SEQ2FUN

FURNA
Download all results in tab-seperated text for 16611 RNAs.
  • Click the entry in the '#' column to view structure details of that RNA chain.
  • Hover over PDB to view the title of the structure.
  • Hover over Rfam to view names of Rfam families.
  • Hover over PubMed to view title of the PubMed publications.
  • Hover over Ligand to view the name of the ligand and the ligand-binding nucleotides on the RNA.

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    # PDB
    (Resolution)    		 Length EC number
    & GO term     		RNAcentral Rfam Taxon PubMed ATtRACT
    motif     		Ligand &
    binding nucleotides
    501 1yls:A
    (3.0Å)
    		 11 N/A URS000080DF4A N/A synthetic
    construct
    32630    		 15723077 Assembly1
    rna:B:201~238 101~111
    502 1yls:B
    (3.0Å)
    		 38 N/A URS000080E1B2 N/A synthetic
    construct
    32630    		 15723077 Assembly1
    rna:A:101~111 201~207,214~216,233~234
    503 1yls:C
    (3.0Å)
    		 11 N/A URS000080DF4A N/A synthetic
    construct
    32630    		 15723077 Assembly2
    rna:D:201~238 101~111
    504 1yls:D
    (3.0Å)
    		 38 N/A URS000080E1B2 N/A synthetic
    construct
    32630    		 15723077 Assembly2
    rna:C:101~111 201~207,214~216,233~234
    505 1yrj:A
    (2.7Å)
    		 23 N/A URS000080E29E N/A synthetic
    construct
    32630    		 15849690 Assembly1
    rna:B:25~46 2~16,19~23
    506 1yrj:B
    (2.7Å)
    		 22 N/A URS000080E29E N/A synthetic
    construct
    32630    		 15849690 Assembly1
    rna:A:1~23 26~40,42~46
    507 1yrm:A
    (2.5Å)
    		 16 N/A URS000080DF42 N/A synthetic
    construct
    32630    		 16190727 Assembly1
    rna:B:1~16 1~16
    508 1yrm:B
    (2.5Å)
    		 16 N/A URS000080DF42 N/A synthetic
    construct
    32630    		 16190727 Assembly1
    rna:A:1~16 1~16
    509 1yrm:C
    (2.5Å)
    		 16 N/A URS000080DF42 N/A synthetic
    construct
    32630    		 16190727 Assembly2
    rna:C-2:1~16 1~16
    510 1ysh:A
    (9.5Å)
    		 28 N/A URS000080E2C0 N/A synthetic
    construct
    32630    		 15864315 Assembly1
    rna:F:1579~1612 799,815~816
    511 1ysh:F
    (9.5Å)
    		 34 N/A URS000080E2B3 N/A synthetic
    construct
    32630    		 15864315 Assembly1
    rna:A:792~819 1597~1599
    512 1yvp:C
    (2.2Å)
    		 10 N/A URS000080DF3E N/A synthetic
    construct
    32630    		 15907467 Assembly1
    rna:D:1~10 1~8
    513 1yvp:D
    (2.2Å)
    		 10 N/A URS000080E06D N/A synthetic
    construct
    32630    		 15907467 Assembly1
    rna:C:1~10 3~10
    514 1yvp:E
    (2.2Å)
    		 10 N/A URS000080DF3E N/A synthetic
    construct
    32630    		 15907467 Assembly2
    rna:F:1~10 1~8
    515 1yvp:F
    (2.2Å)
    		 10 N/A URS000080E06D N/A synthetic
    construct
    32630    		 15907467 Assembly2
    rna:E:1~10 3~10
    516 1yxp:A
    (2.4Å)
    		 23 N/A URS000080E167 N/A synthetic
    construct
    32630    		 16403527 Assembly1
    rna:B:1~23 10~16
    517 1yxp:B
    (2.4Å)
    		 23 N/A URS000080E167 N/A synthetic
    construct
    32630    		 16403527 Assembly1
    rna:A:1~23 10~16
    518 1yy0:A
    (3.2Å)
    		 16 N/A URS000080DF42 N/A synthetic
    construct
    32630    		 16190727 Assembly1
    rna:B:1~16 1~16
    519 1yy0:B
    (3.2Å)
    		 16 N/A URS000080DF42 N/A synthetic
    construct
    32630    		 16190727 Assembly1
    rna:A:1~16 1~16
    520 1yy0:C
    (3.2Å)
    		 16 N/A URS000080DF42 N/A synthetic
    construct
    32630    		 16190727 Assembly2
    rna:C-2:1~16 1~16
    521 1yyk:C
    (2.5Å)
    		 12 N/A URS000080DE83 N/A synthetic
    construct
    32630    		 16216575 Assembly1
    rna:D:13~24 1~12
    522 1yyk:D
    (2.5Å)
    		 12 N/A URS000080DE83 N/A synthetic
    construct
    32630    		 16216575 Assembly1
    rna:C:1~12 13~24
    523 1yyk:E
    (2.5Å)
    		 12 N/A URS000080DE83 N/A synthetic
    construct
    32630    		 16216575 Assembly1
    rna:F:13~24 1~12
    524 1yyk:F
    (2.5Å)
    		 12 N/A URS000080DE83 N/A synthetic
    construct
    32630    		 16216575 Assembly1
    rna:E:1~12 13~24
    525 1yyo:C
    (2.9Å)
    		 12 N/A URS000080DE83 N/A synthetic
    construct
    32630    		 16216575 Assembly1
    rna:D:13~24 1~12
    526 1yyo:D
    (2.9Å)
    		 12 N/A URS000080DE83 N/A synthetic
    construct
    32630    		 16216575 Assembly1
    rna:C:1~12 13~24
    527 1yyo:E
    (2.9Å)
    		 12 N/A URS000080DE83 N/A synthetic
    construct
    32630    		 16216575 Assembly1
    rna:F:13~24 1~12
    528 1yyo:F
    (2.9Å)
    		 12 N/A URS000080DE83 N/A synthetic
    construct
    32630    		 16216575 Assembly1
    rna:E:1~12 13~24
    529 1yyw:E
    (2.8Å)
    		 12 N/A URS000080E28A N/A synthetic
    construct
    32630    		 16216575 Assembly1
    rna:F:13~24 1~12
    530 1yyw:F
    (2.8Å)
    		 12 N/A URS000080E28A N/A synthetic
    construct
    32630    		 16216575 Assembly1
    rna:E:1~12 13~24
    531 1yyw:G
    (2.8Å)
    		 12 N/A URS000080E28A N/A synthetic
    construct
    32630    		 16216575 Assembly1
    rna:H:13~24 1~12
    532 1yyw:H
    (2.8Å)
    		 12 N/A URS000080E28A N/A synthetic
    construct
    32630    		 16216575 Assembly1
    rna:G:1~12 13~24
    533 1yyw:I
    (2.8Å)
    		 12 N/A URS000080E28A N/A synthetic
    construct
    32630    		 16216575 Assembly2
    rna:J:13~24 1~12
    534 1yyw:J
    (2.8Å)
    		 12 N/A URS000080E28A N/A synthetic
    construct
    32630    		 16216575 Assembly2
    rna:I:1~12 13~24
    535 1yyw:K
    (2.8Å)
    		 12 N/A URS000080E28A N/A synthetic
    construct
    32630    		 16216575 Assembly2
    rna:L:13~24 1~12
    536 1yyw:L
    (2.8Å)
    		 12 N/A URS000080E28A N/A synthetic
    construct
    32630    		 16216575 Assembly2
    rna:K:1~12 13~24
    537 1yz9:C
    (2.1Å)
    		 11 N/A URS000080E0A2 N/A synthetic
    construct
    32630    		 16216575 Assembly1
    rna:D:12~22 1~9
    rna:F:12~22 10~11
    538 1yz9:D
    (2.1Å)
    		 11 N/A URS000080E0A2 N/A synthetic
    construct
    32630    		 16216575 Assembly1
    rna:C:1~11 12~20
    539 1yz9:E
    (2.1Å)
    		 11 N/A URS000080E0A2 N/A synthetic
    construct
    32630    		 16216575 Assembly1
    rna:F:12~22 1~9
    540 1yz9:F
    (2.1Å)
    		 11 N/A URS000080E0A2 N/A synthetic
    construct
    32630    		 16216575 Assembly1
    rna:C:1~11 21~22
    rna:E:1~11 12~15,17~20
    541 1yzd:A
    (2.35Å)
    		 16 N/A URS000080DF15 N/A synthetic
    construct
    32630    		 16190727 Assembly1
    rna:B:1~16 1~16
    542 1yzd:B
    (2.35Å)
    		 16 N/A URS000080DF15 N/A synthetic
    construct
    32630    		 16190727 Assembly1
    rna:A:1 1~16
    543 1yzd:C
    (2.35Å)
    		 16 N/A URS000080DF15 N/A synthetic
    construct
    32630    		 16190727 Assembly2
    rna:C-2:1~16 1~16
    544 1z79:A
    (2.55Å)
    		 16 N/A URS000080DF42 N/A synthetic
    construct
    32630    		 16190727 Assembly1
    rna:B:1~16 1~16
    545 1z79:B
    (2.55Å)
    		 16 N/A URS000080DF42 N/A synthetic
    construct
    32630    		 16190727 Assembly1
    rna:A:1~16 1~16
    546 1z79:C
    (2.55Å)
    		 16 N/A URS000080DF42 N/A synthetic
    construct
    32630    		 16190727 Assembly2
    rna:C-2:1~16 1~16
    547 1z7f:A
    (2.1Å)
    		 16 N/A URS000080DF42 N/A synthetic
    construct
    32630    		 16190727 Assembly1
    rna:A-2:1~16 1~16
    548 1z7f:B
    (2.1Å)
    		 16 N/A URS000080DF42 N/A synthetic
    construct
    32630    		 16190727 Assembly2
    rna:C:17 1~16
    549 1z7f:C
    (2.1Å)
    		 16 N/A URS000080DF42 N/A synthetic
    construct
    32630    		 16190727 Assembly2
    rna:B:1~16 17~32
    550 1zci:A
    (1.65Å)
    		 23 N/A URS000080E167 N/A synthetic
    construct
    32630    		 16403527 Assembly1
    rna:B:1~23 9~16
    551 1zci:B
    (1.65Å)
    		 23 N/A URS000080E167 N/A synthetic
    construct
    32630    		 16403527 Assembly1
    rna:A:1~23 9~16
    552 1zci:C
    (1.65Å)
    		 23 N/A URS000080E167 N/A synthetic
    construct
    32630    		 16403527 Assembly2
    rna:D:1~23 9~16
    553 1zci:D
    (1.65Å)
    		 23 N/A URS000080E167 N/A synthetic
    construct
    32630    		 16403527 Assembly2
    rna:C:1~23 9~16
    554 1zdh:S
    (2.7Å)
    		 13 N/A URS000080DD3D N/A synthetic
    construct
    32630    		 9245600
    7523953
    8254664    		 Assembly1
    rna:S-6:4~16 4~9,12~16
    555 1zdi:S
    (2.7Å)
    		 13 N/A URS000080DDB6 N/A synthetic
    construct
    32630    		 9245600
    7523953
    8254664    		 Assembly1
    rna:S-6:4~16 4~9,12~16
    556 1zdk:S
    (2.86Å)
    		 19 N/A URS000080DD3D N/A synthetic
    construct
    32630    		 9917072 Assembly1
    rna:S-6:3~21 4~11,13~20
    557 1zev:A
    (1.58Å)
    		 18 N/A URS000080DEA4 N/A synthetic
    construct
    32630    		 16269545 Assembly1
    rna:B:1~18 1~18
    558 1zev:B
    (1.58Å)
    		 18 N/A URS000080DEA4 N/A synthetic
    construct
    32630    		 16269545 Assembly1
    rna:A:1~18 1~18
    559 1zft:A
    (2.33Å)
    		 13 N/A URS000080E09E N/A synthetic
    construct
    32630    		 16411744 Assembly1
    rna:B:2~13 2~5,7,9~13
    rna:C:15~31 6~7
    rna:D:31~49 3~6
    560 1zft:B
    (2.33Å)
    		 12 N/A URS000080E1BF N/A synthetic
    construct
    32630    		 16411744 Assembly1
    rna:A:1~13 2~13
    rna:C:15~31 10~12
    rna:D:31~49 11~13
    561 1zft:C
    (2.33Å)
    		 17 N/A URS000080DEF8 N/A synthetic
    construct
    32630    		 16411744 Assembly1
    rna:A:1~13 25~27
    rna:B:2~13 23~25
    rna:D:31~49 15~24,26~31
    562 1zft:D
    (2.33Å)
    		 19 N/A URS000080E34C N/A synthetic
    construct
    32630    		 16411744 Assembly1
    rna:A:1~13 36~38,40~42
    rna:B:2~13 42~43
    rna:C:15~31 31~36,38,40~49
    563 1zfv:A
    (2.4Å)
    		 13 N/A URS000080E09E N/A synthetic
    construct
    32630    		 16411744 Assembly1
    rna:B:2~13 2~5,7~13
    rna:C:15~31 6~7
    rna:D:31~49 3~6
    564 1zfv:B
    (2.4Å)
    		 12 N/A URS000080DDAC N/A synthetic
    construct
    32630    		 16411744 Assembly1
    rna:A:1~13 2~13
    rna:C:15~31 10~12
    rna:D:31~49 11~13
    565 1zfv:C
    (2.4Å)
    		 17 N/A URS000080DEF8 N/A synthetic
    construct
    32630    		 16411744 Assembly1
    rna:A:1~13 25~27
    rna:B:2~13 23~25
    rna:D:31~49 15~24,26~31
    566 1zfv:D
    (2.4Å)
    		 19 N/A URS000080E34C N/A synthetic
    construct
    32630    		 16411744 Assembly1
    rna:A:1~13 36~38,41~42
    rna:B:2~13 42~43
    rna:C:15~31 31~36,38,40~49
    567 1zfx:A
    (2.38Å)
    		 13 N/A URS000080E09E N/A synthetic
    construct
    32630    		 16411744 Assembly1
    rna:B:2~13 2~5,7~13
    rna:C:15~31 6~7
    rna:D:31~49 3~6
    568 1zfx:B
    (2.38Å)
    		 12 N/A URS000080DF3D N/A synthetic
    construct
    32630    		 16411744 Assembly1
    rna:A:1~13 2~13
    rna:C:15~31 10~12
    rna:D:31~49 11~13
    569 1zfx:C
    (2.38Å)
    		 17 N/A URS000080DEF8 N/A synthetic
    construct
    32630    		 16411744 Assembly1
    rna:A:1~13 25~27
    rna:B:2~13 23~25
    rna:D:31~49 15~24,26~31
    570 1zfx:D
    (2.38Å)
    		 19 N/A URS000080E34C N/A synthetic
    construct
    32630    		 16411744 Assembly1
    rna:A:1~13 36~38,41~42
    rna:B:2~13 42~43
    rna:C:15~31 31~36,38,40~49
    571 1zo3:A
    (13.8Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000011107D RF00005 Escherichia
    coli
    562    		 15935757 Assembly1
    rna:B:1~76 30~43
    572 1zo3:B
    (13.8Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000011107D RF00005 Escherichia
    coli
    562    		 15935757 Assembly1
    rna:A:1~76 27~29,31~38
    573 1zx7:A
    (2.15Å)
    		 15 N/A URS000080E2C8 N/A synthetic
    construct
    32630    		 16037995 Assembly1
    rna:B:21~34 2~7,10~16
    574 1zx7:B
    (2.15Å)
    		 14 N/A URS000080E37D N/A synthetic
    construct
    32630    		 16037995 Assembly1
    rna:A:2~16 21~34
    575 1zx7:C
    (2.15Å)
    		 15 N/A URS000080E2C8 N/A synthetic
    construct
    32630    		 16037995 Assembly2
    rna:D:21~34 2~7,10~13,15~16
    576 1zx7:D
    (2.15Å)
    		 14 N/A URS000080E37D N/A synthetic
    construct
    32630    		 16037995 Assembly2
    rna:C:2~16 21~34
    577 1zx7:E
    (2.15Å)
    		 15 N/A URS000080E2C8 N/A synthetic
    construct
    32630    		 16037995 Assembly3
    rna:F:21~34 2~7,10~16
    578 1zx7:F
    (2.15Å)
    		 14 N/A URS000080E37D N/A synthetic
    construct
    32630    		 16037995 Assembly3
    rna:E:2~16 21~34
    579 1zx7:G
    (2.15Å)
    		 15 N/A URS000080E2C8 N/A synthetic
    construct
    32630    		 16037995 Assembly4
    rna:H:21~34 2~7,10~16
    580 1zx7:H
    (2.15Å)
    		 14 N/A URS000080E37D N/A synthetic
    construct
    32630    		 16037995 Assembly4
    rna:G:2~16 21~34
    581 1zz5:A
    (3.0Å)
    		 15 N/A URS000080E2C8 N/A synthetic
    construct
    32630    		 16037995 Assembly1
    rna:B:21~34 2~7,10~16
    582 1zz5:B
    (3.0Å)
    		 14 N/A URS000080E37D N/A synthetic
    construct
    32630    		 16037995 Assembly1
    rna:A:2~16 21~34
    583 1zz5:C
    (3.0Å)
    		 15 N/A URS000080E2C8 N/A synthetic
    construct
    32630    		 16037995 Assembly2
    rna:D:21~34 2~7,10~16
    584 1zz5:D
    (3.0Å)
    		 14 N/A URS000080E37D N/A synthetic
    construct
    32630    		 16037995 Assembly2
    rna:C:2~16 21~34
    585 1zzn:B
    (3.37Å)
    		 197 GO:0000372 (P) Group I intron splicing URS000080E37C RF00028 synthetic
    construct
    32630    		 16141079
    15175762
    15547134
    6101203    		 Assembly1
    rna:C:191~6 1,5~10,59~62,83~84,87,127~128,
    130,172,179~190
    rna:D:3~1 10~12,37~38,87~88,168,170
    586 1zzn:C
    (3.37Å)
    		 22 N/A URS000080E339 N/A synthetic
    construct
    32630    		 16141079
    15175762
    15547134
    6101203    		 Assembly1
    rna:B:1~190 191~206,1~6
    587 205d:A
    (2.64Å)
    		 12 N/A URS000080E26D N/A synthetic
    construct
    32630    		 7719854 Assembly1
    rna:B:13~24 1~12
    588 205d:B
    (2.64Å)
    		 12 N/A URS000080E26D N/A synthetic
    construct
    32630    		 7719854 Assembly1
    rna:A:1~12 13~24
    589 21cc:A

    		 12 N/A N/A N/A chemical
    production
    metagenome
    2495586    		 N/A Assembly1
    rna:B:13 1~5,9~11
    590 21cc:B

    		 12 N/A N/A N/A chemical
    production
    metagenome
    2495586    		 N/A Assembly1
    rna:A:1~12 13~17,21~23
    591 21wj:B
    (2.87Å)
    		 42 N/A N/A N/A Bacteroidales
    bacterium
    2030927    		 N/A Assembly1
    rna:C:12~38 20~42
    592 21wj:C
    (2.87Å)
    		 27 N/A N/A N/A Bacteroidales
    bacterium
    2030927    		 N/A Assembly1
    rna:B:1~42 12~33
    593 247d:A
    (2.8Å)
    		 11 N/A N/A N/A N/A 8807843 Assembly1
    rna:A-2:1~11 1~7,9~11
    594 248d:A
    (1.83Å)
    		 11 N/A N/A N/A N/A 8807843 Assembly1
    rna:A-2:1~11 1~7,9~11
    595 255d:A
    (2.0Å)
    		 12 N/A URS000080DD82 N/A synthetic
    construct
    32630    		 1922368 Assembly1
    rna:A-2:1~12 1~6,8~12
    596 280d:A
    (2.4Å)
    		 12 N/A URS000080E1E2 N/A synthetic
    construct
    32630    		 8805576 Assembly1
    rna:B:13~24 1~12
    597 280d:B
    (2.4Å)
    		 12 N/A URS000080E1E2 N/A synthetic
    construct
    32630    		 8805576 Assembly1
    rna:A:1~12 13~24
    598 280d:C
    (2.4Å)
    		 12 N/A URS000080E1E2 N/A synthetic
    construct
    32630    		 8805576 Assembly2
    rna:D:37~48 25~36
    599 280d:D
    (2.4Å)
    		 12 N/A URS000080E1E2 N/A synthetic
    construct
    32630    		 8805576 Assembly2
    rna:C:25~36 37~48
    600 283d:A
    (2.3Å)
    		 12 N/A URS000080DE79 N/A synthetic
    construct
    32630    		 8917508 Assembly1
    rna:A-2:1~12 1~12
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    Reference:
  • Chengxin Zhang, Lydia Freddolino (2024) "FURNA: a database for function annotations of RNA structures," PLOS Biology 22(7): e3002476.