| # | PDB (Resolution) |
Length | EC number & GO term |
RNAcentral | Rfam | Taxon | PubMed | ATtRACT motif |
Ligand & binding nucleotides |
|---|---|---|---|---|---|---|---|---|---|
| 6801 |
6nd6:1A (2.85Å) |
2871 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
URS00001698E8 | RF02540 RF02541 RF00002 |
Thermus thermophilus HB8 300852 |
30733327 | Assembly1 rna:1B:1~120 861~864,915,917~919,958 rna:1a:4~1533 1689,1700~1704,1832,1836~1837, 1846,1848,1912~1913,1915~1916, 1919~1920,1947~1948,1959~1961, 2863~2864 rna:1w:1~76 882,897,1913,1916,1942,2470,24 82~2483,2506~2508,2553,2555,25 73,2583~2585,2602 rna:1x:2~76 1907~1909,1922~1924,2251~2253, 2450~2451,2601~2602 rna:1y:1~76 1851,2112,2169,2394~2395,2421~ 2422 |
|
| 6802 |
6nd6:1B (2.85Å) |
120 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
URS000080DEE8 | RF00001 | Thermus thermophilus HB8 300852 |
30733327 | Assembly1 rna:1A:6~2897 78~81,90,97~102 |
|
| 6803 |
6nd6:1a (2.85Å) |
1500 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
URS000080DFED | RF00177 RF01959 RF01960 |
Thermus thermophilus HB8 300852 |
30733327 | Assembly1 rna:1A:6~2897 702,783~784,899~900,1407~1409, 1418,1429,1442A,1473~1475,1483 ~1485,1494~1496,1517 rna:1v:12~24 530,926,1196,1397,1400~1401,14 93,1498,1503,1505,1507 rna:1w:1~76 530,1054,1493 rna:1x:2~76 790,966,1229~1230,1338~1340,14 00 |
|
| 6804 |
6nd6:1v (2.85Å) |
13 | N/A | N/A | N/A | Tequatrovirus T4 10665 |
30733327 | Assembly1 rna:1a:4~1533 13,15~24 rna:1w:1~76 19~22 rna:1x:2~76 16~18 |
|
| 6805 |
6nd6:1w (2.85Å) |
73 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS00003179F7 | RF00005 | Escherichia coli 562 |
30733327 | Assembly1 rna:1A:6~2897 12,19,37~38,55~56,64,71,74~76 rna:1a:4~1533 34~37 rna:1v:12~24 34~37 |
|
| 6806 |
6nd6:1x (2.85Å) |
76 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS000041AF00 | RF00005 | Escherichia coli 562 |
30733327 | Assembly1 rna:1A:6~2897 11~13,24~25,74~76 rna:1a:4~1533 29~32,34,38,40~41 rna:1v:12~24 34~37 |
|
| 6807 |
6nd6:1y (2.85Å) |
74 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS00003179F7 | RF00005 | Escherichia coli 562 |
30733327 | Assembly1 rna:1A:6~2897 19,56,72,76 |
|
| 6808 |
6nd6:2A (2.85Å) |
2800 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
URS00001698E8 | RF02540 RF02541 RF00002 |
Thermus thermophilus HB8 300852 |
30733327 | Assembly2 rna:2B:1~120 861~864,915,917~918,958 rna:2a:4~1532 1689,1700~1704,1832,1836~1837, 1846,1848,1912~1917,1919~1920, 1947~1948,1959~1961,2863~2864 rna:2w:1~76 881~882,896~897,1913,1916,1942 ,2482~2483,2506~2507,2553,2555 ,2583~2585,2602 rna:2x:2~76 1907~1909,1922~1924,2064,2251~ 2253,2439,2450~2451,2601~2602 rna:2y:1~76 1851,2112,2169,2394~2395,2421~ 2422 |
|
| 6809 |
6nd6:2B (2.85Å) |
120 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
URS000080DEE8 | RF00001 | Thermus thermophilus HB8 300852 |
30733327 | Assembly2 rna:2A:6~2897 78~81,90,97~98,100~102 |
|
| 6810 |
6nd6:2a (2.85Å) |
1503 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
URS000080DFED | RF00177 RF01959 RF01960 |
Thermus thermophilus HB8 300852 |
30733327 | Assembly2 rna:2A:6~2897 702,783~784,899~900,1407~1410, 1418,1429,1442A,1473~1475,1483 ~1484,1493~1496,1517 rna:2v:12~24 926,1397,1400~1402,1493,1498,1 503,1505~1507 rna:2w:1~76 530,1054,1493 rna:2x:2~76 790,966,1229~1230,1338~1340 rna:2y:1~76 693~695 |
|
| 6811 |
6nd6:2v (2.85Å) |
13 | N/A | N/A | N/A | Tequatrovirus T4 10665 |
30733327 | Assembly2 rna:2a:4~1532 12~13,15~19,22~23 rna:2w:1~76 19~22 rna:2x:2~76 16~18 |
|
| 6812 |
6nd6:2w (2.85Å) |
73 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS00003179F7 | RF00005 | Escherichia coli 562 |
30733327 | Assembly2 rna:2A:6~2897 13,19,37,55~56,64,71,74~76 rna:2a:4~1532 34~35,37 rna:2v:12~24 34~37 |
|
| 6813 |
6nd6:2x (2.85Å) |
76 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS000041AF00 | RF00005 | Escherichia coli 562 |
30733327 | Assembly2 rna:2A:6~2897 11~13,24~25,74~76 rna:2a:4~1532 30~32,34,38,40~41 rna:2v:12~24 34~37 |
|
| 6814 |
6nd6:2y (2.85Å) |
73 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS00003179F7 | RF00005 | Escherichia coli 562 |
30733327 | Assembly2 rna:2A:6~2897 19,56,72,76 rna:2a:4~1532 37~38 |
|
| 6815 |
6ndk:QA (3.64Å) |
1500 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
URS000080DFED | RF00177 RF01959 RF01960 |
Thermus thermophilus HB8 300852 |
30782843 | Assembly1 rna:QV:1~76 790,966,1229~1230,1338~1340,14 00 rna:QX:16~23 530,926,1196,1397,1400~1402,14 92~1493,1498,1505 rna:QY:29~42 530,1054,1493 rna:RA:6~2897 702,784,899,1407~1409,1418,142 9~1430,1442B,1473~1475,1483~14 85,1493~1496,1517 |
|
| 6816 |
6ndk:QV (3.64Å) |
77 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS000041AF00 | RF00005 | Escherichia coli 562 |
30782843 | Assembly1 rna:QA:4~1533 29~32,34,38~41 rna:QX:16~23 34~37 rna:RA:6~2897 12~13,24~25,74~76 |
|
| 6817 |
6ndk:QY (3.64Å) |
14 | N/A | URS0000E60B7D | N/A | Salmonella enterica subsp. enterica serovar Typhimurium 90371 |
30782843 | Assembly1 rna:QA:4~1533 34~35,37 rna:QX:16~23 34~37 rna:RA:6~2897 37~38 |
|
| 6818 |
6ndk:RA (3.64Å) |
2870 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
URS00001698E8 | RF02540 RF02541 RF00002 |
Thermus thermophilus HB8 300852 |
30782843 | Assembly1 rna:QA:4~1533 1689,1700~1704,1831~1832,1836~ 1837,1846,1848,1912~1913,1916, 1919~1920,1947~1948,1959~1961, 2863~2864 rna:QV:1~76 1907~1908,1922~1924,2063~2064, 2251~2253,2439,2450~2451,2601~ 2602 rna:RB:1~120 861~864,915,917~919,958 rna:ZA:1~3 2451~2452,2506~2507,2553,2555, 2583~2584,2602 |
|
| 6819 |
6ndk:RB (3.64Å) |
120 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
URS00005F2F4B | RF00001 | Thermus thermophilus HB8 300852 |
30782843 | Assembly1 rna:RA:6~2897 78~81,88,90,98,100~102 |
|
| 6820 |
6ndk:XA (3.64Å) |
1504 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
URS000080DFED | RF00177 RF01959 RF01960 |
Thermus thermophilus HB8 300852 |
30782843 | Assembly2 rna:XV:1~76 790,966,1229~1230,1338~1340,14 00 rna:XX:13~23 530,693,926,1397,1400~1401,140 3,1492~1493,1498,1506 rna:XY:28~43 530,1054,1493 rna:YA:6~2897 702,783~784,899~900,1407~1409, 1418,1429~1430,1442B,1473~1475 ,1483~1484,1494~1496,1517 |
|
| 6821 |
6ndk:XV (3.64Å) |
77 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS000041AF00 | RF00005 | Escherichia coli 562 |
30782843 | Assembly2 rna:XA:4~1533 29~32,34,38,40~41 rna:XX:13~23 34~37 rna:YA:6~2897 11~13,24~25,74~76 |
|
| 6822 |
6ndk:XX (3.64Å) |
11 | N/A | N/A | N/A | Escherichia coli 562 |
30782843 | Assembly2 rna:XA:4~1533 13,15~21,23 rna:XV:1~76 16~18 rna:XY:28~43 19~22 |
|
| 6823 |
6ndk:XY (3.64Å) |
16 | N/A | URS0000E60B7D | N/A | Salmonella enterica subsp. enterica serovar Typhimurium 90371 |
30782843 | Assembly2 rna:XA:4~1533 34~37 rna:XX:13~23 34~37 rna:YA:6~2897 37~38 |
|
| 6824 |
6ndk:YA (3.64Å) |
2870 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
URS00001698E8 | RF02540 RF02541 RF00002 |
Thermus thermophilus HB8 300852 |
30782843 | Assembly2 rna:XA:4~1533 1689,1701~1704,1831~1832,1836~ 1837,1846,1848,1912,1915~1916, 1919~1920,1947~1949,1959~1961, 2863~2864 rna:XV:1~76 1908~1909,1922~1924,2251~2252, 2439,2450~2451,2601~2602 rna:YB:1~120 861~864,915~918,958 rna:ZB:1~3 2451,2505~2507,2553,2555,2573, 2583~2584,2602 |
|
| 6825 |
6ndk:YB (3.64Å) |
120 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
URS00005F2F4B | RF00001 | Thermus thermophilus HB8 300852 |
30782843 | Assembly2 rna:YA:6~2897 78~81,90,98,100~101 |
|
| 6826 |
6nit:C (3.8Å) |
18 | N/A | URS000036142B | N/A | Homo sapiens 9606 |
31353209 | ![]() M175_0.6 |
Assembly1 rna:E:2~23 2~8,13~20 |
| 6827 |
6nit:D (3.8Å) |
13 | N/A | URS000036142B | N/A | Homo sapiens 9606 |
31353209 | ![]() M175_0.6 |
Assembly2 rna:F:2~23 2~9,15 |
| 6828 |
6nit:E (3.8Å) |
21 | N/A | URS0000EEACE8 | N/A | synthetic construct 32630 |
31353209 | Assembly1 rna:C:1~20 2~9,14~20 |
|
| 6829 |
6nit:F (3.8Å) |
20 | N/A | URS0000EEACE8 | N/A | synthetic construct 32630 |
31353209 | Assembly2 rna:D:1~16 7,12~20 |
|
| 6830 |
6nsh:QA (3.397Å) |
1511 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
URS000080DFED | RF00177 RF01959 RF01960 |
Thermus thermophilus HB8 300852 |
33016876 | Assembly1 rna:RA:6~2897 702,784,899,1407~1409,1418,142 9,1443,1473~1475,1483~1484,149 2~1496,1517 rna:QV:27~43 790,966,1229~1230,1338~1340,14 00 rna:QX:2~19 693,723,926,1400~1403,1498,150 3,1505,1532~1537,1539,1541~154 2 |
|
| 6831 |
6nsh:QV (3.397Å) |
17 | N/A | URS00021ED980 | N/A | Escherichia coli 562 |
33016876 | Assembly1 rna:QA:5~1542 30~31,34,38~42 rna:QX:2~19 35~37 |
|
| 6832 |
6nsh:QX (3.397Å) |
18 | N/A | N/A | N/A | Escherichia coli 562 |
33016876 | Assembly1 rna:QA:5~1542 2,5,7~14,16~19 rna:QV:27~43 17~19 |
|
| 6833 |
6nsh:RA (3.397Å) |
2881 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
URS00001698E8 | RF02540 RF02541 RF00002 |
Thermus thermophilus HB8 300852 |
33016876 | Assembly1 rna:RB:1~119 861~864,915~919,958 rna:QA:5~1542 1689,1700~1704,1832,1836~1837, 1846,1848,1912~1914,1916,1919~ 1920,1947~1949,1959~1961,2863~ 2864 |
|
| 6834 |
6nsh:RB (3.397Å) |
120 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
URS00005F2F4B | RF00001 | Thermus thermophilus HB8 300852 |
33016876 | Assembly1 rna:RA:6~2897 78~81,89A,97,99~100 |
|
| 6835 |
6nsh:XA (3.397Å) |
1511 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
URS000080DFED | RF00177 RF01959 RF01960 |
Thermus thermophilus HB8 300852 |
33016876 | Assembly2 rna:YA:6~2897 702,783~784,899,1407~1408,1418 ,1429,1443,1473~1475,1483~1484 ,1492~1496,1517 rna:XV:28~42 790,966,1229~1230,1338~1340,14 00 rna:XX:1~19 693,723,789,926,1400~1401,1493 ,1498,1505~1506,1533,1535,1537 ~1542 |
|
| 6836 |
6nsh:XV (3.397Å) |
15 | N/A | URS00021ED980 | N/A | Escherichia coli 562 |
33016876 | Assembly2 rna:XA:5~1542 29~32,34,38,40~41 rna:XX:1~19 35~37 |
|
| 6837 |
6nsh:XX (3.397Å) |
19 | N/A | N/A | N/A | Escherichia coli 562 |
33016876 | Assembly2 rna:XA:5~1542 1~2,4~10,13~19 rna:XV:28~42 16~17 |
|
| 6838 |
6nsh:YA (3.397Å) |
2883 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
URS00001698E8 | RF02540 RF02541 RF00002 |
Thermus thermophilus HB8 300852 |
33016876 | Assembly2 rna:YB:1~119 861~864,915,917~919,958 rna:XA:5~1542 1689,1700~1704,1832,1836~1837, 1846,1848,1912~1913,1916,1919~ 1920,1947~1948,1959~1961,2863~ 2864 |
|
| 6839 |
6nsh:YB (3.397Å) |
120 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
URS00005F2F4B | RF00001 | Thermus thermophilus HB8 300852 |
33016876 | Assembly2 rna:YA:6~2897 78~81,89A,96~97,99~101 |
|
| 6840 |
6nta:QA (3.1Å) |
1500 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
URS000080DFED | RF00177 RF01959 RF01960 |
Thermus thermophilus HB8 300852 |
33016876 | Assembly1 rna:QV:27~43 790,966,1229~1230,1338~1340,14 00 rna:QX:10~19 693,788~789,926,1400,1402~1403 ,1493,1498,1505~1506 rna:RA:6~2897 702,784,899,1407~1408,1418,142 9,1443,1473~1475,1483~1484,149 2~1496,1517 |
|
| 6841 |
6nta:QV (3.1Å) |
17 | N/A | URS00021ED980 | N/A | Escherichia coli 562 |
33016876 | Assembly1 rna:QA:5~1531 30~32,34,38~42 rna:QX:10~19 34~37 |
|
| 6842 |
6nta:QX (3.1Å) |
10 | N/A | N/A | N/A | Escherichia coli 562 |
33016876 | Assembly1 rna:QA:5~1531 13~19 rna:QV:27~43 16~18 |
|
| 6843 |
6nta:RA (3.1Å) |
2881 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
URS00001698E8 | RF02540 RF02541 RF00002 |
Thermus thermophilus HB8 300852 |
33016876 | Assembly1 rna:QA:5~1531 1689,1700~1704,1832,1836~1837, 1846,1848,1912~1913,1916,1919~ 1920,1947~1948,1959~1961,2863~ 2864 rna:RB:1~119 861~864,915~919,958 |
|
| 6844 |
6nta:RB (3.1Å) |
120 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
URS00005F2F4B | RF00001 | Thermus thermophilus HB8 300852 |
33016876 | Assembly1 rna:RA:6~2897 78~81,89A,97,99~101 |
|
| 6845 |
6nta:XA (3.1Å) |
1500 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
URS000080DFED | RF00177 RF01959 RF01960 |
Thermus thermophilus HB8 300852 |
33016876 | Assembly2 rna:XV:28~42 790,966,1229,1338~1340,1400 rna:XX:8~19 693,788~789,926,1400~1401,1493 ,1498,1505~1506 rna:YA:6~2897 702,783~784,899,1407~1409,1418 ,1429,1443,1473~1475,1483~1484 ,1492~1496,1517 |
|
| 6846 |
6nta:XV (3.1Å) |
15 | N/A | URS00021ED980 | N/A | Escherichia coli 562 |
33016876 | Assembly2 rna:XA:5~1531 30~32,34,38~41 rna:XX:8~19 34~37 |
|
| 6847 |
6nta:XX (3.1Å) |
12 | N/A | N/A | N/A | Escherichia coli 562 |
33016876 | Assembly2 rna:XA:5~1531 13~19 rna:XV:28~42 16~18 |
|
| 6848 |
6nta:YA (3.1Å) |
2883 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
URS00001698E8 | RF02540 RF02541 RF00002 |
Thermus thermophilus HB8 300852 |
33016876 | Assembly2 rna:XA:5~1531 1689,1700~1704,1832,1836~1837, 1846,1848,1912~1913,1915~1916, 1919~1920,1947~1948,1959~1961, 2863~2864 rna:YB:1~119 861~864,915,917~919,958 |
|
| 6849 |
6nta:YB (3.1Å) |
120 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
URS00005F2F4B | RF00001 | Thermus thermophilus HB8 300852 |
33016876 | Assembly2 rna:YA:6~2897 78~81,89A,96~97,99~101 |
|
| 6850 |
6nu2:A (3.9Å) |
1472 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
URS0000E60BD0 | RF02541 RF02540 |
Homo sapiens 9606 |
30962385 | ![]() 591 ![]() 590 ![]() M269_0.6 ![]() 1165 ![]() 1328 ![]() 1075 ![]() M019_0.6 ![]() 175 ![]() 1199 ![]() 693 ![]() M106_0.6 ![]() 1191 ![]() 156 ![]() M161_0.6 ![]() 43 ![]() M111_0.6 ![]() s79 ![]() 546 ![]() 1271 ![]() 1395 ![]() M272_0.6 ![]() M013_0.6 ![]() M081_0.6 ![]() 994 ![]() 996 ![]() M087_0.6 ![]() 1353 ![]() 1334 ![]() M148_0.6 ![]() 1239 ![]() M350_0.6 ![]() s93 ![]() 74 ![]() 161 ![]() 104 ![]() M043_0.6 ![]() 800 ![]() s25 ![]() 1187 ![]() M088_0.6 ![]() 1289 ![]() s44 ![]() 1364 ![]() s41 ![]() 1100 ![]() 1246 ![]() 1385 ![]() 687 ![]() M016_0.6 ![]() s60 |
Assembly1 rna:u:1~2 2899,2909~2910,2919 rna:AA:649~1601 2575,2583,2610,2622 |
| 6851 |
6nu2:AA (3.9Å) |
923 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
URS0000E60B73 | RF00177 | Homo sapiens 9606 |
30962385 | ![]() 1321 ![]() 886 ![]() 1302 ![]() 156 ![]() 1207 ![]() M027_0.6 ![]() 979 ![]() M089_0.6 ![]() 82 ![]() 495 ![]() 399 ![]() M164_0.6 ![]() s44 ![]() M329_0.6 ![]() M033_0.6 ![]() 1194 ![]() 1197 ![]() 1196 ![]() 938 ![]() M142_0.6 ![]() 509 ![]() 1290 ![]() 1393 ![]() 994 ![]() 1216 ![]() 1312 ![]() 1316 ![]() 1273 ![]() s14 ![]() 120 ![]() M047_0.6 ![]() M169_0.6 ![]() M274_0.6 ![]() 93 ![]() 1354 ![]() 78 ![]() 17 ![]() 1186 ![]() M331_0.6 ![]() 1241 ![]() M143_0.6 ![]() 1364 ![]() 800 ![]() 33 |
Assembly1 rna:A:1671~3228 1502,1548~1549,1560,1582 |
| 6852 |
6nu3:A (4.4Å) |
1472 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
URS0000E60BD0 | RF02541 RF02540 |
Homo sapiens 9606 |
30962385 | ![]() 591 ![]() 590 ![]() M269_0.6 ![]() 1165 ![]() 1328 ![]() 1075 ![]() M019_0.6 ![]() 175 ![]() 1199 ![]() 693 ![]() M106_0.6 ![]() 1191 ![]() 156 ![]() M161_0.6 ![]() 43 ![]() M111_0.6 ![]() s79 ![]() 546 ![]() 1271 ![]() 1395 ![]() M272_0.6 ![]() M013_0.6 ![]() M081_0.6 ![]() 994 ![]() 996 ![]() M087_0.6 ![]() 1353 ![]() 1334 ![]() M148_0.6 ![]() 1239 ![]() M350_0.6 ![]() s93 ![]() 74 ![]() 161 ![]() 104 ![]() M043_0.6 ![]() 800 ![]() s25 ![]() 1187 ![]() M088_0.6 ![]() 1289 ![]() s44 ![]() 1364 ![]() s41 ![]() 1100 ![]() 1246 ![]() 1385 ![]() 687 ![]() M016_0.6 ![]() s60 |
Assembly1 rna:u:1~2 2909~2910,2919 rna:AA:649~1601 2582~2583,2610~2611,2622 |
| 6853 |
6nu3:AA (4.4Å) |
923 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
URS0000E60B73 | RF00177 | Homo sapiens 9606 |
30962385 | ![]() 1321 ![]() 886 ![]() 1302 ![]() 156 ![]() 1207 ![]() M027_0.6 ![]() 979 ![]() M089_0.6 ![]() 82 ![]() 495 ![]() 399 ![]() M164_0.6 ![]() s44 ![]() M329_0.6 ![]() M033_0.6 ![]() 1194 ![]() 1197 ![]() 1196 ![]() 938 ![]() M142_0.6 ![]() 509 ![]() 1290 ![]() 1393 ![]() 994 ![]() 1216 ![]() 1312 ![]() 1316 ![]() 1273 ![]() s14 ![]() 120 ![]() M047_0.6 ![]() M169_0.6 ![]() M274_0.6 ![]() 93 ![]() 1354 ![]() 78 ![]() 17 ![]() 1186 ![]() M331_0.6 ![]() 1241 ![]() M143_0.6 ![]() 1364 ![]() 800 ![]() 33 |
Assembly1 rna:A:1671~3228 1548~1549,1560,1582 |
| 6854 |
6nud:H (3.5Å) |
40 | N/A | URS0000E60BD8 | N/A | Streptococcus thermophilus 1308 |
30814678 | Assembly1 rna:U:1~28 10,12~13,17~19,23~24,27,29~30, 35~36 |
|
| 6855 |
6nud:U (3.5Å) |
28 | N/A | URS0000E60BC0 | N/A | Streptococcus thermophilus 1308 |
30814678 | Assembly1 rna:H:1~40 2,7,9,11,13~14,19~21,25~27 |
|
| 6856 |
6nuo:QA (3.2Å) |
1500 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
URS000080DFED | RF00177 RF01959 RF01960 |
Thermus thermophilus HB8 300852 |
33016876 | Assembly1 rna:QV:1~76 790,966,1229~1230,1338~1340,14 00 rna:QX:1~19 693,723,788,926,1400,1402,1498 ,1503,1505 rna:RA:6~2906 702,783~784,899,1407~1409,1418 ,1429,1443,1473~1475,1483~1484 ,1492~1495,1517 |
|
| 6857 |
6nuo:QV (3.2Å) |
77 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS00001DEEBE | RF00005 | Escherichia coli 562 |
33016876 | Assembly1 rna:QA:5~1531 30~31,34,38~42 rna:QX:1~19 35~37 rna:RA:6~2906 3,11~12,24~25,74~76 |
|
| 6858 |
6nuo:QX (3.2Å) |
19 | N/A | N/A | N/A | Escherichia coli 562 |
33016876 | Assembly1 rna:QA:5~1531 5~6,12~18 rna:QV:1~76 16~18 |
|
| 6859 |
6nuo:RA (3.2Å) |
2881 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
URS00001698E8 | RF02540 RF02541 RF00002 |
Thermus thermophilus HB8 300852 |
33016876 | Assembly1 rna:QA:5~1531 1736,1747~1751,1863,1867~1868, 1877,1879,1934~1935,1937~1938, 1941~1942,1969~1970,1981~1983, 2874 rna:QV:1~76 1930~1931,1944~1945,2263~2265, 2267,2597,2613~2614 rna:RB:1~119 908~910,961,963~965,1003 |
|
| 6860 |
6nuo:RB (3.2Å) |
120 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
URS00005F2F4B | RF00001 | Thermus thermophilus HB8 300852 |
33016876 | Assembly1 rna:RA:6~2906 78~81,89B,96~100 |
|
| 6861 |
6nuo:XA (3.2Å) |
1500 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
URS000080DFED | RF00177 RF01959 RF01960 |
Thermus thermophilus HB8 300852 |
33016876 | Assembly2 rna:XV:1~76 790,966,1229,1338~1340 rna:XX:1~19 693,723,788~789,926,1400~1402, 1498,1503,1505~1506 rna:YA:6~2906 702,783~784,899,1407~1409,1418 ,1429,1443,1473~1475,1483~1485 ,1492~1496,1517 |
|
| 6862 |
6nuo:XV (3.2Å) |
77 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS00001DEEBE | RF00005 | Escherichia coli 562 |
33016876 | Assembly2 rna:XA:5~1531 30~31,34,38,41 rna:XX:1~19 34~37 rna:YA:6~2906 11~13,24~25,74~76 |
|
| 6863 |
6nuo:XX (3.2Å) |
19 | N/A | N/A | N/A | Escherichia coli 562 |
33016876 | Assembly2 rna:XA:5~1531 7,12~19 rna:XV:1~76 16~18 |
|
| 6864 |
6nuo:YA (3.2Å) |
2883 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
URS00001698E8 | RF02540 RF02541 RF00002 |
Thermus thermophilus HB8 300852 |
33016876 | Assembly2 rna:XA:5~1531 1736,1747~1751,1863,1867~1868, 1877,1879,1934~1935,1937~1938, 1941~1942,1969~1970,1981~1983, 2873~2874 rna:XV:1~76 1929~1931,1944~1946,2086,2263~ 2265,2451,2463,2597,2613~2614 rna:YB:1~119 908~910,961,963~965 |
|
| 6865 |
6nuo:YB (3.2Å) |
120 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
URS00005F2F4B | RF00001 | Thermus thermophilus HB8 300852 |
33016876 | Assembly2 rna:YA:6~2906 78~81,97~101 |
|
| 6866 |
6nwy:QA (3.5Å) |
1511 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
URS000080DFED | RF00177 RF01959 RF01960 |
Thermus thermophilus HB8 300852 |
33016876 | Assembly1 rna:QV:1~76 693,789,966,1229~1230,1338~134 0 rna:QX:1~19 693,723,789,926,1503,1505,1532 ~1542 rna:RA:6~2897 702,899,1407~1408,1418,1429,14 40D,1474~1475,1483~1485,1493~1 496,1517 |
|
| 6867 |
6nwy:QV (3.5Å) |
77 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS00001DEEBE | RF00005 | Escherichia coli 562 |
33016876 | Assembly1 rna:QA:5~1542 30~31,34,37,40~41 rna:QX:1~19 35~37 rna:RA:6~2897 3~4,19,56,70~71,76 |
|
| 6868 |
6nwy:QX (3.5Å) |
19 | N/A | N/A | N/A | Escherichia coli 562 |
33016876 | Assembly1 rna:QA:5~1542 2,4~19 rna:QV:1~76 16~17 |
|
| 6869 |
6nwy:RA (3.5Å) |
2882 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
URS00001698E8 | RF02540 RF02541 RF00002 |
Thermus thermophilus HB8 300852 |
33016876 | Assembly1 rna:QA:5~1542 1689,1701,1703~1704,1831,1846, 1848,1912~1913,1916,1919~1920, 1947~1948,1959~1961,2863~2864 rna:QV:1~76 1850~1851,1892~1893,2111,2120, 2169,2394~2395,2421~2422,2432 rna:RB:1~119 861~864,915,917~919,958 |
|
| 6870 |
6nwy:RB (3.5Å) |
120 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
URS00005F2F4B | RF00001 | Thermus thermophilus HB8 300852 |
33016876 | Assembly1 rna:RA:6~2897 78~80,88,89B,96~97,99~100 |
|
| 6871 |
6nwy:XA (3.5Å) |
1515 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
URS000080DFED | RF00177 RF01959 RF01960 |
Thermus thermophilus HB8 300852 |
33016876 | Assembly2 rna:XV:1~76 693,789,966~967,1229,1338~1340 rna:XX:1~19 693,926~927,1503,1532~1533,153 5~1541 rna:YA:6~2897 702,784,899~900,1407~1409,1418 ,1429,1440D,1473~1474,1483~148 4,1492,1494~1495,1517 |
|
| 6872 |
6nwy:XV (3.5Å) |
77 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS00001DEEBE | RF00005 | Escherichia coli 562 |
33016876 | Assembly2 rna:XA:5~1542 30,34,37,40~41 rna:XX:1~19 34~37 rna:YA:6~2897 3,19~20,56,70~71,76 |
|
| 6873 |
6nwy:XX (3.5Å) |
19 | N/A | N/A | N/A | Escherichia coli 562 |
33016876 | Assembly2 rna:XA:5~1542 4~16,18~19 rna:XV:1~76 16~18 |
|
| 6874 |
6nwy:YA (3.5Å) |
2883 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
URS00001698E8 | RF02540 RF02541 RF00002 |
Thermus thermophilus HB8 300852 |
33016876 | Assembly2 rna:XA:5~1542 1701~1704,1831~1832,1836~1837, 1846,1848,1912~1913,1915~1916, 1919~1920,1947~1948,1959~1961, 2863 rna:XV:1~76 1850~1851,1892~1893,2111~2112, 2169,2394~2395,2421~2422 rna:YB:1~119 861~864,915,917~919,958 |
|
| 6875 |
6nwy:YB (3.5Å) |
120 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
URS00005F2F4B | RF00001 | Thermus thermophilus HB8 300852 |
33016876 | Assembly2 rna:YA:6~2897 78~81,89B,96~97,99~100 |
|
| 6876 |
6o1o:M (3.8Å) |
36 | N/A | URS0000EEAD21 | N/A | Thermus thermophilus 274 |
31278272 | Assembly1 rna:N:8~37 6~7,9~13,15~19,21~25,27~30,32 |
|
| 6877 |
6o1o:N (3.8Å) |
30 | N/A | URS0000EEACF6 | N/A | Thermus thermophilus 274 |
31278272 | Assembly1 rna:M:-3~32 10~16,18~22,24~28,30~34,37 |
|
| 6878 |
6o3m:QA (3.97Å) |
1500 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
URS000080DFED | RF00177 RF01959 RF01960 |
Thermus thermophilus HB8 300852 |
33016876 | Assembly1 rna:QV:1~77 790,966,1229~1230,1338~1340,14 00 rna:QX:4~22 693,723,788,926,1400~1401,1493 ,1498,1503,1505 rna:RA:6~2897 702,783~784,899,1407~1409,1418 ,1429,1443,1474,1483~1485,1492 ~1496,1517 |
|
| 6879 |
6o3m:QV (3.97Å) |
77 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS00001DEEBE | RF00005 | Escherichia coli 562 |
33016876 | Assembly1 rna:QA:5~1531 31~33,35,39~42 rna:QX:4~22 36~38 rna:RA:6~2897 3,12,25,75~77 |
|
| 6880 |
6o3m:QX (3.97Å) |
19 | N/A | N/A | N/A | Escherichia coli 562 |
33016876 | Assembly1 rna:QA:5~1531 9~10,15~22 rna:QV:1~77 19~21 |
|
| 6881 |
6o3m:RA (3.97Å) |
2882 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
URS00001698E8 | RF02540 RF02541 RF00002 |
Thermus thermophilus HB8 300852 |
33016876 | Assembly1 rna:QA:5~1531 1703~1704,1836~1837,1846,1848, 1912~1913,1915~1916,1919~1920, 1947~1948,1959~1961,2864 rna:QV:1~77 1907~1908,1923,2064,2251~2253, 2255,2451,2585,2601~2602 rna:RB:1~119 861~864,915~919,958 |
|
| 6882 |
6o3m:RB (3.97Å) |
120 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
URS00005F2F4B | RF00001 | Thermus thermophilus HB8 300852 |
33016876 | Assembly1 rna:RA:6~2897 78~81,89A,97,99~100 |
|
| 6883 |
6o3m:XA (3.97Å) |
1500 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
URS000080DFED | RF00177 RF01959 RF01960 |
Thermus thermophilus HB8 300852 |
33016876 | Assembly2 rna:XX:1~19 693,723,926,1400,1493~1494,149 8,1505~1506 rna:YA:6~2897 702,783~784,899,1407~1409,1418 ,1429,1443,1473~1475,1483~1485 ,1492~1495,1517 rna:XV:1~77 790,966,1229~1230,1338~1340,14 00 |
|
| 6884 |
6o3m:XV (3.97Å) |
77 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS00001DEEBE | RF00005 | Escherichia coli 562 |
33016876 | Assembly2 rna:XA:5~1531 31~33,35,39,41~42 rna:XX:1~19 35~38 rna:YA:6~2897 2~3,12~13,25~26,75~77 |
|
| 6885 |
6o3m:XX (3.97Å) |
19 | N/A | N/A | N/A | Escherichia coli 562 |
33016876 | Assembly2 rna:XA:5~1531 7,13,15~19 rna:XV:1~77 16~18 |
|
| 6886 |
6o3m:YA (3.97Å) |
2883 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
URS00001698E8 | RF02540 RF02541 RF00002 |
Thermus thermophilus HB8 300852 |
33016876 | Assembly2 rna:XA:5~1531 1689,1701~1704,1836~1837,1846, 1848,1912~1913,1915~1916,1919~ 1920,1947~1948,1959~1961,2863~ 2864 rna:YB:1~119 861~863,915,917~919,958 rna:XV:1~77 1908,1922~1924,2063~2064,2251~ 2253,2255,2439,2451,2601~2602 |
|
| 6887 |
6o3m:YB (3.97Å) |
120 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
URS00005F2F4B | RF00001 | Thermus thermophilus HB8 300852 |
33016876 | Assembly2 rna:YA:6~2897 78~81,89A,97,99~100 |
|
| 6888 |
6o5f:C (2.504Å) |
23 | N/A | URS000080DD89 | N/A | synthetic construct 32630 |
31300642 | Assembly1 rna:D:4~27 2~23 |
|
| 6889 |
6o5f:D (2.504Å) |
24 | N/A | URS000080DD89 | N/A | synthetic construct 32630 |
31300642 | Assembly1 rna:C:1~23 4~26 |
|
| 6890 |
6o7e:G (3.2Å) |
27 | N/A | URS0000E60B95 | N/A | Thermococcus onnurineus 342948 |
31326272 | Assembly1 rna:H:17~35 0~4,6~10,12~18 |
|
| 6891 |
6o7e:H (3.2Å) |
19 | N/A | URS0000E60BAF | N/A | Thermococcus onnurineus 342948 |
31326272 | Assembly1 rna:G:-8~18 17~18,20~24,26~34 |
|
| 6892 |
6o7h:G (2.9Å) |
27 | N/A | URS0000E60B95 | N/A | Thermococcus onnurineus NA1 523850 |
31326272 | Assembly1 rna:H:17~35 0~4,6~10,12~16,18 |
|
| 6893 |
6o7h:H (2.9Å) |
19 | N/A | URS0000E60BAF | N/A | Thermococcus onnurineus NA1 523850 |
31326272 | Assembly1 rna:G:-8~18 17,19~35 |
|
| 6894 |
6o7i:G (3.2Å) |
26 | N/A | URS0000E60B95 | N/A | Thermococcus onnurineus 342948 |
31326272 | Assembly1 rna:H:18~36 9~13,15~19,21~25 |
|
| 6895 |
6o7i:H (3.2Å) |
19 | N/A | URS0000E60BAF | N/A | Thermococcus onnurineus 342948 |
31326272 | Assembly1 rna:G:1~26 19~28,30~35 |
|
| 6896 |
6o7k:g (4.2Å) |
1539 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
URS000080DDC0 | RF00177 RF01959 RF01960 |
Escherichia coli 562 |
31108498 | Assembly1 rna:v:1~77 790,966,1229~1230,1338~1340,14 00 rna:N:13~18 693,788,926,1400,1498 |
|
| 6897 |
6o7k:v (4.2Å) |
77 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS00001BBAFC | RF00005 | Escherichia coli 562 |
31108498 | Assembly1 rna:g:2~1540 31~32,35,39~40,42 rna:N:13~18 35~38 |
|
| 6898 |
6o8w:A (3.53Å) |
2903 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
URS00021ED8EF | RF02540 RF02541 RF00002 |
Enterococcus faecalis 1351 |
33004869 | Assembly1 rna:a:3~1550 1851,1861~1862,1926~1928,1933~ 1934,1961~1962,1964,1973 rna:u:1~76 1865,1907,2126~2128,2133,2183~ 2184,2408,2435~2436 rna:B:1~116 902~904,957,959 |
|
| 6899 |
6o8w:B (3.53Å) |
116 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
URS0000240630 | RF00001 | Enterococcus faecalis 1351 |
33004869 | Assembly1 rna:A:4~2911 76~79,95,98 |
|
| 6900 |
6o8w:a (3.53Å) |
1523 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
URS00021ED8EB | RF00177 RF01959 RF01960 |
Enterococcus faecalis 1351 |
33004869 | Assembly1 rna:u:1~76 982,1353~1355 rna:A:4~2911 717,799,1422~1424,1433,1435,14 99~1500,1509~1511,1533 |
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14210 RNAs.
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Hover over Ligand to view the name of the ligand and the ligand-binding nucleotides on the RNA.
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