rna:4K:6~26 530,693,926,1196,1397,1400~140
    1,1492~1493,1498,1503,1505,150
    7,1534,1536
    rna:1H:5~2898 702,783~784,899,1407~1409,1418
    ,1429,1443,1474~1475,1483~1484
    ,1494~1496,1517
    4405 5e81:14
    (2.95Å)
    		 2855 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000868533 RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    HB8
    300852    		 26791911 Assembly2
    rna:1G:4~1535 1689,1700~1704,1832,1836~1837,
    1846,1848,1912~1913,1915~1916,
    1919~1920,1947~1948,1959~1960,
    2863~2864
    rna:1L:1~76 1913,2482,2506~2507,2553~2555,
    2583~2585,2602
    rna:2L:1~77 1907~1909,1922~1924,2251~2253,
    2255,2450~2451,2601~2602
    rna:3L:1~76 1850~1851,1893,2114,2170,2394~
    2395,2421~2422
    rna:1J:1M~119 861~864,915~919,958
    4406 5e81:16
    (2.95Å)
    		 122 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00005AB4A7 RF00001 Thermus
    thermophilus
    HB8
    300852    		 26791911 Assembly1
    rna:1H:5~2898 78~81,89A,96~97,99~100
    4407 5e81:1G
    (2.95Å)
    		 1506 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00008FED22 RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 26791911 Assembly2
    rna:1L:1~76 530,1054,1493
    rna:2L:1~77 790,966,1229~1230,1338~1340,14
    00
    rna:3L:1~76 694,1382
    rna:4L:7~25 530,693,926,1196,1397,1400~140
    1,1492~1493,1498,1503,1505,150
    7,1532,1534~1535
    rna:14:6~2902 702,784,899~900,1407~1409,1418
    ,1429,1443,1473~1475,1483~1484
    ,1493~1496,1517
    4408 5e81:1H
    (2.95Å)
    		 2885 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000868533 RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    HB8
    300852    		 26791911 Assembly1
    rna:13:1~1536 1689,1700~1701,1703~1704,1832,
    1836~1837,1846,1848,1912~1913,
    1915~1916,1919~1920,1947~1948,
    1959~1961,2863~2864
    rna:1K:1~76 897,1913,2482,2506~2507,2553,2
    555,2583~2585,2602
    rna:2K:1~77 1907~1909,1922~1924,2251~2253,
    2255,2450~2451,2601~2602
    rna:3K:1~76 1851,1893,2112,2169,2394~2395,
    2421~2422,2432
    rna:16:1M~119 861~863,915,917~919,958
    4409 5e81:1J
    (2.95Å)
    		 122 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00005AB4A7 RF00001 Thermus
    thermophilus
    HB8
    300852    		 26791911 Assembly2
    rna:14:6~2902 78~81,89A,96~97,99~100
    4410 5e81:1K
    (2.95Å)
    		 72 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000042DDAB RF00005 Escherichia
    coli
    562    		 26791911 Assembly1
    rna:13:1~1536 34~37
    rna:4K:6~26 34~37
    rna:1H:5~2898 18,37~38,63,74~76
    4411 5e81:1L
    (2.95Å)
    		 69 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000042DDAB RF00005 Escherichia
    coli
    562    		 26791911 Assembly2
    rna:1G:4~1535 34~37
    rna:4L:7~25 34~37
    rna:14:6~2902 37~38,63,74~76
    4412 5e81:2K
    (2.95Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000057545F RF00005 Thermus
    thermophilus
    HB8
    300852    		 26791911 Assembly1
    rna:13:1~1536 30~33,35,39,41~42
    rna:4K:6~26 35~38
    rna:1H:5~2898 2,11~13,25~26,75~77
    4413 5e81:2L
    (2.95Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000057545F RF00005 Thermus
    thermophilus
    HB8
    300852    		 26791911 Assembly2
    rna:1G:4~1535 31~33,35,39~42
    rna:4L:7~25 35~38
    rna:14:6~2902 2~3,11~13,25~26,75~77
    4414 5e81:3K
    (2.95Å)
    		 70 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000042DDAB RF00005 Thermus
    thermophilus
    HB8
    300852    		 26791911 Assembly1
    rna:4K:6~26 35~36
    rna:1H:5~2898 2,56,70~71,76
    4415 5e81:3L
    (2.95Å)
    		 72 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000042DDAB RF00005 Thermus
    thermophilus
    HB8
    300852    		 26791911 Assembly2
    rna:1G:4~1535 34,38~39
    rna:14:6~2902 3~4,56,70~71,76
    4416 5e81:4K
    (2.95Å)
    		 21 N/A N/A N/A Escherichia
    coli
    562    		 26791911 Assembly1
    rna:13:1~1536 10~13,15~21,23
    rna:1K:1~76 19~21
    rna:2K:1~77 16~18
    4417 5e81:4L
    (2.95Å)
    		 19 N/A N/A N/A Escherichia
    coli
    562    		 26791911 Assembly2
    rna:1G:4~1535 9~13,15~23
    rna:1L:1~76 19~21
    rna:2L:1~77 16~18
    4418 5eao:A
    (2.988Å)
    		 48 EC:3.1.-.-
    GO:0004540 (F) RNA nuclease activity    		 URS0000868531 RF00008 synthetic
    construct
    32630    		 26551631
    26398724    		 Assembly1
    rna:B:1~20 7~9,11~15,18~19,21,39,42~48
    4419 5eao:B
    (2.988Å)
    		 20 N/A URS00008FED4C N/A synthetic
    construct
    32630    		 26551631
    26398724    		 Assembly1
    rna:A:1~48 1~13
    4420 5eaq:A
    (3.201Å)
    		 48 EC:3.1.-.-
    GO:0004540 (F) RNA nuclease activity    		 URS0000868531 RF00008 synthetic
    construct
    32630    		 26551631
    26398724    		 Assembly1
    rna:B:1~20 7~9,11~15,18~19,21,39,42~47
    4421 5eaq:B
    (3.201Å)
    		 20 N/A URS00008FED4C N/A synthetic
    construct
    32630    		 26551631
    26398724    		 Assembly1
    rna:A:1~48 1~13
    4422 5ed1:B
    (2.77Å)
    		 23 N/A URS0000A76387 N/A Saccharomyces
    cerevisiae
    4932    		 27065196 Assembly1
    rna:C:1~23 1~11,13~23
    4423 5ed1:C
    (2.77Å)
    		 23 N/A URS0000A763A5 N/A Saccharomyces
    cerevisiae
    4932    		 27065196 Assembly1
    rna:B:1~23 1~23
    4424 5ed2:B
    (2.95Å)
    		 23 N/A URS0000A7634A N/A Homo
    sapiens
    9606    		 27065196 Assembly1
    rna:C:1~23 1~12,14~23
    4425 5ed2:C
    (2.95Å)
    		 23 N/A URS0000A7638C N/A Homo
    sapiens
    9606    		 27065196
    126    		 Assembly1
    rna:B:1~23 1~23
    4426 5ed2:E
    (2.95Å)
    		 23 N/A URS0000A7634A N/A Homo
    sapiens
    9606    		 27065196 Assembly2
    rna:F:1~23 1~12,14~23
    4427 5ed2:F
    (2.95Å)
    		 23 N/A URS0000A7638C N/A Homo
    sapiens
    9606    		 27065196
    126    		 Assembly2
    rna:E:1~23 1~23
    4428 5el4:13
    (3.15Å)
    		 1496 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000868551 RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 26791911 Assembly1
    rna:1K:1~76 530~531,1054,1493
    rna:2K:1~77 790,966,1229,1338~1340,1400
    rna:4K:6~25 530,926,1196,1397,1400~1401,14
    92~1493,1498,1503,1505,1507,15
    34,1536
    rna:1H:5~2898 702,783~784,899,1407~1409,1418
    ,1429,1443,1473~1475,1483~1484
    ,1494~1496,1517
    4429 5el4:14
    (3.15Å)
    		 2861 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000868533 RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    HB8
    300852    		 26791911 Assembly2
    rna:1G:4~1536 1689,1700~1701,1703~1704,1832,
    1836~1837,1846,1848,1912~1913,
    1915~1916,1919~1920,1947~1949,
    1959~1961,2863~2864
    rna:1L:1~76 880,1913,1916,2483,2506~2507,2
    553,2555,2583~2585,2602
    rna:2L:1~77 1908~1909,1922~1924,2251~2253,
    2255,2450~2451,2601~2602
    rna:3L:1~76 1850~1851,1893,2113~2114,2394~
    2395,2421~2422,2432
    rna:1J:1M~119 861~864,915~919,958
    4430 5el4:16
    (3.15Å)
    		 122 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00005AB4A7 RF00001 Thermus
    thermophilus
    HB8
    300852    		 26791911 Assembly1
    rna:1H:5~2898 78~81,89A,96~97,99~101
    4431 5el4:1G
    (3.15Å)
    		 1507 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000868551 RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 26791911 Assembly2
    rna:1L:1~76 530,1054,1493
    rna:2L:1~77 790,1229~1230,1338~1341,1400
    rna:3L:1~76 694,937,1382~1383
    rna:4L:6~22 693,926,1196,1400~1402,1492~14
    93,1498,1503,1505,1507,1532,15
    34~1536
    rna:14:1~2902 702,783~784,899,1407~1409,1418
    ,1429~1430,1443,1474~1475,1483
    ~1484,1493~1496,1517
    4432 5el4:1H
    (3.15Å)
    		 2833 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000868533 RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    HB8
    300852    		 26791911 Assembly1
    rna:13:1~1536 1689,1701~1704,1832,1836~1837,
    1846,1848,1912~1913,1915~1916,
    1919~1920,1947~1949,1959~1961,
    2863~2864
    rna:1K:1~76 881,897,1913,2506~2508,2553,25
    55,2573,2583~2585,2602
    rna:2K:1~77 1907~1909,1922~1924,2251~2253,
    2255,2450~2451,2601~2602
    rna:3K:1~76 1851~1852,1892~1893,2112,2168~
    2169,2394~2395,2421~2422
    rna:16:1M~119 861~864,915,917~919,958
    4433 5el4:1J
    (3.15Å)
    		 122 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00005AB4A7 RF00001 Thermus
    thermophilus
    HB8
    300852    		 26791911 Assembly2
    rna:14:1~2902 78~81,89A,96~97,99~100
    4434 5el4:1K
    (3.15Å)
    		 69 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000042DDAB RF00005 Escherichia
    coli
    K-12
    83333    		 26791911 Assembly1
    rna:13:1~1536 34~37
    rna:4K:6~25 34~37
    rna:1H:5~2898 18,37~38,56,74~76
    4435 5el4:1L
    (3.15Å)
    		 74 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000042DDAB RF00005 Escherichia
    coli
    K-12
    83333    		 26791911 Assembly2
    rna:1G:4~1536 34~35,37
    rna:4L:6~22 34,37
    rna:14:1~2902 12,19,37,63,74~76
    4436 5el4:2K
    (3.15Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    K-12
    83333    		 26791911 Assembly1
    rna:13:1~1536 31~33,35,39,41~42
    rna:4K:6~25 35~38
    rna:1H:5~2898 2,11~13,25~26,75~77
    4437 5el4:2L
    (3.15Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    K-12
    83333    		 26791911 Assembly2
    rna:1G:4~1536 31~33,35,39~42
    rna:4L:6~22 35~38
    rna:14:1~2902 2,11~13,25~26,75~77
    4438 5el4:3K
    (3.15Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000042DDAB RF00005 Escherichia
    coli
    K-12
    83333    		 26791911 Assembly1
    rna:4K:6~25 35~36
    rna:1H:5~2898 2,19,56,70~71,76
    4439 5el4:3L
    (3.15Å)
    		 74 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000042DDAB RF00005 Escherichia
    coli
    K-12
    83333    		 26791911 Assembly2
    rna:1G:4~1536 34,38
    rna:14:1~2902 2~4,19,56,70~71,76
    4440 5el4:4K
    (3.15Å)
    		 20 N/A N/A N/A Escherichia
    coli
    562    		 26791911 Assembly1
    rna:13:1~1536 9,11~13,15~21,23
    rna:1K:1~76 19~22
    rna:2K:1~77 16~18
    4441 5el4:4L
    (3.15Å)
    		 17 N/A N/A N/A Escherichia
    coli
    562    		 26791911 Assembly2
    rna:1G:4~1536 9~13,15~20,22
    rna:1L:1~76 19~21
    rna:2L:1~77 16~18
    rna:3L:1~76 13~14
    4442 5el5:13
    (3.15Å)
    		 1493 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E226 RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 26791911 Assembly1
    rna:1K:1~76 530,1054,1493
    rna:2K:1~77 790,966,1229~1230,1338~1341,14
    00
    rna:4K:6~25 530,926,1196,1397,1400~1401,14
    92~1493,1498,1503,1505,1533~15
    34
    rna:1H:5~2898 702,783~784,899,1407~1409,1418
    ,1429~1430,1443,1473~1475,1483
    ~1484,1494~1496,1517
    4443 5el5:14
    (3.15Å)
    		 2861 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E23D RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    HB8
    300852    		 26791911 Assembly2
    rna:1G:1~1536 1689,1700~1701,1703~1704,1832,
    1836~1837,1846,1848,1912~1913,
    1915~1916,1919~1920,1947~1949,
    1959~1961,2864
    rna:1L:1~76 880,897~898,1913,2482~2483,250
    6~2507,2555,2583~2585
    rna:2L:1~77 1907~1909,1922~1924,2251~2253,
    2255,2450~2451,2601~2602
    rna:3L:1~76 1851,2110~2111,2113~2114,2170,
    2394~2395,2421~2422
    rna:1J:1M~119 861~863,915~919,958
    4444 5el5:16
    (3.15Å)
    		 122 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00005AB4A7 RF00001 Thermus
    thermophilus
    HB8
    300852    		 26791911 Assembly1
    rna:1H:5~2898 78~81,89A,96~97,99~100
    4445 5el5:1G
    (3.15Å)
    		 1496 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E226 RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 26791911 Assembly2
    rna:1L:1~76 530,1054,1493
    rna:2L:1~77 790,966,1229~1230,1338~1340,14
    00
    rna:4L:6~22 530,693,926,1400~1402,1492~149
    3,1498,1503,1505~1507,1532,153
    4~1536
    rna:14:1~2902 702,784,899~900,1407~1409,1418
    ,1429,1443,1474~1475,1483~1484
    ,1493~1495,1517
    4446 5el5:1H
    (3.15Å)
    		 2830 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E23D RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    HB8
    300852    		 26791911 Assembly1
    rna:13:1~1534 1689,1701~1704,1832,1836~1837,
    1846,1848,1912~1913,1915~1916,
    1919~1920,1947~1949,1959~1961,
    2863~2864
    rna:1K:1~76 881,897,1913,2482,2506~2508,25
    53,2555,2573,2583~2585,2602
    rna:2K:1~77 1907~1909,1922~1924,2251~2253,
    2255,2450~2451,2601~2602
    rna:3K:1~76 1851,2112,2169~2170,2394~2395,
    2421~2422
    rna:16:1M~119 861~864,915,917~919,958
    4447 5el5:1J
    (3.15Å)
    		 122 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00005AB4A7 RF00001 Thermus
    thermophilus
    HB8
    300852    		 26791911 Assembly2
    rna:14:1~2902 78~81,89A,96~97,99~100
    4448 5el5:1K
    (3.15Å)
    		 69 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000042DDAB RF00005 Escherichia
    coli
    K-12
    83333    		 26791911 Assembly1
    rna:13:1~1534 34~37
    rna:4K:6~25 34~37
    rna:1H:5~2898 18,37~38,56,63,74~76
    4449 5el5:1L
    (3.15Å)
    		 74 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000042DDAB RF00005 Escherichia
    coli
    K-12
    83333    		 26791911 Assembly2
    rna:1G:1~1536 34~35,37
    rna:4L:6~22 34~37
    rna:14:1~2902 18~19,37,56,63,74~76
    4450 5el5:2K
    (3.15Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000057545F RF00005 Escherichia
    coli
    K-12
    83333    		 26791911 Assembly1
    rna:13:1~1534 31~33,35,39~42
    rna:3K:1~76 40~41
    rna:4K:6~25 35~38
    rna:1H:5~2898 2~3,11~13,25~26,75~77
    4451 5el5:2L
    (3.15Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000057545F RF00005 Escherichia
    coli
    K-12
    83333    		 26791911 Assembly2
    rna:1G:1~1536 31~32,35,41~42
    rna:4L:6~22 35~38
    rna:14:1~2902 2~3,11~13,25~26,75~77
    4452 5el5:3K
    (3.15Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000042DDAB RF00005 Escherichia
    coli
    K-12
    83333    		 26791911 Assembly1
    rna:4K:6~25 34~35
    rna:1H:5~2898 17,19,56~57,71~72,76
    4453 5el5:3L
    (3.15Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000042DDAB RF00005 Escherichia
    coli
    K-12
    83333    		 26791911 Assembly2
    rna:4L:6~22 35~36
    rna:14:1~2902 17,19,56,71,76
    4454 5el5:4K
    (3.15Å)
    		 20 N/A N/A N/A Escherichia
    coli
    K-12
    83333    		 26791911 Assembly1
    rna:13:1~1534 9~12,15~22,24
    rna:1K:1~76 19~21
    rna:2K:1~77 16~18
    rna:3K:1~76 13~15
    4455 5el5:4L
    (3.15Å)
    		 17 N/A N/A N/A Escherichia
    coli
    K-12
    83333    		 26791911 Assembly2
    rna:1G:1~1536 8~10,12~13,15~22
    rna:1L:1~76 19~21
    rna:2L:1~77 16~18
    4456 5el6:13
    (3.1Å)
    		 1496 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E226 RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 26791911 Assembly1
    rna:1K:1~76 530~531,1054,1493
    rna:2K:1~77 790,966,1229~1230,1338~1340,14
    00
    rna:3K:1~76 936,1382~1383
    rna:4K:6~25 530,926,1196,1397,1400~1401,14
    92~1493,1498,1503~1505,1507,15
    31,1534~1536
    rna:1H:5~2898 702,783~784,899,1407~1409,1418
    ,1429,1443,1473~1475,1483~1485
    ,1494~1496,1517
    4457 5el6:14
    (3.1Å)
    		 2861 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E23D RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    HB8
    300852    		 26791911 Assembly2
    rna:1G:4~1536 1689,1700~1701,1703~1704,1832,
    1836~1837,1846,1848,1912~1913,
    1915~1916,1919~1920,1947~1949,
    1959~1961,2863~2864
    rna:1L:1~76 880,1913,2482,2506~2507,2553,2
    555,2573,2583~2585,2602
    rna:2L:1~77 1907~1909,1922~1924,2251~2253,
    2255,2450~2451,2601~2602
    rna:3L:1~76 1850~1851,1893,2111,2113~2114,
    2170,2394~2395,2421~2422,2432
    rna:1J:1M~119 861~864,915,917~919,958
    4458 5el6:16
    (3.1Å)
    		 122 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00005AB4A7 RF00001 Thermus
    thermophilus
    HB8
    300852    		 26791911 Assembly1
    rna:1H:5~2898 78~81,89A,96~97,99~101
    4459 5el6:1G
    (3.1Å)
    		 1507 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E226 RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 26791911 Assembly2
    rna:1L:1~76 530,1054,1493
    rna:2L:1~77 790,966,1229~1230,1338~1341,14
    00
    rna:3L:1~76 694,936,1382~1383
    rna:4L:6~23 530,926,1397,1400~1402,1492~14
    93,1498,1503,1507,1534~1536
    rna:14:1~2902 702,784,899~900,1407~1409,1418
    ,1429,1443,1474~1475,1483~1485
    ,1493~1496,1517
    4460 5el6:1H
    (3.1Å)
    		 2833 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E23D RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    HB8
    300852    		 26791911 Assembly1
    rna:13:1~1536 1689,1700~1704,1832,1836~1837,
    1846,1848,1912~1913,1915~1916,
    1919~1920,1947~1948,1959~1961,
    2863~2864
    rna:1K:1~76 881,897,1913,2482,2506~2508,25
    53,2555,2573,2583~2585,2602
    rna:2K:1~77 1907~1909,1922~1924,2251~2253,
    2255,2450~2451,2601~2602
    rna:3K:1~76 1850~1852,1893,2112,2169,2394~
    2395,2421~2422,2432
    rna:16:1M~119 861~864,915,917~919,958
    4461 5el6:1J
    (3.1Å)
    		 122 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00005AB4A7 RF00001 Thermus
    thermophilus
    HB8
    300852    		 26791911 Assembly2
    rna:14:1~2902 78~81,89A,96~97,99~100
    4462 5el6:1K
    (3.1Å)
    		 69 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000042DDAB RF00005 Escherichia
    coli
    K-12
    83333    		 26791911 Assembly1
    rna:13:1~1536 34~37
    rna:4K:6~25 34~37
    rna:1H:5~2898 18,37~38,56,63,74~76
    4463 5el6:1L
    (3.1Å)
    		 73 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000042DDAB RF00005 Escherichia
    coli
    K-12
    83333    		 26791911 Assembly2
    rna:1G:4~1536 34~37
    rna:4L:6~23 34~37
    rna:14:1~2902 19,38,63,74~76
    4464 5el6:2K
    (3.1Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000057545F RF00005 Escherichia
    coli
    K-12
    83333    		 26791911 Assembly1
    rna:13:1~1536 31~33,35,39,41~42
    rna:4K:6~25 35~38
    rna:1H:5~2898 11~13,25~26,75~77
    4465 5el6:2L
    (3.1Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000057545F RF00005 Escherichia
    coli
    K-12
    83333    		 26791911 Assembly2
    rna:1G:4~1536 31~33,35,39~42
    rna:4L:6~23 35~38
    rna:14:1~2902 2~3,12~13,25~26,75~77
    4466 5el6:3K
    (3.1Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000042DDAB RF00005 Escherichia
    coli
    K-12
    83333    		 26791911 Assembly1
    rna:4K:6~25 35~36
    rna:1H:5~2898 2,4,19,56,70~71,76
    4467 5el6:3L
    (3.1Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000042DDAB RF00005 Escherichia
    coli
    K-12
    83333    		 26791911 Assembly2
    rna:1G:4~1536 34,38
    rna:14:1~2902 3~4,17,19,56,70~71,76
    4468 5el6:4K
    (3.1Å)
    		 20 N/A N/A N/A Escherichia
    coli
    K-12
    83333    		 26791911 Assembly1
    rna:13:1~1536 9~12,15~22,24
    rna:1K:1~76 19~21
    rna:2K:1~77 16~18
    rna:3K:1~76 13~14
    4469 5el6:4L
    (3.1Å)
    		 18 N/A N/A N/A Escherichia
    coli
    K-12
    83333    		 26791911 Assembly2
    rna:1G:4~1536 8~12,15~22
    rna:1L:1~76 19~21
    rna:2L:1~77 16~18
    rna:3L:1~76 13~14
    4470 5el7:13
    (3.15Å)
    		 1496 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000868551 RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 26791911 Assembly1
    rna:1K:1~76 530,1054,1493
    rna:2K:1~77 790,966,1229~1230,1338~1340,14
    00
    rna:4K:6~25 530,926,1196,1397,1400~1401,14
    92~1493,1498,1503,1505,1507,15
    34~1536
    rna:1H:5~2898 702,783~784,899,1407~1409,1418
    ,1429,1443,1473~1475,1483~1484
    ,1494~1495,1517
    4471 5el7:14
    (3.15Å)
    		 2861 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000868533 RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    HB8
    300852    		 26791911 Assembly2
    rna:1G:4~1536 1689,1700~1704,1832,1836~1837,
    1846,1848,1912~1913,1915~1916,
    1919~1920,1947~1948,1959~1961,
    2863~2864
    rna:1L:1~76 880,1913,2482,2506~2507,2553,2
    555,2583~2585,2602
    rna:2L:1~77 1907~1909,1922~1924,2251~2253,
    2255,2450~2451,2601~2602
    rna:3L:1~76 1851,2111,2113~2114,2170,2394~
    2395,2421~2422,2432
    rna:1J:1M~119 861~864,915,917~919,958
    4472 5el7:16
    (3.15Å)
    		 122 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00005AB4A7 RF00001 Thermus
    thermophilus
    HB8
    300852    		 26791911 Assembly1
    rna:1H:5~2898 78~81,89A,96~97,99~100
    4473 5el7:1G
    (3.15Å)
    		 1506 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000868551 RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 26791911 Assembly2
    rna:1L:1~76 530,1054,1493
    rna:2L:1~77 790,966,1229,1338~1340,1400
    rna:4L:6~24 530,693,926,1196,1400~1402,149
    2~1493,1498,1503,1505,1507,153
    2,1534~1536
    rna:14:1~2902 702,784,899,1407~1409,1418,142
    9,1443,1473~1475,1483~1484,149
    3~1496,1517
    4474 5el7:1H
    (3.15Å)
    		 2833 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000868533 RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    HB8
    300852    		 26791911 Assembly1
    rna:13:1~1536 1689,1700~1704,1832,1836~1837,
    1846,1848,1912~1913,1915~1916,
    1919~1920,1947~1949,1959~1961,
    2863~2864
    rna:1K:1~76 881,897~898,1913,2482~2483,250
    6~2507,2553~2555,2583~2585,260
    2
    rna:2K:1~77 1907~1909,1922~1924,2251~2253,
    2255,2450~2451,2601~2602
    rna:3K:1~76 1851,2112,2169,2394~2395,2421~
    2422,2432
    rna:16:1M~119 861~863,915,917~919,958
    4475 5el7:1J
    (3.15Å)
    		 122 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00005AB4A7 RF00001 Thermus
    thermophilus
    HB8
    300852    		 26791911 Assembly2
    rna:14:1~2902 78~81,89A,97,99~100
    4476 5el7:1K
    (3.15Å)
    		 69 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000042DDAB RF00005 Escherichia
    coli
    K-12
    83333    		 26791911 Assembly1
    rna:13:1~1536 34~37
    rna:4K:6~25 34~37
    rna:1H:5~2898 18,37~38,56,63,74~76
    4477 5el7:1L
    (3.15Å)
    		 73 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000042DDAB RF00005 Escherichia
    coli
    K-12
    83333    		 26791911 Assembly2
    rna:1G:4~1536 34~37
    rna:4L:6~24 34~37
    rna:14:1~2902 19,37~38,63,74~76
    4478 5el7:2K
    (3.15Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000057545F RF00005 Escherichia
    coli
    K-12
    83333    		 26791911 Assembly1
    rna:13:1~1536 31~33,35,41~42
    rna:3K:1~76 40~41
    rna:4K:6~25 35~38
    rna:1H:5~2898 2,11~13,25~26,75~77
    4479 5el7:2L
    (3.15Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000057545F RF00005 Escherichia
    coli
    K-12
    83333    		 26791911 Assembly2
    rna:1G:4~1536 31~33,35,39,41~42
    rna:4L:6~24 35~38
    rna:14:1~2902 2~3,11~12,25~26,75~77
    4480 5el7:3K
    (3.15Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000042DDAB RF00005 Escherichia
    coli
    K-12
    83333    		 26791911 Assembly1
    rna:4K:6~25 34~35
    rna:1H:5~2898 19,56,71,76
    4481 5el7:3L
    (3.15Å)
    		 75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000042DDAB RF00005 Escherichia
    coli
    K-12
    83333    		 26791911 Assembly2
    rna:4L:6~24 34~35
    rna:14:1~2902 4,17,19,56,71,76
    4482 5el7:4K
    (3.15Å)
    		 20 N/A N/A N/A Escherichia
    coli
    562    		 26791911 Assembly1
    rna:13:1~1536 9~12,15~23
    rna:1K:1~76 19,21
    rna:2K:1~77 16~18
    rna:3K:1~76 13~15
    4483 5el7:4L
    (3.15Å)
    		 19 N/A N/A N/A Escherichia
    coli
    562    		 26791911 Assembly2
    rna:1G:4~1536 8~13,15~21,23
    rna:1L:1~76 19~22
    rna:2L:1~77 16~18
    4484 5ew4:A
    (1.47Å)
    		 20 N/A URS00008FED27 N/A Homo
    sapiens
    9606    		 26878348
    1238    		 Assembly1
    rna:B:1~21 4~21
    4485 5ew4:B
    (1.47Å)
    		 21 N/A URS00008FED27 N/A Homo
    sapiens
    9606    		 26878348
    1238    		 Assembly1
    rna:A:2~21 2,4~21
    4486 5ew7:A
    (1.75Å)
    		 20 N/A URS00008FED27 N/A Homo
    sapiens
    9606    		 26878348
    1238    		 Assembly1
    rna:B:1~21 5~21
    4487 5ew7:B
    (1.75Å)
    		 21 N/A URS00008FED27 N/A Homo
    sapiens
    9606    		 26878348
    1238    		 Assembly1
    rna:A:2~21 5~21
    4488 5f8g:B
    (2.78Å)
    		 12 N/A URS000080DEB1 N/A synthetic
    construct
    32630    		 27339134 Assembly1
    rna:C:692~701 601~610
    4489 5f8g:C
    (2.78Å)
    		 10 N/A URS000080DFB4 N/A synthetic
    construct
    32630    		 27339134 Assembly1
    rna:B:599~610 692~701
    4490 5f8h:B
    (2.45Å)
    		 12 N/A URS000080DEB1 N/A synthetic
    construct
    32630    		 27339134 Assembly1
    rna:C:692~701 601~610
    4491 5f8h:C
    (2.45Å)
    		 10 N/A URS000080DFB4 N/A synthetic
    construct
    32630    		 27339134 Assembly1
    rna:B:599~610 692~701
    4492 5f8i:B
    (2.503Å)
    		 12 N/A URS000080DEB1 N/A synthetic
    construct
    32630    		 27339134 Assembly1
    rna:C:692~701 601~610
    4493 5f8i:C
    (2.503Å)
    		 10 N/A URS000080DFB4 N/A synthetic
    construct
    32630    		 27339134 Assembly1
    rna:B:599~610 692~701
    4494 5f8j:B
    (2.675Å)
    		 12 N/A URS000080DEB1 N/A synthetic
    construct
    32630    		 27339134 Assembly1
    rna:C:692~702 600~610
    4495 5f8j:C
    (2.675Å)
    		 11 N/A URS000080DFD6 N/A synthetic
    construct
    32630    		 27339134 Assembly1
    rna:B:599~610 692~702
    4496 5f8k:1A
    (2.8Å)
    		 2872 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001698E8 RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    HB8
    300852    		 26792896 Assembly1
    rna:1B:1~120 908~910,961,963~965,1003
    rna:1a:4~1533 1736,1747~1751,1863,1867~1868,
    1877,1879,1934~1935,1937~1938,
    1941~1942,1969~1970,1981~1983,
    2873~2874
    rna:1x:2~76 1929~1931,1944~1946,2263~2265,
    2267,2462~2463,2613~2614
    4497 5f8k:1B
    (2.8Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DFF2 RF00001 Thermus
    thermophilus
    HB8
    300852    		 26792896 Assembly1
    rna:1A:6~2906 78~81,90,97~98,100~101
    4498 5f8k:1a
    (2.8Å)
    		 1500 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E378 RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 26792896 Assembly1
    rna:1A:6~2906 702,783~784,899~900,1407~1409,
    1418,1429,1442A,1473~1475,1483
    ~1485,1492~1496,1517
    rna:1v:16~18 926,1400~1401,1498
    rna:1x:2~76 790,966,1229,1338~1341,1400
    4499 5f8k:1x
    (2.8Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00002905B5 RF00005 Escherichia
    coli
    K-12
    83333    		 26792896 Assembly1
    rna:1A:6~2906 2~3,11~13,24~25,74~76
    rna:1a:4~1533 30~32,34,38,40~41
    rna:1v:16~18 34~37
    4500 5f8k:2A
    (2.8Å)
    		 2867 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001698E8 RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    HB8
    300852    		 26792896 Assembly2
    rna:2B:1~120 861~864,915,917~919,958
    rna:2a:4~1533 1689,1700~1704,1832,1836~1837,
    1846,1848,1912~1913,1915~1916,
    1919~1920,1947~1948,1959~1961,
    2863~2864
    rna:2x:2~76 1907~1909,1922~1924,2251~2253,
    2255,2450~2451,2601~2602
    << < 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 > >>
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    Reference:
  • Chengxin Zhang, Lydia Freddolino (2024) "FURNA: a database for function annotations of RNA structures," PLOS Biology 22(7): e3002476.