SEQ2FUN

FURNA
Download all results in tab-seperated text for 16611 RNAs.
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  • Hover over Ligand to view the name of the ligand and the ligand-binding nucleotides on the RNA.

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    # PDB
    (Resolution)    		 Length EC number
    & GO term     		RNAcentral Rfam Taxon PubMed ATtRACT
    motif     		Ligand &
    binding nucleotides
    6801 6n9f:2x
    (3.7Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    562    		 30520988 Assembly2
    rna:2A:6~2897 12~13,24,74~76
    rna:2a:4~1532 30~32,34,38~41
    rna:2v:14~19 34~37
    6802 6nd4:0
    (4.3Å)
    		 408 N/A URS0000EEACF1 N/A Saccharomyces
    cerevisiae
    BY4741
    1247190    		 31206356 Assembly1
    rna:2:23~333 281~292,462~468,470~479
    6803 6nd4:1
    (4.3Å)
    		 15 N/A N/A N/A Saccharomyces
    cerevisiae
    BY4741
    1247190    		 31206356 Assembly1
    rna:2:23~333 10~15
    6804 6nd4:2
    (4.3Å)
    		 146 GO:0006396 (P) RNA processing
    GO:0005730 (C) nucleolus    		 URS0000EEAD32 RF01846 Saccharomyces
    cerevisiae
    BY4741
    1247190    		 31206356 Assembly1
    rna:0:15~606 39~55,62~73
    rna:1:1~15 23~28
    6805 6nd5:1A
    (2.6Å)
    		 2871 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001698E8 RF02541 Thermus
    thermophilus
    HB8
    300852    		 30733327 Assembly1
    rna:1B:1~120 861~864,915,917~919,958
    rna:1a:4~1533 1689,1700~1704,1832,1836~1837,
    1846,1848,1912~1913,1915~1916,
    1919~1920,1947~1949,1959~1961,
    2863~2864
    rna:1w:1~76 882,896~897,1913,1942,2482~248
    3,2506~2507,2553,2555,2583~258
    5,2602
    rna:1x:2~76 1907~1909,1922~1924,2251~2253,
    2255,2439,2450~2451,2601~2602
    rna:1y:1~76 1851,2112,2169,2394~2395,2421~
    2422
    6806 6nd5:1B
    (2.6Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DEE8 RF00001 Thermus
    thermophilus
    HB8
    300852    		 30733327 Assembly1
    rna:1A:6~2897 78~81,90,97~102
    6807 6nd5:1a
    (2.6Å)
    		 1500 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DFED RF00177 Thermus
    thermophilus
    HB8
    300852    		 30733327 Assembly1
    rna:1A:6~2897 702,783~784,899~900,1407~1409,
    1418,1429,1442A,1473~1475,1483
    ~1484,1494~1496,1517
    rna:1v:12~24 530,926,1196,1397,1400~1401,14
    92~1493,1498,1503,1505,1507
    rna:1w:1~76 530,1054,1493
    rna:1x:2~76 790,966,1229~1230,1338~1340,14
    00
    6808 6nd5:1v
    (2.6Å)
    		 13 N/A N/A N/A Tequatrovirus
    T4
    10665    		 30733327 Assembly1
    rna:1a:4~1533 12~13,15~24
    rna:1w:1~76 19~21
    rna:1x:2~76 16~18
    6809 6nd5:1w
    (2.6Å)
    		 74 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    562    		 30733327 Assembly1
    rna:1A:6~2897 19,37~38,55~56,64,71,74~76
    rna:1a:4~1533 34~37
    rna:1v:12~24 34~37
    6810 6nd5:1x
    (2.6Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    562    		 30733327 Assembly1
    rna:1A:6~2897 2~3,11~13,24~25,74~76
    rna:1a:4~1533 29~32,34,38~41
    rna:1v:12~24 34~37
    6811 6nd5:1y
    (2.6Å)
    		 74 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    562    		 30733327 Assembly1
    rna:1A:6~2897 19,56,71~72,76
    rna:1x:2~76 35~36
    6812 6nd5:2A
    (2.6Å)
    		 2800 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001698E8 RF02541 Thermus
    thermophilus
    HB8
    300852    		 30733327 Assembly2
    rna:2B:1~120 861~864,915~919,958
    rna:2a:4~1532 1700~1704,1832,1836~1837,1846,
    1848,1912~1913,1915~1916,1919~
    1920,1947~1949,1959~1961,2863~
    2864
    rna:2w:2~76 881~882,897,1913,1916,2482~248
    3,2506~2507,2553~2555,2583~258
    5,2602
    rna:2x:2~76 1907~1909,1922~1924,2251~2253,
    2450~2451,2601~2602
    rna:2y:1~76 1851~1852,2112,2169,2394~2395,
    2421~2422
    6813 6nd5:2B
    (2.6Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DEE8 RF00001 Thermus
    thermophilus
    HB8
    300852    		 30733327 Assembly2
    rna:2A:6~2897 78~81,90,97~98,100~102
    6814 6nd5:2a
    (2.6Å)
    		 1503 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DFED RF00177 Thermus
    thermophilus
    HB8
    300852    		 30733327 Assembly2
    rna:2A:6~2897 702,783~784,899~900,1407~1409,
    1418,1429,1442A,1473~1475,1483
    ~1484,1493~1496,1517
    rna:2v:12~24 530,926,1196,1397,1400~1403,14
    92~1493,1498,1503,1505,1507
    rna:2w:2~76 530,1054,1493
    rna:2x:2~76 790,966,1229~1230,1338~1340,14
    00
    6815 6nd5:2v
    (2.6Å)
    		 13 N/A N/A N/A Tequatrovirus
    T4
    10665    		 30733327 Assembly2
    rna:2a:4~1532 13,15~24
    rna:2w:2~76 19~22
    rna:2x:2~76 16~18
    6816 6nd5:2w
    (2.6Å)
    		 72 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    562    		 30733327 Assembly2
    rna:2A:6~2897 12,19,37,55~56,64,74~76
    rna:2a:4~1532 34~37
    rna:2v:12~24 34~37
    6817 6nd5:2x
    (2.6Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    562    		 30733327 Assembly2
    rna:2A:6~2897 11~13,24~25,74~76
    rna:2a:4~1532 30~32,34,38~41
    rna:2v:12~24 34~37
    6818 6nd5:2y
    (2.6Å)
    		 73 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    562    		 30733327 Assembly2
    rna:2A:6~2897 19,56,71~72,76
    rna:2x:2~76 35~36
    6819 6nd6:1A
    (2.85Å)
    		 2871 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001698E8 RF02541 Thermus
    thermophilus
    HB8
    300852    		 30733327 Assembly1
    rna:1B:1~120 861~864,915,917~919,958
    rna:1a:4~1533 1689,1700~1704,1832,1836~1837,
    1846,1848,1912~1913,1915~1916,
    1919~1920,1947~1948,1959~1961,
    2863~2864
    rna:1w:1~76 882,897,1913,1916,1942,2470,24
    82~2483,2506~2508,2553,2555,25
    73,2583~2585,2602
    rna:1x:2~76 1907~1909,1922~1924,2251~2253,
    2450~2451,2601~2602
    rna:1y:1~76 1851,2112,2169,2394~2395,2421~
    2422
    6820 6nd6:1B
    (2.85Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DEE8 RF00001 Thermus
    thermophilus
    HB8
    300852    		 30733327 Assembly1
    rna:1A:6~2897 78~81,90,97~102
    6821 6nd6:1a
    (2.85Å)
    		 1500 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DFED RF00177 Thermus
    thermophilus
    HB8
    300852    		 30733327 Assembly1
    rna:1A:6~2897 702,783~784,899~900,1407~1409,
    1418,1429,1442A,1473~1475,1483
    ~1485,1494~1496,1517
    rna:1v:12~24 530,926,1196,1397,1400~1401,14
    93,1498,1503,1505,1507
    rna:1w:1~76 530,1054,1493
    rna:1x:2~76 790,966,1229~1230,1338~1340,14
    00
    6822 6nd6:1v
    (2.85Å)
    		 13 N/A N/A N/A Tequatrovirus
    T4
    10665    		 30733327 Assembly1
    rna:1a:4~1533 13,15~24
    rna:1w:1~76 19~22
    rna:1x:2~76 16~18
    6823 6nd6:1w
    (2.85Å)
    		 73 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00003179F7 RF00005 Escherichia
    coli
    562    		 30733327 Assembly1
    rna:1A:6~2897 12,19,37~38,55~56,64,71,74~76
    rna:1a:4~1533 34~37
    rna:1v:12~24 34~37
    6824 6nd6:1x
    (2.85Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    562    		 30733327 Assembly1
    rna:1A:6~2897 11~13,24~25,74~76
    rna:1a:4~1533 29~32,34,38,40~41
    rna:1v:12~24 34~37
    6825 6nd6:1y
    (2.85Å)
    		 74 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00003179F7 RF00005 Escherichia
    coli
    562    		 30733327 Assembly1
    rna:1A:6~2897 19,56,72,76
    6826 6nd6:2A
    (2.85Å)
    		 2800 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001698E8 RF02541 Thermus
    thermophilus
    HB8
    300852    		 30733327 Assembly2
    rna:2B:1~120 861~864,915,917~918,958
    rna:2a:4~1532 1689,1700~1704,1832,1836~1837,
    1846,1848,1912~1917,1919~1920,
    1947~1948,1959~1961,2863~2864
    rna:2w:1~76 881~882,896~897,1913,1916,1942
    ,2482~2483,2506~2507,2553,2555
    ,2583~2585,2602
    rna:2x:2~76 1907~1909,1922~1924,2064,2251~
    2253,2439,2450~2451,2601~2602
    rna:2y:1~76 1851,2112,2169,2394~2395,2421~
    2422
    6827 6nd6:2B
    (2.85Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DEE8 RF00001 Thermus
    thermophilus
    HB8
    300852    		 30733327 Assembly2
    rna:2A:6~2897 78~81,90,97~98,100~102
    6828 6nd6:2a
    (2.85Å)
    		 1503 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DFED RF00177 Thermus
    thermophilus
    HB8
    300852    		 30733327 Assembly2
    rna:2A:6~2897 702,783~784,899~900,1407~1410,
    1418,1429,1442A,1473~1475,1483
    ~1484,1493~1496,1517
    rna:2v:12~24 926,1397,1400~1402,1493,1498,1
    503,1505~1507
    rna:2w:1~76 530,1054,1493
    rna:2x:2~76 790,966,1229~1230,1338~1340
    rna:2y:1~76 693~695
    6829 6nd6:2v
    (2.85Å)
    		 13 N/A N/A N/A Tequatrovirus
    T4
    10665    		 30733327 Assembly2
    rna:2a:4~1532 12~13,15~19,22~23
    rna:2w:1~76 19~22
    rna:2x:2~76 16~18
    6830 6nd6:2w
    (2.85Å)
    		 73 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00003179F7 RF00005 Escherichia
    coli
    562    		 30733327 Assembly2
    rna:2A:6~2897 13,19,37,55~56,64,71,74~76
    rna:2a:4~1532 34~35,37
    rna:2v:12~24 34~37
    6831 6nd6:2x
    (2.85Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    562    		 30733327 Assembly2
    rna:2A:6~2897 11~13,24~25,74~76
    rna:2a:4~1532 30~32,34,38,40~41
    rna:2v:12~24 34~37
    6832 6nd6:2y
    (2.85Å)
    		 73 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00003179F7 RF00005 Escherichia
    coli
    562    		 30733327 Assembly2
    rna:2A:6~2897 19,56,72,76
    rna:2a:4~1532 37~38
    6833 6ndk:QA
    (3.64Å)
    		 1500 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DFED RF00177 Thermus
    thermophilus
    HB8
    300852    		 30782843 Assembly1
    rna:QV:1~76 790,966,1229~1230,1338~1340,14
    00
    rna:QX:16~23 530,926,1196,1397,1400~1402,14
    92~1493,1498,1505
    rna:QY:29~42 530,1054,1493
    rna:RA:6~2897 702,784,899,1407~1409,1418,142
    9~1430,1442B,1473~1475,1483~14
    85,1493~1496,1517
    6834 6ndk:QV
    (3.64Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    562    		 30782843 Assembly1
    rna:QA:4~1533 29~32,34,38~41
    rna:QX:16~23 34~37
    rna:RA:6~2897 12~13,24~25,74~76
    6835 6ndk:QY
    (3.64Å)
    		 14 N/A URS0000E60B7D N/A Salmonella
    enterica
    subsp.
    enterica
    serovar
    Typhimurium
    90371    		 30782843 Assembly1
    rna:QA:4~1533 34~35,37
    rna:QX:16~23 34~37
    rna:RA:6~2897 37~38
    6836 6ndk:RA
    (3.64Å)
    		 2870 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001698E8 RF02541 Thermus
    thermophilus
    HB8
    300852    		 30782843 Assembly1
    rna:QA:4~1533 1689,1700~1704,1831~1832,1836~
    1837,1846,1848,1912~1913,1916,
    1919~1920,1947~1948,1959~1961,
    2863~2864
    rna:QV:1~76 1907~1908,1922~1924,2063~2064,
    2251~2253,2439,2450~2451,2601~
    2602
    rna:RB:1~120 861~864,915,917~919,958
    rna:ZA:1~3 2451~2452,2506~2507,2553,2555,
    2583~2584,2602
    6837 6ndk:RB
    (3.64Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00005F2F4B RF00001 Thermus
    thermophilus
    HB8
    300852    		 30782843 Assembly1
    rna:RA:6~2897 78~81,88,90,98,100~102
    6838 6ndk:XA
    (3.64Å)
    		 1504 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DFED RF00177 Thermus
    thermophilus
    HB8
    300852    		 30782843 Assembly2
    rna:XV:1~76 790,966,1229~1230,1338~1340,14
    00
    rna:XX:13~23 530,693,926,1397,1400~1401,140
    3,1492~1493,1498,1506
    rna:XY:28~43 530,1054,1493
    rna:YA:6~2897 702,783~784,899~900,1407~1409,
    1418,1429~1430,1442B,1473~1475
    ,1483~1484,1494~1496,1517
    6839 6ndk:XV
    (3.64Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    562    		 30782843 Assembly2
    rna:XA:4~1533 29~32,34,38,40~41
    rna:XX:13~23 34~37
    rna:YA:6~2897 11~13,24~25,74~76
    6840 6ndk:XX
    (3.64Å)
    		 11 N/A N/A N/A Escherichia
    coli
    562    		 30782843 Assembly2
    rna:XA:4~1533 13,15~21,23
    rna:XV:1~76 16~18
    rna:XY:28~43 19~22
    6841 6ndk:XY
    (3.64Å)
    		 16 N/A URS0000E60B7D N/A Salmonella
    enterica
    subsp.
    enterica
    serovar
    Typhimurium
    90371    		 30782843 Assembly2
    rna:XA:4~1533 34~37
    rna:XX:13~23 34~37
    rna:YA:6~2897 37~38
    6842 6ndk:YA
    (3.64Å)
    		 2870 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001698E8 RF02541 Thermus
    thermophilus
    HB8
    300852    		 30782843 Assembly2
    rna:XA:4~1533 1689,1701~1704,1831~1832,1836~
    1837,1846,1848,1912,1915~1916,
    1919~1920,1947~1949,1959~1961,
    2863~2864
    rna:XV:1~76 1908~1909,1922~1924,2251~2252,
    2439,2450~2451,2601~2602
    rna:YB:1~120 861~864,915~918,958
    rna:ZB:1~3 2451,2505~2507,2553,2555,2573,
    2583~2584,2602
    6843 6ndk:YB
    (3.64Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00005F2F4B RF00001 Thermus
    thermophilus
    HB8
    300852    		 30782843 Assembly2
    rna:YA:6~2897 78~81,90,98,100~101
    6844 6nit:C
    (3.8Å)
    		 18 N/A URS000036142B N/A Homo
    sapiens
    9606    		 31353209
    M175_0.6    		 Assembly1
    rna:E:2~23 2~8,13~20
    6845 6nit:D
    (3.8Å)
    		 13 N/A URS000036142B N/A Homo
    sapiens
    9606    		 31353209
    M175_0.6    		 Assembly2
    rna:F:2~23 2~9,15
    6846 6nit:E
    (3.8Å)
    		 21 N/A URS0000EEACE8 N/A synthetic
    construct
    32630    		 31353209 Assembly1
    rna:C:1~20 2~9,14~20
    6847 6nit:F
    (3.8Å)
    		 20 N/A URS0000EEACE8 N/A synthetic
    construct
    32630    		 31353209 Assembly2
    rna:D:1~16 7,12~20
    6848 6nsh:QA
    (3.397Å)
    		 1511 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DFED RF00177 Thermus
    thermophilus
    HB8
    300852    		 33016876 Assembly1
    rna:RA:6~2897 702,784,899,1407~1409,1418,142
    9,1443,1473~1475,1483~1484,149
    2~1496,1517
    rna:QV:27~43 790,966,1229~1230,1338~1340,14
    00
    rna:QX:2~19 693,723,926,1400~1403,1498,150
    3,1505,1532~1537,1539,1541~154
    2
    6849 6nsh:QV
    (3.397Å)
    		 17 N/A URS00021ED980 N/A Escherichia
    coli
    562    		 33016876 Assembly1
    rna:QA:5~1542 30~31,34,38~42
    rna:QX:2~19 35~37
    6850 6nsh:QX
    (3.397Å)
    		 18 N/A N/A N/A Escherichia
    coli
    562    		 33016876 Assembly1
    rna:QA:5~1542 2,5,7~14,16~19
    rna:QV:27~43 17~19
    6851 6nsh:RA
    (3.397Å)
    		 2881 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001698E8 RF02541 Thermus
    thermophilus
    HB8
    300852    		 33016876 Assembly1
    rna:RB:1~119 861~864,915~919,958
    rna:QA:5~1542 1689,1700~1704,1832,1836~1837,
    1846,1848,1912~1914,1916,1919~
    1920,1947~1949,1959~1961,2863~
    2864
    6852 6nsh:RB
    (3.397Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00005F2F4B RF00001 Thermus
    thermophilus
    HB8
    300852    		 33016876 Assembly1
    rna:RA:6~2897 78~81,89A,97,99~100
    6853 6nsh:XA
    (3.397Å)
    		 1511 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DFED RF00177 Thermus
    thermophilus
    HB8
    300852    		 33016876 Assembly2
    rna:YA:6~2897 702,783~784,899,1407~1408,1418
    ,1429,1443,1473~1475,1483~1484
    ,1492~1496,1517
    rna:XV:28~42 790,966,1229~1230,1338~1340,14
    00
    rna:XX:1~19 693,723,789,926,1400~1401,1493
    ,1498,1505~1506,1533,1535,1537
    ~1542
    6854 6nsh:XV
    (3.397Å)
    		 15 N/A URS00021ED980 N/A Escherichia
    coli
    562    		 33016876 Assembly2
    rna:XA:5~1542 29~32,34,38,40~41
    rna:XX:1~19 35~37
    6855 6nsh:XX
    (3.397Å)
    		 19 N/A N/A N/A Escherichia
    coli
    562    		 33016876 Assembly2
    rna:XA:5~1542 1~2,4~10,13~19
    rna:XV:28~42 16~17
    6856 6nsh:YA
    (3.397Å)
    		 2883 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001698E8 RF02541 Thermus
    thermophilus
    HB8
    300852    		 33016876 Assembly2
    rna:YB:1~119 861~864,915,917~919,958
    rna:XA:5~1542 1689,1700~1704,1832,1836~1837,
    1846,1848,1912~1913,1916,1919~
    1920,1947~1948,1959~1961,2863~
    2864
    6857 6nsh:YB
    (3.397Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00005F2F4B RF00001 Thermus
    thermophilus
    HB8
    300852    		 33016876 Assembly2
    rna:YA:6~2897 78~81,89A,96~97,99~101
    6858 6nta:QA
    (3.1Å)
    		 1500 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DFED RF00177 Thermus
    thermophilus
    HB8
    300852    		 33016876 Assembly1
    rna:QV:27~43 790,966,1229~1230,1338~1340,14
    00
    rna:QX:10~19 693,788~789,926,1400,1402~1403
    ,1493,1498,1505~1506
    rna:RA:6~2897 702,784,899,1407~1408,1418,142
    9,1443,1473~1475,1483~1484,149
    2~1496,1517
    6859 6nta:QV
    (3.1Å)
    		 17 N/A URS00021ED980 N/A Escherichia
    coli
    562    		 33016876 Assembly1
    rna:QA:5~1531 30~32,34,38~42
    rna:QX:10~19 34~37
    6860 6nta:QX
    (3.1Å)
    		 10 N/A N/A N/A Escherichia
    coli
    562    		 33016876 Assembly1
    rna:QA:5~1531 13~19
    rna:QV:27~43 16~18
    6861 6nta:RA
    (3.1Å)
    		 2881 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001698E8 RF02541 Thermus
    thermophilus
    HB8
    300852    		 33016876 Assembly1
    rna:QA:5~1531 1689,1700~1704,1832,1836~1837,
    1846,1848,1912~1913,1916,1919~
    1920,1947~1948,1959~1961,2863~
    2864
    rna:RB:1~119 861~864,915~919,958
    6862 6nta:RB
    (3.1Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00005F2F4B RF00001 Thermus
    thermophilus
    HB8
    300852    		 33016876 Assembly1
    rna:RA:6~2897 78~81,89A,97,99~101
    6863 6nta:XA
    (3.1Å)
    		 1500 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DFED RF00177 Thermus
    thermophilus
    HB8
    300852    		 33016876 Assembly2
    rna:XV:28~42 790,966,1229,1338~1340,1400
    rna:XX:8~19 693,788~789,926,1400~1401,1493
    ,1498,1505~1506
    rna:YA:6~2897 702,783~784,899,1407~1409,1418
    ,1429,1443,1473~1475,1483~1484
    ,1492~1496,1517
    6864 6nta:XV
    (3.1Å)
    		 15 N/A URS00021ED980 N/A Escherichia
    coli
    562    		 33016876 Assembly2
    rna:XA:5~1531 30~32,34,38~41
    rna:XX:8~19 34~37
    6865 6nta:XX
    (3.1Å)
    		 12 N/A N/A N/A Escherichia
    coli
    562    		 33016876 Assembly2
    rna:XA:5~1531 13~19
    rna:XV:28~42 16~18
    6866 6nta:YA
    (3.1Å)
    		 2883 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001698E8 RF02541 Thermus
    thermophilus
    HB8
    300852    		 33016876 Assembly2
    rna:XA:5~1531 1689,1700~1704,1832,1836~1837,
    1846,1848,1912~1913,1915~1916,
    1919~1920,1947~1948,1959~1961,
    2863~2864
    rna:YB:1~119 861~864,915,917~919,958
    6867 6nta:YB
    (3.1Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00005F2F4B RF00001 Thermus
    thermophilus
    HB8
    300852    		 33016876 Assembly2
    rna:YA:6~2897 78~81,89A,96~97,99~101
    6868 6nu2:A
    (3.9Å)
    		 1472 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000E60BD0 RF02541 Homo
    sapiens
    9606    		 30962385
    591

    590

    M269_0.6

    1165

    1328

    1075

    M019_0.6

    175

    1199

    693

    M106_0.6

    1191

    156

    M161_0.6

    43

    M111_0.6

    s79

    546

    1271

    1395

    M272_0.6

    M013_0.6

    M081_0.6

    994

    996

    M087_0.6

    1353

    1334

    M148_0.6

    1239

    M350_0.6

    s93

    74

    161

    104

    M043_0.6

    800

    s25

    1187

    M088_0.6

    1289

    s44

    1364

    s41

    1100

    1246

    1385

    687

    M016_0.6

    s60    		 Assembly1
    rna:u:1~2 2899,2909~2910,2919
    rna:AA:649~1601 2575,2583,2610,2622
    6869 6nu2:AA
    (3.9Å)
    		 923 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000E60B73 RF00177 Homo
    sapiens
    9606    		 30962385
    1321

    886

    1302

    156

    1207

    M027_0.6

    979

    M089_0.6

    82

    495

    399

    M164_0.6

    s44

    M329_0.6

    M033_0.6

    1194

    1197

    1196

    938

    M142_0.6

    509

    1290

    1393

    994

    1216

    1312

    1316

    1273

    s14

    120

    M047_0.6

    M169_0.6

    M274_0.6

    93

    1354

    78

    17

    1186

    M331_0.6

    1241

    M143_0.6

    1364

    800

    33    		 Assembly1
    rna:A:1671~3228 1502,1548~1549,1560,1582
    6870 6nu3:A
    (4.4Å)
    		 1472 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000E60BD0 RF02541 Homo
    sapiens
    9606    		 30962385
    591

    590

    M269_0.6

    1165

    1328

    1075

    M019_0.6

    175

    1199

    693

    M106_0.6

    1191

    156

    M161_0.6

    43

    M111_0.6

    s79

    546

    1271

    1395

    M272_0.6

    M013_0.6

    M081_0.6

    994

    996

    M087_0.6

    1353

    1334

    M148_0.6

    1239

    M350_0.6

    s93

    74

    161

    104

    M043_0.6

    800

    s25

    1187

    M088_0.6

    1289

    s44

    1364

    s41

    1100

    1246

    1385

    687

    M016_0.6

    s60    		 Assembly1
    rna:u:1~2 2909~2910,2919
    rna:AA:649~1601 2582~2583,2610~2611,2622
    6871 6nu3:AA
    (4.4Å)
    		 923 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000E60B73 RF00177 Homo
    sapiens
    9606    		 30962385
    1321

    886

    1302

    156

    1207

    M027_0.6

    979

    M089_0.6

    82

    495

    399

    M164_0.6

    s44

    M329_0.6

    M033_0.6

    1194

    1197

    1196

    938

    M142_0.6

    509

    1290

    1393

    994

    1216

    1312

    1316

    1273

    s14

    120

    M047_0.6

    M169_0.6

    M274_0.6

    93

    1354

    78

    17

    1186

    M331_0.6

    1241

    M143_0.6

    1364

    800

    33    		 Assembly1
    rna:A:1671~3228 1548~1549,1560,1582
    6872 6nud:H
    (3.5Å)
    		 40 N/A URS0000E60BD8 N/A Streptococcus
    thermophilus
    1308    		 30814678 Assembly1
    rna:U:1~28 10,12~13,17~19,23~24,27,29~30,
    35~36
    6873 6nud:U
    (3.5Å)
    		 28 N/A URS0000E60BC0 N/A Streptococcus
    thermophilus
    1308    		 30814678 Assembly1
    rna:H:1~40 2,7,9,11,13~14,19~21,25~27
    6874 6nuo:QA
    (3.2Å)
    		 1500 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DFED RF00177 Thermus
    thermophilus
    HB8
    300852    		 33016876 Assembly1
    rna:QV:1~76 790,966,1229~1230,1338~1340,14
    00
    rna:QX:1~19 693,723,788,926,1400,1402,1498
    ,1503,1505
    rna:RA:6~2906 702,783~784,899,1407~1409,1418
    ,1429,1443,1473~1475,1483~1484
    ,1492~1495,1517
    6875 6nuo:QV
    (3.2Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00001DEEBE RF00005 Escherichia
    coli
    562    		 33016876 Assembly1
    rna:QA:5~1531 30~31,34,38~42
    rna:QX:1~19 35~37
    rna:RA:6~2906 3,11~12,24~25,74~76
    6876 6nuo:QX
    (3.2Å)
    		 19 N/A N/A N/A Escherichia
    coli
    562    		 33016876 Assembly1
    rna:QA:5~1531 5~6,12~18
    rna:QV:1~76 16~18
    6877 6nuo:RA
    (3.2Å)
    		 2881 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001698E8 RF02541 Thermus
    thermophilus
    HB8
    300852    		 33016876 Assembly1
    rna:QA:5~1531 1736,1747~1751,1863,1867~1868,
    1877,1879,1934~1935,1937~1938,
    1941~1942,1969~1970,1981~1983,
    2874
    rna:QV:1~76 1930~1931,1944~1945,2263~2265,
    2267,2597,2613~2614
    rna:RB:1~119 908~910,961,963~965,1003
    6878 6nuo:RB
    (3.2Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00005F2F4B RF00001 Thermus
    thermophilus
    HB8
    300852    		 33016876 Assembly1
    rna:RA:6~2906 78~81,89B,96~100
    6879 6nuo:XA
    (3.2Å)
    		 1500 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DFED RF00177 Thermus
    thermophilus
    HB8
    300852    		 33016876 Assembly2
    rna:XV:1~76 790,966,1229,1338~1340
    rna:XX:1~19 693,723,788~789,926,1400~1402,
    1498,1503,1505~1506
    rna:YA:6~2906 702,783~784,899,1407~1409,1418
    ,1429,1443,1473~1475,1483~1485
    ,1492~1496,1517
    6880 6nuo:XV
    (3.2Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00001DEEBE RF00005 Escherichia
    coli
    562    		 33016876 Assembly2
    rna:XA:5~1531 30~31,34,38,41
    rna:XX:1~19 34~37
    rna:YA:6~2906 11~13,24~25,74~76
    6881 6nuo:XX
    (3.2Å)
    		 19 N/A N/A N/A Escherichia
    coli
    562    		 33016876 Assembly2
    rna:XA:5~1531 7,12~19
    rna:XV:1~76 16~18
    6882 6nuo:YA
    (3.2Å)
    		 2883 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001698E8 RF02541 Thermus
    thermophilus
    HB8
    300852    		 33016876 Assembly2
    rna:XA:5~1531 1736,1747~1751,1863,1867~1868,
    1877,1879,1934~1935,1937~1938,
    1941~1942,1969~1970,1981~1983,
    2873~2874
    rna:XV:1~76 1929~1931,1944~1946,2086,2263~
    2265,2451,2463,2597,2613~2614
    rna:YB:1~119 908~910,961,963~965
    6883 6nuo:YB
    (3.2Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00005F2F4B RF00001 Thermus
    thermophilus
    HB8
    300852    		 33016876 Assembly2
    rna:YA:6~2906 78~81,97~101
    6884 6nwy:QA
    (3.5Å)
    		 1511 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DFED RF00177 Thermus
    thermophilus
    HB8
    300852    		 33016876 Assembly1
    rna:QV:1~76 693,789,966,1229~1230,1338~134
    0
    rna:QX:1~19 693,723,789,926,1503,1505,1532
    ~1542
    rna:RA:6~2897 702,899,1407~1408,1418,1429,14
    40D,1474~1475,1483~1485,1493~1
    496,1517
    6885 6nwy:QV
    (3.5Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00001DEEBE RF00005 Escherichia
    coli
    562    		 33016876 Assembly1
    rna:QA:5~1542 30~31,34,37,40~41
    rna:QX:1~19 35~37
    rna:RA:6~2897 3~4,19,56,70~71,76
    6886 6nwy:QX
    (3.5Å)
    		 19 N/A N/A N/A Escherichia
    coli
    562    		 33016876 Assembly1
    rna:QA:5~1542 2,4~19
    rna:QV:1~76 16~17
    6887 6nwy:RA
    (3.5Å)
    		 2882 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001698E8 RF02541 Thermus
    thermophilus
    HB8
    300852    		 33016876 Assembly1
    rna:QA:5~1542 1689,1701,1703~1704,1831,1846,
    1848,1912~1913,1916,1919~1920,
    1947~1948,1959~1961,2863~2864
    rna:QV:1~76 1850~1851,1892~1893,2111,2120,
    2169,2394~2395,2421~2422,2432
    rna:RB:1~119 861~864,915,917~919,958
    6888 6nwy:RB
    (3.5Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00005F2F4B RF00001 Thermus
    thermophilus
    HB8
    300852    		 33016876 Assembly1
    rna:RA:6~2897 78~80,88,89B,96~97,99~100
    6889 6nwy:XA
    (3.5Å)
    		 1515 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DFED RF00177 Thermus
    thermophilus
    HB8
    300852    		 33016876 Assembly2
    rna:XV:1~76 693,789,966~967,1229,1338~1340
    rna:XX:1~19 693,926~927,1503,1532~1533,153
    5~1541
    rna:YA:6~2897 702,784,899~900,1407~1409,1418
    ,1429,1440D,1473~1474,1483~148
    4,1492,1494~1495,1517
    6890 6nwy:XV
    (3.5Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00001DEEBE RF00005 Escherichia
    coli
    562    		 33016876 Assembly2
    rna:XA:5~1542 30,34,37,40~41
    rna:XX:1~19 34~37
    rna:YA:6~2897 3,19~20,56,70~71,76
    6891 6nwy:XX
    (3.5Å)
    		 19 N/A N/A N/A Escherichia
    coli
    562    		 33016876 Assembly2
    rna:XA:5~1542 4~16,18~19
    rna:XV:1~76 16~18
    6892 6nwy:YA
    (3.5Å)
    		 2883 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001698E8 RF02541 Thermus
    thermophilus
    HB8
    300852    		 33016876 Assembly2
    rna:XA:5~1542 1701~1704,1831~1832,1836~1837,
    1846,1848,1912~1913,1915~1916,
    1919~1920,1947~1948,1959~1961,
    2863
    rna:XV:1~76 1850~1851,1892~1893,2111~2112,
    2169,2394~2395,2421~2422
    rna:YB:1~119 861~864,915,917~919,958
    6893 6nwy:YB
    (3.5Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00005F2F4B RF00001 Thermus
    thermophilus
    HB8
    300852    		 33016876 Assembly2
    rna:YA:6~2897 78~81,89B,96~97,99~100
    6894 6o1o:M
    (3.8Å)
    		 36 N/A URS0000EEAD21 N/A Thermus
    thermophilus
    274    		 31278272 Assembly1
    rna:N:8~37 6~7,9~13,15~19,21~25,27~30,32
    6895 6o1o:N
    (3.8Å)
    		 30 N/A URS0000EEACF6 N/A Thermus
    thermophilus
    274    		 31278272 Assembly1
    rna:M:-3~32 10~16,18~22,24~28,30~34,37
    6896 6o3m:QA
    (3.97Å)
    		 1500 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080DFED RF00177 Thermus
    thermophilus
    HB8
    300852    		 33016876 Assembly1
    rna:QV:1~77 790,966,1229~1230,1338~1340,14
    00
    rna:QX:4~22 693,723,788,926,1400~1401,1493
    ,1498,1503,1505
    rna:RA:6~2897 702,783~784,899,1407~1409,1418
    ,1429,1443,1474,1483~1485,1492
    ~1496,1517
    6897 6o3m:QV
    (3.97Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00001DEEBE RF00005 Escherichia
    coli
    562    		 33016876 Assembly1
    rna:QA:5~1531 31~33,35,39~42
    rna:QX:4~22 36~38
    rna:RA:6~2897 3,12,25,75~77
    6898 6o3m:QX
    (3.97Å)
    		 19 N/A N/A N/A Escherichia
    coli
    562    		 33016876 Assembly1
    rna:QA:5~1531 9~10,15~22
    rna:QV:1~77 19~21
    6899 6o3m:RA
    (3.97Å)
    		 2882 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00001698E8 RF02541 Thermus
    thermophilus
    HB8
    300852    		 33016876 Assembly1
    rna:QA:5~1531 1703~1704,1836~1837,1846,1848,
    1912~1913,1915~1916,1919~1920,
    1947~1948,1959~1961,2864
    rna:QV:1~77 1907~1908,1923,2064,2251~2253,
    2255,2451,2585,2601~2602
    rna:RB:1~119 861~864,915~919,958
    6900 6o3m:RB
    (3.97Å)
    		 120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00005F2F4B RF00001 Thermus
    thermophilus
    HB8
    300852    		 33016876 Assembly1
    rna:RA:6~2897 78~81,89A,97,99~100
    << < 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 > >>
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    Reference:
  • Chengxin Zhang, Lydia Freddolino (2024) "FURNA: a database for function annotations of RNA structures," PLOS Biology 22(7): e3002476.