SEQ2FUN

FURNA
Download all results in tab-seperated text for 16611 RNAs.
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  • Hover over Ligand to view the name of the ligand and the ligand-binding nucleotides on the RNA.

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    # PDB
    (Resolution)    		 Length EC number
    & GO term     		RNAcentral Rfam Taxon PubMed ATtRACT
    motif     		Ligand &
    binding nucleotides
    6601 6ip8:zy
    (3.9Å)
    		 75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS0000416117 RF00005 Homo
    sapiens
    9606    		 31080011
    938

    886

    979

    660    		 Assembly1
    rna:1A:1~5069 73~75
    rna:2m:1~1869 29~30,33,39~41
    rna:zv:-2~9 33~36
    6602 6ip8:zz
    (3.9Å)
    		 163 GO:0043022 (F) ribosome binding URS0000EEAD00 RF00061 Homo
    sapiens
    9606    		 31080011
    M168_0.6

    748

    749

    779

    778

    M352_0.6

    s46

    1238

    399    		 Assembly1
    rna:2m:1~1869 136,265~268,271~272,295~296
    6603 6j6g:B
    (3.2Å)
    		 60 N/A N/A N/A Saccharomyces
    cerevisiae
    S288C
    559292    		 30879786 Assembly1
    rna:D:1~183 -4~0
    rna:E:1~103 1~6,8,266
    rna:L:1~1169 252~253,257~258,260~265,267~26
    9
    6604 6j6g:D
    (3.2Å)
    		 179 GO:0000386 (F) second spliceosomal tra...
    GO:0030627 (F) pre-mRNA 5'-splice site...
    GO:0000244 (P) spliceosomal tri-snRNP ...
    GO:0000353 (P) formation of quadruple ...
    GO:0000245 (P) spliceosomal complex as...
    GO:0000350 (P) generation of catalytic...
    GO:0000395 (P) mRNA 5'-splice site rec...
    GO:0000398 (P) mRNA splicing, via spli...
    GO:0034403 (P) alignment of 3' and 5' ...
    GO:0005682 (C) U5 snRNP
    GO:0046540 (C) U4/U6 x U5 tri-snRNP co...    		 URS000053F313 RF00020 Saccharomyces
    cerevisiae
    S288C
    559292    		 30879786 Assembly1
    rna:B:-12~276 96~100
    rna:E:1~103 98~99
    6605 6j6g:E
    (3.2Å)
    		 103 GO:0030621 (F) U4 snRNA binding
    GO:0017069 (F) snRNA binding
    GO:0000244 (P) spliceosomal tri-snRNP ...
    GO:0000353 (P) formation of quadruple ...
    GO:0000350 (P) generation of catalytic...
    GO:0000388 (P) spliceosome conformatio...
    GO:0000398 (P) mRNA splicing, via spli...
    GO:0005688 (C) U6 snRNP
    GO:0046540 (C) U4/U6 x U5 tri-snRNP co...    		 URS00006184A9 RF00026 Saccharomyces
    cerevisiae
    S288C
    559292    		 30879786 Assembly1
    rna:B:-12~276 45,47~51,58,79
    rna:D:1~183 72~73,75~76
    rna:L:1~1169 53,55~62,88~89,93~102
    6606 6j6g:L
    (3.2Å)
    		 208 GO:0045131 (F) pre-mRNA branch point b...
    GO:0030627 (F) pre-mRNA 5'-splice site...
    GO:0000348 (P) mRNA branch site recogn...
    GO:0000395 (P) mRNA 5'-splice site rec...
    GO:0000398 (P) mRNA splicing, via spli...
    GO:0005686 (C) U2 snRNP    		 URS000023C730 RF00004 Saccharomyces
    cerevisiae
    S288C
    559292    		 30879786 Assembly1
    rna:B:-12~276 32~43,47~48
    rna:E:1~103 4~13,16~17,21~23,26~29
    6607 6j6h:B
    (3.6Å)
    		 60 N/A N/A N/A Saccharomyces
    cerevisiae
    S288C
    559292    		 30879786 Assembly1
    rna:D:1~183 -4~0
    rna:E:1~103 1~6,8
    rna:L:1~1169 253,257~258,260~265,267~269
    6608 6j6h:D
    (3.6Å)
    		 179 GO:0000386 (F) second spliceosomal tra...
    GO:0030627 (F) pre-mRNA 5'-splice site...
    GO:0000244 (P) spliceosomal tri-snRNP ...
    GO:0000353 (P) formation of quadruple ...
    GO:0000245 (P) spliceosomal complex as...
    GO:0000350 (P) generation of catalytic...
    GO:0000395 (P) mRNA 5'-splice site rec...
    GO:0000398 (P) mRNA splicing, via spli...
    GO:0034403 (P) alignment of 3' and 5' ...
    GO:0005682 (C) U5 snRNP
    GO:0046540 (C) U4/U6 x U5 tri-snRNP co...    		 URS000053F313 RF00020 Saccharomyces
    cerevisiae
    S288C
    559292    		 30879786 Assembly1
    rna:B:-12~276 96~100
    rna:E:1~103 98~99
    6609 6j6h:E
    (3.6Å)
    		 103 GO:0030621 (F) U4 snRNA binding
    GO:0017069 (F) snRNA binding
    GO:0000244 (P) spliceosomal tri-snRNP ...
    GO:0000353 (P) formation of quadruple ...
    GO:0000350 (P) generation of catalytic...
    GO:0000388 (P) spliceosome conformatio...
    GO:0000398 (P) mRNA splicing, via spli...
    GO:0005688 (C) U6 snRNP
    GO:0046540 (C) U4/U6 x U5 tri-snRNP co...    		 URS00006184A9 RF00026 Saccharomyces
    cerevisiae
    S288C
    559292    		 30879786 Assembly1
    rna:B:-12~276 45~51,79
    rna:D:1~183 72~73,75~76
    rna:L:1~1169 53,55~62,88~89,93~102
    6610 6j6h:L
    (3.6Å)
    		 209 GO:0045131 (F) pre-mRNA branch point b...
    GO:0030627 (F) pre-mRNA 5'-splice site...
    GO:0000348 (P) mRNA branch site recogn...
    GO:0000395 (P) mRNA 5'-splice site rec...
    GO:0000398 (P) mRNA splicing, via spli...
    GO:0005686 (C) U2 snRNP    		 URS000023C730 RF00004 Saccharomyces
    cerevisiae
    S288C
    559292    		 30879786 Assembly1
    rna:B:-12~276 32~43,47
    rna:E:1~103 4~13,17,21~23,26~29
    6611 6j6n:B
    (3.86Å)
    		 57 N/A N/A N/A Saccharomyces
    cerevisiae
    S288C
    559292    		 30879786 Assembly1
    rna:D:1~183 -4~0
    rna:E:1~103 -1,3~8,70
    rna:L:1~1169 58,61~62,65~69,71~73
    6612 6j6n:D
    (3.86Å)
    		 179 GO:0000386 (F) second spliceosomal tra...
    GO:0030627 (F) pre-mRNA 5'-splice site...
    GO:0000244 (P) spliceosomal tri-snRNP ...
    GO:0000353 (P) formation of quadruple ...
    GO:0000245 (P) spliceosomal complex as...
    GO:0000350 (P) generation of catalytic...
    GO:0000395 (P) mRNA 5'-splice site rec...
    GO:0000398 (P) mRNA splicing, via spli...
    GO:0034403 (P) alignment of 3' and 5' ...
    GO:0005682 (C) U5 snRNP
    GO:0046540 (C) U4/U6 x U5 tri-snRNP co...    		 URS000053F313 RF00020 Saccharomyces
    cerevisiae
    S288C
    559292    		 30879786 Assembly1
    rna:B:-12~79 96~100
    rna:E:1~103 98~100
    6613 6j6n:E
    (3.86Å)
    		 103 GO:0030621 (F) U4 snRNA binding
    GO:0017069 (F) snRNA binding
    GO:0000244 (P) spliceosomal tri-snRNP ...
    GO:0000353 (P) formation of quadruple ...
    GO:0000350 (P) generation of catalytic...
    GO:0000388 (P) spliceosome conformatio...
    GO:0000398 (P) mRNA splicing, via spli...
    GO:0005688 (C) U6 snRNP
    GO:0046540 (C) U4/U6 x U5 tri-snRNP co...    		 URS00006184A9 RF00026 Saccharomyces
    cerevisiae
    S288C
    559292    		 30879786 Assembly1
    rna:B:-12~79 45~51,58,77,79
    rna:D:1~183 72~73,75
    rna:L:1~1169 53,55~56,58~62,88,92~101
    6614 6j6n:L
    (3.86Å)
    		 205 GO:0045131 (F) pre-mRNA branch point b...
    GO:0030627 (F) pre-mRNA 5'-splice site...
    GO:0000348 (P) mRNA branch site recogn...
    GO:0000395 (P) mRNA 5'-splice site rec...
    GO:0000398 (P) mRNA splicing, via spli...
    GO:0005686 (C) U2 snRNP    		 URS000023C730 RF00004 Saccharomyces
    cerevisiae
    S288C
    559292    		 30879786 Assembly1
    rna:B:-12~79 32~39,42~44
    rna:E:1~103 4~13,16~17,21~23,26~29
    6615 6j6q:B
    (3.7Å)
    		 57 N/A N/A N/A Saccharomyces
    cerevisiae
    S288C
    559292    		 30879786 Assembly1
    rna:D:1~183 -4~0
    rna:E:1~103 -1~1,3~8,70
    rna:L:1~1169 2,55~63,65~69,71~73
    6616 6j6q:D
    (3.7Å)
    		 179 GO:0000386 (F) second spliceosomal tra...
    GO:0030627 (F) pre-mRNA 5'-splice site...
    GO:0000244 (P) spliceosomal tri-snRNP ...
    GO:0000353 (P) formation of quadruple ...
    GO:0000245 (P) spliceosomal complex as...
    GO:0000350 (P) generation of catalytic...
    GO:0000395 (P) mRNA 5'-splice site rec...
    GO:0000398 (P) mRNA splicing, via spli...
    GO:0034403 (P) alignment of 3' and 5' ...
    GO:0005682 (C) U5 snRNP
    GO:0046540 (C) U4/U6 x U5 tri-snRNP co...    		 URS000053F313 RF00020 Saccharomyces
    cerevisiae
    S288C
    559292    		 30879786 Assembly1
    rna:B:-12~79 96~100
    rna:E:1~103 98~100
    6617 6j6q:E
    (3.7Å)
    		 103 GO:0030621 (F) U4 snRNA binding
    GO:0017069 (F) snRNA binding
    GO:0000244 (P) spliceosomal tri-snRNP ...
    GO:0000353 (P) formation of quadruple ...
    GO:0000350 (P) generation of catalytic...
    GO:0000388 (P) spliceosome conformatio...
    GO:0000398 (P) mRNA splicing, via spli...
    GO:0005688 (C) U6 snRNP
    GO:0046540 (C) U4/U6 x U5 tri-snRNP co...    		 URS00006184A9 RF00026 Saccharomyces
    cerevisiae
    S288C
    559292    		 30879786 Assembly1
    rna:B:-12~79 45,47~51,59,77~79
    rna:D:1~183 72~73,75
    rna:L:1~1169 53,55~62,88,92~102
    6618 6j6q:L
    (3.7Å)
    		 210 GO:0045131 (F) pre-mRNA branch point b...
    GO:0030627 (F) pre-mRNA 5'-splice site...
    GO:0000348 (P) mRNA branch site recogn...
    GO:0000395 (P) mRNA 5'-splice site rec...
    GO:0000398 (P) mRNA splicing, via spli...
    GO:0005686 (C) U2 snRNP    		 URS000023C730 RF00004 Saccharomyces
    cerevisiae
    S288C
    559292    		 30879786 Assembly1
    rna:B:-12~79 32~39,41~44,46~48
    rna:E:1~103 4~13,17,21~23,26~29
    6619 6jbf:A
    (2.6Å)
    		 23 N/A URS000080DDE4 N/A synthetic
    construct
    32630    		 N/A Assembly1
    rna:B:24 1,3~23
    6620 6jbf:B
    (2.6Å)
    		 23 N/A URS000080DDE4 N/A synthetic
    construct
    32630    		 N/A Assembly1
    rna:A:1~23 24,26~39,41~46
    6621 6jbf:C
    (2.6Å)
    		 23 N/A URS000080DDE4 N/A synthetic
    construct
    32630    		 N/A Assembly2
    rna:D:70~92 49~69
    6622 6jbf:D
    (2.6Å)
    		 23 N/A URS000080DDE4 N/A synthetic
    construct
    32630    		 N/A Assembly2
    rna:C:47~69 72~92
    6623 6jbg:A
    (3.1Å)
    		 22 N/A URS0001A16A93 N/A synthetic
    construct
    32630    		 N/A Assembly1
    rna:B:25 3~16,18~23
    6624 6jbg:B
    (3.1Å)
    		 22 N/A URS0001A16A93 N/A synthetic
    construct
    32630    		 N/A Assembly1
    rna:A:2~23 26~39,42~46
    6625 6jbg:C
    (3.1Å)
    		 23 N/A URS000080DDE4 N/A synthetic
    construct
    32630    		 N/A Assembly2
    rna:D:70~92 49~62,64~69
    6626 6jbg:D
    (3.1Å)
    		 23 N/A URS000080DDE4 N/A synthetic
    construct
    32630    		 N/A Assembly2
    rna:C:47~69 72~85,88~92
    6627 6jjh:B
    (1.74Å)
    		 14 N/A URS0001A16A80 N/A Pseudorabies
    virus
    Ea
    101947    		 32453431 Assembly1
    rna:B-2:1~14 1~2,5~7,9~10,12~14
    6628 6jji:B
    (3.1Å)
    		 14 N/A URS0001A16A80 N/A Pseudorabies
    virus
    Ea
    101947    		 32453431 Assembly1
    rna:B-2:1~14 1~2,5~7,9~10,12~14
    6629 6jq5:A
    (2.059Å)
    		 82 GO:0003824 (F) catalytic activity URS0000EEAD20 RF02678 synthetic
    construct
    32630    		 31088965 Assembly1
    rna:B:1~81 21~27,29~33,63~65,67~81
    6630 6jq5:B
    (2.059Å)
    		 81 GO:0003824 (F) catalytic activity URS0000EEAD20 RF02678 synthetic
    construct
    32630    		 31088965 Assembly1
    rna:A:1~82 21~27,29~30,63,66~75,77~81
    6631 6jq6:U
    (2.626Å)
    		 81 GO:0003824 (F) catalytic activity URS0000EEAD29 RF02678 synthetic
    construct
    32630    		 31088965 Assembly1
    rna:U-2:1~81 21~27,29~30,63,67~70,72~80
    6632 6k0a:X
    (4.6Å)
    		 258 EC:3.1.26.5 ribonuclease P
    GO:0004526 (F) ribonuclease P activity
    GO:0008033 (P) tRNA processing
    GO:0030681 (C) multimeric ribonuclease...    		 URS0000EEAD19 RF00373 Methanocaldococcus
    jannaschii
    2190    		 31197137 Assembly1
    rna:Y:-1~256 222~224
    6633 6k0a:Y
    (4.6Å)
    		 258 EC:3.1.26.5 ribonuclease P
    GO:0004526 (F) ribonuclease P activity
    GO:0008033 (P) tRNA processing
    GO:0030681 (C) multimeric ribonuclease...    		 URS0000EEAD19 RF00373 Methanocaldococcus
    jannaschii
    2190    		 31197137 Assembly1
    rna:X:-1~256 222~224
    6634 6k0b:U
    (4.3Å)
    		 83 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS0000EEAD1C RF00005 Escherichia
    coli
    562    		 31197137 Assembly1
    rna:X:-1~256 1~3,18,63,65,73~74,81~83
    6635 6k0b:V
    (4.3Å)
    		 83 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS0000EEAD1C RF00005 Escherichia
    coli
    562    		 31197137 Assembly1
    rna:Y:-1~256 1~3,18,63,65,73~74,81~83
    6636 6k0b:X
    (4.3Å)
    		 258 EC:3.1.26.5 ribonuclease P
    GO:0004526 (F) ribonuclease P activity
    GO:0008033 (P) tRNA processing
    GO:0030681 (C) multimeric ribonuclease...    		 URS0000EEAD19 RF00373 Methanocaldococcus
    jannaschii
    2190    		 31197137 Assembly1
    rna:U:1~83 40~42,72,92~93,163,191,200~201
    ,241~242
    rna:Y:-1~256 222~224
    6637 6k0b:Y
    (4.3Å)
    		 258 EC:3.1.26.5 ribonuclease P
    GO:0004526 (F) ribonuclease P activity
    GO:0008033 (P) tRNA processing
    GO:0030681 (C) multimeric ribonuclease...    		 URS0000EEAD19 RF00373 Methanocaldococcus
    jannaschii
    2190    		 31197137 Assembly1
    rna:X:-1~256 222~224
    rna:V:1~83 40~42,72,92~93,163,191,200~201
    ,241~242
    6638 6ke6:3A
    (3.4Å)
    		 175 GO:0006396 (P) RNA processing
    GO:0005730 (C) nucleolus    		 URS0000B21E09 RF01846 Saccharomyces
    cerevisiae
    S288C
    559292    		 N/A Assembly1
    rna:5A:2~591 39~55,62~73
    rna:SA:-6~1791 1~13,15~22,25~28
    6639 6ke6:5A
    (3.4Å)
    		 522 GO:0034463 (P) 90S preribosome assembly URS000007769E N/A Saccharomyces
    cerevisiae
    S288C
    559292    		 N/A Assembly1
    rna:3A:1~333 281~292,462~468,470~479
    6640 6ke6:SA
    (3.4Å)
    		 1310 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000BC4691 RF01960 Saccharomyces
    cerevisiae
    S288C
    559292    		 N/A Assembly1
    rna:3A:1~333 5,7~17,1111~1117,1119~1125
    6641 6kuj:R
    (3.4Å)
    		 10 N/A URS0000EEAD27 N/A synthetic
    construct
    32630    		 31209309 Assembly1
    rna:V:1~13 1~2
    6642 6kuj:V
    (3.4Å)
    		 13 N/A URS000197CF50 N/A synthetic
    construct
    32630    		 31209309 Assembly1
    rna:R:1~10 12~13
    6643 6kuk:V
    (3.9Å)
    		 15 N/A URS0000EEAD24 N/A synthetic
    construct
    32630    		 31209309
    31209309    		 Assembly1
    rna:R:1~8 11~15
    6644 6kup:V
    (4.3Å)
    		 15 N/A URS0000EEAD24 N/A synthetic
    construct
    32630    		 31209309
    31209309    		 Assembly1
    rna:R:1~8 11~15
    6645 6kur:R
    (3.7Å)
    		 13 N/A URS0000EEACFF N/A synthetic
    construct
    32630    		 31209309
    31209309    		 Assembly1
    rna:V:1~15 1~5
    6646 6kur:V
    (3.7Å)
    		 15 N/A URS0000EEAD24 N/A synthetic
    construct
    32630    		 31209309
    31209309    		 Assembly1
    rna:R:1~13 11~15
    6647 6kut:R
    (4.1Å)
    		 12 N/A URS0000EEACFF N/A synthetic
    construct
    32630    		 31209309
    31209309    		 Assembly1
    rna:V:1~15 1~5
    6648 6kut:V
    (4.1Å)
    		 15 N/A URS0000EEAD24 N/A synthetic
    construct
    32630    		 31209309
    31209309    		 Assembly1
    rna:R:1~12 11~15
    6649 6kuu:R
    (4.0Å)
    		 12 N/A URS0000EEACFF N/A synthetic
    construct
    32630    		 31209309 Assembly1
    rna:V:1~15 1~5
    6650 6kuu:V
    (4.0Å)
    		 15 N/A URS0000EEAD24 N/A synthetic
    construct
    32630    		 31209309 Assembly1
    rna:R:1~12 11~15
    6651 6kuv:R
    (4.1Å)
    		 10 N/A URS0000EEAD27 N/A synthetic
    construct
    32630    		 31209309
    31209309    		 Assembly1
    rna:V:1~13 1~2
    6652 6kuv:V
    (4.1Å)
    		 13 N/A URS0000EEACF8 N/A synthetic
    construct
    32630    		 31209309
    31209309    		 Assembly1
    rna:R:1~10 12~13
    6653 6kwq:B
    (1.76Å)
    		 31 N/A URS0001A16A92 N/A synthetic
    construct
    32630    		 31863580 Assembly1
    rna:C:691~701 601~611
    6654 6kwq:C
    (1.76Å)
    		 11 N/A URS000080E152 N/A synthetic
    construct
    32630    		 31863580 Assembly1
    rna:B:581~611 691~701
    6655 6kwr:B
    (2.5Å)
    		 28 N/A URS0001A16A92 N/A synthetic
    construct
    32630    		 31863580 Assembly1
    rna:C:695~701 601~608
    6656 6l0y:A
    (3.0Å)
    		 22 N/A URS00021ED999 N/A synthetic
    construct
    32630    		 N/A Assembly1
    rna:A-2:1~22 1~22
    6657 6l0y:B
    (3.0Å)
    		 22 N/A URS00021ED999 N/A synthetic
    construct
    32630    		 N/A Assembly2
    rna:B-3:1~22 1~22
    6658 6lkq:s
    (3.1Å)
    		 1532 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0001A24B52 RF00177 Escherichia
    coli
    562    		 32341159 Assembly1
    rna:t:1~2903 702,1407~1409,1418~1420,1429,1
    473~1475,1483~1485,1494~1496,1
    517
    rna:w:15~20 789~791,926,1400,1493,1498
    6659 6lkq:t
    (3.1Å)
    		 2850 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E25C RF02541 Escherichia
    coli
    562    		 32341159 Assembly1
    rna:s:2~1533 1689,1700~1704,1846~1847,1912~
    1916,1919~1920,1947~1950,1959~
    1961
    rna:u:2~119 861~864,915,917~919,958
    6660 6lkq:u
    (3.1Å)
    		 118 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000366A67 RF00001 Escherichia
    coli
    562    		 32341159 Assembly1
    rna:t:1~2903 78~81,89~90,96~97,99~100
    6661 6lqm:2
    (3.09Å)
    		 3532 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000E60B81 RF02543 Homo
    sapiens
    9606    		 32669547
    M054_0.6

    1306

    769

    1302

    1303

    762

    872

    1148

    1149

    764

    167

    21

    930

    1029

    1075

    1072

    1073

    s77

    1071

    819

    1373

    938

    1375

    s52

    s51

    s50

    931

    813

    936

    s59

    995

    994

    1314

    991

    1312

    1311

    1028

    1150

    123

    124

    125

    1068

    s72

    1060

    s100

    s102

    52

    533

    M227_0.6

    1384

    375

    926

    822

    1128

    988

    1321

    1083

    705

    1328

    707

    1124

    987

    703

    1237

    83

    1181

    797

    796

    795

    836

    837

    791

    790

    838

    1331

    s70

    1016

    1017

    1393

    610

    1012

    1013

    1236

    M290_0.6

    763

    1231

    1232

    1233

    1335

    1334

    M109_0.6

    1336

    1238

    1333

    589

    776

    M273_0.6

    s99

    1389

    902

    821

    900

    901

    906

    33

    924

    s17

    970

    M044_0.6

    1245

    s62

    s96

    1227

    883

    M035_0.6

    1223

    604

    M320_0.6

    1347

    60

    s81

    M349_0.6

    595

    175

    1026

    100

    s61

    977

    976

    974

    853

    M154_0.6

    884

    s55

    979

    M153_0.6

    183

    185

    546

    815

    1036

    503

    1034

    1035

    1212

    M102_0.6

    1216

    1042

    986

    1354

    708

    M103_0.6

    169

    91

    1127

    M070_0.6

    M272_0.6

    M020_0.6

    M050_0.6

    1187

    1182

    1183

    1037

    727

    M347_0.6

    722

    935

    M086_0.6

    1164

    1165

    1166

    606

    886

    156

    748

    749

    608

    M061_0.6

    s48

    1055

    878

    879

    1059

    953

    952

    42

    954

    870

    1107

    1352

    774

    1215

    M104_0.6

    1173

    770

    773

    958

    1271

    1272

    1273

    779

    778

    1178

    M151_0.6

    78

    1285

    M083_0.6

    1041

    1040

    1043

    1045

    1044

    706

    1360

    684

    800

    1368    		 Assembly1
    rna:5:1~120 1736~1738,1741,1792,1794~1795,
    1894,1909,1936,1942
    rna:8:1~156 2~22,58,193,339,342~348,350~35
    3,356~357,360,362,379~380,415~
    430,1305,1333~1334,1371,2308~2
    309,2312,2333~2334,2355,2444,2
    472,2508,2542,2544~2545,2778~2
    780
    6662 6lqm:5
    (3.09Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000002B0D5 RF00001 Homo
    sapiens
    9606    		 32669547
    931

    1290

    s51

    879    		 Assembly1
    rna:2:1~5069 77~79,84,88,98,100~101,103~104
    6663 6lqm:8
    (3.09Å)
    		 156 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B2C76 RF00002 Homo
    sapiens
    9606    		 32669547
    1227

    592

    s24

    993

    1215

    1352

    s37

    1238

    1178

    M085_0.6

    1389

    1360

    589

    375

    M106_0.6    		 Assembly1
    rna:2:1~5069 4~22,24~37,40~41,53,68,103,108
    ,111~113,124,126,128,135~136,1
    38~149,151~156
    6664 6lqp:3A
    (3.2Å)
    		 175 GO:0006396 (P) RNA processing
    GO:0005730 (C) nucleolus    		 URS0000B21E09 RF01846 Saccharomyces
    cerevisiae
    S288C
    559292    		 32943522 Assembly1
    rna:5A:2~591 39~55,62~73
    rna:SA:-7~1791 1~13,15~22,25~28
    6665 6lqp:5A
    (3.2Å)
    		 523 GO:0034463 (P) 90S preribosome assembly URS000007769E N/A Saccharomyces
    cerevisiae
    S288C
    559292    		 32943522 Assembly1
    rna:3A:1~333 281~292,462~468,470~479
    6666 6lqp:SA
    (3.2Å)
    		 1325 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00021ED968 RF01960 Saccharomyces
    cerevisiae
    S288C
    559292    		 32943522 Assembly1
    rna:3A:1~333 5,7~17,1111~1117,1119~1125
    6667 6lqq:3A
    (4.1Å)
    		 175 GO:0006396 (P) RNA processing
    GO:0005730 (C) nucleolus    		 URS0000B21E09 RF01846 Saccharomyces
    cerevisiae
    S288C
    559292    		 32943522 Assembly1
    rna:5A:2~591 39~53,62~73
    rna:SA:-7~1791 1~13,15~22,25~28
    6668 6lqq:5A
    (4.1Å)
    		 375 GO:0034463 (P) 90S preribosome assembly URS000007769E N/A Saccharomyces
    cerevisiae
    S288C
    559292    		 32943522 Assembly1
    rna:3A:1~333 281~292,464~468,470~479
    6669 6lqq:SA
    (4.1Å)
    		 1323 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00021ED968 RF01960 Saccharomyces
    cerevisiae
    S288C
    559292    		 32943522 Assembly1
    rna:3A:1~333 5,7~17,1111~1117,1119~1125
    6670 6lqr:3A
    (8.6Å)
    		 175 GO:0006396 (P) RNA processing
    GO:0005730 (C) nucleolus    		 URS0000B21E09 RF01846 Saccharomyces
    cerevisiae
    S288C
    559292    		 32943522 Assembly1
    rna:5A:2~591 39~53,62~73
    rna:SA:-7~1801 1~13,15~22,25~28
    6671 6lqr:5A
    (8.6Å)
    		 192 GO:0034463 (P) 90S preribosome assembly URS000007769E N/A Saccharomyces
    cerevisiae
    S288C
    559292    		 32943522 Assembly1
    rna:3A:1~333 281~292,464~468,470~479
    6672 6lqr:SA
    (8.6Å)
    		 1283 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00021ED94D RF01960 Saccharomyces
    cerevisiae
    S288C
    559292    		 32943522 Assembly1
    rna:3A:1~333 5,7~17,1111~1117,1119~1125
    6673 6lqs:3A
    (3.8Å)
    		 234 GO:0006396 (P) RNA processing
    GO:0005730 (C) nucleolus    		 URS0000B21E09 RF01846 Saccharomyces
    cerevisiae
    S288C
    559292    		 32943522 Assembly1
    rna:5A:2~591 38~54,62~73
    rna:SA:-7~1801 1~13,15~22,25~28
    6674 6lqs:5A
    (3.8Å)
    		 152 GO:0034463 (P) 90S preribosome assembly URS000007769E N/A Saccharomyces
    cerevisiae
    S288C
    559292    		 32943522 Assembly1
    rna:3A:1~333 281~292,464~468,470~479,482
    6675 6lqs:SA
    (3.8Å)
    		 1249 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00021ED94D RF01960 Saccharomyces
    cerevisiae
    S288C
    559292    		 32943522 Assembly1
    rna:3A:1~333 5,7~16,1111~1117,1119~1126
    6676 6lqt:3A
    (4.9Å)
    		 194 GO:0006396 (P) RNA processing
    GO:0005730 (C) nucleolus    		 URS0000B21E09 RF01846 Saccharomyces
    cerevisiae
    S288C
    559292    		 32943522 Assembly1
    rna:5A:2~591 38~54,62~73
    rna:SA:-7~1801 1~13,15~22,25~28
    6677 6lqt:5A
    (4.9Å)
    		 152 GO:0034463 (P) 90S preribosome assembly URS000007769E N/A Saccharomyces
    cerevisiae
    S288C
    559292    		 32943522 Assembly1
    rna:3A:1~333 281~292,464~468,470~479,482
    6678 6lqt:SA
    (4.9Å)
    		 1155 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00021ED94D RF01960 Saccharomyces
    cerevisiae
    S288C
    559292    		 32943522 Assembly1
    rna:3A:1~333 5,7~16,1111~1117,1119~1126
    6679 6lqu:3A
    (3.7Å)
    		 175 GO:0006396 (P) RNA processing
    GO:0005730 (C) nucleolus    		 URS0000B21E09 RF01846 Saccharomyces
    cerevisiae
    S288C
    559292    		 32943522 Assembly1
    rna:5A:2~591 39~55,62~73
    rna:SA:-7~1791 1~13,15~22,25~28
    6680 6lqu:5A
    (3.7Å)
    		 523 GO:0034463 (P) 90S preribosome assembly URS000007769E N/A Saccharomyces
    cerevisiae
    S288C
    559292    		 32943522 Assembly1
    rna:3A:1~333 281~292,462~468,470~479
    6681 6lqu:SA
    (3.7Å)
    		 1242 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00021ED968 RF01960 Saccharomyces
    cerevisiae
    S288C
    559292    		 32943522 Assembly1
    rna:3A:1~333 5,7~17,1111~1117,1119~1125
    6682 6lqv:3A
    (4.8Å)
    		 175 GO:0006396 (P) RNA processing
    GO:0005730 (C) nucleolus    		 URS0000B21E09 RF01846 Saccharomyces
    cerevisiae
    S288C
    559292    		 32943522 Assembly1
    rna:5A:2~591 39~53,62~73
    rna:SA:-7~1758 1~13,15~22,25~28
    6683 6lqv:5A
    (4.8Å)
    		 171 GO:0034463 (P) 90S preribosome assembly URS000007769E N/A Saccharomyces
    cerevisiae
    S288C
    559292    		 32943522 Assembly1
    rna:3A:1~333 281~292,464~468,470~479
    6684 6lqv:SA
    (4.8Å)
    		 950 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00021ED968 RF01960 Saccharomyces
    cerevisiae
    S288C
    559292    		 32943522 Assembly1
    rna:3A:1~333 5,7~17,1111~1117,1119~1125
    6685 6lsf:B
    (2.152Å)
    		 10 N/A URS000080DEB1 N/A synthetic
    construct
    32630    		 32451382 Assembly1
    rna:C:693~701 601~608
    6686 6lsg:B
    (2.14Å)
    		 10 N/A URS000080DEB1 N/A synthetic
    construct
    32630    		 32451382 Assembly1
    rna:C:694~701 601~609
    6687 6lsh:B
    (2.231Å)
    		 10 N/A URS0001A24B4D N/A synthetic
    construct
    32630    		 32451382 Assembly1
    rna:C:693~701 601~609
    6688 6lsr:2
    (3.13Å)
    		 3482 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000E60B81 RF02543 Homo
    sapiens
    9606    		 32669547
    M054_0.6

    1306

    769

    706

    1303

    762

    872

    1148

    1149

    764

    167

    21

    930

    1029

    1075

    1072

    1073

    s77

    1071

    819

    1373

    938

    546

    s52

    s51

    s50

    931

    813

    814

    936

    s59

    995

    994

    1314

    991

    1312

    1311

    1028

    1150

    123

    124

    125

    1068

    s72

    1060

    s100

    s102

    52

    533

    M227_0.6

    1384

    375

    925

    926

    822

    1128

    1323

    988

    1321

    1083

    705

    1328

    707

    1124

    987

    703

    1237

    83

    1181

    797

    796

    795

    836

    837

    791

    790

    838

    1331

    s70

    1016

    1017

    1393

    610

    1012

    1013

    1236

    M290_0.6

    763

    1231

    1232

    1233

    1335

    1334

    M109_0.6

    1336

    1238

    1333

    589

    776

    M273_0.6

    s99

    1389

    902

    821

    900

    901

    906

    33

    924

    s17

    970

    M044_0.6

    1245

    s62

    s96

    1227

    883

    M035_0.6

    1223

    604

    M320_0.6

    1347

    60

    s81

    M349_0.6

    595

    175

    1026

    100

    s61

    977

    976

    974

    853

    M154_0.6

    884

    s55

    979

    M153_0.6

    183

    185

    1375

    815

    1036

    503

    1034

    1035

    1212

    M102_0.6

    1211

    1216

    1214

    1042

    986

    1354

    708

    M103_0.6

    169

    91

    1127

    M070_0.6

    M272_0.6

    M020_0.6

    M050_0.6

    1187

    1182

    1183

    1037

    727

    M347_0.6

    722

    935

    M086_0.6

    1164

    1165

    1166

    606

    886

    156

    748

    749

    608

    M061_0.6

    s48

    1055

    878

    879

    1059

    953

    952

    42

    954

    870

    871

    1352

    774

    1215

    M104_0.6

    1173

    770

    773

    958

    1271

    1272

    1273

    779

    778

    1178

    M151_0.6

    78

    1285

    M083_0.6

    1041

    1040

    1043

    1045

    1044

    1360

    684

    800

    1368

    1107    		 Assembly1
    rna:5:1~120 1736~1738,1792,1794~1795,1894,
    1909,1936,1941~1942
    rna:8:1~156 1~22,58,339,341~348,350~353,35
    6~357,360,362,379~380,415~419,
    421~430,1304~1305,1333~1334,13
    71,2308~2309,2313,2333,2355,24
    44~2445,2493~2494,2542~2544,27
    78~2779,3890
    6689 6lsr:5
    (3.13Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000002B0D5 RF00001 Homo
    sapiens
    9606    		 32669547
    931

    1290

    s51

    879    		 Assembly1
    rna:2:1~5069 77~79,84,88,98,100~101
    6690 6lsr:8
    (3.13Å)
    		 155 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B2C76 RF00002 Homo
    sapiens
    9606    		 32669547
    1227

    592

    s24

    993

    1215

    1352

    s37

    1238

    1178

    M085_0.6

    1389

    1360

    589

    375

    M106_0.6    		 Assembly1
    rna:2:1~5069 3~13,15~22,24~37,40~41,53~54,1
    03,110,112~113,115,125~126,128
    ,136,138~149,151~156
    6691 6lss:2
    (3.23Å)
    		 3474 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000E60B81 RF02543 Homo
    sapiens
    9606    		 32669547
    M054_0.6

    1306

    769

    706

    1303

    762

    872

    1148

    1149

    764

    167

    21

    930

    1029

    1075

    1072

    1073

    s77

    1071

    819

    1373

    938

    546

    s52

    s50

    931

    813

    936

    s59

    995

    994

    595

    1314

    991

    1312

    1311

    1028

    1150

    123

    124

    125

    1068

    s72

    1060

    s100

    s102

    52

    533

    M227_0.6

    1384

    375

    926

    822

    1128

    988

    1321

    708

    705

    1328

    707

    1124

    987

    703

    M077_0.6

    1237

    83

    1181

    797

    796

    795

    836

    M106_0.6

    791

    790

    838

    1334

    s70

    1016

    1017

    1393

    610

    1012

    1013

    1236

    M290_0.6

    763

    1231

    1232

    1233

    1335

    1331

    M109_0.6

    1336

    1238

    1333

    589

    776

    s96

    s99

    M273_0.6

    1389

    902

    821

    900

    901

    906

    33

    924

    s17

    970

    M044_0.6

    1245

    s62

    s61

    1227

    883

    M035_0.6

    1223

    M156_0.6

    604

    M320_0.6

    1347

    60

    s81

    M349_0.6

    1083

    175

    1026

    100

    977

    976

    974

    853

    M154_0.6

    884

    s55

    979

    M153_0.6

    183

    185

    1375

    815

    78

    1036

    503

    1034

    1035

    1212

    M102_0.6

    1216

    1042

    986

    1354

    M103_0.6

    169

    91

    1127

    M070_0.6

    M272_0.6

    M020_0.6

    M050_0.6

    1187

    1182

    1183

    1037

    727

    M347_0.6

    722

    935

    M086_0.6

    1164

    1165

    1166

    606

    886

    156

    748

    749

    608

    M061_0.6

    s48

    1055

    878

    879

    1059

    953

    952

    42

    954

    870

    1107

    1352

    774

    1215

    M104_0.6

    1173

    770

    773

    958

    1271

    1272

    1273

    779

    778

    1178

    M151_0.6

    837

    1285

    M083_0.6

    1041

    1040

    1043

    1045

    1044

    1360

    684

    800

    1368    		 Assembly1
    rna:5:1~120 1736~1738,1792,1794~1795,1909,
    1936,1941~1942
    rna:8:1~156 2~22,58,146,339,341~348,350~35
    3,356~357,360,362,379~380,415~
    430,1304~1305,1333~1334,1371,2
    308~2309,2312,2333,2355~2356,2
    444,2472,2488,2493,2542,2544,2
    778~2779
    6692 6lss:5
    (3.23Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000002B0D5 RF00001 Homo
    sapiens
    9606    		 32669547
    931

    1290

    s51

    879    		 Assembly1
    rna:2:1~5069 77~79,84,88,98,100~101
    6693 6lss:8
    (3.23Å)
    		 156 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B2C76 RF00002 Homo
    sapiens
    9606    		 32669547
    1227

    592

    s24

    993

    1215

    1352

    s37

    1238

    1178

    M085_0.6

    1389

    1360

    589

    375

    M106_0.6    		 Assembly1
    rna:2:1~5069 4~22,24~37,40~41,53~54,103,108
    ,110~113,115,124~128,138~149,1
    51~156
    6694 6ltp:B
    (3.4Å)
    		 42 N/A URS00021ED927 N/A synthetic
    construct
    32630    		 33067443 Assembly1
    rna:H:1~51 44~48,50~51
    6695 6ltp:H
    (3.4Å)
    		 42 N/A URS00021ED927 N/A synthetic
    construct
    32630    		 33067443 Assembly1
    rna:B:1~51 44~48,50~51
    6696 6lu8:2
    (3.13Å)
    		 3477 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000E60B81 RF02543 Homo
    sapiens
    9606    		 32669547
    M054_0.6

    1306

    769

    1302

    1303

    762

    872

    1148

    1149

    764

    492

    167

    21

    930

    1029

    1075

    1072

    1073

    s77

    1071

    819

    1373

    938

    546

    s52

    s50

    931

    813

    936

    s59

    995

    994

    595

    1314

    991

    1312

    1311

    1028

    1150

    123

    124

    125

    1068

    s72

    1060

    s100

    s102

    52

    533

    M227_0.6

    1384

    375

    926

    822

    1128

    988

    1321

    708

    705

    1328

    707

    1124

    987

    703

    1237

    83

    1181

    797

    796

    795

    836

    837

    791

    790

    838

    1334

    s70

    1016

    1017

    1393

    610

    1012

    1013

    1236

    M290_0.6

    763

    1231

    1232

    1233

    1335

    1331

    M109_0.6

    1336

    1238

    1333

    589

    776

    s96

    s99

    M273_0.6

    1389

    902

    821

    900

    901

    906

    33

    924

    s17

    970

    M044_0.6

    1245

    s62

    s61

    1227

    883

    M035_0.6

    1223

    604

    M320_0.6

    1347

    60

    s81

    M349_0.6

    1083

    175

    1026

    100

    977

    976

    974

    853

    M154_0.6

    884

    s55

    979

    M153_0.6

    183

    185

    1375

    815

    1036

    503

    1034

    1035

    1212

    M102_0.6

    1216

    1042

    986

    1354

    M103_0.6

    169

    91

    1127

    M070_0.6

    M272_0.6

    M020_0.6

    M050_0.6

    1187

    1182

    1183

    1037

    727

    M347_0.6

    722

    935

    M086_0.6

    1164

    1165

    1166

    606

    886

    156

    748

    749

    608

    M061_0.6

    s48

    1055

    878

    879

    1059

    953

    952

    42

    954

    870

    1107

    1352

    774

    1215

    M104_0.6

    1173

    770

    773

    958

    1271

    1272

    1273

    779

    778

    1178

    M151_0.6

    78

    1285

    M083_0.6

    1041

    1040

    1043

    1045

    1044

    706

    1360

    684

    800

    1368    		 Assembly1
    rna:5:1~120 1736~1738,1792,1794~1795,1894,
    1909,1936,1941~1942
    rna:8:1~156 2~22,58,146,339,341~348,350~35
    3,356~357,360,362,379~380,415~
    430,1304~1305,1333~1334,1371,2
    308~2309,2312,2333~2334,2355,2
    444,2472,2488,2493,2542~2544,2
    778~2780,3890
    6697 6lu8:5
    (3.13Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000002B0D5 RF00001 Homo
    sapiens
    9606    		 32669547
    931

    1290

    s51

    879    		 Assembly1
    rna:2:1~5069 77~79,84,88,98,100~102
    6698 6lu8:8
    (3.13Å)
    		 156 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B2C76 RF00002 Homo
    sapiens
    9606    		 32669547
    1227

    592

    s24

    993

    1215

    1352

    s37

    1238

    1178

    M085_0.6

    1389

    1360

    589

    375

    M106_0.6    		 Assembly1
    rna:2:1~5069 3~22,24~37,40~41,53,103,111~11
    3,115,124~128,135~136,138~149,
    151~156
    6699 6m62:1
    (3.2Å)
    		 2972 GO:0003735 (F) structural constituent ...
    GO:0006413 (P) translational initiation
    GO:0006414 (P) translational elongation
    GO:0006450 (P) regulation of translati...
    GO:0006457 (P) protein folding
    GO:0005840 (C) ribosome
    GO:0022625 (C) cytosolic large ribosom...    		 URS000061F377 RF02543 Saccharomyces
    cerevisiae
    S288C
    559292    		 32719344 Assembly1
    rna:2:1~158 3~23,59,143,330~337,339~342,34
    5~346,349,351,368~369,404~419,
    656~657,691,1394~1395,1398~139
    9,1419,1441,1530,1584,1830~183
    2,2386,2994~2995
    rna:6:1~232 1,3,1570
    6700 6m62:2
    (3.2Å)
    		 158 GO:0003735 (F) structural constituent ...
    GO:0002181 (P) cytoplasmic translation
    GO:0005840 (C) ribosome
    GO:0022625 (C) cytosolic large ribosom...    		 URS00001BF64E RF00002 Saccharomyces
    cerevisiae
    S288C
    559292    		 32719344 Assembly1
    rna:1:1~3396 1,3~22,24~33,35~37,40~41,53,10
    4,109,113~115,136~137,139~150,
    152~156
    << < 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 > >>
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    Reference:
  • Chengxin Zhang, Lydia Freddolino (2024) "FURNA: a database for function annotations of RNA structures," PLOS Biology 22(7): e3002476.