SEQ2FUN

FURNA
Download all results in tab-seperated text for 14210 RNAs.
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  • Hover over Ligand to view the name of the ligand and the ligand-binding nucleotides on the RNA.

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    # PDB
    (Resolution)    		 Length EC number
    & GO term     		RNAcentral Rfam Taxon PubMed ATtRACT
    motif     		Ligand &
    binding nucleotides
    4801 5j4c:1y
    (2.8Å)
    		 74 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    562    		 27079977 Assembly1
    rna:1A:6~2906 19,56,71~72,76
    rna:1x:2~76 35~36
    4802 5j4c:2A
    (2.8Å)
    		 2800 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001698E8 RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    HB8
    300852    		 27079977 Assembly2
    rna:2B:1~120 861~864,915,917~918,958
    rna:2a:4~1532 1700~1704,1832,1836~1837,1846,
    1848,1912~1916,1919~1920,1947~
    1948,1959~1961,2864
    rna:2w:2~76 882,897,1913,2482~2483,2506~25
    07,2553~2555,2583~2585,2602
    rna:2x:2~76 1907~1909,1922~1924,2251~2253,
    2450~2451,2601~2602
    rna:2y:1~76 1851,2112,2169,2394~2395,2421~
    2422,2432
    4803 5j4c:2B
    (2.8Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DEE8 RF00001 Thermus
    thermophilus
    HB8
    300852    		 27079977 Assembly2
    rna:2A:6~2897 78~81,90,97~98,100~102
    4804 5j4c:2a
    (2.8Å)
    		 1503 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DFED RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 27079977 Assembly2
    rna:2A:6~2897 702,783~784,899~900,1407~1409,
    1418,1429~1430,1442A,1473~1475
    ,1483~1484,1493~1496,1517
    rna:2v:12~24 926,1196,1397,1400~1402,1492~1
    493,1498,1503,1505,1507
    rna:2w:2~76 530,1054,1493
    rna:2x:2~76 790,966,1229~1230,1338~1340,14
    00
    4805 5j4c:2v
    (2.8Å)
    		 13 N/A N/A N/A synthetic
    construct
    32630    		 27079977 Assembly2
    rna:2a:4~1532 12~13,15~20,22~24
    rna:2w:2~76 19~21
    rna:2x:2~76 16~18
    4806 5j4c:2w
    (2.8Å)
    		 72 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    562    		 27079977 Assembly2
    rna:2A:6~2897 19,37~38,56,64,74~76
    rna:2a:4~1532 34~37
    rna:2v:12~24 34~37
    4807 5j4c:2x
    (2.8Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    562    		 27079977 Assembly2
    rna:2A:6~2897 11~13,24~25,74~76
    rna:2a:4~1532 30~32,34,38~41
    rna:2v:12~24 34~37
    4808 5j4c:2y
    (2.8Å)
    		 73 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    562    		 27079977 Assembly2
    rna:2A:6~2897 19,56,71~72,76
    rna:2x:2~76 35~36
    4809 5j4d:A
    (3.1Å)
    		 1507 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000A763A8 RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB27
    262724    		 27107638 Assembly1
    rna:B:6~2897 702,783~784,899,1407~1409,1418
    ,1420,1429,1443,1473~1475,1483
    ~1484,1493~1496,1517
    rna:HA:13~23 530,926,1054,1196,1400~1402,14
    92~1493,1498
    rna:IA:1~76 790,966,1229~1230,1338~1340,14
    00
    4810 5j4d:B
    (3.1Å)
    		 2880 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000A76375 RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    HB27
    262724    		 27107638 Assembly1
    rna:A:4~1533 1700~1704,1832,1836~1837,1846,
    1848,1912~1913,1915~1916,1919~
    1920,1947~1948,1950,1959~1961,
    2863~2864
    rna:C:1~119 861~864,915~919,1027
    rna:D:1~76 1851~1852,2112,2169,2180,2394~
    2395,2421~2422
    rna:IA:1~76 1907~1909,1922~1924,2064,2251~
    2253,2255,2450~2451,2601~2602
    4811 5j4d:C
    (3.1Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DFF2 RF00001 Thermus
    thermophilus
    HB27
    262724    		 27107638 Assembly1
    rna:B:6~2897 78~81,88,96~100
    4812 5j4d:D
    (3.1Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    K-12
    83333    		 27107638 Assembly1
    rna:B:6~2897 17A,19,56,71~72,76
    4813 5j4d:FB
    (3.1Å)
    		 1507 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000A763A8 RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB27
    262724    		 27107638 Assembly2
    rna:GB:6~2897 702,783~784,899,1407~1409,1418
    ,1429~1430,1443,1473~1475,1483
    ~1484,1493~1496,1517
    rna:MC:13~23 530,926,1054,1196,1400~1402,14
    92~1493,1498
    rna:NC:1~76 790,966,1229~1230,1338~1340,14
    00
    4814 5j4d:GB
    (3.1Å)
    		 2880 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000A76375 RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    HB27
    262724    		 27107638 Assembly2
    rna:FB:4~1533 1689,1700~1704,1832,1836~1837,
    1846,1848,1912~1913,1915~1916,
    1919~1920,1947~1948,1959~1961,
    2863~2864
    rna:HB:1~119 861~864,915~919,1027
    rna:IB:1~76 1851~1852,2112,2169,2394~2395,
    2421~2422
    rna:NC:1~76 1907~1909,1922~1924,2064,2251~
    2253,2255,2450~2451,2602
    4815 5j4d:HA
    (3.1Å)
    		 11 N/A N/A N/A synthetic
    construct
    32630    		 27107638 Assembly1
    rna:A:4~1533 15~22
    rna:D:1~76 13~14
    rna:IA:1~76 16~18
    4816 5j4d:HB
    (3.1Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DFF2 RF00001 Thermus
    thermophilus
    HB27
    262724    		 27107638 Assembly2
    rna:GB:6~2897 78~81,88,96~100
    4817 5j4d:IA
    (3.1Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    K-12
    83333    		 27107638 Assembly1
    rna:A:4~1533 30~32,34,38~41
    rna:B:6~2897 2~3,11~13,24~25,74~76
    rna:HA:13~23 34~37
    4818 5j4d:IB
    (3.1Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    K-12
    83333    		 27107638 Assembly2
    rna:GB:6~2897 19,56,71~72,76
    4819 5j4d:MC
    (3.1Å)
    		 11 N/A N/A N/A synthetic
    construct
    32630    		 27107638 Assembly2
    rna:FB:4~1533 15~22
    rna:IB:1~76 13~14
    rna:NC:1~76 16~18
    4820 5j4d:NC
    (3.1Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    K-12
    83333    		 27107638 Assembly2
    rna:FB:4~1533 30~31,34,38~41
    rna:GB:6~2897 2~3,11~13,24~25,74~76
    rna:MC:13~23 34~37
    4821 5j5b:AA
    (2.8Å)
    		 1534 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000081169C RF00177
    RF01959
    RF01960    		 Escherichia
    coli
    K-12
    83333    		 27382179 Assembly1
    rna:DA:1~2903 702,899,1407~1409,1418~1420,14
    28~1429,1473~1475,1483~1484,14
    91,1493~1496,1517
    4822 5j5b:BA
    (2.8Å)
    		 1533 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000081169C RF00177
    RF01959
    RF01960    		 Escherichia
    coli
    K-12
    83333    		 27382179 Assembly2
    rna:CA:1~2904 702,783~784,899,1407~1409,1418
    ~1420,1429,1473~1475,1483~1484
    ,1492~1496,1517
    4823 5j5b:CA
    (2.8Å)
    		 2898 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B0F34 RF02540
    RF02541    		 Escherichia
    coli
    K-12
    83333    		 27382179 Assembly2
    rna:BA:2~1534 1689,1700~1704,1832,1836~1837,
    1846,1848,1895,1912~1913,1915~
    1916,1919~1920,1947~1950,1959~
    1961
    rna:CB:2~119 861~864,915~919,958,2339
    4824 5j5b:CB
    (2.8Å)
    		 118 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000049E57 RF00001 Escherichia
    coli
    K-12
    83333    		 27382179 Assembly2
    rna:CA:1~2904 41,78~81,89,96~97,99~100
    4825 5j5b:DA
    (2.8Å)
    		 2897 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B0F34 RF02540
    RF02541    		 Escherichia
    coli
    K-12
    83333    		 27382179 Assembly1
    rna:AA:1~1534 1689,1700~1704,1832,1846,1912~
    1916,1919~1920,1947~1950,1959~
    1961
    rna:DB:1~120 861~864,915,917~919,958,2339
    4826 5j5b:DB
    (2.8Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000049E57 RF00001 Escherichia
    coli
    K-12
    83333    		 27382179 Assembly1
    rna:DA:1~2903 41,78~81,89,96~97,99~100
    4827 5j7l:AA
    (3.0Å)
    		 1534 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000A7637F RF00177
    RF01959
    RF01960    		 Escherichia
    coli
    K-12
    83333    		 27382179 Assembly1
    rna:DA:1~2903 702,1407~1409,1418~1420,1428~1
    429,1473~1475,1483~1484,1491,1
    493~1496,1517
    4828 5j7l:BA
    (3.0Å)
    		 1533 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000A7637F RF00177
    RF01959
    RF01960    		 Escherichia
    coli
    K-12
    83333    		 27382179 Assembly2
    rna:CA:1~2904 702,783~784,899,1407~1409,1418
    ~1420,1428~1430,1473~1475,1483
    ~1484,1492~1496,1517
    4829 5j7l:CA
    (3.0Å)
    		 2898 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B0F34 RF02540
    RF02541    		 Escherichia
    coli
    K-12
    83333    		 27382179 Assembly2
    rna:BA:2~1534 1689,1700~1704,1832,1836~1837,
    1846,1848,1895,1912~1913,1915~
    1916,1919~1920,1947~1950,1959~
    1961
    rna:CB:2~119 861~864,915,917~919,958,2339
    4830 5j7l:CB
    (3.0Å)
    		 118 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000049E57 RF00001 Escherichia
    coli
    K-12
    83333    		 27382179 Assembly2
    rna:CA:1~2904 41,78~81,89,96~97,99~100
    4831 5j7l:DA
    (3.0Å)
    		 2897 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B0F34 RF02540
    RF02541    		 Escherichia
    coli
    K-12
    83333    		 27382179 Assembly1
    rna:AA:1~1534 1689,1700~1704,1846,1912~1916,
    1919~1920,1947~1950,1959~1961
    rna:DB:1~120 861~864,915,917~919,958,2339
    4832 5j7l:DB
    (3.0Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000049E57 RF00001 Escherichia
    coli
    K-12
    83333    		 27382179 Assembly1
    rna:DA:1~2903 41,78~81,89,96~97,99~100
    4833 5j88:AA
    (3.32Å)
    		 1534 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000A76355 RF00177
    RF01959
    RF01960    		 Escherichia
    coli
    562    		 27382179 Assembly1
    rna:DA:1~2903 702,784,1407~1409,1418~1420,14
    28~1429,1473~1475,1483~1484,14
    93~1496,1517
    4834 5j88:BA
    (3.32Å)
    		 1533 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000A76355 RF00177
    RF01959
    RF01960    		 Escherichia
    coli
    562    		 27382179 Assembly2
    rna:CA:1~2904 702,783~784,899,1407~1409,1418
    ~1420,1428~1430,1473,1475,1483
    ~1484,1492~1496,1517
    4835 5j88:CA
    (3.32Å)
    		 2898 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B0F34 RF02540
    RF02541    		 Escherichia
    coli
    562    		 27382179 Assembly2
    rna:BA:2~1534 1689,1700,1702~1704,1832,1836~
    1837,1846,1848,1895,1912~1916,
    1919~1920,1948~1950,1959~1961
    rna:CB:2~119 861~863,915~919,958~959,2339
    4836 5j88:CB
    (3.32Å)
    		 118 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000049E57 RF00001 Escherichia
    coli
    562    		 27382179 Assembly2
    rna:CA:1~2904 41,78~81,89,96~97,99~100
    4837 5j88:DA
    (3.32Å)
    		 2897 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B0F34 RF02540
    RF02541    		 Escherichia
    coli
    562    		 27382179 Assembly1
    rna:AA:1~1534 1689,1700,1702~1704,1837,1846,
    1912~1913,1915~1916,1919~1920,
    1947~1950,1959~1961
    rna:DB:1~120 861~863,915,917~919,958,2339
    4838 5j88:DB
    (3.32Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000049E57 RF00001 Escherichia
    coli
    562    		 27382179 Assembly1
    rna:DA:1~2903 41,78~81,89,96~97,99~100
    4839 5j8a:AA
    (3.1Å)
    		 1534 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000A7637F RF00177
    RF01959
    RF01960    		 Escherichia
    coli
    562    		 27382179 Assembly1
    rna:DA:1~2903 702,783,899,1407~1409,1418~142
    0,1428~1429,1473~1475,1483~148
    4,1491,1493~1496,1517
    4840 5j8a:BA
    (3.1Å)
    		 1533 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000A7637F RF00177
    RF01959
    RF01960    		 Escherichia
    coli
    562    		 27382179 Assembly2
    rna:CA:1~2904 702,783~784,899,1407~1409,1418
    ,1428~1430,1473~1475,1483~1484
    ,1492~1496,1517
    4841 5j8a:CA
    (3.1Å)
    		 2898 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B0F34 RF02540
    RF02541    		 Escherichia
    coli
    562    		 27382179 Assembly2
    rna:BA:2~1534 1686,1689,1700,1702~1704,1832,
    1836~1837,1846,1848,1895,1912~
    1913,1915~1916,1919~1920,1947~
    1948,1959~1961
    rna:CB:2~119 861~864,915~919,958,2339
    4842 5j8a:CB
    (3.1Å)
    		 118 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000049E57 RF00001 Escherichia
    coli
    562    		 27382179 Assembly2
    rna:CA:1~2904 41,78~81,89,96~97,99~100
    4843 5j8a:DA
    (3.1Å)
    		 2897 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B0F34 RF02540
    RF02541    		 Escherichia
    coli
    562    		 27382179 Assembly1
    rna:AA:1~1534 1689,1700~1704,1832,1836,1846,
    1912~1916,1919~1920,1947~1950,
    1959~1961
    rna:DB:1~120 861~864,915,917~919,958,2339
    4844 5j8a:DB
    (3.1Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000049E57 RF00001 Escherichia
    coli
    562    		 27382179 Assembly1
    rna:DA:1~2903 41,78~81,89,96~97,99~100
    4845 5j8b:A
    (2.6Å)
    		 2874 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001698E8 RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    HB8
    300852    		 27092003 Assembly1
    rna:B:1~120 907~910,960~964,1002
    rna:a:5~1509 1735,1746~1750,1862,1866~1867,
    1876,1878,1933~1937,1940~1941,
    1968~1969,1971,1980~1982,2872~
    2873
    rna:w:1~76 941~942,1934,1965,2481,2494,25
    68
    rna:x:1~76 1928~1930,1943~1945,2262~2264,
    2266~2267,2450,2461~2462,2596,
    2613
    rna:y:1~76 1880~1882,1912~1914,2133,2190,
    2405~2406,2432~2433,2443
    4846 5j8b:B
    (2.6Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DEE8 RF00001 Thermus
    thermophilus
    HB8
    300852    		 27092003 Assembly1
    rna:A:5~2905 78~81,90,97~98,100~102
    4847 5j8b:a
    (2.6Å)
    		 1498 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DFED RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 27092003 Assembly1
    rna:A:5~2905 686,767~768,877~878,1390~1392,
    1401,1403,1412~1413,1426,1451~
    1453,1461~1462,1472~1474,1495
    rna:v:12~24 904,1178,1380,1383~1384,1386,1
    470~1471,1476,1481,1483~1485
    rna:w:1~76 514~515,1037,1470~1471
    rna:x:1~76 774,944,1211~1212,1320~1322,13
    83
    rna:y:1~76 677~678,915
    4848 5j8b:v
    (2.6Å)
    		 13 N/A N/A N/A Thermus
    thermophilus
    HB8
    300852    		 27092003 Assembly1
    rna:a:5~1509 12~13,15~20,22~24
    rna:w:1~76 19~21
    rna:x:1~76 16~18
    4849 5j8b:w
    (2.6Å)
    		 74 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Thermus
    thermophilus
    HB8
    300852    		 27092003 Assembly1
    rna:A:5~2905 1,18~19,37~38,57,76
    rna:a:5~1509 34~37
    rna:v:12~24 34~37
    4850 5j8b:x
    (2.6Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Thermus
    thermophilus
    HB8
    300852    		 27092003 Assembly1
    rna:A:5~2905 2~3,11~13,24~25,74~76
    rna:a:5~1509 29~32,34,38~41
    rna:v:12~24 34~37
    4851 5j8b:y
    (2.6Å)
    		 74 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Thermus
    thermophilus
    HB8
    300852    		 27092003 Assembly1
    rna:A:5~2905 3~4,19,56,70~72,76
    rna:a:5~1509 33~34,36~38
    4852 5j91:AA
    (2.96Å)
    		 1534 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000081169C RF00177
    RF01959
    RF01960    		 Escherichia
    coli
    562    		 27382179 Assembly1
    rna:DA:1~2903 702,1407~1409,1418,1420,1429,1
    473~1475,1483~1484,1491,1493~1
    496,1517
    4853 5j91:BA
    (2.96Å)
    		 1533 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000081169C RF00177
    RF01959
    RF01960    		 Escherichia
    coli
    562    		 27382179 Assembly2
    rna:CA:1~2904 702,783~784,899,1407~1409,1418
    ,1420,1429~1430,1473~1475,1483
    ~1484,1492~1496,1517
    4854 5j91:CA
    (2.96Å)
    		 2898 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B0F34 RF02540
    RF02541    		 Escherichia
    coli
    562    		 27382179 Assembly2
    rna:BA:2~1534 1689,1700~1704,1832,1836~1837,
    1846,1848,1895,1912~1913,1915~
    1916,1919~1920,1947~1948,1950,
    1959~1961
    rna:CB:2~119 861~864,915~919,958,2339
    4855 5j91:CB
    (2.96Å)
    		 118 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000049E57 RF00001 Escherichia
    coli
    562    		 27382179 Assembly2
    rna:CA:1~2904 41,78~81,89,96~97,99~100
    4856 5j91:DA
    (2.96Å)
    		 2897 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B0F34 RF02540
    RF02541    		 Escherichia
    coli
    K-12
    83333    		 27382179 Assembly1
    rna:AA:1~1534 1689,1700~1704,1846,1912~1916,
    1919~1920,1947~1948,1950,1959~
    1961
    rna:DB:1~120 861~864,915,917~919,958,2339
    4857 5j91:DB
    (2.96Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000049E57 RF00001 Escherichia
    coli
    562    		 27382179 Assembly1
    rna:DA:1~2903 41,78~81,89,96~97,99~100
    4858 5jaj:X
    (1.5Å)
    		 11 N/A URS0000A76390 N/A synthetic
    construct
    32630    		 27203181 Assembly1
    rna:Y:1~10 1~11
    4859 5jaj:Y
    (1.5Å)
    		 10 N/A URS0000A76349 N/A synthetic
    construct
    32630    		 27203181 Assembly1
    rna:X:1~11 1~10
    4860 5jb2:X
    (2.2Å)
    		 11 N/A URS0000A76390 N/A synthetic
    construct
    32630    		 27203181 Assembly1
    rna:Y:1~10 1~11
    4861 5jb2:Y
    (2.2Å)
    		 10 N/A URS0000A76349 N/A synthetic
    construct
    32630    		 27203181 Assembly1
    rna:X:1~11 1~10
    4862 5jb3:2
    (5.34Å)
    		 1495 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000A77851 RF00177
    RF01959
    RF01960    		 Pyrococcus
    abyssi
    GE5
    272844    		 27819266 Assembly1
    rna:5:805~822 884,1360~1361,1363,1448,1453,1
    458,1460,1487~1495
    4863 5jb3:5
    (5.34Å)
    		 18 N/A N/A N/A Pyrococcus
    abyssi
    GE5
    272844    		 27819266 Assembly1
    rna:2:1~1495 805~815,817~822
    4864 5jbh:2
    (5.34Å)
    		 1495 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000A763A7 RF00177
    RF01959
    RF01960    		 Pyrococcus
    abyssi
    GE5
    272844    		 27819266 Assembly1
    rna:5:805~822 884,1360~1361,1363,1448,1453,1
    458,1460~1461,1487~1495
    rna:4:2~77 925,1189~1190,1298~1301,1360
    4865 5jbh:4
    (5.34Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS0000A76384 RF00005 Escherichia
    coli
    562    		 27819266 Assembly1
    rna:2:1~1495 30~33,35,41~43
    rna:5:805~822 35~38
    4866 5jbh:5
    (5.34Å)
    		 18 N/A N/A N/A Pyrococcus
    2260    		 27819266 Assembly1
    rna:2:1~1495 805~815,817~822
    rna:4:2~77 819~821
    4867 5jbj:X
    (3.58Å)
    		 12 N/A URS0000A76340 N/A synthetic
    construct
    32630    		 27203181 Assembly1
    rna:Y:13~24 1~12
    4868 5jbj:Y
    (3.58Å)
    		 12 N/A URS0000A76340 N/A synthetic
    construct
    32630    		 27203181 Assembly1
    rna:X:1~12 13~24
    4869 5jc3:C
    (2.6Å)
    		 10 N/A URS0000A76349 N/A synthetic
    construct
    32630    		 27203181 Assembly2
    rna:D:1~10 1~10
    4870 5jc3:D
    (2.6Å)
    		 10 N/A URS0000A76349 N/A synthetic
    construct
    32630    		 27203181 Assembly2
    rna:C:1~10 1~10
    4871 5jc3:X
    (2.6Å)
    		 10 N/A URS0000A76349 N/A synthetic
    construct
    32630    		 27203181 Assembly1
    rna:Y:1~10 1~10
    4872 5jc3:Y
    (2.6Å)
    		 10 N/A URS0000A76349 N/A synthetic
    construct
    32630    		 27203181 Assembly1
    rna:X:1~10 1~10
    4873 5jc7:X
    (2.75Å)
    		 24 N/A URS0000A76337 N/A synthetic
    construct
    32630    		 27203181 Assembly1
    rna:Y:2~25 1~24
    4874 5jc7:Y
    (2.75Å)
    		 24 N/A URS0000A763A9 N/A synthetic
    construct
    32630    		 27203181 Assembly1
    rna:X:1~24 2~25
    4875 5jc9:AA
    (3.03Å)
    		 1534 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000A7637F RF00177
    RF01959
    RF01960    		 Escherichia
    coli
    K-12
    83333    		 27382179 Assembly1
    rna:DA:1~2903 702,1407~1409,1418~1420,1429,1
    473~1475,1483~1484,1491,1493~1
    496,1517
    4876 5jc9:BA
    (3.03Å)
    		 1533 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000A7637F RF00177
    RF01959
    RF01960    		 Escherichia
    coli
    K-12
    83333    		 27382179 Assembly2
    rna:CA:1~2904 702,783~784,899,1407~1409,1418
    ~1419,1428~1430,1473,1475,1483
    ~1484,1492~1496,1517
    4877 5jc9:CA
    (3.03Å)
    		 2898 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B0F34 RF02540
    RF02541    		 Escherichia
    coli
    K-12
    83333    		 27382179 Assembly2
    rna:BA:2~1534 1689,1700,1702~1704,1832,1836~
    1837,1846,1848,1912~1913,1915~
    1916,1919~1920,1947~1949,1959~
    1961
    rna:CB:2~119 861~864,915,917~919,958,2339
    4878 5jc9:CB
    (3.03Å)
    		 118 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000049E57 RF00001 Escherichia
    coli
    K-12
    83333    		 27382179 Assembly2
    rna:CA:1~2904 41,78~81,89,96~97,99~100
    4879 5jc9:DA
    (3.03Å)
    		 2897 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B0F34 RF02540
    RF02541    		 Escherichia
    coli
    K-12
    83333    		 27382179 Assembly1
    rna:AA:1~1534 1689,1700~1704,1846,1912~1916,
    1919~1920,1947~1950,1959~1961
    rna:DB:1~120 861~864,915,917~919,958,2339~2
    340
    4880 5jc9:DB
    (3.03Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000049E57 RF00001 Escherichia
    coli
    K-12
    83333    		 27382179 Assembly1
    rna:DA:1~2903 41,78~81,89,96~97,99~100
    4881 5jcf:C
    (2.6Å)
    		 10 N/A URS0000A76349 N/A synthetic
    construct
    32630    		 27203181 Assembly2
    rna:D:1~10 1~10
    4882 5jcf:D
    (2.6Å)
    		 10 N/A URS0000A76349 N/A synthetic
    construct
    32630    		 27203181 Assembly2
    rna:C:1~10 1~10
    4883 5jcf:X
    (2.6Å)
    		 10 N/A URS0000A76349 N/A synthetic
    construct
    32630    		 27203181 Assembly1
    rna:Y:0~10 1~10
    4884 5jcf:Y
    (2.6Å)
    		 11 N/A URS0000A76388 N/A synthetic
    construct
    32630    		 27203181 Assembly1
    rna:X:1~10 1~10
    4885 5jch:U
    (2.95Å)
    		 10 N/A URS0000A76349 N/A synthetic
    construct
    32630    		 27203181 Assembly2
    rna:V:1~10 1~10
    4886 5jch:V
    (2.95Å)
    		 10 N/A URS0000A76349 N/A synthetic
    construct
    32630    		 27203181 Assembly2
    rna:U:1~10 1~10
    4887 5jch:X
    (2.95Å)
    		 10 N/A URS0000A76349 N/A synthetic
    construct
    32630    		 27203181 Assembly1
    rna:Y:1~10 1~10
    4888 5jch:Y
    (2.95Å)
    		 10 N/A URS0000A76349 N/A synthetic
    construct
    32630    		 27203181 Assembly1
    rna:X:1~10 1~10
    4889 5jcs:x
    (9.5Å)
    		 3394 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000061F377 RF02540
    RF02543    		 Saccharomyces
    cerevisiae
    4932    		 26619264
    M107_0.6

    M080_0.6

    M299_0.6

    16    		 Assembly1
    rna:y:1~158 3~5,7,10~14,16~18,20~22,59,143
    ,236,331,333,336~337,339,341,3
    45~346,349,368~369,398,406~409
    ,411~415,419,657,691,1380,1397
    ,1399,1420,1441,1530,1541,1584
    ,1586,1618,1830,1832,2386
    rna:z:1~121 1155~1156,1197,1201,2842
    4890 5jcs:y
    (9.5Å)
    		 158 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001BF64E RF00002 Saccharomyces
    cerevisiae
    4932    		 26619264
    441    		 Assembly1
    rna:x:3~3396 3~6,8~13,15~22,24~26,28,31,33,
    35~37,95,104,106,108~109,112~1
    15,126,129,137,139~141,143~149
    ,154~157
    4891 5jcs:z
    (9.5Å)
    		 121 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000055688D RF00001 Saccharomyces
    cerevisiae
    4932    		 26619264 Assembly1
    rna:x:3~3396 75~76,86,90
    4892 5jte:AA
    (3.6Å)
    		 1539 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DDC0 RF00177
    RF01959
    RF01960    		 Escherichia
    coli
    562    		 27380950 Assembly1
    rna:AV:13~22 693,926,1397,1400~1401,1492~14
    93,1498
    rna:AW:1~76 530,1054,1493
    rna:AX:1~76 790,966,1229,1338~1340,1400
    rna:AY:1~73 694,1382~1383
    rna:BA:1~2903 702,783~784,899~900,1407~1409,
    1418~1420,1429,1473~1475,1483~
    1484,1494~1496,1517
    4893 5jte:AV
    (3.6Å)
    		 10 N/A N/A N/A Escherichia
    coli
    562    		 27380950 Assembly1
    rna:AA:2~1540 13,16~20,22
    rna:AW:1~76 19~21
    rna:AX:1~76 16~18
    rna:AY:1~73 13~15
    4894 5jte:AW
    (3.6Å)
    		 74 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00021ED9A1 RF00005 Escherichia
    coli
    562    		 27380950 Assembly1
    rna:AA:2~1540 34~37
    rna:AV:13~22 34~37
    rna:BA:1~2903 37~38,56,63,74~76
    4895 5jte:AX
    (3.6Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000009EE82 RF00005 Escherichia
    coli
    562    		 27380950 Assembly1
    rna:AA:2~1540 30~31,34,38,40~41
    rna:AV:13~22 34~37
    rna:BA:1~2903 12,24,74~76
    4896 5jte:AY
    (3.6Å)
    		 71 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS0000E60BC5 RF00005 Escherichia
    coli
    562    		 27380950 Assembly1
    rna:AA:2~1540 34,38~39
    rna:AV:13~22 34~37
    rna:BA:1~2903 19,56,71
    4897 5jte:BA
    (3.6Å)
    		 2897 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000A7632D RF02540
    RF02541    		 Escherichia
    coli
    562    		 27380950 Assembly1
    rna:AA:2~1540 1700,1702~1703,1831~1832,1837,
    1846,1848,1895,1912~1916,1919~
    1920,1947~1950,1959~1961
    rna:AW:1~76 896,1913,2483,2506~2507,2554~2
    555,2573,2583~2585
    rna:AX:1~76 1923,2063,2251~2252,2450~2451,
    2602
    rna:AY:1~73 1851,2112
    rna:BB:2~119 861~864,915,917~918,958~959
    4898 5jte:BB
    (3.6Å)
    		 118 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00008116C5 RF00001 Escherichia
    coli
    562    		 27380950 Assembly1
    rna:BA:1~2903 78~80,89,96~97,99~100
    4899 5ju8:AA
    (3.6Å)
    		 1539 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DDC0 RF00177
    RF01959
    RF01960    		 Escherichia
    coli
    K-12
    83333    		 27380950 Assembly1
    rna:AV:13~22 693,789,926,1397,1400~1402,149
    8
    rna:AX:1~76 790,966,1229~1230,1338~1340
    rna:AY:1~73 694,1382~1383
    rna:BA:1~2903 702,784,791,899~900,1407~1408,
    1418,1428~1430,1473~1475,1483~
    1484,1492~1495,1517
    4900 5ju8:AV
    (3.6Å)
    		 10 N/A N/A N/A Escherichia
    coli
    562    		 27380950 Assembly1
    rna:AA:2~1540 13~14,16~18,22
    rna:AX:1~76 16~18
    rna:AY:1~73 13~15
    << < 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 > >>
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    Reference:
  • Chengxin Zhang, Lydia Freddolino (2024) "FURNA: a database for function annotations of RNA structures," PLOS Biology 22(7): e3002476.